Pregenerated sensors for SNX16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027534Ensembl transcript IDs: ENSMUST00000029047.12, ENSMUST00000099223.11, ENSMUST00000195822.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCACAGACCCTGGGAGACTTCTCAGTAACAGTGAAGGCTCGGTTACCATCCTTCCACCTATGTAAGTGGTaGTTTAAGACAAAGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SQTLGDFSVTVKARLPSFHLCKW*FKTKQA Trigger: TGCTTGCTTTGTCTTAAATCACCACTTACATAGGTG...GAAGGATGGTAACCGAGCCTTCACTGTTACTGAGAAGTCTCCCAGGGTCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099223.11 |
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| 3UTR-3UTR TCA 90 bp | TATGGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTATACATGGTTATTGCTACTCTGCTGAAATaGGAAGTGGAGGAAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: YGTPGVKLLGNFAVYMVIATLLK*EVEEES Trigger: TGACTCTTCCTCCACTTCTCATTTCAGCAGAGTAGC...AATAACCATGTATACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| 3UTR-3UTR TCA 90 bp | ATAGTACAGCATAACATCCTCACATACACAGAAGTACATATGGAACACCAGGAGAAAGAGGTAGTGTTCTaGATGAGGCAAACCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: IVQHNILTYTEVHMEHQEKEVVF*MRQTPV Trigger: CACTGGGGTTTGCCTCATTCAGAACACTACCTCTTT...CTCCTGGTGTTCCATATGTACTTCTGTGTATGTGAGGATGTTATGCTGTACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| 3UTR-3UTR TCA 90 bp | GTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCTACTCTGCTGAAATaGGAAGTGGAGGAAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VNFIHVHSCSLVFQSIRMATLLK*EVEEES Trigger: TGACTCTTCCTCCACTTCTCATTTCAGCAGAGTAGC...CATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGACAAGGCATTTCACAACTGTACAGAGAGCTGAAATAGGACAAACGCTTACAAACACACTAGTCTaGAGCAATATACAGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: EETRHFTTVQRAEIGQTLTNTLV*SNIQAR Trigger: TCTTGCCTGTATATTGCTCCAGACTAGTGTGTTTGT...AAGCGTTTGTCCTATTTCAGCTCTCTGTACAGTTGTGAAATGCCTTGTCTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099223.11 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTTGGATTCTTATTTTTCTTTCCTGGGTGTTCACTGGTTTAACCTATATCGCTACTCTGCTGAAATaGGAAGTGGAGGAAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SSWILIFLSWVFTGLTYIATLLK*EVEEES Trigger: TGACTCTTCCTCCACTTCTCATTTCAGCAGAGTAGC...GATATAGGTTAAACCAGTGAACACCCAGGAAAGAAAAATAAGAATCCAACTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| 3UTR-3UTR TCA 90 bp | GGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTATACATGGTTATTTATAACCTATATCCTGTCTaGGATAGAGACATTATCCAG | + |
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Preference number: 2 (lower is better) Translates to: GTPGVKLLGNFAVYMVIYNLYPV*DRDIIQ Trigger: CTGGATAATGTCTCTATCTCAGACAGGATATAGGTT...ATAAATAACCATGTATACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| 3UTR-3UTR CCA 90 bp | ATGCAATTCATTTTCACCTATGTAAGTGGTGATTTAAGACAAAGCAAGCACACAACAAACACACTAGTCTaGAGCAATATACAGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: MQFIFTYVSGDLRQSKHTTNTLV*SNIQAR Trigger: TCTTGCCTGTATATTGCTCCAGACTAGTGTGTTTGT...TGTGTGCTTGCTTTGTCTTAAATCACCACTTACATAGGTGAAAATGAATTGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTGACTCACAGACCCTGGGAGACTTCTCAGTAACAGTGAAGGCTCGGTTACTCACCCAACTGAACTaGGCACAAATGAGTTTAATT | + |
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Preference number: 3 (lower is better) Translates to: KSDSQTLGDFSVTVKARLLTQLN*AQMSLI Trigger: AATTAAACTCATTTGTGCCAAGTTCAGTTGGGTGAG...TAACCGAGCCTTCACTGTTACTGAGAAGTCTCCCAGGGTCTGTGAGTCACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099223.11 |
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| 3UTR TCA 72 bp | TTCCTGGGTGTTCACTGGTTTAACCTATATCCTGTCTaGGATAGAGACATTATCCAGATTCTAACATGCAAT | + |
