Pregenerated sensors for SNX15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024787Ensembl transcript IDs: ENSMUST00000025702.14, ENSMUST00000138931.3, ENSMUST00000154601.8, ENSMUST00000235824.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGGGCCAGGTCTGGCTACAGACTCTGGTCTAGATGGGTGAACTaGCAGGTTAGGGGCCCAGATGCCACTCACATAGAACAGATAGGC | + |
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Preference number: 1 (lower is better) Translates to: QWARSGYRLWSRWVN*QVRGPDATHIEQIG Trigger: GCCTATCTGTTCTATGTGAGTGGCATCTGGGCCCCTAACCTGTCAGTTCACCCATCTAGACCAGAGTCTGTAGCCAGACCTGGCCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| 3UTR TCA 90 bp | ATCAGAAGTTCAAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTaGGAAGTCTTTGCTTTTCTTATACTTGATCCAGTTAATACAGAT | + |
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Preference number: 1 (lower is better) Translates to: IRSSSLIPRRQAGQS*EVFAFLILDPVNTD Trigger: ATCTGTATTAACTGGATCAAGTATAAGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTTGAACTTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGTGGCAGTGCTGGAGCTaGCATCCCAGGAAGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: WPLVVIRAGSTARSQREQWQCWS*HPRKGP Trigger: TGGACCCTTCCTGGGATGTCAGCTCCAGCACTGCCA...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTCCAGCCTTTTGGACTCTACCTCAATGGCTGCCAGCTCACCTGTGTGGGGCCTGTACTTTCTTCTaGGCCATCTTGCTGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: PGPAFWTLPQWLPAHLCGACTFF*AILLAH Trigger: ATGGGCCAGCAAGATGGCTCAGAAGAAAGTACAGGC...CCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCTACCTCAATGGCTGCCAGCTCACCTGTGTGGGTAGGGCTGGGGCCTGTATCTTCTGAGCCATCTTaGTGGCCCATGACCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: DSTSMAASSPVWVGLGPVSSEPS*WPMTLN Trigger: GTTCAAGGTCATGGGCCAGCAAGATGGCTCAGAAGA...TACAGGCCCCAGCCCTACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGGTTCCTGGTCCAGCCTTTTGGACTCTACCTCAATGGCTGCCAGCTCACTCTGAGCCATCTTGCTaGCCCATGACCTTGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: PRVPGPAFWTLPQWLPAHSEPSC*PMTLNF Trigger: GAAGTTCAAGGTCATGGGCCAGCAAGATGGCTCAGA...GTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGGAACCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTTCCCAAAGAGAGCAGTaGGGGTGGCTGGCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KSNSKEAGRSELRSLCFSSQREQ*GWLAVL Trigger: CAGCACTGCCAGCCACCCCCACTGCTCTCTTTGGGA...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| 3UTR CAA 90 bp | GGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTTATACTaGATCCAGTTAATACAGATATGGCCCCTGGTAGTCATACGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GGRQVRAEKSLLFLY*IQLIQIWPLVVIRA Trigger: TGCTCGTATGACTACCAGGGGCCATATCTGTATTAACTGGATCAAGTATAAGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| 3UTR CCA 72 bp | TTGGACTCTACCTCAATGGCTGCCAGCTCACCTGTGTaGGTAGGGCTGGGGCCTGTACTTTCTTCTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LDSTSMAASSPV*VGLGPVLSSEP Trigger: TGGCTCAGAAGAAAGTACAGGCCCCAGCCCTACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| 3UTR TCA 72 bp | ACCTGTGTGGGTAGGGCTGGGGCCTGTACTTTCTTCTaGGCCATCTTGCTGGCCCATGACCTTGAACTTCTG | + |
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Preference number: 3 (lower is better) Translates to: TCVGRAGACTFF*AILLAHDLELL Trigger: CAGAAGTTCAAGGTCATGGGCCAGCAAGATGGCTCAGAAGAAAGTACAGGCCCCAGCCCTACCCACACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| 3UTR CCA 72 bp | GGGCTGGGGCCTGTACTTTCTTCTGAGCCATCTTGCTaGCCCATGACCTTGAACTTCTGGTCTTTCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GLGPVLSSEPSC*PMTLNFWSFCF Trigger: GAAGCAGAAAGACCAGAAGTTCAAGGTCATGGGCCAGCAAGATGGCTCAGAAGAAAGTACAGGCCCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| 3UTR TCA 72 bp | AGGTCTGGCTACAGACTCTGGTCTAGATGGGTGAACTaGCAGGTTAGGGGCCCAGATGCCACTCACATAGAA | + |
