Pregenerated sensors for SNX17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029146Ensembl transcript IDs: ENSMUST00000031029.15, ENSMUST00000200730.4, ENSMUST00000202124.4
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACGGCACTaGCACTGGCATCTGTGCTGGGACTGCCAATCCCCCGCAAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PHLQCPRRRNCRGRH*HWHLCWDCQSPASS Trigger: TGAGCTTGCGGGGGATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGCCGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR GCA 90 bp | CGCCAGCATCGCATTCGGGTAACACGGAAAGAGCCTTCACGGAGTTaGTGGCCTGGTAGTCGCAGCTGGAGACTGAGCTCACTGTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: RQHRIRVTRKEPSRS*WPGSRSWRLSSLLP Trigger: AGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCGTGAAGGCTCTTTCCGTGTTACCCGAATGCGATGCTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CCA 90 bp | ACACGGAAAGAGCCTTCACGGAGTTGCTGGCCTGGTAGTCGCAGCTaGAGACTGAGCTCACTGTTGCCTGCGCTCACCACAACAGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: TRKEPSRSCWPGSRS*RLSSLLPALTTTGQ Trigger: TTGCCCTGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCGTGAAGGCTCTTTCCGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CCA 90 bp | CAGCATCGCATTCGGGTAACACGGAAAGAGCCTTCACGGAGTTGCTaGCCTGGTAGTCGCAGCTGGAGACTGAGCTCACTGTTGCCTGCG | + |
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Preference number: 1 (lower is better) Translates to: QHRIRVTRKEPSRSC*PGSRSWRLSSLLPA Trigger: CGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCGTGAAGGCTCTTTCCGTGTTACCCGAATGCGATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR TCA 90 bp | AAGAGCCTTCACGGAGTTGCTGGCCTGGTAGTCGCAGCTGGAGACTaGGCTCACTGTTGCCTGCGCTCACCACAACAGGGCAATCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: KSLHGVAGLVVAAGD*AHCCLRSPQQGNPS Trigger: AGAAGGATTGCCCTGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCGTGAAGGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR TCA 90 bp | CCGGTGCTGCTCTTTGGTGACCAGGATCCAGCCATGCTCAATGTCTaGCACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: PVLLFGDQDPAMLNV*HRLSIKQVQANPVL Trigger: GAGAACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTGTCAGACATTGAGCATGGCTGGATCCTGGTCACCAAAGAGCAGCACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR GCA 90 bp | GCTGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTaGCGTGGACGGCACTGGCACTGGCATCTGTGCTGGGACTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: AEITDPHLQCPRRRN*RGRHWHWHLCWDCQ Trigger: TTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGCCGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR GCA 90 bp | GCTGAGTTTAATGATGGGGAGCTGCTCAGACCATTCACAGACCTCTaGCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATG | + |
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Preference number: 1 (lower is better) Translates to: AEFNDGELLRPFTDL*PPFAQALKSQKQPM Trigger: CATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTGAATGGTCTGAGCAGCTCCCCATCATTAAACTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR GCA 90 bp | CCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTaGTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: PPFAQALKSQKQPME*WSSSKARNNPWSVR Trigger: TCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR GCA 90 bp | CGCAAGAACTCCTTTTTGGAGACCTTCTCTTGCAGAGATTTGAGCTaGCGGTGCTGCTCTTTGGTGACCAGGATCCAGCCATGCTCAATG | + |
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Preference number: 1 (lower is better) Translates to: RKNSFLETFSCRDLS*RCCSLVTRIQPCSM Trigger: CATTGAGCATGGCTGGATCCTGGTCACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR GCA 90 bp | ATACTGCCCCCAGATTTCTTCACCATCAGCTCATCTACCATGGACTaGAGGCAGATGCTCATCATGATAGCCTGTGGGCTGGTGATGGTG | + |
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Preference number: 1 (lower is better) Translates to: ILPPDFFTISSSTMD*RQMLIMIACGLVMV Trigger: CACCATCACCAGCCCACAGGCTATCATGATGAGCATCTGCCTGCAGTCCATGGTAGATGAGCTGATGGTGAAGAAATCTGGGGGCAGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CCA 90 bp | TTGCTGAGCAGCACTTCCAAGGAAACCTCCTCTGTGGGCACCTGTTaGGTCTCCTGTTGGGCCCGACGTAGAAAGCTATTAAAAGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LLSSTSKETSSVGTC*VSCWARRRKLLKVS Trigger: TGAGACTTTTAATAGCTTTCTACGTCGGGCCCAACAGGAGACCCAACAGGTGCCCACAGAGGAGGTTTCCTTGGAAGTGCTGCTCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR TCA 90 bp | TCTGGTCAGAAGTTAGCACAGTTACCAGAACTTTCTGTCCATTGCTaGGCAGCACTTCCAAGGAAACCTCCTCTGTGGGCACCTGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: SGQKLAQLPELSVHC*AALPRKPPLWAPVG Trigger: CCCAACAGGTGCCCACAGAGGAGGTTTCCTTGGAAGTGCTGCTCAGCAATGGACAGAAAGTTCTGGTAACTGTGCTAACTTCTGACCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR GCA 90 bp | AACTCCTTTTTGGAGACCTTCTCTTGCAGAGATTTGAGCTGCCGGTaGTGCTCTTTGGTGACCAGGATCCAGCCATGCTCAATGTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: NSFLETFSCRDLSCR*CSLVTRIQPCSMSD Trigger: GTCAGACATTGAGCATGGCTGGATCCTGGTCACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAAAAAGGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CCA 90 bp | CCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTGCTaGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: PFAQALKSQKQPMEC*SSSKARNNPWSVRV Trigger: AACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CCA 90 bp | TTTTTCTCGAACAAGGAAGAGACTAAAATATCCGATCAAGTCATCTaGAAGATCCAGCTTTGCAGCCACAGCCTCCAGGACATCTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: FFSNKEETKISDQVI*KIQLCSHSLQDIFC Trigger: ACAGAAGATGTCCTGGAGGCTGTGGCTGCAAAGCTGGATCTTCCAGATGACTTGATCGGATATTTTAGTCTCTTCCTTGTTCGAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGGACTGCTCGTGCCCCCACTAGGGAGTGGCACAGAGGAGGTGACCCGCCAGTCTGTGGGCACCTGTTaGGTCTCCTGTTGGGCCCGA | + |
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Preference number: 2 (lower is better) Translates to: LGLLVPPLGSGTEEVTRQSVGTC*VSCWAR Trigger: TCGGGCCCAACAGGAGACCCAACAGGTGCCCACAGA...CTGGCGGGTCACCTCCTCTGTGCCACTCCCTAGTGGGGGCACGAGCAGTCCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR-3UTR CCA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGACGGCACTGGCACTaGCATCTGTGCTGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: HRPLPTLCPGPEKPETTHGRHWH*HLCWDC Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGCCGTCC...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | GATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACGGCAGCCCCCACTAGGGAGTaGCACAGAGGAGGTGACCCG | + |
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Preference number: 2 (lower is better) Translates to: DYRSSSPMPSKAKLPWTAAPTRE*HRGGDP Trigger: CGGGTCACCTCCTCTGTGCCACTCCCTAGTGGGGGC...TGCCGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CAA 90 bp | CGGAGTTGCTGGCCTGGTAGTCGCAGCTGGAGACTGAGCTCACTGTaGCCTGCGCTCACCACAACAGGGCAATCCTTCTCTGGAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RSCWPGSRSWRLSSL*PALTTTGQSFSGKS Trigger: TGACTTTCCAGAGAAGGATTGCCCTGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CAA 90 bp | TGCTGGGACTGCCAATCCCCCGCAAGCTCACAGCACTCAGTTTACTaGAGAGTTTCACCATGGACTCCCGGCTGGCGTCTGGTGACTCGA | + |