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Preference number: 3 (lower is better) Translates to: FLGVHWFNLYPV*DRDIIQILTCN Trigger: ATTGCATGTTAGAATCTGGATAATGTCTCTATCTCAGACAGGATATAGGTTAAACCAGTGAACACCCAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR TCA 90 bp | TGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCTGCCCAAGACATCCCGATTaGCTTGAAGTACAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIPVLLCFSLLGWQLLLCPRHPD*LEVQRA Trigger: AGCCCTCTGTACTTCAAGTCAATCGGGATGTCTTGG...GCAGAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029047.12 |
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| CDS-3UTR GCA 90 bp | TGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCTGCTTCACTGCCTCAGGATaGTGCTCTTCAGCCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CIPVLLCFSLLGWQLLLCFTASG*CSSASL Trigger: AAGAGAGGCTGAAGAGCAGCATCCTGAGGCAGTGAA...GCAGAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | ACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCCCTCTAACTGGCCTTTaGAAGAGGTTGAGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TCIPVLLCFSLLGWQLLLPLTGL*KRLSLW Trigger: CCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGG...GAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | ACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCGCTGAGTCCTCTAACTaGCCTTTGGAAGAGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: TCIPVLLCFSLLGWQLLLAESSN*PLEEVE Trigger: CTCAACCTCTTCCAAAGGCCAGTTAGAGGACTCAGC...GAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | ACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCGTTTCCTATTGGCATTaGAACTGGGACATACGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TCIPVLLCFSLLGWQLLLVSYWH*NWDIRG Trigger: ACCCCGTATGTCCCAGTTCCAATGCCAATAGGAAAC...GAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR TCA 90 bp | TTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGTCTCACAGAAAGCAGTaGATTTGGCCCGCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPVLLCFSLLGWQLSHRKQ*IWPALP Trigger: TGGAAGAGCGGGCCAAATTCACTGCTTTCTGTGAGA...CAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195822.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTAGTGTTCTGAATGAGGCAAACCCCAGTGAATTTATGGGTAGAAAATTGACTGTGCGACTTCTATaGCTGCTATCACACTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: RGSVLNEANPSEFMGRKLTVRLL*LLSHFR Trigger: CCGGAAGTGTGATAGCAGGCATAGAAGTCGCACAGT...CAATTTTCTACCCATAAATTCACTGGGGTTTGCCTCATTCAGAACACTACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | ACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCAGCGGAGTTTCCTATTaGCATTGGAACTGGGACATA | + |
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Preference number: 4 (lower is better) Translates to: TCIPVLLCFSLLGWQLLLSGVSY*HWNWDI Trigger: TATGTCCCAGTTCCAATGCCAATAGGAAACTCCGCT...GAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | TTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCCTCTAACTGGCCTTTaGAAGAGGTTGAGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPVLLCFSLLGWQLPLTGL*KRLSLW Trigger: CCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGG...CAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | GGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTATACATGGTTATTTATGCTGAGTCCTCTAACTaGCCTTTGGAAGAGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GTPGVKLLGNFAVYMVIYAESSN*PLEEVE Trigger: CTCAACCTCTTCCAAAGGCCAGTTAGAGGACTCAGC...ATAAATAACCATGTATACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | ACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCGCTATCAAATGGACCTaGTGGATCATCCAGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: TCIPVLLCFSLLGWQLLLAIKWT*WIIQTK Trigger: CTTTGTCTGGATGATCCACCAGGTCCATTTGATAGC...GAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR TCA 90 bp | ACACAGAAGTACATATGGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTGGATTTTATATACAGTaGATTTGGCCCGCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQKYIWNTRSQATWELCSGFYIQ*IWPALP Trigger: TGGAAGAGCGGGCCAAATTCACTGTATATAAAATCC...ACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCCATATGTACTTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR TCA 90 bp | ACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCGGATTTTATATACAGTaGATTTGGCCCGCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TCIPVLLCFSLLGWQLLLGFYIQ*IWPALP Trigger: TGGAAGAGCGGGCCAAATTCACTGTATATAAAATCC...GAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR GCA 90 bp | TTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTACTGTGCGACTTCTATaGCTGCTATCACACTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FIHVHSCSLVFQSIRMAVTVRLL*LLSHFR Trigger: CCGGAAGTGTGATAGCAGGCATAGAAGTCGCACAGT...AACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | TATGGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTATACATGGTTATTGTTTCCTATTGGCATTaGAACTGGGACATACGGGGT | + |
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Preference number: 4 (lower is better) Translates to: YGTPGVKLLGNFAVYMVIVSYWH*NWDIRG Trigger: ACCCCGTATGTCCCAGTTCCAATGCCAATAGGAAAC...AATAACCATGTATACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | ACACAGAAGTACATATGGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTAAGAGGTTGAGCTTGTaGAAACACTGCCAAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TQKYIWNTRSQATWELCSKRLSL*KHCQKK Trigger: CTTCTTTTGGCAGTGTTTCCACAAGCTCAACCTCTT...ACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCCATATGTACTTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | TACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTAGCTATCAAATGGACCTaGTGGATCATCCAGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: YTCIPVLLCFSLLGWQLLAIKWT*WIIQTK Trigger: CTTTGTCTGGATGATCCACCAGGTCCATTTGATAGC...TAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR TCA 90 bp | TTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGTCTAAAGCATCTATGTaGAGTTGCTTTTCCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPVLLCFSLLGWQLSKASM*SCFSPS Trigger: GCTCGGGGAAAAGCAACTTCACATAGATGCTTTAGA...CAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR GCA 90 bp | GTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGTTCACTGCCTCAGGATaGTGCTCTTCAGCCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VNFIHVHSCSLVFQSIRMFTASG*CSSASL Trigger: AAGAGAGGCTGAAGAGCAGCATCCTGAGGCAGTGAA...CATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR GCA 90 bp | TACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTATCTCACAGAAAGCCCTaGTTTCTTCTAGGCTATCAA | + |
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Preference number: 4 (lower is better) Translates to: YTCIPVLLCFSLLGWQLLSHRKP*FLLGYQ Trigger: TTGATAGCCTAGAAGAAAGCAGGGCTTTCTGTGAGA...TAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR GCA 90 bp | GTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGACTGTGCGACTTCTATaGCTGCTATCACACTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VNFIHVHSCSLVFQSIRMTVRLL*LLSHFR Trigger: CCGGAAGTGTGATAGCAGGCATAGAAGTCGCACAGT...CATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | ATAGTACAGCATAACATCCTCACATACACAGAAGTACATATGGAACACCAGGAGAGCGGAGTTTCCTATTaGCATTGGAACTGGGACATA | + |
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Preference number: 4 (lower is better) Translates to: IVQHNILTYTEVHMEHQESGVSY*HWNWDI Trigger: TATGTCCCAGTTCCAATGCCAATAGGAAACTCCGCT...CTCCTGGTGTTCCATATGTACTTCTGTGTATGTGAGGATGTTATGCTGTACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | TACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCTTCAGCCTCTCTTaGTCTAGCAGAATACTCAAT | + |
