Pregenerated sensors for SNX13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020590Ensembl transcript IDs: ENSMUST00000048519.17, ENSMUST00000163677.3, ENSMUST00000221272.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTTTGGTTTGGTTGGTCTGCTGTTTGCCATCTCTCTGGCGACCTaGGAGAACCTCGAGCTGTTGCTGGGCTGTAACCCGGTACCCTTC | + |
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Preference number: 1 (lower is better) Translates to: TFGLVGLLFAISLAT*ENLELLLGCNPVPF Trigger: GAAGGGTACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR GCA 90 bp | TGCTGTTTGCCATCTCTCTGGCGACCTGAGAGAACCTCGAGCTGTTaGTGGGCTGTAACCCGGTACCCTTCCACTGTCATCCAGAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: CCLPSLWRPERTSSC*WAVTRYPSTVIQKK Trigger: CTTCTTCTGGATGACAGTGGAAGGGTACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR CCA 90 bp | TGTTTGCCATCTCTCTGGCGACCTGAGAGAACCTCGAGCTGTTGCTaGGCTGTAACCCGGTACCCTTCCACTGTCATCCAGAAGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: CLPSLWRPERTSSCC*AVTRYPSTVIQKKR Trigger: TCTCTTCTTCTGGATGACAGTGGAAGGGTACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR GCA 90 bp | CAGCTGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTCTGCTGTTTaGCATCTCTCTGGCGACCTGAGAGAACCTCGAGCTGTTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QLLLLKDLWFGWSAV*HLSGDLREPRAVAG Trigger: CCCAGCAACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR CCA 90 bp | CTTAAAAGACCTTTGGTTTGGTTGGTCTGCTGTTTGCCATCTCTCTaGCGACCTGAGAGAACCTCGAGCTGTTGCTGGGCTGTAACCCGG | + |
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Preference number: 1 (lower is better) Translates to: LKRPLVWLVCCLPSL*RPERTSSCCWAVTR Trigger: CCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR GCA 90 bp | ATTCCAACAGCTGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTCTaGTGTTTGCCATCTCTCTGGCGACCTGAGAGAACCTCGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: IPTAAALKRPLVWLV*CLPSLWRPERTSSC Trigger: ACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTGTTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR CCA 90 bp | GACAGCAAGACAAATCCCATTCCAGGCTCCAAGCTCCCAAAGAGCTaGGTTATCAATACTCTGTCCCTTTACAACAAGCACCCAAACGTT | + |
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Preference number: 1 (lower is better) Translates to: DSKTNPIPGSKLPKS*VINTLSLYNKHPNV Trigger: AACGTTTGGGTGCTTGTTGTAAAGGGACAGAGTATTGATAACCCAGCTCTTTGGGAGCTTGGAGCCTGGAATGGGATTTGTCTTGCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CCA 90 bp | CATAAATTCCAACAGCTGCTGCTCTTAAAAGACCTTTGGTTTGGTTaGTCTGCTGTTTGCCATCTCTCTGGCGACCTGAGAGAACCTCGA | + |
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Preference number: 1 (lower is better) Translates to: HKFQQLLLLKDLWFG*SAVCHLSGDLREPR Trigger: TCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTGTTGGAATTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR TCA 90 bp | GTTCTGAAGATCACTCACCTGCTAACCCACATGATAGCAAAATGCTaGTGCCCCACAAGATCCTTGAGGGAGACAAATCTCTCCAACTCT | + |
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Preference number: 1 (lower is better) Translates to: VLKITHLLTHMIAKC*CPTRSLRETNLSNS Trigger: AGAGTTGGAGAGATTTGTCTCCCTCAAGGATCTTGTGGGGCATCAGCATTTTGCTATCATGTGGGTTAGCAGGTGAGTGATCTTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR GCA 90 bp | TTAAAATGCTTTACACAGGACGGTAATTTGGGAAGGGTGATTTCCTaGACTAAGGGCATTCTTTCCCTCACTTTGCCCAGGCTACCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LKCFTQDGNLGRVIS*TKGILSLTLPRLPG Trigger: TCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTTAGTGCAGGAAATCACCCTTCCCAAATTACCGTCCTGTGTAAAGCATTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CCA 90 bp | AAGGGCATTCTTTCCCTCACTTTGCCCAGGCTACCTGGAAACAACTaGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATGATA | + |