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Preference number: 2 (lower is better) Translates to: CWDCQSPASSQHSVY*RVSPWTPGWRLVTR Trigger: TCGAGTCACCAGACGCCAGCCGGGAGTCCATGGTGAAACTCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTGGCAGTCCCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGGAGACTGAGCTCACTGTTGCCTGCGCTCACCACAACAGGGCAATCCTTCCTTTGCCCAGGCCCTaGAAAGCCAGAAACAACCCA | + |
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Preference number: 2 (lower is better) Translates to: QLETELTVACAHHNRAILPLPRP*KARNNP Trigger: TGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGG...AAGGATTGCCCTGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCTCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAACCTCTGCCCACCCTTTaGCCAGGCCCTGAAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLVMVTHCSRSLLMRYSKPLPTL*PGPEKP Trigger: TGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGG...TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR GCA 90 bp | CTCATCATGATAGCCTGTGGGCTGGTGATGGTGACCCACTGTAGCCGGTCCTTGTGGAAGATCCAGCTTTaGAGCCACAGCCTCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LIMIACGLVMVTHCSRSLWKIQL*SHSLQD Trigger: GTCCTGGAGGCTGTGGCTGCAAAGCTGGATCTTCCA...CAAGGACCGGCTACAGTGGGTCACCATCACCAGCCCACAGGCTATCATGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCTGAACGTCTCAGGGTaGCCCCCACCCGCCGGCGCA | + |
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Preference number: 2 (lower is better) Translates to: KSQKQPMECWSSSKARNNLNVSG*PPPAGA Trigger: TGCGCCGGCGGGTGGGGGGCACCCTGAGACGTTCAG...GTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | CTCATCATGATAGCCTGTGGGCTGGTGATGGTGACCCACTGTAGCCGGTCCTTGTGGTTAGGAGGCCCCTaGCCAAGAGGAACAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LIMIACGLVMVTHCSRSLWLGGP*PRGTRR Trigger: TCTCCTTGTTCCTCTTGGCCAGGGGCCTCCTAACCA...CAAGGACCGGCTACAGTGGGTCACCATCACCAGCCCACAGGCTATCATGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CAA 90 bp | GCCAGCCGCAAGAACTCCTTTTTGGAGACCTTCTCTTGCAGAGATTaGAGCTGCCGGTGCTGCTCTTTGGTGACCAGGATCCAGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: ASRKNSFLETFSCRD*SCRCCSLVTRIQPC Trigger: GCATGGCTGGATCCTGGTCACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTTGCGGCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CAA 90 bp | ATGATAGCCTGTGGGCTGGTGATGGTGACCCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAAGCCAGTTCCAGGCGAACCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: MIACGLVMVTHCSRS*LMRYSKASSRRTSP Trigger: GGGTGAGGTTCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACCAGCCCACAGGCTATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR GCA 90 bp | GCACTGGCATCTGTGCTGGGACTGCCAATCCCCCGCAAGCTCACAGCACTCAGTAAACAACCCATGGAGTaGTGGAGTTCCTCAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ALASVLGLPIPRKLTALSKQPME*WSSSKA Trigger: GGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTT...ACTGAGTGCTGTGAGCTTGCGGGGGATTGGCAGTCCCAGCACAGATGCCAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCTGGGACTGCCAATCCCCCGCAAGCTCACAGCACTCAGTTTACTTGAGAAGGAAACCTCCTCTGTaGGCACCTGTTGGGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LCWDCQSPASSQHSVYLRRKPPL*APVGSP Trigger: AGGAGACCCAACAGGTGCCCACAGAGGAGGTTTCCT...TCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTGGCAGTCCCAGCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR-3UTR CCA 90 bp | GCACTGGCATCTGTGCTGGGACTGCCAATCCCCCGCAAGCTCACAGCACTCAGTTCCGATCAAGTCATCTaGAAGATCCAGCTTTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ALASVLGLPIPRKLTALSSDQVI*KIQLCS Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATCGGA...ACTGAGTGCTGTGAGCTTGCGGGGGATTGGCAGTCCCAGCACAGATGCCAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCAGGACGGCACTGGCACTaGCATCTGTGCTGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: SQKQPMECWSSSKARNNPGRHWH*HLCWDC Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGCCGTCC...TGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | CCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGATGCCGTGGACGGCACTaGCACTGGCATCTGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PMECWSSSKARNNPWSVRCRGRH*HWHLCW Trigger: CCAGCACAGATGCCAGTGCCAGTGCCGTCCACGGCA...TCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGGCACAGAGGAGGTaGCCCGCCAGCATCGCATTC | + |
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Preference number: 2 (lower is better) Translates to: RNNPWSAGVPQKPETTHGVAQRR*PASIAF Trigger: GAATGCGATGCTGGCGGGTCACCTCCTCTGTGCCAC...TCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGGCTGGCACTGGCATCTGTaGTGGGACTGCCAATCCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSSKARNNPWSVRVPLRGWHWHL*WDCQSP Trigger: GGGGGATTGGCAGTCCCAGCACAGATGCCAGTGCCA...GCCTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | CCATGGACTCCCGGCTGGCGTCTGGTGACTCGAGCAATGGTGGGGACTTCACTGAGGACATCTTCTGTCTaGTCAGAAGTTAGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: PWTPGWRLVTRAMVGTSLRTSSV*SEVSTV Trigger: AACTGTGCTAACTTCTGACCAGACAGAAGATGTCCT...CAGTGAAGTCCCCACCATTGCTCGAGTCACCAGACGCCAGCCGGGAGTCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR-3UTR CCA 90 bp | GTGTTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAACACTGGCATCTGTGCTaGGACTGCCAATCCCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: VLEFLSEASSHSLLDFVQHWHLC*DCQSPA Trigger: TGCGGGGGATTGGCAGTCCCAGCACAGATGCCAGTG...TTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR CAA 90 bp | CAGAGTTTGGGCCAGCCGCAAGAACTCCTTTTTGGAGACCTTCTCTaGCAGAGATTTGAGCTGCCGGTGCTGCTCTTTGGTGACCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: QSLGQPQELLFGDLL*QRFELPVLLFGDQD Trigger: ATCCTGGTCACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTTGCGGCTGGCCCAAACTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR TCA 90 bp | GACTGCCAATCCCCCGCAAGCTCACAGCACTCAGTTTACTTGAGAGTTTCACCACCTTTGCCCAGGCCCTaGAAAGCCAGAAACAACCCA | + |