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Preference number: 4 (lower is better) Translates to: YTCIPVLLCFSLLGWQLLLFSLS*SSRILN Trigger: ATTGAGTATTCTGCTAGACCAAGAGAGGCTGAAGAG...TAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | ACACAGAAGTACATATGGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTTCTAGAGTTGAAGTGTaGCTTATGATCAGCTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: TQKYIWNTRSQATWELCSSRVEV*LMISSR Trigger: TCTAGAGCTGATCATAAGCCACACTTCAACTCTAGA...ACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCCATATGTACTTCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029047.12 |
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| CDS-3UTR TCA 90 bp | TTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTTCTAAAGCATCTATGTaGAGTTGCTTTTCCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: FIHVHSCSLVFQSIRMAVSKASM*SCFSPS Trigger: GCTCGGGGAAAAGCAACTTCACATAGATGCTTTAGA...AACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR GCA 90 bp | TACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTAAGCTTGTGGAAACACTaGCAAAAGAAGAACTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: YTCIPVLLCFSLLGWQLLSLWKH*QKKNSF Trigger: AAAGGAGTTCTTCTTTTGGCAGTGTTTCCACAAGCT...TAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR GCA 90 bp | TACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTAGATTCCACCTCTTTTTaGTTCTCTAGCAGTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YTCIPVLLCFSLLGWQLLDSTSF*FSSSSL Trigger: AAGAGAACTGCTAGAGAAGCAAAAAGAGGTGGAATC...TAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | ATGCAATTCATTTTCACCTATGTAAGTGGTGATTTAAGACAAAGCAAGCACACACCTCTAACTGGCCTTTaGAAGAGGTTGAGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: MQFIFTYVSGDLRQSKHTPLTGL*KRLSLW Trigger: CCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGG...TGTGTGCTTGCTTTGTCTTAAATCACCACTTACATAGGTGAAAATGAATTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | TCAAGTTGGATTCTTATTTTTCTTTCCTGGGTGTTCACTGGTTTAACCTATATCGCTGAGTCCTCTAACTaGCCTTTGGAAGAGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSWILIFLSWVFTGLTYIAESSN*PLEEVE Trigger: CTCAACCTCTTCCAAAGGCCAGTTAGAGGACTCAGC...GATATAGGTTAAACCAGTGAACACCCAGGAAAGAAAAATAAGAATCCAACTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | GGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTATACATGGTTATTTATCTCTTCAGCCTCTCTTaGTCTAGCAGAATACTCAAT | + |
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Preference number: 4 (lower is better) Translates to: GTPGVKLLGNFAVYMVIYLFSLS*SSRILN Trigger: ATTGAGTATTCTGCTAGACCAAGAGAGGCTGAAGAG...ATAAATAACCATGTATACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CCA 90 bp | AACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAAAGAGGTTGAGCTTGTaGAAACACTGCCAAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NFIHVHSCSLVFQSIRMAKRLSL*KHCQKK Trigger: CTTCTTTTGGCAGTGTTTCCACAAGCTCAACCTCTT...TGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | AACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCACTCTTCAGCCTCTCTTaGTCTAGCAGAATACTCAAT | + |
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Preference number: 4 (lower is better) Translates to: NFIHVHSCSLVFQSIRMALFSLS*SSRILN Trigger: ATTGAGTATTCTGCTAGACCAAGAGAGGCTGAAGAG...TGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTAGTGTTCTGAATGAGGCAAACCCCAGTGAATTTATGGGTAGAAAATTGATCAAATGGACCTGGTaGATCATCCAGACAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSVLNEANPSEFMGRKLIKWTW*IIQTKK Trigger: TTTCTTTGTCTGGATGATCCACCAGGTCCATTTGAT...CAATTTTCTACCCATAAATTCACTGGGGTTTGCCTCATTCAGAACACTACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTACAGCATAACATCCTCACATACACAGAAGTACATATGGAACACCAGGAGATCAAATGGACCTGGTaGATCATCCAGACAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IVQHNILTYTEVHMEHQEIKWTW*IIQTKK