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Preference number: 1 (lower is better) Translates to: KGILSLTLPRLPGNN*TIVLKITHLLTHMI Trigger: TATCATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR TCA 90 bp | AGGTTTTCCACATCTCCTCAGTGTTTAGGTTGCGCCGGTGTACAGTaGTGGCATATAGTGCATATGTCTTGCCATGATCATTACAAACGC | + |
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Preference number: 1 (lower is better) Translates to: RFSTSPQCLGCAGVQ*WHIVHMSCHDHYKR Trigger: GCGTTTGTAATGATCATGGCAAGACATATGCACTATATGCCATCACTGTACACCGGCGCAACCTAAACACTGAGGAGATGTGGAAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR GCA 90 bp | AACAAAGTGCATCCACTGGTCAATGGCACAACTGTTTCCAGCAACTaGATGGGACACTTGAGCTATAGGAAATGCTCATCTAAGTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: NKVHPLVNGTTVSSN*MGHLSYRKCSSKCD Trigger: GTCACACTTAGATGAGCATTTCCTATAGCTCAAGTGTCCCATGCAGTTGCTGGAAACAGTTGTGCCATTGACCAGTGGATGCACTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CCA 90 bp | AATACTGCTCATAAATTCCAACAGCTGCTGCTCTTAAAAGACCTTTaGTTTGGTTGGTCTGCTGTTTGCCATCTCTCTGGCGACCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: NTAHKFQQLLLLKDL*FGWSAVCHLSGDLR Trigger: TCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTGTTGGAATTTATGAGCAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR CCA 90 bp | CAGTCTTACGATGTACTAGGATTCTGTTTTCAGACATGGAAAGACTaGTATAGACACAACAGTACGGGAGTTACACCCCAGGAGATCTGT | + |
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Preference number: 1 (lower is better) Translates to: QSYDVLGFCFQTWKD*YRHNSTGVTPQEIC Trigger: ACAGATCTCCTGGGGTGTAACTCCCGTACTGTTGTGTCTATACCAGTCTTTCCATGTCTGAAAACAGAATCCTAGTACATCGTAAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR TCA 90 bp | AACCATGTAAGACACAGGACTCTCTTGGTATTGGTGGATTACAGTTaGAAAGGAGAACCAGTCTTACGATGTACTAGGATTCTGTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: NHVRHRTLLVLVDYS*KGEPVLRCTRILFS Trigger: TGAAAACAGAATCCTAGTACATCGTAAGACTGGTTCTCCTTTTCAACTGTAATCCACCAATACCAAGAGAGTCCTGTGTCTTACATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR TCA 90 bp | AAGACCACAGCAAACAGGGAAAGATGGACCTTTAGGAAATGGAGATaGGCTCTTACTCAATCTCTACATATAATTAATCAGATGAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: KTTANRERWTFRKWR*ALTQSLHIINQMKC Trigger: GCACTTCATCTGATTAATTATATGTAGAGATTGAGTAAGAGCTCATCTCCATTTCCTAAAGGTCCATCTTTCCCTGTTTGCTGTGGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
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| 3UTR GCA 90 bp | CAAGAAATTTTGTTGTTGTTGTTGTTTAAATTAAGGCTAACAAAGTaGATCCACTGGTCAATGGCACAACTGTTTCCAGCAACTGCATGG | + |
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Preference number: 1 (lower is better) Translates to: QEILLLLLFKLRLTK*IHWSMAQLFPATAW Trigger: CCATGCAGTTGCTGGAAACAGTTGTGCCATTGACCAGTGGATGCACTTTGTTAGCCTTAATTTAAACAACAACAACAACAAAATTTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR TCA 90 bp | CACTGGAAGTATTTAAAAGTACAGAAATCCTGCATGTATGGGATATaGAGACTTCCTAATGGACAAAATGGAGAGAACACTAGGAAATGC | + |