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Preference number: 3 (lower is better) Translates to: RSGYRLWSRWVN*QVRGPDATHIE Trigger: TTCTATGTGAGTGGCATCTGGGCCCCTAACCTGTCAGTTCACCCATCTAGACCAGAGTCTGTAGCCAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGCCTCCTGGGCAGGGCTaGACGGGAGGGGATCCACTG | + |
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Preference number: 4 (lower is better) Translates to: WPLVVIRAGSTARSQREQPPGQG*TGGDPL Trigger: CAGTGGATCCCCTCCCGTCCAGCCCTGCCCAGGAGG...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGGGCCTCATCCGGAGGTaGTGTGGGGATGAGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WPLVVIRAGSTARSQREQGLIRR*CGDERG Trigger: CCCCCTCTCATCCCCACACCACCTCCGGATGAGGCC...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR GCA 90 bp | TCCTGGTCCAGCCTTTTGGACTCTACCTCAATGGCTGCCAGCTCACCTGTGTGGGGTCCTCCGCGCCCTTaGGCCGCTCCTCGATCACAG | + |
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Preference number: 4 (lower is better) Translates to: SWSSLLDSTSMAASSPVWGPPRP*AAPRSQ Trigger: CTGTGATCGAGGAGCGGCGCAAGGGCGCGGAGGACC...CCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CCA 90 bp | GTAGGGCTGGGGCCTGTACTTTCTTCTGAGCCATCTTGCTGGCCCATGACCTTGCCTCCTGGGCAGGGCTaGACGGGAGGGGATCCACTG | + |
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Preference number: 4 (lower is better) Translates to: VGLGPVLSSEPSCWPMTLPPGQG*TGGDPL Trigger: CAGTGGATCCCCTCCCGTCCAGCCCTGCCCAGGAGG...CAAGGTCATGGGCCAGCAAGATGGCTCAGAAGAAAGTACAGGCCCCAGCCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGCTCCTCCTGTCCTCCTaGCTCCCAGGGTTCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: WPLVVIRAGSTARSQREQLLLSS*LPGFLV Trigger: GACCAGGAACCCTGGGAGCCAGGAGGACAGGAGGAG...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTCCTGGTCCAGCCTTTTGGACTCTACCTCAATGGCTGCCAGCTCACCAGGATGCAGGGTGCGTaGCACCAAGGCCAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: PGFLVQPFGLYLNGCQLTRMQGA*HQGQTQ Trigger: CTGTGTCTGGCCTTGGTGGCACGCACCCTGCATCCT...GGTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGGAACCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGCTCGAGCCAGGGAGCTaGAAGCTTCCTCCGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: WPLVVIRAGSTARSQREQLEPGS*KLPPYC Trigger: ACAGTACGGAGGAAGCTTCCAGCTCCCTGGCTCGAG...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | CTGGGGCCTGTACTTTCTTCTGAGCCATCTTGCTGGCCCATGACCTTGAACTTCGGCCTCATCCGGAGGTaGTGTGGGGATGAGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LGPVLSSEPSCWPMTLNFGLIRR*CGDERG Trigger: CCCCCTCTCATCCCCACACCACCTCCGGATGAGGCC...GAAGTTCAAGGTCATGGGCCAGCAAGATGGCTCAGAAGAAAGTACAGGCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CCA 90 bp | CCTTTTGGACTCTACCTCAATGGCTGCCAGCTCACCTGTGTGGGTAGGGCTGGGCTCGAGCCAGGGAGCTaGAAGCTTCCTCCGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: PFGLYLNGCQLTCVGRAGLEPGS*KLPPYC Trigger: ACAGTACGGAGGAAGCTTCCAGCTCCCTGGCTCGAG...CCCAGCCCTACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR GCA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGTCACCTGAGACACCCTaGAGAAGAATGTGCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: WPLVVIRAGSTARSQREQSPETP*RRMCTP Trigger: TGGGGTGCACATTCTTCTGCAGGGTGTCTCAGGTGA...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR TCA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGCTCTGGGTCCTTCTTTaGGATGAACTGAGCGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: WPLVVIRAGSTARSQREQLWVLL*DELSGY Trigger: GTAACCGCTCAGTTCATCTCAAAGAAGGACCCAGAG...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR GCA 90 bp | GCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGTGCTTCAGGTACTCGGCTaGCTTCTTCTTCACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: APGSHTSRKHGQVPKRAVLQVLG*LLLHTF Trigger: GAAGGTGTGAAGAAGAAGGCAGCCGAGTACCTGAAG...CACTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR TCA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTCAGGGATGGGCACCGTaGAGCGCAGCAGGTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KSNSKEAGRSELRSLCFSQGWAP*SAAGPP Trigger: CGGAGGACCTGCTGCGCTTCACGGTGCCCATCCCTG...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR GCA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTGGTCCTCCGCGCCCTTaGGCCGCTCCTCGATCACAG | + |