Trigger: TTTCTTTGTCTGGATGATCCACCAGGTCCATTTGAT...CTCCTGGTGTTCCATATGTACTTCTGTGTATGTGAGGATGTTATGCTGTACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR CCA 90 bp | TTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGTCTAGAGTTGAAGTGTaGCTTATGATCAGCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPVLLCFSLLGWQLSRVEV*LMISSD Trigger: ATCAGAGCTGATCATAAGCCACACTTCAACTCTAGA...CAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAATTCATTTTCACCTATGTAAGTGGTGATTTAAGACAAAGCAAGCACACATCTAAAGCATCTATGTaGAGTTGCTTTTCCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MQFIFTYVSGDLRQSKHTSKASM*SCFSPS Trigger: GCTCGGGGAAAAGCAACTTCACATAGATGCTTTAGA...TGTGTGCTTGCTTTGTCTTAAATCACCACTTACATAGGTGAAAATGAATTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR GCA 90 bp | AACATGCAGTTGATAGTATCAAGAAGAGACAAGGCATTTCACAACTGTACAGAGGATTCCACCTCTTTTTaGTTCTCTAGCAGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIVSRRDKAFHNCTEDSTSF*FSSSSL Trigger: AAGAGAACTGCTAGAGAAGCAAAAAGAGGTGGAATC...CTCTGTACAGTTGTGAAATGCCTTGTCTCTTCTTGATACTATCAACTGCATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099223.11 |
||
| CDS-3UTR CCA 90 bp | TATGTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGAGCGGAGTTTCCTATTaGCATTGGAACTGGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: YVNFIHVHSCSLVFQSIRSGVSY*HWNWDI Trigger: TATGTCCCAGTTCCAATGCCAATAGGAAACTCCGCT...CCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCATCTAGAGTTGAAGTGTaGCTTATGATCAGCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NFIHVHSCSLVFQSIRMASRVEV*LMISSD Trigger: ATCAGAGCTGATCATAAGCCACACTTCAACTCTAGA...TGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS-3UTR GCA 90 bp | GTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGAAGAAATTCTCTCACTaGAAGGCAGTTAGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNFIHVHSCSLVFQSIRMKKFSH*KAVSNV Trigger: GACATTGCTAACTGCCTTGCAGTGAGAGAATTTCTT...CATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR GCA 90 bp | TATGTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGTCTCACAGAAAGCCCTaGTTTCTTCTAGGCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: YVNFIHVHSCSLVFQSIRSHRKP*FLLGYQ Trigger: TTGATAGCCTAGAAGAAAGCAGGGCTTTCTGTGAGA...CCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR GCA 90 bp | GTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGATTCCACCTCTTTTTaGTTCTCTAGCAGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNFIHVHSCSLVFQSIRMDSTSF*FSSSSL Trigger: AAGAGAACTGCTAGAGAAGCAAAAAGAGGTGGAATC...CATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS-3UTR CCA 90 bp | TATGTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGAAGAGGTTGAGCTTGTaGAAACACTGCCAAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YVNFIHVHSCSLVFQSIRKRLSL*KHCQKK Trigger: CTTCTTTTGGCAGTGTTTCCACAAGCTCAACCTCTT...CCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS-3UTR GCA 90 bp | TATGTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGAGCTTGTGGAAACACTaGCAAAAGAAGAACTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YVNFIHVHSCSLVFQSIRSLWKH*QKKNSF Trigger: AAAGGAGTTCTTCTTTTGGCAGTGTTTCCACAAGCT...CCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAATTCATTTTCACCTATGTAAGTGGTGATTTAAGACAAAGCAAGCACACAAGCTTGTGGAAACACTaGCAAAAGAAGAACTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MQFIFTYVSGDLRQSKHTSLWKH*QKKNSF Trigger: AAAGGAGTTCTTCTTTTGGCAGTGTTTCCACAAGCT...TGTGTGCTTGCTTTGTCTTAAATCACCACTTACATAGGTGAAAATGAATTGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR GCA 90 bp | TCAAGTTGGATTCTTATTTTTCTTTCCTGGGTGTTCACTGGTTTAACCTATATCAAGAAATTCTCTCACTaGAAGGCAGTTAGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSWILIFLSWVFTGLTYIKKFSH*KAVSNV