Pregenerated sensors for SNX18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042364Ensembl transcript IDs: ENSMUST00000109241.5
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAATGGGAGCTTGTCATCGGCTTGTCACCAACATGCCCGCCCTTTaGTCTTTCCATCAGAAACGTTGGGGGCTCGAACCCAGGTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: EMGACHRLVTNMPAL*SFHQKRWGLEPRWD Trigger: GTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATGGAAAGAGCAAAGGGCGGGCATGTTGGTGACAAGCCGATGACAAGCTCCCATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 90 bp | TCTCCCCTACGAGACTTCACATCCAGAGACGGCAGAAGCGTCTCCTaGCTCTGTAACTGCCAGCATCTTACCAGGCGATGCTTCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: SPLRDFTSRDGRSVS*LCNCQHLTRRCFLC Trigger: GCACAGGAAGCATCGCCTGGTAAGATGCTGGCAGTTACAGAGGCAGGAGACGCTTCTGCCGTCTCTGGATGTGAAGTCTCGTAGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 90 bp | TTGGCGGCAGTCCCACGTGCCTGTAGTAAAGACAGCGCCACAGGATaGCACGTCCGCCTCAGAGTTCTGAAGCACAAGGATTTGACCAGA | + |
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Preference number: 1 (lower is better) Translates to: LAAVPRACSKDSATG*HVRLRVLKHKDLTR Trigger: TCTGGTCAAATCCTTGTGCTTCAGAACTCTGAGGCGGACGTGGCATCCTGTGGCGCTGTCTTTACTACAGGCACGTGGGACTGCCGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CCA 90 bp | TTGCAATCCAAGAGAGGAAGTTGCTTTTTAAGAGAGCATGGCTTTTaGCGGCAGTCCCACGTGCCTGTAGTAAAGACAGCGCCACAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LQSKRGSCFLREHGF*RQSHVPVVKTAPQD Trigger: ATCCTGTGGCGCTGTCTTTACTACAGGCACGTGGGACTGCCGCCAAAAGCCATGCTCTCTTAAAAAGCAACTTCCTCTCTTGGATTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CCA 90 bp | CTGTACTTTGCAATCCAAGAGAGGAAGTTGCTTTTTAAGAGAGCATaGCTTTTGGCGGCAGTCCCACGTGCCTGTAGTAAAGACAGCGCC | + |
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Preference number: 1 (lower is better) Translates to: LYFAIQERKLLFKRA*LLAAVPRACSKDSA Trigger: GGCGCTGTCTTTACTACAGGCACGTGGGACTGCCGCCAAAAGCCATGCTCTCTTAAAAAGCAACTTCCTCTCTTGGATTGCAAAGTACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGGGCAGAAGCGTCTCCTaGCTCTGTAACTGCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVGRSVS*LCNCQH Trigger: ATGCTGGCAGTTACAGAGGCAGGAGACGCTTCTGCC...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CCA 90 bp | GATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCAAAGTGATGGCCACTaGTTCTCCCACCACCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DGVRCHPLFLFFIPDRIPQSDGH*FSHHPQ Trigger: CTGGGGGTGGTGGGAGAACCAGTGGCCATCACTTTG...AGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGTCCTGCCTCTGTAACTaGCAGCATCTTACCAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVSCLCN*QHLTRR Trigger: TCGCCTGGTAAGATGCTGGCAGTTACAGAGGCAGGA...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGGGGCTCGAACCCAGGTaGGACAGAAAGGAAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVGLEPR*DRKENK Trigger: CTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCC...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CAA 90 bp | TTTGCAATCCAAGAGAGGAAGTTGCTTTTTAAGAGAGCATGGCTTTaGGCGGCAGTCCCACGTGCCTGTAGTAAAGACAGCGCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: FAIQERKLLFKRAWL*AAVPRACSKDSATG Trigger: TCCTGTGGCGCTGTCTTTACTACAGGCACGTGGGACTGCCGCCAAAAGCCATGCTCTCTTAAAAAGCAACTTCCTCTCTTGGATTGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR TCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGAGTTGGCAACAGCTCTaGGAAGGCAGGTTTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVSWQQL*EGRFCS Trigger: AGAACAAAACCTGCCTTCTCAGAGCTGTTGCCAACT...