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Preference number: 2 (lower is better) Translates to: DCQSPASSQHSVYLRVSPPLPRP*KARNNP Trigger: TGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGG...TGGTGAAACTCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTGGCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCACATCTGTGCTGGGACTaGCAATCCCCCGCAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SQKQPMECWSSSKARNNPHLCWD*QSPASS Trigger: TGAGCTTGCGGGGGATTGGCAGTCCCAGCACAGATG...TGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR TCA 90 bp | CAATCCCCCGCAAGCTCACAGCACTCAGTTTACTTGAGAGTTTCACCATGGACTCAACCCGGTTCTCCATaGCATCGTCGTCATAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSPASSQHSVYLRVSPWTQPGSP*HRRHRQ Trigger: CTGCCTATGACGACGATGTCATGGAGAACCGGGTTG...AGTCCATGGTGAAACTCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAAGGCGCAGCATCTTCCTaGTACTGCCCCCAGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: VLEFLSEASSHSLLDFVQGAASS*YCPQIS Trigger: AGAAATCTGGGGGCAGTATCAGGAAGATGCTGCGCC...TTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGGCTGGTTAGGAGGCCCCTaGCCAAGAGGAACAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSSKARNNPWSVRVPLRGWLGGP*PRGTRR Trigger: TCTCCTTGTTCCTCTTGGCCAGGGGCCTCCTAACCA...GCCTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGGCAAGTGGTTAGGAGGCCCCTaGCCAAGAGGAACAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSKARNNPWSVRVPLRGKWLGGP*PRGTRR Trigger: TCTCCTTGTTCCTCTTGGCCAGGGGCCTCCTAACCA...CTTGCCTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR TCA 90 bp | AGATTTCTTCACCATCAGCTCATCTACCATGGACTGCAGGCAGATGCTCATCATGGTGCTGCTCTTTGGTaGCCAGGATCCAGCCATGCT | + |
|
Preference number: 2 (lower is better) Translates to: RFLHHQLIYHGLQADAHHGAALW*PGSSHA Trigger: AGCATGGCTGGATCCTGGTCACCAAAGAGCAGCACC...ATGATGAGCATCTGCCTGCAGTCCATGGTAGATGAGCTGATGGTGAAGAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR TCA 90 bp | CCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGATCTCTTGCAGAGATTTaGGCTGCCGGTGCTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PMECWSSSKARNNPWSVRSLAEI*AAGAAL Trigger: AAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGA...TCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTGAGTTTAATGATGGGGAGCTGCTCAGACCATTCACAGACCTCTGCCCACAAACAACCCATGGAGTaGTGGAGTTCCTCAAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RLSLMMGSCSDHSQTSAHKQPME*WSSSKA Trigger: GGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTT...GTGGGCAGAGGTCTGTGAATGGTCTGAGCAGCTCCCCATCATTAAACTCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR TCA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATACAATCTTATACTCTTaGCTCCGAAGACTGGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: HRPLPTLCPGPEKPETTHTILYS*LRRLVT Trigger: TGTTACCAGTCTTCGGAGTCAAGAGTATAAGATTGT...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR TCA 90 bp | CCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGCCGGTCCTTGCTCATaGGGTATTCAAAAGCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PMECWSSSKARNNPWSVRAGPCS*GIQKPV Trigger: AACTGGCTTTTGAATACCTCATGAGCAAGGACCGGC...TCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR GCA 90 bp | TTGCAGCCACAGCCTCCAGGACATCTTCTGTCTGGTCAGAAGTTAGCACAGTTACATAAATTCTTCACCTaGCCCACCCTTGGCTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LQPQPPGHLLSGQKLAQLHKFFT*PTLGCH Trigger: ATGGCAGCCAAGGGTGGGGCAGGTGAAGAATTTATG...TAACTGTGCTAACTTCTGACCAGACAGAAGATGTCCTGGAGGCTGTGGCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGAGATTTGAGCTGCCGGTGCTGCTCTTTGGTGACCAGGATCCAGCCATGCCCCAATAACTCTTTCTaGGCACAATCTTATACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CRDLSCRCCSLVTRIQPCPNNSF*AQSYTL Trigger: AAGAGTATAAGATTGTGCTCAGAAAGAGTTATTGGG...GCATGGCTGGATCCTGGTCACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR-3UTR GCA 90 bp | TTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAAAATTGCAGAGATTTGAGCTaGCGGTGCTGCTCTTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LEFLSEASSHSLLDFVQNCRDLS*RCCSLV Trigger: CACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCA...ATTTTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATCATCTACCATGGACTaGAGGCAGATGCTCATCATG | + |
|
Preference number: 2 (lower is better) Translates to: SQKQPMECWSSSKARNNPSSTMD*RQMLIM Trigger: CATGATGAGCATCTGCCTGCAGTCCATGGTAGATGA...TGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAAACTGCTCCCAAGCAATaGGTCTTGCCGAACTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: EKPETTHGVLEFLKSQKQTAPKQ*VLPNSH Trigger: GTGTGAGTTCGGCAAGACCCATTGCTTGGGAGCAGT...TTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTGGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAAACAATCTTATACTCTTaGCTCCGAAGACTGGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: GLVMVTHCSRSLLMRYSKTILYS*LRRLVT Trigger: TGTTACCAGTCTTCGGAGTCAAGAGTATAAGATTGT...TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACCAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGATTAATGATGGGGAGCTaGTCAGACCATTCACAGACC | + |
|
Preference number: 2 (lower is better) Translates to: RNNPWSAGVPQKPETTHGLMMGS*SDHSQT Trigger: GGTCTGTGAATGGTCTGAGCAGCTCCCCATCATTAA...TCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACTTTCTGTCCATTGCTaGGCAGCACTTCCAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: EKPETTHGVLEFLKSQKQLSVHC*AALPRK Trigger: TTTCCTTGGAAGTGCTGCTCAGCAATGGACAGAAAG...TTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR-3UTR GCA 90 bp | TTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAAAATAAACAACCCATGGAGTaGTGGAGTTCCTCAAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LEFLSEASSHSLLDFVQNKQPME*WSSSKA Trigger: GGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTT...ATTTTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR GCA 90 bp | CATGACATCGTCGTCATAGGCAGAGTCCCAATAACTCTTTCTGAGCACAATCTTCCAAGCAATGGGTCTTaGCGAACTCACACACTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: HDIVVIGRVPITLSEHNLPSNGS*RTHTLF Trigger: AAACAGTGTGTGAGTTCGGCAAGACCCATTGCTTGG...AAGATTGTGCTCAGAAAGAGTTATTGGGACTCTGCCTATGACGACGATGTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR CAA 90 bp | GCTCAATGTCTGACACCGTCTCTTTCTGAGCACAATCTTATACTCTaGACTCCGAAGACTGGTAACAGAAACATAAGGCAGTTCAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: AQCLTPSLSEHNLIL*TPKTGNRNIRQFKL Trigger: GAGTTTGAACTGCCTTATGTTTCTGTTACCAGTCTTCGGAGTCAAGAGTATAAGATTGTGCTCAGAAAGAGACGGTGTCAGACATTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202124.4 |
||
| 3UTR CAA 90 bp | ATAGGCAGAGTCCCAATAACTCTTTCTGAGCACAATCTTATACTCTaGACTCCGAAGACTGGTAACAGAAACATAAGGCAGTTCAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: IGRVPITLSEHNLIL*TPKTGNRNIRQFKL Trigger: GAGTTTGAACTGCCTTATGTTTCTGTTACCAGTCTTCGGAGTCAAGAGTATAAGATTGTGCTCAGAAAGAGTTATTGGGACTCTGCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR CCA 72 bp | ACCCCGGCTTGGACTGCTCGTGCCCCCACTAGGGAGTaGCACAGAGGAGGTGACCCGCCAGCATCGCATTCG | + |
|
Preference number: 3 (lower is better) Translates to: TPAWTARAPTRE*HRGGDPPASHS Trigger: CGAATGCGATGCTGGCGGGTCACCTCCTCTGTGCCACTCCCTAGTGGGGGCACGAGCAGTCCAAGCCGGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR TCA 72 bp | CACGGAGTTGCTGGCCTGGTAGTCGCAGCTGGAGACTaGGCTCACTGTTGCCTGCGCTCACCACAACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HGVAGLVVAAGD*AHCCLRSPQQG Trigger: GCCCTGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | CAATGCCCTCGAAGGCGAAATTGCCGTGGACGGCACTaGCACTGGCATCTGTGCTGGGACTGCCAATCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QCPRRRNCRGRH*HWHLCWDCQSP Trigger: GGGGGATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGCCGTCCACGGCAATTTCGCCTTCGAGGGCATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | GAGCCTTCACGGAGTTGCTGGCCTGGTAGTCGCAGCTaGAGACTGAGCTCACTGTTGCCTGCGCTCACCACA | + |