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Preference number: 1 (lower is better) Translates to: HWKYLKVQKSCMYGI*RLPNGQNGENTRKC Trigger: GCATTTCCTAGTGTTCTCTCCATTTTGTCCATTAGGAAGTCTTCATATCCCATACATGCAGGATTTCTGTACTTTTAAATACTTCCAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR TCA 90 bp | ATTTCTTCTGCCAGACAAACAGAATCTTTCCTCACTTGCAAGTTTTaGAAGGGGCTTTACTTATGTAATTCTGAAAGACATGCAACGCAT | + |
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Preference number: 1 (lower is better) Translates to: ISSARQTESFLTCKF*KGLYLCNSERHATH Trigger: ATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAGCCCCTTTCAAAACTTGCAAGTGAGGAAAGATTCTGTTTGTCTGGCAGAAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR GCA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCTCTCCAACTCTGAGCTaGGCTCTGCAGCCACCACAC | + |
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Preference number: 2 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFSPTLS*ALQPPH Trigger: GTGTGGTGGCTGCAGAGCGCAGCTCAGAGTTGGAGA...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR TCA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCGCCCCACAAGATCCTTaGGGGAGACAAATCTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFAPQDP*GRQISP Trigger: TGGAGAGATTTGTCTCCCTCAAGGATCTTGTGGGGC...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CCA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCATGCCAAAGGAGAGGTaGAGAGGTGAGGGCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: HMHTALVSIGEPYRKASLMPKER*RGEGPK Trigger: CTTAGGGCCCTCACCTCTCCACCTCTCCTTTGGCAT...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CAA 90 bp | ACAGCTGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTCTGCTGTTaGCCATCTCTCTGGCGACCTGAGAGAACCTCGAGCTGTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TAAALKRPLVWLVCC*PSLWRPERTSSCCW Trigger: CCAGCAACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCTGGGTAAGAAGGATCTaGAAGACAGCAAGACAAATC | + |
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Preference number: 2 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFWVRRI*KTARQI Trigger: GATTTGTCTTGCTGTCTTTCAGATCCTTCTTACCCA...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR GCA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCAAGAGAGCTACCACATaGTTCTTCTGCACAGAATGC | + |
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Preference number: 2 (lower is better) Translates to: HMHTALVSIGEPYRKASLKRATT*FFCTEC Trigger: GCATTCTGTGCAGAAGAAGCATGTGGTAGCTCTCTT...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CAA 90 bp | GAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTaGAACGAGACGGGGCAGGATCCTCTCGATGTTGCAAATAACGCA | + |
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Preference number: 2 (lower is better) Translates to: ERMLISLEQKRPTPF*NETGQDPLDVANNA Trigger: TGCGTTATTTGCAACATCGAGAGGATCCTGCCCCGTCTCGTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CAA 90 bp | TTGGGAAGGGTGATTTCCTGCACTAAGGGCATTCTTTCCCTCACTTaGCCCAGGCTACCTGGAAACAACTGGACAATTGTTCTGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: LGRVISCTKGILSLT*PRLPGNNWTIVLKI Trigger: GATCTTCAGAACAATTGTCCAGTTGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTTAGTGCAGGAAATCACCCTTCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CAA 90 bp | CCACACTCTGTTGTAAGACACAGACGTGCACAGACACGTGGCCATTaGACATTTCTGCTCCTGAAATATAAAAGCTTCTCAGCCGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: PHSVVRHRRAQTRGH*TFLLLKYKSFSAEV Trigger: AACCTCGGCTGAGAAGCTTTTATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCTTACAACAGAGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CCA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCCAAAGGCTTCACAACTaGAAAAGGTATTTGTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: HMHTALVSIGEPYRKASLQRLHN*KRYLFH Trigger: GTGAAACAAATACCTTTTCCAGTTGTGAAGCCTTTG...