Trigger: GACATTGCTAACTGCCTTGCAGTGAGAGAATTTCTT...GATATAGGTTAAACCAGTGAACACCCAGGAAAGAAAAATAAGAATCCAACTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS TCA 90 bp | GTCCTAATGAGAGGACTACCACACATTGATGATGCACTGTCCATCTaGTCCTGGACATTCGTCTGCTTAAGACTGCCCACAGCTGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLMRGLPHIDDALSI*SWTFVCLRLPTAES Trigger: GGACTCAGCTGTGGGCAGTCTTAAGCAGACGAATGTCCAGGATCAGATGGACAGTGCATCATCAATGTGTGGTAGTCCTCTCATTAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS CCA 90 bp | TGGACATTCGTCTGCTTAAGACTGCCCACAGCTGAGTCCTCTAACTaGCCTTTGGAAGAGGTTGAGCTTGTGGAAACACTGCCAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WTFVCLRLPTAESSN*PLEEVELVETLPKE Trigger: TTCTTTTGGCAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGACTCAGCTGTGGGCAGTCTTAAGCAGACGAATGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | TCACAGACCCTGGGAGACTTCTCAGTAACAGTGAAGGCTCGGTTACCATCCTTCTTATATACAGTGAATTaGGCCCGCTCTTCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: SQTLGDFSVTVKARLPSFLYTVN*ARSSIT Trigger: GGTTATGGAAGAGCGGGCCAAATTCACTGTATATAA...GAAGGATGGTAACCGAGCCTTCACTGTTACTGAGAAGTCTCCCAGGGTCTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099223.11 |
||
| CDS-3UTR CAA 90 bp | TGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCTGCTCCTCTAACTGGCCTTaGGAAGAGGTTGAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CIPVLLCFSLLGWQLLLCSSNWP*EEVELV Trigger: CACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGA...GCAGAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | ACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTACTCTGGAAGAGGTTGAGCTaGTGGAAACACTGCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TCIPVLLCFSLLGWQLLLWKRLS*WKHCQK Trigger: CTTTTGGCAGTGTTTCCACAAGCTCAACCTCTTCCA...GAGTAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS-3UTR CAA 90 bp | TTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGGGCCTTTGGAAGAGGTaGAGCTTGTGGAAACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LYTCIPVLLCFSLLGWQLGLWKR*SLWKHC Trigger: GCAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCC...CAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | TACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTATCCTCTAACTGGCCTTaGGAAGAGGTTGAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTCIPVLLCFSLLGWQLLSSNWP*EEVELV Trigger: CACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGA...TAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | TACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGCTAAAGCGGAGTTTCCTATaGGCATTGGAACTGGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: YTCIPVLLCFSLLGWQLLKRSFL*ALELGH Trigger: ATGTCCCAGTTCCAATGCCAATAGGAAACTCCGCTT...TAGCAACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | TTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTGGCCTTTGGAAGAGGTaGAGCTTGTGGAAACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FIHVHSCSLVFQSIRMAVGLWKR*SLWKHC Trigger: GCAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCC...AACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | ACACAGAAGTACATATGGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTAGCATCTATGTGAAGTaGCTTTTCCCCGAGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TQKYIWNTRSQATWELCSSIYVK*LFPEQF Trigger: AAACTGCTCGGGGAAAAGCAACTTCACATAGATGCT...ACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCCATATGTACTTCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CAA 90 bp | TTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTAGTTTCCTATTGGCATaGGAACTGGGACATACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIHVHSCSLVFQSIRMAVSFLLA*ELGHTG Trigger: CCCCGTATGTCCCAGTTCCAATGCCAATAGGAAACT...AACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | TATGGAACACCAGGAGTCAAGCTACTTGGGAACTTTGCAGTATACATGGTTATTTGGAAGAGGTTGAGCTaGTGGAAACACTGCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YGTPGVKLLGNFAVYMVIWKRLS*WKHCQK Trigger: CTTTTGGCAGTGTTTCCACAAGCTCAACCTCTTCCA...AATAACCATGTATACTGCAAAGTTCCCAAGTAGCTTGACTCCTGGTGTTCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR CAA 90 bp | GTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGGCCTTTGGAAGAGGTaGAGCTTGTGGAAACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VNFIHVHSCSLVFQSIRMGLWKR*SLWKHC Trigger: GCAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCC...CATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGACAAGGCATTTCACAACTGTACAGAGAGCTGAAATAGGACAAACGCTTAGCATCTATGTGAAGTaGCTTTTCCCCGAGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EETRHFTTVQRAEIGQTLSIYVK*LFPEQF Trigger: AAACTGCTCGGGGAAAAGCAACTTCACATAGATGCT...AAGCGTTTGTCCTATTTCAGCTCTCTGTACAGTTGTGAAATGCCTTGTCTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099223.11 |
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| CDS-3UTR CAA 90 bp | AACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCATGGAAGAGGTTGAGCTaGTGGAAACACTGCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NFIHVHSCSLVFQSIRMAWKRLS*WKHCQK Trigger: CTTTTGGCAGTGTTTCCACAAGCTCAACCTCTTCCA...TGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | ATGCAATTCATTTTCACCTATGTAAGTGGTGATTTAAGACAAAGCAAGCACACAAGTTTCCTATTGGCATaGGAACTGGGACATACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MQFIFTYVSGDLRQSKHTSFLLA*ELGHTG Trigger: CCCCGTATGTCCCAGTTCCAATGCCAATAGGAAACT...TGTGTGCTTGCTTTGTCTTAAATCACCACTTACATAGGTGAAAATGAATTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
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| CDS-3UTR CAA 90 bp | TATGTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGAGTTTCCTATTGGCATaGGAACTGGGACATACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YVNFIHVHSCSLVFQSIRSFLLA*ELGHTG Trigger: CCCCGTATGTCCCAGTTCCAATGCCAATAGGAAACT...CCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | ATGCAATTCATTTTCACCTATGTAAGTGGTGATTTAAGACAAAGCAAGCACACATCCTCTAACTGGCCTTaGGAAGAGGTTGAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MQFIFTYVSGDLRQSKHTSSNWP*EEVELV Trigger: CACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGA...TGTGTGCTTGCTTTGTCTTAAATCACCACTTACATAGGTGAAAATGAATTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR CAA 90 bp | AACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAAGCATCTATGTGAAGTaGCTTTTCCCCGAGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NFIHVHSCSLVFQSIRMASIYVK*LFPEQF Trigger: AAACTGCTCGGGGAAAAGCAACTTCACATAGATGCT...TGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS-3UTR CAA 90 bp | TATGTAAACTTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGCAGAAAGCAGTGAATTaGGCCCGCTCTTCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: YVNFIHVHSCSLVFQSIRQKAVN*ARSSIT Trigger: GGTTATGGAAGAGCGGGCCAAATTCACTGCTTTCTG...CCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAAGTTTACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195822.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAATTCATTTTCACCTATGTAAGTGGTGATTTAAGACAAAGCAAGCACACAAAGCGGAGTTTCCTATaGGCATTGGAACTGGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: MQFIFTYVSGDLRQSKHTKRSFL*ALELGH Trigger: ATGTCCCAGTTCCAATGCCAATAGGAAACTCCGCTT...TGTGTGCTTGCTTTGTCTTAAATCACCACTTACATAGGTGAAAATGAATTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS-3UTR CAA 90 bp | TTTATACACGTGCATTCCTGTTCTCTTGTGTTTCAGTCTATTAGGATGGCAGTTTTATATACAGTGAATTaGGCCCGCTCTTCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: FIHVHSCSLVFQSIRMAVLYTVN*ARSSIT Trigger: GGTTATGGAAGAGCGGGCCAAATTCACTGTATATAA...AACTGCCATCCTAATAGACTGAAACACAAGAGAACAGGAATGCACGTGTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 |