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Preference number: 4 (lower is better) Translates to: KSNSKEAGRSELRSLCFSGPPRP*AAPRSQ Trigger: CTGTGATCGAGGAGCGGCGCAAGGGCGCGGAGGACC...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | GCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGTGCTGTACTTTCCTCTTTaGAGTAAGGGTCGAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: APGSHTSRKHGQVPKRAVLYFPL*SKGRKG Trigger: CCCTTTTCGACCCTTACTCCAAAGAGGAAAGTACAG...CACTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | TCACCTGTGTGGGTAGGGCTGGGGCCTGTACTTTCTTCTGAGCCATCTTGCTGGAAAAACTCCTTGAGTTaGGGGCTGTTGTTGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SPVWVGLGPVLSSEPSCWKNSLS*GLLLSA Trigger: TGCACTCAACAACAGCCCCCAACTCAAGGAGTTTTT...CCAGCAAGATGGCTCAGAAGAAAGTACAGGCCCCAGCCCTACCCACACAGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTCGGGAGGGGATCCACTaGCACCTCCAACTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLIREGIH*HLQLLL Trigger: CAGGAGGAGTTGGAGGTGCCAGTGGATCCCCTCCCG...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTGGCTCCCAGGGTTCCTaGTCCAGCCTTTTGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: KSNSKEAGRSELRSLCFSGSQGS*SSLLDS Trigger: AGAGTCCAAAAGGCTGGACCAGGAACCCTGGGAGCC...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTCTGGCCAAGGTAAGCTaGGGCAGGCTCTCCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLILAKVS*GRLSIL Trigger: GAGGATGGAGAGCCTGCCCCAGCTTACCTTGGCCAG...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR TCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTTCATTCCGCAGGGCTTaGGTGATGAGCTCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLISFRRA*VMSSVA Trigger: GGCCACAGAGCTCATCACTCAAGCCCTGCGGAATGA...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTCCTGGTCCAGCCTTTTaGACTCTACCTCAATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSNSKEAGRSELRSLCFSPGPAF*TLPQWL Trigger: CAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGG...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR TCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTAGGGGATGGGTCACCTaGGACACCCTGCAGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLIRGWVT*DTLQKN Trigger: ATTCTTCTGCAGGGTGTCTCAGGTGACCCATCCCCT...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR GCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTCTCTACCTCAATGGCTaGCAGCTCACCTGTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLILYLNG*QLTCVG Trigger: ACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAG...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTTGGACTCTACCTCAATaGCTGCCAGCTCACCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLIWTLPQ*LPAHLC Trigger: ACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCCA...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR TCA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTGGTCCTTCTTTGAGATaGACTGAGCGGTTACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: KSNSKEAGRSELRSLCFSGPSLR*TERLLC Trigger: ACAAAGTAACCGCTCAGTTCATCTCAAAGAAGGACC...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR TCA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTAGACTACTACCTCTTTaGTATCCTCTGGGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KSNSKEAGRSELRSLCFSRLLPL*YPLGPS Trigger: AGAAGGACCCAGAGGATATCAAAGAGGTAGTAGTCT...