|
Preference number: 3 (lower is better) Translates to: EPSRSCWPGSRS*RLSSLLPALTT Trigger: TGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCGTGAAGGCTC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR TCA 72 bp | GCCAATCCCCCGCAAGCTCACAGCACTCAGTTTACTTaGGAGTTTCACCATGGACTCCCGGCTGGCGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ANPPQAHSTQFT*EFHHGLPAGVW Trigger: CCAGACGCCAGCCGGGAGTCCATGGTGAAACTCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR GCA 72 bp | ACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTaGCGTGGACGGCACTGGCACTGGCATCTGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TDPHLQCPRRRN*RGRHWHWHLCW Trigger: CCAGCACAGATGCCAGTGCCAGTGCCGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATAGACTGAGCTCACTGTaGCCTGCGCTCACCACAACA | + |
|
Preference number: 3 (lower is better) Translates to: HRPLPTLCPGPEKPETTHRLSSL*PALTTT Trigger: TGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCT...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | ATTCGGGTAACACGGAAAGAGCCTTCACGGAGTTGCTaGCCTGGTAGTCGCAGCTGGAGACTGAGCTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: IRVTRKEPSRSC*PGSRSWRLSSL Trigger: CAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCAGCAACTCCGTGAAGGCTCTTTCCGTGTTACCCGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTGACTCGAGCAATGGTGGGGACTTCACTGCTTGCTGGCTGTCTGAACGTCTCTTCTCTTGCAGAGATTaGAGCTGCCGGTGCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GDSSNGGDFTACWLSERLFSCRD*SCRCCS Trigger: AGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAA...GAGACGTTCAGACAGCCAGCAAGCAGTGAAGTCCCCACCATTGCTCGAGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCACCATGGACTCCCGGCTGGCGTCTGGTGACTCGAGCAATGGTGGGGACTCGCAAGAACTCCTTTTaGGAGACCTTCTCTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSPWTPGWRLVTRAMVGTRKNSF*ETFSCR Trigger: TCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTTGCG...AGTCCCCACCATTGCTCGAGTCACCAGACGCCAGCCGGGAGTCCATGGTGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR GCA 72 bp | ATCCAGGCAGCTGAGATTACAGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGCCGTGGACGGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: IQAAEITDPHLQ*PRRRNCRGRHW Trigger: CCAGTGCCGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCAGCTGCCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR GCA 72 bp | GCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTaGTGGAGTTCCTCAAAAGCCAGAAACAACCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: AQALKSQKQPME*WSSSKARNNPW Trigger: CCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR GCA 72 bp | TTGGAGACCTTCTCTTGCAGAGATTTGAGCTGCCGGTaGTGCTCTTTGGTGACCAGGATCCAGCCATGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LETFSCRDLSCR*CSLVTRIQPCS Trigger: TGAGCATGGCTGGATCCTGGTCACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | AGCACTTCCAAGGAAACCTCCTCTGTGGGCACCTGTTaGGTCTCCTGTTGGGCCCGACGTAGAAAGCTATTA | + |
|
Preference number: 3 (lower is better) Translates to: STSKETSSVGTC*VSCWARRRKLL Trigger: TAATAGCTTTCTACGTCGGGCCCAACAGGAGACCCAACAGGTGCCCACAGAGGAGGTTTCCTTGGAAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR CCA 72 bp | TCAGTTTACTTGAGAGTTTCACCATGGACTCCCGGCTaGCGTCTGGTGACTCGAGCAATGGTGGGGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SVYLRVSPWTPG*RLVTRAMVGTS Trigger: TGAAGTCCCCACCATTGCTCGAGTCACCAGACGCCAGCCGGGAGTCCATGGTGAAACTCTCAAGTAAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | AGCTCACAGCACTCAGTTTACTTGAGAGTTTCACCATaGACTCCCGGCTGGCGTCTGGTGACTCGAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: SSQHSVYLRVSP*TPGWRLVTRAM Trigger: CATTGCTCGAGTCACCAGACGCCAGCCGGGAGTCCATGGTGAAACTCTCAAGTAAACTGAGTGCTGTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTTCTTCACCATCAGCTCATCTACCATGGACTGCAGGCAGATGCTCATCATGCCGGTGCTGCTCTTaGGTGACCAGGATCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QISSPSAHLPWTAGRCSSCRCCS*VTRIQP Trigger: TGGCTGGATCCTGGTCACCAAAGAGCAGCACCGGCA...TGATGAGCATCTGCCTGCAGTCCATGGTAGATGAGCTGATGGTGAAGAAATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR TCA 72 bp | ATCTCCTCTCAGGTAGAGGGCAGACATCCAGGCAGCTaGGATTACAGATCCTCATCTCCAATGCCCTCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISSQVEGRHPGS*DYRSSSPMPSK Trigger: CTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCAGCTGCCTGGATGTCTGCCCTCTACCTGAGAGGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | GAAACCTCCTCTGTGGGCACCTGTTGGGTCTCCTGTTaGGCCCGACGTAGAAAGCTATTAAAAGTCTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: ETSSVGTCWVSC*ARRRKLLKVSL Trigger: CAGTGAGACTTTTAATAGCTTTCTACGTCGGGCCCAACAGGAGACCCAACAGGTGCCCACAGAGGAGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGCTGGGACTGCCAATCCCCCGCAAGCTCACAGCACTCAGTTTACTTGAGACGCAAGAACTCCTTTTaGGAGACCTTCTCTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCWDCQSPASSQHSVYLRRKNSF*ETFSCR Trigger: TCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTTGCG...TCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTGGCAGTCCCAGCACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATAGTAGCCACAGTCTCTaGGACTTTGTGCAAAATACT | + |
|
Preference number: 3 (lower is better) Translates to: HRPLPTLCPGPEKPETTHSSHSL*DFVQNT Trigger: AGTATTTTGCACAAAGTCCAAGAGACTGTGGCTACT...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | AATCAGGCTGAGTTTAATGATGGGGAGCTGCTCAGACCATTCACAGACCTCTGCCCCAAGCAATGGGTCTaGCCGAACTCACACACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NQAEFNDGELLRPFTDLCPKQWV*PNSHTV Trigger: AACAGTGTGTGAGTTCGGCAAGACCCATTGCTTGGG...GCAGAGGTCTGTGAATGGTCTGAGCAGCTCCCCATCATTAAACTCAGCCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR TCA 72 bp | GAGCATAAAGCAGGTTCAGGCCAACCCGGTTCTCCATaGCATCGTCGTCATAGGCAGAGTCCCAATAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: EHKAGSGQPGSP*HRRHRQSPNNS Trigger: AGAGTTATTGGGACTCTGCCTATGACGACGATGTCATGGAGAACCGGGTTGGCCTGAACCTGCTTTATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR GCA 72 bp | GCCGAACTCACACACTGTTTGCATAAATTCTTCACCTaGCCCACCCTTGGCTGCCATCTAGTTGAGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: AELTHCLHKFFT*PTLGCHLVESS Trigger: ACTGGACTCAACTAGATGGCAGCCAAGGGTGGGGCAGGTGAAGAATTTATGCAAACAGTGTGTGAGTTCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR GCA 72 bp | CCAGATTTCTTCACCATCAGCTCATCTACCATGGACTaGAGGCAGATGCTCATCATGATAGCCTGTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PDFFTISSSTMD*RQMLIMIACGL Trigger: CAGCCCACAGGCTATCATGATGAGCATCTGCCTGCAGTCCATGGTAGATGAGCTGATGGTGAAGAAATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | CAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTGCTaGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QALKSQKQPMEC*SSSKARNNPWS Trigger: ACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGAGTTTAATGATGGGGAGCTGCTCAGACCATTCACAGACCTCTGCCCACATACTAAATGCTAATTaGGCATCAAGGGCCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLSLMMGSCSDHSQTSAHILNAN*ASRASS Trigger: AGAGCTGGCCCTTGATGCCAAATTAGCATTTAGTAT...GTGGGCAGAGGTCTGTGAATGGTCTGAGCAGCTCCCCATCATTAAACTCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGGAGACCTTCTCTTGCAGAGATTTGAGCTGCCGGTGCTGCTCTTTGGTGAGAACTTTCTGTCCATaGCTGAGCAGCACTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FLETFSCRDLSCRCCSLVRTFCP*LSSTSK Trigger: CTTGGAAGTGCTGCTCAGCAATGGACAGAAAGTTCT...CACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR GCA 72 bp | AAAATATCCGATCAAGTCATCTGGAAGATCCAGCTTTaGAGCCACAGCCTCCAGGACATCTTCTGTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KISDQVIWKIQL*SHSLQDIFCLV Trigger: GACCAGACAGAAGATGTCCTGGAGGCTGTGGCTGCAAAGCTGGATCTTCCAGATGACTTGATCGGATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAACAGCACTCAGTTTACTaGAGAGTTTCACCATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: VLEFLSEASSHSLLDFVQQHSVY*RVSPWT Trigger: AGTCCATGGTGAAACTCTCAAGTAAACTGAGTGCTG...TTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | CCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGATACTAAATGCTAATTaGGCATCAAGGGCCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PWSAGVPQKPETTHGVLEILNAN*ASRASS Trigger: AGAGCTGGCCCTTGATGCCAAATTAGCATTTAGTAT...CTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR TCA 72 bp | ATCCAGCCATGCTCAATGTCTGACACCGTCTCTTTCTaGGCACAATCTTATACTCTTGACTCCGAAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: IQPCSMSDTVSF*AQSYTLDSEDW Trigger: CCAGTCTTCGGAGTCAAGAGTATAAGATTGTGCTCAGAAAGAGACGGTGTCAGACATTGAGCATGGCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202124.4 |
||
| 3UTR TCA 72 bp | CTCTTTGGTGACCAGGATCCAGCCATGCTCAATGTCTaGCACCGTCTCTTTCTGAGCACAATCTTATACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFGDQDPAMLNV*HRLFLSTILYS Trigger: AGAGTATAAGATTGTGCTCAGAAAGAGACGGTGTCAGACATTGAGCATGGCTGGATCCTGGTCACCAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202124.4 |
||
| 3UTR CCA 72 bp | AACAAGGAAGAGACTAAAATATCCGATCAAGTCATCTaGAAGATCCAGCTTTGCAGCCACAGCCTCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: NKEETKISDQVI*KIQLCSHSLQD Trigger: GTCCTGGAGGCTGTGGCTGCAAAGCTGGATCTTCCAGATGACTTGATCGGATATTTTAGTCTCTTCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAATACTAAATGCTAATTaGGCATCAAGGGCCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RNNPWSAGVPQKPETTHGILNAN*ASRASS Trigger: AGAGCTGGCCCTTGATGCCAAATTAGCATTTAGTAT...TCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCAGTAGCCACAGTCTCTaGGACTTTGTGCAAAATACT | + |
|
Preference number: 3 (lower is better) Translates to: SAGVPQKPETTHGVLEFLSSHSL*DFVQNT Trigger: AGTATTTTGCACAAAGTCCAAGAGACTGTGGCTACT...GAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAAACAGTCTCTTGGACTTaGTGCAAAATACTAAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLEFLSEASSHSLLDFVQTVSWT*CKILNA Trigger: AGCATTTAGTATTTTGCACAAAGTCCAAGAGACTGT...TTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR-3UTR CAA 90 bp | CATGACATCGTCGTCATAGGCAGAGTCCCAATAACTCTTTCTGAGCACAATCTTAGTAGCCACAGTCTCTaGGACTTTGTGCAAAATACT | + |
|
Preference number: 3 (lower is better) Translates to: HDIVVIGRVPITLSEHNLSSHSL*DFVQNT Trigger: AGTATTTTGCACAAAGTCCAAGAGACTGTGGCTACT...AAGATTGTGCTCAGAAAGAGTTATTGGGACTCTGCCTATGACGACGATGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| 3UTR-3UTR CAA 90 bp | CATAAGGCAGTTCAAACTCCTGCAGCTTCCGTACAAAAGAAAAGGCTCCATCTTACAGTCTCTTGGACTTaGTGCAAAATACTAAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: HKAVQTPAASVQKKRLHLTVSWT*CKILNA Trigger: AGCATTTAGTATTTTGCACAAAGTCCAAGAGACTGT...AAGATGGAGCCTTTTCTTTTGTACGGAAGCTGCAGGAGTTTGAACTGCCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTGCGCCCCCACTAGGGAGTaGCACAGAGGAGGTGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCPPFAQALKSQKQPMECAPTRE*HRGGDP Trigger: CGGGTCACCTCCTCTGTGCCACTCCCTAGTGGGGGC...GCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTGCCGCCGCTGTCCCCACTaGGGGACTCCGTTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCPPFAQALKSQKQPMECRRCPH*GTPFQE Trigger: TTCCTGAAACGGAGTCCCGCAGTGGGGACAGCGGCG...GCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| CDS-3UTR GCA 90 bp | CCCCGGCTTGGACTGCTCGTGCCCCCACTAGGGAGTGGCACAGAGGAGGTGACCATGTACTTCTCCAACTaGTCTCTCCTCTGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PRLGLLVPPLGSGTEEVTMYFSN*SLLCST Trigger: GGTGGAGCAGAGGAGAGAGCAGTTGGAGAAGTACAT...GGTCACCTCCTCTGTGCCACTCCCTAGTGGGGGCACGAGCAGTCCAAGCCGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| CDS-3UTR CCA 90 bp | GTTTCACCATGGACTCCCGGCTGGCGTCTGGTGACTCGAGCAATGGTGGGGACTTCTGTGGGCACCTGTTaGGTCTCCTGTTGGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPWTPGWRLVTRAMVGTSVGTC*VSCWAR Trigger: TCGGGCCCAACAGGAGACCCAACAGGTGCCCACAGA...AGTCCCCACCATTGCTCGAGTCACCAGACGCCAGCCGGGAGTCCATGGTGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202124.4 |
||
| CDS-3UTR CCA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATTGCCGTGGACGGCACTaGCACTGGCATCTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRPLPTLCPGPEKPETTHCRGRH*HWHLCW Trigger: CCAGCACAGATGCCAGTGCCAGTGCCGTCCACGGCA...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATTTCCGAAGCTGCTCGTaGAGCCCCAGAAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRPLPTLCPGPEKPETTHFRSCS*SPRSWL Trigger: CAGCCAGCTTCTGGGGCTGCACGAGCAGCTTCGGAA...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 |
||
| CDS-3UTR GCA 90 bp | TTCACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCCCTCGAAGGCGAAATTaGCGTGGACGGCACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTDLCPPFAQALKSQKQPPRRRN*RGRHWH Trigger: GTGCCAGTGCCGTCCACGGCAATTTCGCCTTCGAGG...GGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR CCA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATTCTGTGGGCACCTGTTaGGTCTCCTGTTGGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HRPLPTLCPGPEKPETTHSVGTC*VSCWAR Trigger: TCGGGCCCAACAGGAGACCCAACAGGTGCCCACAGA...