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATAGAGAGCATGGCTTTTaGCGGCAGTCCCACGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SAGGSISFPLLWTLILVYREHGF*RQSHVP Trigger: AGGCACGTGGGACTGCCGCCAAAAGCCATGCTCTCT...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CAA 90 bp | CATAATTATATATCCAGCCGGTTTCGGCTGAACACAAAGCCGTCCTaGTACCACCTAGAGTTGGCAACAGCTCTGAGAAGGCAGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: HNYISSRFRLNTKPS*YHLELATALRRQVL Trigger: CAAAACCTGCCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAAGGACGGCTTTGTGTTCAGCCGAAACCGGCTGGATATATAATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGAGGCAGGTTTTGTTCTaGTGTGGAAATTATCGTTCA | + |
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Preference number: 2 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVRQVLF*CGNYRS Trigger: TGAACGATAATTTCCACAGCAGAACAAAACCTGCCT...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATCCACTCGCCTTTCCTTaGTTGACCCTTCTGCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SAGGSISFPLLWTLILVYPLAFP*LTLLQA Trigger: AGCTTGCAGAAGGGTCAAGCAAGGAAAGGCGAGTGG...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTACACCACCCCCAGAAATaGGAGCTTGTCATCGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GGSISFPLLWTLILVYDLHHPQK*ELVIGL Trigger: CAAGCCGATGACAAGCTCCCATTTCTGGGGGTGGTG...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTAAACATGCCCGCCCTTTaGTCTTTCCATCAGAAACGT | + |
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Preference number: 2 (lower is better) Translates to: GGSISFPLLWTLILVYDLNMPAL*SFHQKR Trigger: ACGTTTCTGATGGAAAGAGCAAAGGGCGGGCATGTT...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTACTTTTTAAGAGAGCATaGCTTTTGGCGGCAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GGSISFPLLWTLILVYDLLFKRA*LLAAVP Trigger: TGGGACTGCCGCCAAAAGCCATGCTCTCTTAAAAAG...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CCA 72 bp | AGTGATGGCCACTGGTTCTCCCACCACCCCCAGAAATaGGAGCTTGTCATCGGCTTGTCACCAACATGCCCG | + |
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Preference number: 3 (lower is better) Translates to: SDGHWFSHHPQK*ELVIGLSPTCP Trigger: CGGGCATGTTGGTGACAAGCCGATGACAAGCTCCCATTTCTGGGGGTGGTGGGAGAACCAGTGGCCATCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR TCA 72 bp | TCAGGCCCAATCCGTGCGACCCTTGAGTCGAGGCCGTaGACTACAGATGTGAGGGAATATGGCACACTGCCT | + |
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Preference number: 3 (lower is better) Translates to: SGPIRATLESRP*TTDVREYGTLP Trigger: AGGCAGTGTGCCATATTCCCTCACATCTGTAGTTCACGGCCTCGACTCAAGGGTCGCACGGATTGGGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 72 bp | GCTTGTCATCGGCTTGTCACCAACATGCCCGCCCTTTaGTCTTTCCATCAGAAACGTTGGGGGCTCGAACCC | + |
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Preference number: 3 (lower is better) Translates to: ACHRLVTNMPAL*SFHQKRWGLEP Trigger: GGGTTCGAGCCCCCAACGTTTCTGATGGAAAGAGCAAAGGGCGGGCATGTTGGTGACAAGCCGATGACAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 72 bp | TGTAACTGCCAGCATCTTACCAGGCGATGCTTCCTGTaGAAAGTGATGGCCACTGGTTCTCCCACCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: CNCQHLTRRCFL*KVMATGSPTTP Trigger: GGGGGTGGTGGGAGAACCAGTGGCCATCACTTTGCACAGGAAGCATCGCCTGGTAAGATGCTGGCAGTTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 72 bp | CGAGACTTCACATCCAGAGACGGCAGAAGCGTCTCCTaGCTCTGTAACTGCCAGCATCTTACCAGGCGATGC | + |