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTAAAAACTCCTTGAGTTaGGGGCTGTTGTTGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLIKNSLS*GLLLSA Trigger: TGCACTCAACAACAGCCCCCAACTCAAGGAGTTTTT...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| 3UTR CAA 72 bp | CAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTTATACTaGATCCAGTTAATACAGATATGGCCCCTGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: QVRAEKSLLFLY*IQLIQIWPLVV Trigger: GACTACCAGGGGCCATATCTGTATTAACTGGATCAAGTATAAGAAAAGCAAAGACTTCTCAGCTCTGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR TCA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTTTCTTTGAGATGAACTaGGCGGTTACTTTGTACTCT | + |
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Preference number: 4 (lower is better) Translates to: PDATHIEQIGRIRSSSLIFFEMN*AVTLYS Trigger: AGAGTACAAAGTAACCGCTCAGTTCATCTCAAAGAA...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS TCA 90 bp | GCAGCGGCTGAAGTAGCCGGGCCTCATCCGGAGGTGGTGTGGGGATaGGAGGGGGTGGCAGGATTCGCAGGTCCCTGGACACCTCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: AAAEVAGPHPEVVWG*EGVAGFAGPWTPQR Trigger: CCTCTGAGGTGTCCAGGGACCTGCGAATCCTGCCACCCCCTCTCATCCCCACACCACCTCCGGATGAGGCCCGGCTACTTCAGCCGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 ENSMUST00000154601.8 ENSMUST00000235824.2 |
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| CDS-3UTR CAA 90 bp | GGACTCTACCTCAATGGCTGCCAGCTCACCTGTGTGGGTAGGGCTGGGGCCTGTAGGTCCTCCGCGCCCTaGCGCCGCTCCTCGATCACA | + |
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Preference number: 5 (lower is better) Translates to: GLYLNGCQLTCVGRAGACRSSAP*RRSSIT Trigger: TGTGATCGAGGAGCGGCGCAAGGGCGCGGAGGACCT...ACAGGCCCCAGCCCTACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CAA 90 bp | GCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGTGAGGTCCTCCGCGCCCTaGCGCCGCTCCTCGATCACA | + |
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Preference number: 5 (lower is better) Translates to: APGSHTSRKHGQVPKRAVRSSAP*RRSSIT Trigger: TGTGATCGAGGAGCGGCGCAAGGGCGCGGAGGACCT...CACTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS CCA 90 bp | TTGCGCCGCTCCTCGATCACAGAGGCTTCAAACCGCCCAAACACCTaGGCACGGGGGAAGGCCGGAAACTCCTCTAGGCGACGGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LRRSSITEASNRPNT*ARGKAGNSSRRRKR Trigger: CCTCTTCCGTCGCCTAGAGGAGTTTCCGGCCTTCCCCCGTGCCCAGGTGTTTGGGCGGTTTGAAGCCTCTGTGATCGAGGAGCGGCGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 ENSMUST00000154601.8 ENSMUST00000235824.2 |
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| CDS CCA 90 bp | GCTTCCTCCGTACTGTCACAGCTGAAGAGAAGGTCCAAGGCCTCCTaGGCAGGGCTGGACGGGAGGGGATCCACTGGCACCTCCAACTCC | + |
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Preference number: 5 (lower is better) Translates to: ASSVLSQLKRRSKAS*AGLDGRGSTGTSNS Trigger: GGAGTTGGAGGTGCCAGTGGATCCCCTCCCGTCCAGCCCTGCCCAGGAGGCCTTGGACCTTCTCTTCAGCTGTGACAGTACGGAGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 ENSMUST00000154601.8 ENSMUST00000235824.2 |
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| CDS GCA 90 bp | CTCCCAGGGTTCCTGGTCCAGCCTTTTGGACTCTACCTCAATGGCTaGCAGCTCACCTGTGTGGGTAGGGCTGGGGCCTGTACTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LPGFLVQPFGLYLNG*QLTCVGRAGACTFL Trigger: GAGGAAAGTACAGGCCCCAGCCCTACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGGAACCCTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | CCCAGGGTTCCTGGTCCAGCCTTTTGGACTCTACCTCAATGGCTGCCAGCTCACAGTTGGGGGCTGTTGTaGAGTGCAGGGATGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: PRVPGPAFWTLPQWLPAHSWGLL*SAGMGT Trigger: GGTGCCCATCCCTGCACTCAACAACAGCCCCCAACT...GTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGGAACCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS TCA 90 bp | TGCCTTCTTCTTCACACCTTCCCGGCGGGCAGGGGATGGGTCACCTaGGACACCCTGCAGAAGAATGTGCACCCCATCTTGGTAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: CLLLHTFPAGRGWVT*DTLQKNVHPILVAL Trigger: CAAGGCTACCAAGATGGGGTGCACATTCTTCTGCAGGGTGTCTCAGGTGACCCATCCCCTGCCCGCCGGGAAGGTGTGAAGAAGAAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | GCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGTGTTCATTCCGCAGGGCTaGAGTGATGAGCTCTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: APGSHTSRKHGQVPKRAVFIPQG*SDELCG Trigger: GCCACAGAGCTCATCACTCAAGCCCTGCGGAATGAA...CACTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGAATGTGCACCCCATCTaGGTAGCCTTGGAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: WPLVVIRAGSTARSQREQNVHPI*VALESS Trigger: GCTGCTCTCCAAGGCTACCAAGATGGGGTGCACATT...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS CCA 90 bp | GATGCAGGGTGCGTGCCACCAAGGCCAGACACAGCAAGTCCTCTTTaGAGTAAGGGTCGAAAAGGGCAAGTTCAGCCTCAGAGAGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: DAGCVPPRPDTASPL*SKGRKGQVQPQRGD Trigger: GTCCCCTCTCTGAGGCTGAACTTGCCCTTTTCGACCCTTACTCCAAAGAGGACTTGCTGTGTCTGGCCTTGGTGGCACGCACCCTGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CAA 90 bp | CAGGGTTCCTGGTCCAGCCTTTTGGACTCTACCTCAATGGCTGCCAGCTCACCTTTGAGTTGGGGGCTGTaGTTGAGTGCAGGGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: QGSWSSLLDSTSMAASSPLSWGL*LSAGMG Trigger: GCCCATCCCTGCACTCAACAACAGCCCCCAACTCAA...AGGTGAGCTGGCAGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGGAACCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CAA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGGAAAAACTCCTTGAGTaGGGGGCTGTTGTTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: WPLVVIRAGSTARSQREQEKLLE*GAVVEC Trigger: GCACTCAACAACAGCCCCCAACTCAAGGAGTTTTTC...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | GACTCTACCTCAATGGCTGCCAGCTCACCTGTGTGGGTAGGGCTGGGGCCTGTAGAAAAACTCCTTGAGTaGGGGGCTGTTGTTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: DSTSMAASSPVWVGLGPVEKLLE*GAVVEC Trigger: GCACTCAACAACAGCCCCCAACTCAAGGAGTTTTTC...TACAGGCCCCAGCCCTACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS-3UTR CAA 90 bp | TGGCCCCTGGTAGTCATACGAGCAGGAAGCACGGCCAGGTCCCAAAGAGAGCAGCAGACTACTACCTCTTaGATATCCTCTGGGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: WPLVVIRAGSTARSQREQQTTTS*ISSGSF Trigger: GAAGGACCCAGAGGATATCAAAGAGGTAGTAGTCTG...CTGCTCTCTTTGGGACCTGGCCGTGCTTCCTGCTCGTATGACTACCAGGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTCCCATCTTGGTAGCCTaGGAGAGCAGCAGCGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: KSNSKEAGRSELRSLCFSPILVA*ESSSVG Trigger: GCCTACGCTGCTGCTCTCCAAGGCTACCAAGATGGG...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTTTGAGTTGGGGGCTGTaGTTGAGTGCAGGGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: KSNSKEAGRSELRSLCFSLSWGL*LSAGMG Trigger: GCCCATCCCTGCACTCAACAACAGCCCCCAACTCAA...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | CCAGATGCCACTCACATAGAACAGATAGGCAGGATCAGAAGTTCAAGTCTAATTAGTTGGGGGCTGTTGTaGAGTGCAGGGATGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: PDATHIEQIGRIRSSSLISWGLL*SAGMGT Trigger: GGTGCCCATCCCTGCACTCAACAACAGCCCCCAACT...AATTAGACTTGAACTTCTGATCCTGCCTATCTGTTCTATGTGAGTGGCATCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS-3UTR CAA 90 bp | AAGTCTAATTCCAAGGAGGCAGGCAGGTCAGAGCTGAGAAGTCTTTGCTTTTCTTCCTGGTCCAGCCTTTaGGACTCTACCTCAATGGCT | + |
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Preference number: 5 (lower is better) Translates to: KSNSKEAGRSELRSLCFSSWSSL*DSTSMA Trigger: AGCCATTGAGGTAGAGTCCAAAAGGCTGGACCAGGA...AGAAAAGCAAAGACTTCTCAGCTCTGACCTGCCTGCCTCCTTGGAATTAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS TCA 72 bp | AACTCCTCCTGGCCCCTCCTTTCCGCAGGCAGCGGCTaGAGTAGCCGGGCCTCATCCGGAGGTGGTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: NSSWPLLSAGSG*SSRASSGGGVG Trigger: CCCCACACCACCTCCGGATGAGGCCCGGCTACTTCAGCCGCTGCCTGCGGAAAGGAGGGGCCAGGAGGAGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 ENSMUST00000154601.8 ENSMUST00000235824.2 |