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000202124.4 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAGGGAAGGTATGGTTAGGAGGCCCCTGGCCAAGAGGAACAAGGAGAAGGTGGCACAGAGGAGGTaGCCCGCCAGCATCGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKREGMVRRPLAKRNKEKVAQRR*PASIAF Trigger: GAATGCGATGCTGGCGGGTCACCTCCTCTGTGCCAC...CTTCTCCTTGTTCCTCTTGGCCAGGGGCCTCCTAACCATACCTTCCCTTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAGATCCAGCTTTGCAGCCACAGCCTCCAGGACATCTTCTGTCTGGTCACGCCGCTGTCCCCACTaGGGGACTCCGTTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRSSFAATASRTSSVWSRRCPH*GTPFQE Trigger: TTCCTGAAACGGAGTCCCGCAGTGGGGACAGCGGCG...TGACCAGACAGAAGATGTCCTGGAGGCTGTGGCTGCAAAGCTGGATCTTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| CDS-3UTR GCA 90 bp | AGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGACTGAACGTCTCAGGGTaGCCCCCACCCGCCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNNPWSAGVPQKPETTHGLNVSG*PPPAGA Trigger: TGCGCCGGCGGGTGGGGGGCACCCTGAGACGTTCAG...TCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| 3UTR CAA 72 bp | TGGCCTGGTAGTCGCAGCTGGAGACTGAGCTCACTGTaGCCTGCGCTCACCACAACAGGGCAATCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WPGSRSWRLSSL*PALTTTGQSFS Trigger: AGAGAAGGATTGCCCTGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGACTACCAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| CDS-3UTR GCA 90 bp | GACTGCCAATCCCCCGCAAGCTCACAGCACTCAGTTTACTTGAGAGTTTCACCACGCCGCTGTCCCCACTaGGGGACTCCGTTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DCQSPASSQHSVYLRVSPRRCPH*GTPFQE Trigger: TTCCTGAAACGGAGTCCCGCAGTGGGGACAGCGGCG...TGGTGAAACTCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTGGCAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| 3UTR CAA 72 bp | TGCCAATCCCCCGCAAGCTCACAGCACTCAGTTTACTaGAGAGTTTCACCATGGACTCCCGGCTGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CQSPASSQHSVY*RVSPWTPGWRL Trigger: CAGACGCCAGCCGGGAGTCCATGGTGAAACTCTCAAGTAAACTGAGTGCTGTGAGCTTGCGGGGGATTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| CDS-3UTR TCA 90 bp | TTCACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCTCTCTTGCAGAGATTTaGGCTGCCGGTGCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTDLCPPFAQALKSQKQPSLAEI*AAGAAL Trigger: AAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGA...GGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR TCA 90 bp | GGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGGTCGCAGCTGGAGACTaGGCTCACTGTTGCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVPQKPETTHGVLEFLSEVAAGD*AHCCLR Trigger: GCGCAGGCAACAGTGAGCTCAGTCTCCAGCTGCGAC...CTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR CCA 90 bp | TTCACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGCAGGAACCACGTTaGCCCCATACTCCTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTDLCPPFAQALKSQKQPMQEPR*PHTPSE Trigger: TTCGGAAGGAGTATGGGGCCAACGTGGTTCCTGCAT...GGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 |
||
| CDS-3UTR CCA 90 bp | TTCACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCGACTTCACTGCTTGCTaGCTGTCTGAACGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTDLCPPFAQALKSQKQPDFTAC*LSERLR Trigger: CCTGAGACGTTCAGACAGCCAGCAAGCAGTGAAGTC...GGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| 3UTR CAA 72 bp | TGTGGGCTGGTGATGGTGACCCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAAGCCAGTTCCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CGLVMVTHCSRS*LMRYSKASSRR Trigger: TCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACCAGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| CDS-3UTR TCA 90 bp | CGTGGGAGCATAGGCACAGGGCAAGTGTGTATAAATCTCCTCTCAGGTAGAGGGCAACCCGGTTCTCCATaGCATCGTCGTCATAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSIGTGQVCINLLSGRGQPGSP*HRRHRQ Trigger: CTGCCTATGACGACGATGTCATGGAGAACCGGGTTG...CCCTCTACCTGAGAGGAGATTTATACACACTTGCCCTGTGCCTATGCTCCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR TCA 90 bp | AACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTATGCTTGCTGGCTGTCTaGACGTCTCAGGGTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPWSAGVPQKPETTHGVLCLLAV*TSQGAP Trigger: GGGGGCACCCTGAGACGTTCAGACAGCCAGCAAGCA...TAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAAAGGAAACCTCCTCTGTaGGCACCTGTTGGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVMVTHCSRSLLMRYSKRKPPL*APVGSP Trigger: AGGAGACCCAACAGGTGCCCACAGAGGAGGTTTCCT...TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACCAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202124.4 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCACACTGGCATCTGTGCTaGGACTGCCAATCCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQKQPMECWSSSKARNNPHWHLC*DCQSPA Trigger: TGCGGGGGATTGGCAGTCCCAGCACAGATGCCAGTG...TGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR CCA 90 bp | CTGAAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACGGACGGCACTGGCACTaGCATCTGTGCTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSQKQPMECWSSSKARNGRHWH*HLCWDC Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGCCGTCC...GTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| 3UTR CAA 72 bp | GGCATCAAAGCGCAGATAGCCATAGTGCCGCAGAGTTaGGGCCAGCCGCAAGAACTCCTTTTTGGAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GIKAQIAIVPQS*GQPQELLFGDL Trigger: AAGGTCTCCAAAAAGGAGTTCTTGCGGCTGGCCCAAACTCTGCGGCACTATGGCTATCTGCGCTTTGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
||
| CDS-3UTR TCA 90 bp | CCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGGGTGCTGCTCTTTGGTaGCCAGGATCCAGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PWSAGVPQKPETTHGVLEGAALW*PGSSHA Trigger: AGCATGGCTGGATCCTGGTCACCAAAGAGCAGCACC...CTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | TTGCCGAACTCACACACTGTTTGCATAAATTCTTCACCTGCCCCACCCTTGGCTAACTGCTCTCTCCTCTaGTCCACCTCTGCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPNSHTVCINSSPAPPLANCSLL*STSAGV Trigger: GACCCCTGCAGAGGTGGAGCAGAGGAGAGAGCAGTT...AGCCAAGGGTGGGGCAGGTGAAGAATTTATGCAAACAGTGTGTGAGTTCGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
||
| CDS-3UTR GCA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATTCTTGCCGAACAGCTTaGATGTACTTCTCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRPLPTLCPGPEKPETTHSCRTA*MYFSNC Trigger: GCAGTTGGAGAAGTACATGCAAGCTGTTCGGCAAGA...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | CCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGCATCTGTGCTGGGACTaGCAATCCCCCGCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWSAGVPQKPETTHGVLEHLCWD*QSPASS Trigger: TGAGCTTGCGGGGGATTGGCAGTCCCAGCACAGATG...CTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | TGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCTGGCACTGGCATCTGTaGTGGGACTGCCAATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSAGVPQKPETTHGVLEFWHWHL*WDCQSP Trigger: GGGGGATTGGCAGTCCCAGCACAGATGCCAGTGCCA...GAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGATGGAAGATCCAGCTTTaGAGCCACAGCCTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PMECWSSSKARNNPWSVRWKIQL*SHSLQD Trigger: GTCCTGGAGGCTGTGGCTGCAAAGCTGGATCTTCCA...TCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAAAATGAGCCTTCACGGAGTTaGTGGCCTGGTAGTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEFLSEASSHSLLDFVQNEPSRS*WPGSRS Trigger: GCTGCGACTACCAGGCCAGCAACTCCGTGAAGGCTC...ATTTTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR GCA 90 bp | CCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGGGGGACTTCACTGCTTaGTGGCTGTCTGAACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWSAGVPQKPETTHGVLEGDFTA*WLSERL Trigger: GAGACGTTCAGACAGCCAGCAAGCAGTGAAGTCCCC...CTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