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Preference number: 3 (lower is better) Translates to: RDFTSRDGRSVS*LCNCQHLTRRC Trigger: GCATCGCCTGGTAAGATGCTGGCAGTTACAGAGGCAGGAGACGCTTCTGCCGTCTCTGGATGTGAAGTCTCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 72 bp | GTCCCACGTGCCTGTAGTAAAGACAGCGCCACAGGATaGCACGTCCGCCTCAGAGTTCTGAAGCACAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: VPRACSKDSATG*HVRLRVLKHKD Trigger: ATCCTTGTGCTTCAGAACTCTGAGGCGGACGTGGCATCCTGTGGCGCTGTCTTTACTACAGGCACGTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CCA 72 bp | TACCAGGCGATGCTTCCTGTGCAAAGTGATGGCCACTaGTTCTCCCACCACCCCCAGAAATGGGAGCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: YQAMLPVQSDGH*FSHHPQKWELV Trigger: GACAAGCTCCCATTTCTGGGGGTGGTGGGAGAACCAGTGGCCATCACTTTGCACAGGAAGCATCGCCTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR TCA 72 bp | ACTGCCGAAATCCTCAGGCCCAATCCGTGCGACCCTTaGGTCGAGGCCGTGAACTACAGATGTGAGGGAATA | + |
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Preference number: 3 (lower is better) Translates to: TAEILRPNPCDP*VEAVNYRCEGI Trigger: TATTCCCTCACATCTGTAGTTCACGGCCTCGACTCAAGGGTCGCACGGATTGGGCCTGAGGATTTCGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 72 bp | TCCAGAGACGGCAGAAGCGTCTCCTGCCTCTGTAACTaGCAGCATCTTACCAGGCGATGCTTCCTGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SRDGRSVSCLCN*QHLTRRCFLCK Trigger: TTTGCACAGGAAGCATCGCCTGGTAAGATGCTGGCAGTTACAGAGGCAGGAGACGCTTCTGCCGTCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR TCA 72 bp | CACAGAATTCACGTCAAGTCCCACGAGCCGGTGAGATaGTGCTGTGTGGTTAGGGAGGACAAACGCTATCTC | + |
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Preference number: 3 (lower is better) Translates to: HRIHVKSHEPVR*CCVVREDKRYL Trigger: GAGATAGCGTTTGTCCTCCCTAACCACACAGCATCATCTCACCGGCTCGTGGGACTTGACGTGAATTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR GCA 72 bp | GGAAGACAGGAGACCCTCCCCCAAACTAAGATGGAGTaGGTTGTCACCCACTGTTTCTGTTCTTTATCCCCG | + |
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Preference number: 3 (lower is better) Translates to: GRQETLPQTKME*VVTHCFCSLSP Trigger: CGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATCTTAGTTTGGGGGAGGGTCTCCTGTCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CCA 72 bp | TCTTTCCATCAGAAACGTTGGGGGCTCGAACCCAGGTaGGACAGAAAGGAAAACAAGCGGACTAAAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: SFHQKRWGLEPR*DRKENKRTKGT Trigger: TGTGCCTTTAGTCCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATGGAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CAA 90 bp | CCCCAAACTAAGATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGTTGTACCACCTAGAGTaGGCAACAGCTCTGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: PQTKMECVVTHCFCSLSPLYHLE*ATALRR Trigger: CCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAA...CGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATCTTAGTTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTACCCACTCGCCTTTCCTaGCTTGACCCTTCTGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: GGSISFPLLWTLILVYDLPTRLS*LDPSAS Trigger: GCTTGCAGAAGGGTCAAGCAAGGAAAGGCGAGTGGG...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CCA 72 bp | AAAAAGGAAGACAGGAGACCCTCCCCCAAACTAAGATaGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: KKEDRRPSPKLR*SALSPTVSVLY Trigger: ATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATCTTAGTTTGGGGGAGGGTCTCCTGTCTTCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR TCA 72 bp | AACAAAGAGGCAAATAAATGGGACGCTCAAATCATCTaGAACGCAGAGAGCTTGCTTCTTCAACACCAATTC | + |