||
| CDS GCA 72 bp | GAAGGTCTGTCTTCCCAGTTCACTGCCTCAGGATGCTaGTCTTCAGCCTCTCTTGGTCTAGCAGAATACTCA | + |
|
Preference number: 6 (lower is better) Translates to: EGLSSQFTASGC*SSASLGLAEYS Trigger: TGAGTATTCTGCTAGACCAAGAGAGGCTGAAGAGCAGCATCCTGAGGCAGTGAACTGGGAAGACAGACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS CCA 72 bp | GTCTGCTTAAGACTGCCCACAGCTGAGTCCTCTAACTaGCCTTTGGAAGAGGTTGAGCTTGTGGAAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: VCLRLPTAESSN*PLEEVELVETL Trigger: CAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGACTCAGCTGTGGGCAGTCTTAAGCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS CAA 90 bp | TTCGTCTGCTTAAGACTGCCCACAGCTGAGTCCTCTAACTGGCCTTaGGAAGAGGTTGAGCTTGTGGAAACACTGCCAAAAGAAGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: FVCLRLPTAESSNWP*EEVELVETLPKEEL Trigger: GAGTTCTTCTTTTGGCAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGACTCAGCTGTGGGCAGTCTTAAGCAGACGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS TCA 72 bp | GCTCTAGATTCTTCATCCAAGACATCCCGATTGACTTaGAGTACAGAGGGCTCCACCCTTAGGATCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALDSSSKTSRLT*STEGSTLRICP Trigger: TGGACAGATCCTAAGGGTGGAGCCCTCTGTACTTCAAGTCAATCGGGATGTCTTGGATGAAGAATCTAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029047.12 |
||
| CDS TCA 72 bp | ACACTTCCGGCTTCTCTAGAGTTGAAGTGTGGCTTATaGTCAGCTCTAGATTCTTCATCCAAGACATCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TLPASLELKCGL*SALDSSSKTSR Trigger: TCGGGATGTCTTGGATGAAGAATCTAGAGCTGATCATAAGCCACACTTCAACTCTAGAGAAGCCGGAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029047.12 |
||
| CDS CAA 72 bp | CTGAGTCCTCTAACTGGCCTTTGGAAGAGGTTGAGCTaGTGGAAACACTGCCAAAAGAAGAACTCCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSPLTGLWKRLS*WKHCQKKNSFD Trigger: ATCAAAGGAGTTCTTCTTTTGGCAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS TCA 72 bp | ACACTTCCGGCTTCTCTAGAGTTGAAGTGTGGCTTATaGTCAGCTCTGATTCTGGTCTCTAAAGCATCTATG | + |
|
Preference number: 6 (lower is better) Translates to: TLPASLELKCGL*SALILVSKASM Trigger: CATAGATGCTTTAGAGACCAGAATCAGAGCTGATCATAAGCCACACTTCAACTCTAGAGAAGCCGGAAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099223.11 ENSMUST00000195822.2 |
||
| CDS CCA 72 bp | AGTCCTCTAACTGGCCTTTGGAAGAGGTTGAGCTTGTaGAAACACTGCCAAAAGAAGAACTCCTTTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: SPLTGLWKRLSL*KHCQKKNSFDF Trigger: GAAATCAAAGGAGTTCTTCTTTTGGCAGTGTTTCCACAAGCTCAACCTCTTCCAAAGGCCAGTTAGAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS CCA 72 bp | TGCTATCACACTTCCGGCTTCTCTAGAGTTGAAGTGTaGCTTATGATCAGCTCTAGATTCTTCATCCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: CYHTSGFSRVEV*LMISSRFFIQD Trigger: GTCTTGGATGAAGAATCTAGAGCTGATCATAAGCCACACTTCAACTCTAGAGAAGCCGGAAGTGTGATAGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029047.12 |
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| CDS TCA 72 bp | TTCAGCCTCTCTTGGTCTAGCAGAATACTCAATGGATaGATCTGTCCCTGTAAATTTAGTCCTAATGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSLSWSSRILNG*ICPCKFSPNER Trigger: CCTCTCATTAGGACTAAATTTACAGGGACAGATTCATCCATTGAGTATTCTGCTAGACCAAGAGAGGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029047.12 ENSMUST00000099223.11 ENSMUST00000195822.2 |
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| CDS TCA 72 bp | CATACAGTGATGCTCCAGGTTCTAAGGACAATGTTCTaGTTCTGGTCTCTAAAGCATCTATGTGAAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HTVMLQVLRTMF*FWSLKHLCEVA Trigger: AGCAACTTCACATAGATGCTTTAGAGACCAGAATCAGAACATTGTCCTTAGAACCTGGAGCATCACTGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029047.12 |
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