||
| CDS-3UTR CCA 90 bp | ATCAGGCTGAGTTTAATGATGGGGAGCTGCTCAGACCATTCACAGACCTCTGCCATGCAGGAACCACGTTaGCCCCATACTCCTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRLSLMMGSCSDHSQTSAMQEPR*PHTPSE Trigger: TTCGGAAGGAGTATGGGGCCAACGTGGTTCCTGCAT...GGCAGAGGTCTGTGAATGGTCTGAGCAGCTCCCCATCATTAAACTCAGCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 |
||
| CDS-3UTR CCA 90 bp | AGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGGCAGGAAACCTCCTCTGTaGGCACCTGTTGGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSKARNNPWSVRVPLRGRKPPL*APVGSP Trigger: AGGAGACCCAACAGGTGCCCACAGAGGAGGTTTCCT...GCCTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000202124.4 |
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| CDS-3UTR CCA 90 bp | GGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGTTGAGAGTTTCACCATaGACTCCCGGCTGGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GVPQKPETTHGVLEFLSELRVSP*TPGWRL Trigger: CAGACGCCAGCCGGGAGTCCATGGTGAAACTCTCAA...CTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR TCA 90 bp | CGTGGGAGCATAGGCACAGGGCAAGTGTGTATAAATCTCCTCTCAGGTAGAGGGCTTTCTGTCCATTGCTaGGCAGCACTTCCAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RGSIGTGQVCINLLSGRGLSVHC*AALPRK Trigger: TTTCCTTGGAAGTGCTGCTCAGCAATGGACAGAAAG...CCCTCTACCTGAGAGGAGATTTATACACACTTGCCCTGTGCCTATGCTCCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000202124.4 |
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| CDS-3UTR TCA 90 bp | AACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGGCGCAGCATCTTCCTaGTACTGCCCCCAGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: NPWSAGVPQKPETTHGVLGAASS*YCPQIS Trigger: AGAAATCTGGGGGCAGTATCAGGAAGATGCTGCGCC...TAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR GCA 90 bp | CATAAGGCAGTTCAAACTCCTGCAGCTTCCGTACAAAAGAAAAGGCTCCATCTTTTCCGAAGCTGCTCGTaGAGCCCCAGAAGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HKAVQTPAASVQKKRLHLFRSCS*SPRSWL Trigger: CAGCCAGCTTCTGGGGCTGCACGAGCAGCTTCGGAA...AAGATGGAGCCTTTTCTTTTGTACGGAAGCTGCAGGAGTTTGAACTGCCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| CDS-3UTR GCA 90 bp | AAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACAACTGCTCTCTCCTCTaGTCCACCTCTGCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KSQKQPMECWSSSKARNNNCSLL*STSAGV Trigger: GACCCCTGCAGAGGTGGAGCAGAGGAGAGAGCAGTT...GTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 |
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| CDS-3UTR GCA 90 bp | AAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACGAGCTCACTGTTGCCTaGGCTCACCACAACAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KSQKQPMECWSSSKARNNELTVA*AHHNRA Trigger: TGCCCTGTTGTGGTGAGCGCAGGCAACAGTGAGCTC...GTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CCA 90 bp | ATCAGGCTGAGTTTAATGATGGGGAGCTGCTCAGACCATTCACAGACCTCTGCCTCAGCTCATCTACCATaGACTGCAGGCAGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IRLSLMMGSCSDHSQTSASAHLP*TAGRCS Trigger: TGAGCATCTGCCTGCAGTCCATGGTAGATGAGCTGA...GGCAGAGGTCTGTGAATGGTCTGAGCAGCTCCCCATCATTAAACTCAGCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR GCA 90 bp | AGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGATGCAGAGATTTGAGCTaGCGGTGCTGCTCTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RNNPWSAGVPQKPETTHGCRDLS*RCCSLV Trigger: CACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCA...TCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR GCA 90 bp | TCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGGCAAGGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: SSKARNNPWSVRVPLRGKDPHLQ*PRRRNC Trigger: GCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATC...CTTGCCTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| 3UTR CAA 72 bp | AAGAACTCCTTTTTGGAGACCTTCTCTTGCAGAGATTaGAGCTGCCGGTGCTGCTCTTTGGTGACCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: KNSFLETFSCRD*SCRCCSLVTRI Trigger: GATCCTGGTCACCAAAGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| CDS-3UTR TCA 90 bp | AACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGCCGGTCCTTGCTCATaGGGTATTCAAAAGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: NPWSAGVPQKPETTHGVLAGPCS*GIQKPV Trigger: AACTGGCTTTTGAATACCTCATGAGCAAGGACCGGC...TAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CCA 90 bp | GAAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAAACTGCTCCCAAGCAATaGGTCTTGCCGAACAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: EKPETTHGVLEFLKSQKQTAPKQ*VLPNSL Trigger: CAAGCTGTTCGGCAAGACCCATTGCTTGGGAGCAGT...TTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR TCA 90 bp | AGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCCTTTCTGTCCATTGCTaGGCAGCACTTCCAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SAGVPQKPETTHGVLEFLLSVHC*AALPRK Trigger: TTTCCTTGGAAGTGCTGCTCAGCAATGGACAGAAAG...GAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000202124.4 |
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| CDS-3UTR GCA 90 bp | AAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACATGTACTTCTCCAACTaGTCTCTCCTCTGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: KSQKQPMECWSSSKARNNMYFSN*SLLCST Trigger: GGTGGAGCAGAGGAGAGAGCAGTTGGAGAAGTACAT...GTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 |
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| CDS-3UTR CCA 90 bp | CCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGCAAGAACTCCTTTTTaGAGACCTTCTCTTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PMECWSSSKARNNPWSVRARTPF*RPSLAE Trigger: CTCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTTGC...TCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR GCA 90 bp | TTAGAGTTCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTTGTGCAAAATTCATCTACCATGGACTaGAGGCAGATGCTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: LEFLSEASSHSLLDFVQNSSTMD*RQMLIM Trigger: CATGATGAGCATCTGCCTGCAGTCCATGGTAGATGA...ATTTTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGAACTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CCA 90 bp | AGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCTCCGAGGCAGGACATCTTCTGTCTaGTCAGAAGTTAGCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SSSKARNNPWSVRVPLRGRTSSV*SEVSTV Trigger: AACTGTGCTAACTTCTGACCAGACAGAAGATGTCCT...GCCTCGGAGAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CCA 90 bp | GAAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAATCCGATCAAGTCATCTaGAAGATCCAGCTTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EKPETTHGVLEFLKSQKQSDQVI*KIQLCS Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATCGGA...TTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| 3UTR CAA 72 bp | TCAGAAGTTAGCACAGTTACCAGAACTTTCTGTCCATaGCTGAGCAGCACTTCCAAGGAAACCTCCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SEVSTVTRTFCP*LSSTSKETSSV Trigger: CACAGAGGAGGTTTCCTTGGAAGTGCTGCTCAGCAATGGACAGAAAGTTCTGGTAACTGTGCTAACTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200730.4 |