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Preference number: 3 (lower is better) Translates to: NKEANKWDAQII*NAESLLLQHQF Trigger: GAATTGGTGTTGAAGAAGCAAGCTCTCTGCGTTTCAGATGATTTGAGCGTCCCATTTATTTGCCTCTTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTATTATCTCGCTGTACTTaGCAATCCAAGAGAGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: GGSISFPLLWTLILVYDLLSRCT*QSKRGS Trigger: ACTTCCTCTCTTGGATTGCAAAGTACAGCGAGATAA...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CCA 90 bp | AACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGACTAAAGACAGGTCCGAGCGGGTaGACAGGCGGTAGCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: NVGGSNPGGTERKTSGLKTGPSG*TGGSGR Trigger: CCGGCCGCTACCGCCTGTCCACCCGCTCGGACCTGT...CTTTAGTCCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR GCA 90 bp | CATCAGAAACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGTGGAAGACGTCGCACTaGGCCAGCACCGGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HQKRWGLEPRWDRKENKRWKTSH*ASTGWL Trigger: CAGCCACCCGGTGCTGGCGCAGTGCGACGTCTTCCA...CCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGGCTGCCCAGCGCGCCTaGCTCATCGGCCACCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVAAQRA*LIGHRG Trigger: TCCACGGTGGCCGATGAGCCAGGCGCGCTGGGCAGC...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CAA 72 bp | GCCACTGGTTCTCCCACCACCCCCAGAAATGGGAGCTaGTCATCGGCTTGTCACCAACATGCCCGCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ATGSPTTPRNGS*SSACHQHARPL Trigger: CAAAGGGCGGGCATGTTGGTGACAAGCCGATGACAAGCTCCCATTTCTGGGGGTGGTGGGAGAACCAGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR TCA 90 bp | AACACAAAGCCGTCCTTGTACCACCTAGAGTTGGCAACAGCTCTGAGAAGGCAGGGTCGCCGCGGCTGTTaGTCCCTTCGAGCCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NTKPSLYHLELATALRRQGRRGC*SLRASP Trigger: AGGGCTGGCTCGAAGGGATCAACAGCCGCGGCGACC...CTGCCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAAGGACGGCTTTGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR GCA 90 bp | AACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGACTAAAGAAGCGCCCGGTGGCCTaGTTCTCAGGCAGATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NVGGSNPGGTERKTSGLKKRPVA*FSGRWG Trigger: GCCCCATCTGCCTGAGAAGCAGGCCACCGGGCGCTT...CTTTAGTCCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CCA 90 bp | AACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGACTAAAGCTGTGCACGGGCACCTaGGTATGCGTGGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NVGGSNPGGTERKTSGLKLCTGT*VCVGTS Trigger: GCTGGTGCCCACGCATACCCAGGTGCCCGTGCACAG...CTTTAGTCCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR TCA 90 bp | GATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCTGGAAGGAACCGGGTaGCGCCTGCGGCTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DGVRCHPLFLFFIPDRIPLEGTG*RLRLQQ Trigger: CTGCTGCAGCCGCAGGCGTCACCCGGTTCCTTCCAG...AGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR GCA 90 bp | CTTCTCCCCTACGAGACTTCACATCCAGAGACGGCAGAAGCGTCTCCTGCCTCTGGGCAGGTCAGGAAATaGTGGAAGACGTCGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: LLPYETSHPETAEASPASGQVRK*WKTSHC Trigger: GCAGTGCGACGTCTTCCAGCATTTCCTGACCTGCCC...AGAGGCAGGAGACGCTTCTGCCGTCTCTGGATGTGAAGTCTCGTAGGGGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR GCA 90 bp | CATCAGAAACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGAGCCAGTCACCTGCTTaGGCGCAAACTCGTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: HQKRWGLEPRWDRKENKRSQSPA*AQTRWR Trigger: CCGCCAACGAGTTTGCGCGCAAGCAGGTGACTGGCT...CCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR GCA 90 bp | AACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGACTAAAGACTGGGTCCAGGTCCTaGCTGGGCTGCTCAGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: NVGGSNPGGTERKTSGLKTGSRS*LGCSAK Trigger: CTTCGCTGAGCAGCCCAGGCAGGACCTGGACCCAGT...CTTTAGTCCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR TCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGGCTCAAAGGCTTGGCTaGGACCCCGGAAGGACTGGC | + |