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| CDS CAA 72 bp | ATGGGCACCGTGAAGCGCAGCAGGTCCTCCGCGCCCTaGCGCCGCTCCTCGATCACAGAGGCTTCAAACCGC | + |
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Preference number: 6 (lower is better) Translates to: MGTVKRSRSSAP*RRSSITEASNR Trigger: GCGGTTTGAAGCCTCTGTGATCGAGGAGCGGCGCAAGGGCGCGGAGGACCTGCTGCGCTTCACGGTGCCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 ENSMUST00000154601.8 ENSMUST00000235824.2 |
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| CDS CAA 90 bp | AGTGCAGGGATGGGCACCGTGAAGCGCAGCAGGTCCTCCGCGCCCTaGCGCCGCTCCTCGATCACAGAGGCTTCAAACCGCCCAAACACC | + |
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Preference number: 6 (lower is better) Translates to: SAGMGTVKRSRSSAP*RRSSITEASNRPNT Trigger: GGTGTTTGGGCGGTTTGAAGCCTCTGTGATCGAGGAGCGGCGCAAGGGCGCGGAGGACCTGCTGCGCTTCACGGTGCCCATCCCTGCACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 ENSMUST00000154601.8 ENSMUST00000235824.2 |
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| CDS CAA 90 bp | TTGGAGAGCAGCAGCGTAGGCGCCAGCCTTTTCATTCCGCAGGGCTaGAGTGATGAGCTCTGTGGCCTGGCCAAGGTAAGCTGGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LESSSVGASLFIPQG*SDELCGLAKVSWGR Trigger: CCTGCCCCAGCTTACCTTGGCCAGGCCACAGAGCTCATCACTCAAGCCCTGCGGAATGAAAAGGCTGGCGCCTACGCTGCTGCTCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS TCA 72 bp | CTTCACACCTTCCCGGCGGGCAGGGGATGGGTCACCTaGGACACCCTGCAGAAGAATGTGCACCCCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LHTFPAGRGWVT*DTLQKNVHPIL Trigger: CAAGATGGGGTGCACATTCTTCTGCAGGGTGTCTCAGGTGACCCATCCCCTGCCCGCCGGGAAGGTGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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| CDS CCA 72 bp | TCCTCGATCACAGAGGCTTCAAACCGCCCAAACACCTaGGCACGGGGGAAGGCCGGAAACTCCTCTAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: SSITEASNRPNT*ARGKAGNSSRR Trigger: TCGCCTAGAGGAGTTTCCGGCCTTCCCCCGTGCCCAGGTGTTTGGGCGGTTTGAAGCCTCTGTGATCGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 ENSMUST00000154601.8 ENSMUST00000235824.2 |
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| CDS CCA 72 bp | CACCTTCCCGGCGGGCAGGGGATGGGTCACCCTCTTTaGAGTAAGGGTCGAAAAGGGCAAGTTCAGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HLPGGQGMGHPL*SKGRKGQVQPQ Trigger: CTGAGGCTGAACTTGCCCTTTTCGACCCTTACTCCAAAGAGGGTGACCCATCCCCTGCCCGCCGGGAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154601.8 |
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| CDS CCA 72 bp | TTGGACTCTACCTCAATGGCTGCCAGCTCACCTGTGTaGGTAGGGCTGGGGCCTGTACTTTCCTCTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LDSTSMAASSPV*VGLGPVLSSLE Trigger: CTCCAAAGAGGAAAGTACAGGCCCCAGCCCTACCCACACAGGTGAGCTGGCAGCCATTGAGGTAGAGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025702.14 ENSMUST00000138931.3 |
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| CDS CCA 72 bp | TGCGTGCCACCAAGGCCAGACACAGCAAGTCCTCTTTaGAGTAAGGGTCGAAAAGGGCAAGTTCAGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: CVPPRPDTASPL*SKGRKGQVQPQ Trigger: CTGAGGCTGAACTTGCCCTTTTCGACCCTTACTCCAAAGAGGACTTGCTGTGTCTGGCCTTGGTGGCACGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235824.2 |
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| CDS CAA 72 bp | ACCCTGCAGAAGAATGTGCACCCCATCTTGGTAGCCTaGGAGAGCAGCAGCGTAGGCGCCAGCCTTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: TLQKNVHPILVA*ESSSVGASLFI Trigger: AATGAAAAGGCTGGCGCCTACGCTGCTGCTCTCCAAGGCTACCAAGATGGGGTGCACATTCTTCTGCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025702.14 |
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