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| 3UTR CAA 72 bp | TCCTCTCCGAGGCAAGTAGCCACAGTCTCTTGGACTTaGTGCAAAATACTAAATGCTAATTTGGCATCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SSPRQVATVSWT*CKILNANLASR Trigger: CCTTGATGCCAAATTAGCATTTAGTATTTTGCACAAAGTCCAAGAGACTGTGGCTACTTGCCTCGGAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 ENSMUST00000202124.4 |
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| CDS-3UTR TCA 90 bp | AGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGACCCAATAACTCTTTCTaGGCACAATCTTATACTCTT | + |
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Preference number: 4 (lower is better) Translates to: RNNPWSAGVPQKPETTHGPNNSF*AQSYTL Trigger: AAGAGTATAAGATTGTGCTCAGAAAGAGTTATTGGG...TCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | TTCACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCCCCTCGAAGGCGAAATaGCCGTGGACGGCACTGGCA | + |
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Preference number: 5 (lower is better) Translates to: FTDLCPPFAQALKSQKQPPSKAK*PWTALA Trigger: TGCCAGTGCCGTCCACGGCAATTTCGCCTTCGAGGG...GGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTGAA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | CACAGACCTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATATAGTGCCGCAGAGTTaGGGCCAGCCGCAAGAACTC | + |
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Preference number: 5 (lower is better) Translates to: HRPLPTLCPGPEKPETTHIVPQS*GQPQEL Trigger: GAGTTCTTGCGGCTGGCCCAAACTCTGCGGCACTAT...ATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAGGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | GAGACTCCCCTAACGTGGGAGCATAGGCACAGGGCAAGTGTGTATAAATCTCCTTGCCGGTGCTGCTCTTaGGTGACCAGGATCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ETPLTWEHRHRASVYKSPCRCCS*VTRIQP Trigger: TGGCTGGATCCTGGTCACCAAAGAGCAGCACCGGCA...AGGAGATTTATACACACTTGCCCTGTGCCTATGCTCCCACGTTAGGGGAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | CGTGGGAGCATAGGCACAGGGCAAGTGTGTATAAATCTCCTCTCAGGTAGAGGGAATGCAGGAACCACGTaGGCCCCATACTCCTTCCGA | + |
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Preference number: 5 (lower is better) Translates to: RGSIGTGQVCINLLSGRGNAGTT*APYSFR Trigger: TCGGAAGGAGTATGGGGCCAACGTGGTTCCTGCATT...CCCTCTACCTGAGAGGAGATTTATACACACTTGCCCTGTGCCTATGCTCCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 |
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| CDS-3UTR CAA 90 bp | CTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTGCCGCAAGAACTCCTTTTaGGAGACCTTCTCTTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LCPPFAQALKSQKQPMECRKNSF*ETFSCR Trigger: TCTGCAAGAGAAGGTCTCCAAAAAGGAGTTCTTGCG...GCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | CTCTGCCCACCCTTTGCCCAGGCCCTGAAAAGCCAGAAACAACCCATGGAGTGCCAGCACTCAGTTTACTaGAGAGTTTCACCATGGACT | + |
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Preference number: 5 (lower is better) Translates to: LCPPFAQALKSQKQPMECQHSVY*RVSPWT Trigger: AGTCCATGGTGAAACTCTCAAGTAAACTGAGTGCTG...GCACTCCATGGGTTGTTTCTGGCTTTTCAGGGCCTGGGCAAAGGGTGGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | TGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCAATGCAGGAACCACGTaGGCCCCATACTCCTTCCGA | + |
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Preference number: 5 (lower is better) Translates to: WSAGVPQKPETTHGVLEFNAGTT*APYSFR Trigger: TCGGAAGGAGTATGGGGCCAACGTGGTTCCTGCATT...GAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000200730.4 |
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| CDS-3UTR CAA 90 bp | AGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATTCTCTTGCAGAGATTaGAGCTGCCGGTGCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SQKQPMECWSSSKARNNPFSCRD*SCRCCS Trigger: AGAGCAGCACCGGCAGCTCAAATCTCTGCAAGAGAA...TGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | AGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCAGACTGAGCTCACTGTaGCCTGCGCTCACCACAACA | + |
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Preference number: 5 (lower is better) Translates to: SAGVPQKPETTHGVLEFLRLSSL*PALTTT Trigger: TGTTGTGGTGAGCGCAGGCAACAGTGAGCTCAGTCT...GAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | CCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGATTTGGAGACCTTCTCTaGCAGAGATTTGAGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PMECWSSSKARNNPWSVRFGDLL*QRFELP Trigger: CGGCAGCTCAAATCTCTGCAAGAGAAGGTCTCCAAA...TCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | TGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCGTCTTGCCGAACAGCTaGCATGTACTTCTCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WSAGVPQKPETTHGVLEFVLPNS*HVLLQL Trigger: CAGTTGGAGAAGTACATGCAAGCTGTTCGGCAAGAC...GAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | AAAAGCCAGAAACAACCCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCCAAGCAATGGGTCTaGCCGAACAGCTTGCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: KSQKQPMECWSSSKARNNPKQWV*PNSLHV Trigger: TACATGCAAGCTGTTCGGCAAGACCCATTGCTTGGG...GTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGGGTTGTTTCTGGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | TGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCAGAACTTTCTGTCCATaGCTGAGCAGCACTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WSAGVPQKPETTHGVLEFRTFCP*LSSTSK Trigger: CTTGGAAGTGCTGCTCAGCAATGGACAGAAAGTTCT...GAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031029.15 ENSMUST00000202124.4 |
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| CDS-3UTR CAA 90 bp | AGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGTTCCTCCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAGVPQKPETTHGVLEFLHCSRS*LMRYSK Trigger: TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTG...GAGGAACTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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| CDS-3UTR CAA 90 bp | CCATGGAGTGCTGGAGTTCCTCAAAAGCCAGAAACAACCCATGGAGTGTTAGAGCACAATCTTATACTCTaGACTCCGAAGACTGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PWSAGVPQKPETTHGVLEHNLIL*TPKTGN Trigger: GTTACCAGTCTTCGGAGTCAAGAGTATAAGATTGTG...CTCTAACACTCCATGGGTTGTTTCTGGCTTTTGAGGAACTCCAGCACTCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031029.15 |
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