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Preference number: 4 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVAQRLG*DPGRTG Trigger: GCCAGTCCTTCCGGGGTCTCAGCCAAGCCTTTGAGC...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR TCA 90 bp | CATCAGAAACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGACGGAGAAGGCCTGCTaGTCCAGCTCAAAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HQKRWGLEPRWDRKENKRTEKAC*SSSKAW Trigger: CCAAGCCTTTGAGCTGGATCAGCAGGCCTTCTCCGT...CCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR GCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGCCCAGTCATCGTCGCTaGCCAGGCTGGCCTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVPSHRR*PGWPGI Trigger: GATACCAGGCCAGCCTGGGCAGCGACGATGACTGGG...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR TCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGGTGGGGTGCTCAGAGTaGGGAAGAAGTTGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVVGCSE*GRSWRP Trigger: TGGGCGCCAACTTCTTCCTCACTCTGAGCACCCCAC...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR TCA 90 bp | CATCAGAAACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGAGCTCTTCATGCCCTTaGACTTGGTCTGCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQKRWGLEPRWDRKENKRSSSCP*TWSAWW Trigger: CCACCAAGCAGACCAAGTTCAAGGGCATGAAGAGCT...CCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR TCA 90 bp | CATCAGAAACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGGACTGGCCCACCTTCTaGTACTCCTTCTTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQKRWGLEPRWDRKENKRDWPTF*YSFLKP Trigger: TGGCTTCAAGAAGGAGTATCAGAAGGTGGGCCAGTC...CCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR GCA 90 bp | AACACAAAGCCGTCCTTGTACCACCTAGAGTTGGCAACAGCTCTGAGAAGGCAGGCGGTGTGGTTGAGCTaGAACGCACTGTCGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NTKPSLYHLELATALRRQAVWLS*NALSSI Trigger: GATGGACGACAGTGCGTTGCAGCTCAACCACACCGC...CTGCCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAAGGACGGCTTTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGCAGGTCAGGAAATGCTaGAAGACGTCGCACTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVQVRKC*KTSHCA Trigger: GGCGCAGTGCGACGTCTTCCAGCATTTCCTGACCTG...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CCA 90 bp | AACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGACTAAAGAACTCGTTGGCGGTGTaGTTGAGCTGCAACGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NVGGSNPGGTERKTSGLKNSLAV*LSCNAL Trigger: CAGTGCGTTGCAGCTCAACCACACCGCCAACGAGTT...CTTTAGTCCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | AACACAAAGCCGTCCTTGTACCACCTAGAGTTGGCAACAGCTCTGAGAAGGCAGTCCAGCTCAAAGGCTTaGCTGAGACCCCGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTKPSLYHLELATALRRQSSSKA*LRPRKD Trigger: GTCCTTCCGGGGTCTCAGCCAAGCCTTTGAGCTGGA...CTGCCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAAGGACGGCTTTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR GCA 90 bp | AACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGACTAAAGCCTTCTCATCAGTGCTaGTGGGGCAGGTCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NVGGSNPGGTERKTSGLKPSHQC*WGRSGN Trigger: ATTTCCTGACCTGCCCCAGCAGCACTGATGAGAAGG...CTTTAGTCCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | AACACAAAGCCGTCCTTGTACCACCTAGAGTTGGCAACAGCTCTGAGAAGGCAGACTTGGTCTGCTTGGTaGGGTCGTCGATGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NTKPSLYHLELATALRRQTWSAW*GRRWCT Trigger: AGTGCACCATCGACGACCCCACCAAGCAGACCAAGT...CTGCCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAAGGACGGCTTTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGGCACCTGGGTATGCGTaGGCACCAGCTTGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVAPGYA*APACKR Trigger: TCTCTTACAAGCTGGTGCCCACGCATACCCAGGTGC...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | GATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTTGCTTCTCAGGCAGATaGGGCACCGAGATGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGVRCHPLFLFFIPDRIPCFSGR*GTEMTG Trigger: CCCAGTCATCTCGGTGCCCCATCTGCCTGAGAAGCA...AGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| 3UTR CAA 72 bp | GACAGGAGACCCTCCCCCAAACTAAGATGGAGTGCGTaGTCACCCACTGTTTCTGTTCTTTATCCCCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: DRRPSPKLRWSA*SPTVSVLYPRS Trigger: CGATCGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATCTTAGTTTGGGGGAGGGTCTCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATCCTCCCCGCCCGACTTaGCGAAGGTGGAGAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSISFPLLWTLILVYPPRPT*RRWRSD Trigger: ATCGCTTCTCCACCTTCGTCAAGTCGGGCGGGGAGG...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGCTCATCGGCCACCGTaGAGCTGTCGTCCCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSISFPLLWTLILVYAHRPP*SCRPTR Trigger: ACGAGTGGGACGACAGCTCCACGGTGGCCGATGAGC...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR TCA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGCTTTCTGAACATGGATaGTGTCTGGGAAGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVLSEHG*CLGSWP Trigger: TGGCCAACTTCCCAGACATCATCCATGTTCAGAAAG...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR TCA 90 bp | AACACAAAGCCGTCCTTGTACCACCTAGAGTTGGCAACAGCTCTGAGAAGGCAGGTAAGAGCTCCTTTCTaGACATGGATGATGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTKPSLYHLELATALRRQVRAPF*TWMMSG Trigger: CCCAGACATCATCCATGTTCAGAAAGGAGCTCTTAC...CTGCCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAAGGACGGCTTTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGGGCACCGAGATGACTaGGAATTTCTCCGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSISFPLLWTLILVYGHRDD*EFLRQA Trigger: CGCCTGGCGGAGAAATTCCCAGTCATCTCGGTGCCC...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTACAGGGCGGCGGCAGGTaGGGTGCTCAGAGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSISFPLLWTLILVYDLQGGGR*GAQSEE Trigger: TTCCTCACTCTGAGCACCCCACCTGCCGCCGCCCTG...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| 3UTR CAA 72 bp | CAAGAGAGGAAGTTGCTTTTTAAGAGAGCATGGCTTTaGGCGGCAGTCCCACGTGCCTGTAGTAAAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QERKLLFKRAWL*AAVPRACSKDS Trigger: GCTGTCTTTACTACAGGCACGTGGGACTGCCGCCAAAAGCCATGCTCTCTTAAAAAGCAACTTCCTCTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATAGGCCTTCTCATCAGTaGTGCTGGGGCAGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSISFPLLWTLILVYRPSHQ*CWGRSG Trigger: TCCTGACCTGCCCCAGCAGCACTGATGAGAAGGCCT...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTAAGGTGGAGAAGCGATTaGGGTTGCGGCTCACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSISFPLLWTLILVYDLRWRSD*GCGSPW Trigger: CCACGGTGAGCCGCAACCTCAATCGCTTCTCCACCT...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATCCCTTGAACTTGGTCTaGTTGGTGGGGTCGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSISFPLLWTLILVYPLNLV*LVGSSM Trigger: CATCGACGACCCCACCAAGCAGACCAAGTTCAAGGG...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CAA 72 bp | TGCCACGTCCGCCTCAGAGTTCTGAAGCACAAGGATTaGACCAGAGGTCAAAATGATCATCATCCGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CHVRLRVLKHKD*TRGQNDHHPFL Trigger: TAAGAACGGATGATGATCATTTTGACCTCTGGTCAAATCCTTGTGCTTCAGAACTCTGAGGCGGACGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR TCA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGTGTTACAGCGGTCTTaGATGCCGTCAGCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSISFPLLWTLILVYVLQRS*MPSAFW Trigger: CCAAAAAGCTGACGGCATTCAAGACCGCTGTAACAC...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATGATTTATCTCATCAGTGCTGCTaGGGCAGGTCAGGAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSISFPLLWTLILVYDLSHQCC*GRSGNA Trigger: AGCATTTCCTGACCTGCCCCAGCAGCACTGATGAGA...TAAATCATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| 3UTR CAA 72 bp | TTTATCTCGCTGTACTTTGCAATCCAAGAGAGGAAGTaGCTTTTTAAGAGAGCATGGCTTTTGGCGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FISLYFAIQERK*LFKRAWLLAAV Trigger: GACTGCCGCCAAAAGCCATGCTCTCTTAAAAAGCAACTTCCTCTCTTGGATTGCAAAGTACAGCGAGATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS GCA 90 bp | AAGCCGGCGCCCGGCGGCTGGAAGGAACCGGGTGACGCCTGCGGCTaGAGCAGCGGCGGGAAGGCGGCGGGTGGCGCGGCGGGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPAPGGWKEPGDACG*SSGGKAAGGAAGRG Trigger: GCCTCTGCCCGCCGCGCCACCCGCCGCCTTCCCGCCGCTGCTGCAGCCGCAGGCGTCACCCGGTTCCTTCCAGCCGCCGGGCGCCGGCTT 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CAA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGCGGTCGCCGCGGCTGTaGATCCCTTCGAGCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVRSPRL*IPSSQP Trigger: GGGCTGGCTCGAAGGGATCAACAGCCGCGGCGACCG...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CAA 90 bp | GTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTCCTTCTCCACGTGGAGAAGCGATTGAGGTaGCGGCTCACCGTGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTHCFCSLSPIGFLLLHVEKRLR*RLTVAE Trigger: CTCGGCCACGGTGAGCCGCAACCTCAATCGCTTCTC...CACGTGGAGAAGGAGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CAA 90 bp | CCCCAAACTAAGATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGGCCTCCCCGCCCGACTaGACGAAGGTGGAGAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PQTKMECVVTHCFCSLSPASPPD*TKVEKR Trigger: TCGCTTCTCCACCTTCGTCAAGTCGGGCGGGGAGGC...CGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATCTTAGTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CAA 90 bp | GATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTTTGCGCGCAAACTCGTaGGCGGTGTGGTTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DGVRCHPLFLFFIPDRIPLRANS*AVWLSC Trigger: GCAGCTCAACCACACCGCCAACGAGTTTGCGCGCAA...AGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CAA 90 bp | AACACAAAGCCGTCCTTGTACCACCTAGAGTTGGCAACAGCTCTGAGAAGGCAGTTGAACTTGGTCTGCTaGGTGGGGTCGTCGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTKPSLYHLELATALRRQLNLVC*VGSSMV Trigger: CACCATCGACGACCCCACCAAGCAGACCAAGTTCAA...CTGCCTTCTCAGAGCTGTTGCCAACTCTAGGTGGTACAAGGACGGCTTTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CAA 90 bp | GATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTATCCAGCTCAAAGGCTaGGCTGAGACCCCGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DGVRCHPLFLFFIPDRIPIQLKG*AETPEG Trigger: TCCTTCCGGGGTCTCAGCCAAGCCTTTGAGCTGGAT...AGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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| CDS-3UTR CAA 90 bp | CTTCTCCCCTACGAGACTTCACATCCAGAGACGGCAGAAGCGTCTCCTGCCTCTAGTGTTACAGCGGTCTaGAATGCCGTCAGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLPYETSHPETAEASPASSVTAV*NAVSFL Trigger: CAAAAAGCTGACGGCATTCAAGACCGCTGTAACACT...AGAGGCAGGAGACGCTTCTGCCGTCTCTGGATGTGAAGTCTCGTAGGGGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAGTGCGTTGTCACCCACTGTTTCTGTTCTTTATCCCCGATCGGATTCCTAGACCCTTCCTGCGTTaGGAGATGAAGTCCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DGVRCHPLFLFFIPDRIPRPFLR*EMKSSS Trigger: CGAAGAGGACTTCATCTCCAAACGCAGGAAGGGTCT...AGGAATCCGATCGGGGATAAAGAACAGAAACAGTGGGTGACAACGCACTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGGAGGCAGCATCAGCTTTCCACTTCTCTGGACTTTAATCTTAGTTTATAAGCCAGTCACCTGCTaGCGCGCAAACTCGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAGGSISFPLLWTLILVYKPVTC*RANSLA Trigger: CGCCAACGAGTTTGCGCGCAAGCAGGTGACTGGCTT...ATAAACTAAGATTAAAGTCCAGAGAAGTGGAAAGCTGATGCTGCCTCCTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS-3UTR CAA 90 bp | CATCAGAAACGTTGGGGGCTCGAACCCAGGTGGGACAGAAAGGAAAACAAGCGGGTCTCTTACTCTAATTaGATGGAAGTGATGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQKRWGLEPRWDRKENKRVSYSN*MEVMNL Trigger: GAGATTCATCACTTCCATCAAATTAGAGTAAGAGAC...CCGCTTGTTTTCCTTTCTGTCCCACCTGGGTTCGAGCCCCCAACGTTTCTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS CCA 72 bp | AGACGCCGCGGGAGCCCAGAGACAGGTCCGAGCGGGTaGACAGGCGGTAGCGGCCGGCCGCACCGCCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RRRGSPETGPSG*TGGSGRPHRRP Trigger: CGGGCGGCGGTGCGGCCGGCCGCTACCGCCTGTCCACCCGCTCGGACCTGTCTCTGGGCTCCCGCGGCGTCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS CCA 72 bp | CGGCTCACCGTGGCCGAGCTCTTGGCTCCAGACGCTTaGTGCGCCGGGGGCGCCGAGACGCCGCGGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLTVAELLAPDA*CAGGAETPREP Trigger: GGGCTCCCGCGGCGTCTCGGCGCCCCCGGCGCACCAAGCGTCTGGAGCCAAGAGCTCGGCCACGGTGAGCCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS CAA 72 bp | GCGGCTCACCGTGGCCGAGCTCTTGGCTCCAGACGCTaGGTGCGCCGGGGGCGCCGAGACGCCGCGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAHRGRALGSRR*VRRGRRDAAGA Trigger: GGCTCCCGCGGCGTCTCGGCGCCCCCGGCGCACCAAGCGTCTGGAGCCAAGAGCTCGGCCACGGTGAGCCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS GCA 72 bp | CTCACCGTGGCCGAGCTCTTGGCTCCAGACGCTTGGTaGGCCGGGGGCGCCGAGACGCCGCGGGAGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTVAELLAPDAW*AGGAETPREPR Trigger: TCTGGGCTCCCGCGGCGTCTCGGCGCCCCCGGCGCACCAAGCGTCTGGAGCCAAGAGCTCGGCCACGGTGAG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS CAA 90 bp | AAGGCCTCCCCGCCCGACTTGACGAAGGTGGAGAAGCGATTGAGGTaGCGGCTCACCGTGGCCGAGCTCTTGGCTCCAGACGCTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KASPPDLTKVEKRLR*RLTVAELLAPDAWC Trigger: GCACCAAGCGTCTGGAGCCAAGAGCTCGGCCACGGTGAGCCGCAACCTCAATCGCTTCTCCACCTTCGTCAAGTCGGGCGGGGAGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS CAA 72 bp | CCGCCCGACTTGACGAAGGTGGAGAAGCGATTGAGGTaGCGGCTCACCGTGGCCGAGCTCTTGGCTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPDLTKVEKRLR*RLTVAELLAPD Trigger: GTCTGGAGCCAAGAGCTCGGCCACGGTGAGCCGCAACCTCAATCGCTTCTCCACCTTCGTCAAGTCGGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS TCA 72 bp | CGAAGAGTTCGCCGATGGCGTCGTAGGCGTCTCCAGTaGAGGCAATGGCCTGATTCAGACCCACGGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRVRRWRRRRLQ*RQWPDSDPRRR Trigger: CCTTCTCCGTGGGTCTGAATCAGGCCATTGCCTTCACTGGAGACGCCTACGACGCCATCGGCGAACTCTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS CAA 72 bp | GGCCAACGTGGCGAAGGAAATAGTGTTACAGCGGTCTaGAATGCCGTCAGCTTTTTGGACCTCCATCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQRGEGNSVTAV*NAVSFLDLHLP Trigger: GGGAAGATGGAGGTCCAAAAAGCTGACGGCATTCAAGACCGCTGTAACACTATTTCCTTCGCCACGTTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
||
| CDS TCA 72 bp | GCCAACGTGGCGAAGGAAATAGTGTTACAGCGGTCTTaGATGCCGTCAGCTTTTTGGACCTCCATCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ANVAKEIVLQRS*MPSAFWTSIFP Trigger: AGGGAAGATGGAGGTCCAAAAAGCTGACGGCATTCAAGACCGCTGTAACACTATTTCCTTCGCCACGTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109241.5 |
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