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR TCA 90 bp | AATGGCACAACTGTTTCCAGCAACTGCATGGGACACTTGAGCTATAGGAAATGCACAGGAGGCTGTGTATaGAATTATTGCACTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: NGTTVSSNCMGHLSYRKCTGGCV*NYCTCG Trigger: GCCACAAGTGCAATAATTTCATACACAGCCTCCTGT...GCATTTCCTATAGCTCAAGTGTCCCATGCAGTTGCTGGAAACAGTTGTGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR TCA 90 bp | TGCAACATTGTCTACAAGAATGCTGTCCAAGGGGACTGTACAAAGTTTCCCAAACTGCTGCCTTATCTCTaGCTGCCTCTAACTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: CNIVYKNAVQGDCTKFPKLLPYL*LPLTLQ Trigger: TTGGAGAGTTAGAGGCAGTCAGAGATAAGGCAGCAG...TTTGGGAAACTTTGTACAGTCCCCTTGGACAGCATTCTTGTAGACAATGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCACACTCTGGCACTCTaGCACTGGGAGAGAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LYLCNSERHATHAECVHTHTLAL*HWERML Trigger: CAGCATTCTCTCCCAGTGCCAGAGTGCCAGAGTGTG...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CCA 90 bp | AATGGCACAACTGTTTCCAGCAACTGCATGGGACACTTGAGCTATAGGAAATGCAAGCTCCCAAAGAGCTaGGTTATCAATACTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: NGTTVSSNCMGHLSYRKCKLPKS*VINTLS Trigger: GGACAGAGTATTGATAACCCAGCTCTTTGGGAGCTT...GCATTTCCTATAGCTCAAGTGTCCCATGCAGTTGCTGGAAACAGTTGTGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CAA 90 bp | CTCAAGGAAAACTGGATAACTTGCTGGAGAGGCTCATCAATTATATaGGCACCCGTCAATCTTCTGTCAATCTTTATAGTCCTGGCTTCG | + |
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Preference number: 2 (lower is better) Translates to: LKENWITCWRGSSII*APVNLLSIFIVLAS Trigger: CGAAGCCAGGACTATAAAGATTGACAGAAGATTGACGGGTGCCAATATAATTGATGAGCCTCTCCAGCAAGTTATCCAGTTTTCCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR-3UTR GCA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATTTACCTGTGACCCATTaGTTTGTGCTTCCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LCNSERHATHAECVHTPHLPVTH*FVLPSA Trigger: AGCTGAGGGAAGCACAAAGCAATGGGTCACAGGTAA...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR GCA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATTTCTTTCCCTCACTTTaGCCAGGCTACCTGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: LCNSERHATHAECVHTPHFFPSL*PGYLET Trigger: TGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAA...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR CAA 90 bp | CTACAAGAATGCTGTCCAAGGGGACTGTACAAAGTTTCCCAAAGTTaGCTGCTAGCTTCACAGTATTTATTTCTTTGCCTGACTGTAACC | + |
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Preference number: 2 (lower is better) Translates to: LQECCPRGLYKVSQS*LLASQYLFLCLTVT Trigger: GGTTACAGTCAGGCAAAGAAATAAATACTGTGAAGCTAGCAGCAAACTTTGGGAAACTTTGTACAGTCCCCTTGGACAGCATTCTTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATTTGGTGGATTACAGTTaGAAAGGAGAACCAGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: TWKQLDNCSEDHSPANPHLVDYS*KGEPVL Trigger: TAAGACTGGTTCTCCTTTTCAACTGTAATCCACCAA...ATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR TCA 90 bp | AGACACAGACGTGCACAGACACGTGGCCATTTGACATTTCTGCTCCTGAAATATTTCCTCGAACAGTTCTaGTTTTGCTCTTTGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: RHRRAQTRGHLTFLLLKYFLEQF*FCSLFC Trigger: ACAAAACAAAGAGCAAAATCAGAACTGTTCGAGGAA...ATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATGGACTCTCTTGGTATTaGTGGATTACAGTTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: TWKQLDNCSEDHSPANPHGLSWY*WITVEK Trigger: CTTTTCAACTGTAATCCACCAATACCAAGAGAGTCC...ATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGAAATGTAGGCATGAAGTTGTACAGAATCATCAGAAGTCACACTTGAAACGCATGATCTTGCTCTaGAAATCTCCAGGAGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: CLKCRHEVVQNHQKSHLKRMILL*KSPGGS Trigger: GCTACCTCCTGGAGATTTCCAGAGCAAGATCATGCG...TTTCAAGTGTGACTTCTGATGATTCTGTACAACTTCATGCCTACATTTCAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTATCAATACTCTGTCCCTTTACAACAAGCACCCAAACGTTCTTTAGATATCACCACATGCTTCTTCTaGACAGAATGCCAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GYQYSVPLQQAPKRSLDITTCFF*TECQRR Trigger: TCTCCTTTGGCATTCTGTGCAGAAGAAGCATGTGGT...GATATCTAAAGAACGTTTGGGTGCTTGTTGTAAAGGGACAGAGTATTGATAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR GCA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATGAGAACACTAGGAAATaGAAAGGCTTCACAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LCNSERHATHAECVHTPHENTRK*KGFTTG Trigger: TCCAGTTGTGAAGCCTTTGCATTTCCTAGTGTTCTC...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR GCA 90 bp | AATGGCACAACTGTTTCCAGCAACTGCATGGGACACTTGAGCTATAGGAAATGCAGGAAACATTTCTTCTaGCAGACAAACAGAATCTTT | + |
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Preference number: 2 (lower is better) Translates to: NGTTVSSNCMGHLSYRKCRKHFF*QTNRIF Trigger: AAAGATTCTGTTTGTCTGGCAGAAGAAATGTTTCCT...GCATTTCCTATAGCTCAAGTGTCCCATGCAGTTGCTGGAAACAGTTGTGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CCA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATGACACAGGACTCTCTTaGTATTGGTGGATTACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LCNSERHATHAECVHTPHDTGLS*YWWITV Trigger: AACTGTAATCCACCAATACCAAGAGAGTCCTGTGTC...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATAGCATCCACTGGTCAATaGCACAACTGTTTCCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIASTGQ*HNCFQQ Trigger: TTGCTGGAAACAGTTGTGCCATTGACCAGTGGATGC...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CCA 90 bp | TGCAACATTGTCTACAAGAATGCTGTCCAAGGGGACTGTACAAAGTTTCCCAAAGCTCATCAATTATATTaGCACCCGTCAATCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CNIVYKNAVQGDCTKFPKAHQLY*HPSIFC Trigger: ACAGAAGATTGACGGGTGCCAATATAATTGATGAGC...TTTGGGAAACTTTGTACAGTCCCCTTGGACAGCATTCTTGTAGACAATGTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATAACTGGGAGAGAATGCTaGTTAGTCTGGAACAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NKSLIKVQQQRNEVVGLITGREC*LVWNRR Trigger: TCTTCTGTTCCAGACTAATCAGCATTCTCTCCCAGT...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATAATGATAGCAAAATGCTaGTGCCCCACAAGATCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIMIAKC*CPTRSL Trigger: CAAGGATCTTGTGGGGCATCAGCATTTTGCTATCAT...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR TCA 90 bp | ACATTGTCTACAAGAATGCTGTCCAAGGGGACTGTACAAAGTTTCCCAAAGTTTGCTGTACCTTTTACTTaGTCGTCTTTCTCTGTTACT | + |
|
Preference number: 2 (lower is better) Translates to: TLSTRMLSKGTVQSFPKFAVPFT*SSFSVT Trigger: AGTAACAGAGAAAGACGATCAAGTAAAAGGTACAGC...AAACTTTGGGAAACTTTGTACAGTCCCCTTGGACAGCATTCTTGTAGACAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATCATCTTTGGGAGAAGTaGACACTAGATCCCGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ERSSKDKFMLPVGDPLKDHLWEK*TLDPGK Trigger: TTTGCCGGGATCTAGTGTGCACTTCTCCCAAAGATG...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGAAATGTAGGCATGAAGTTGTACAGAATCATCAGAAGTCACACTTGAAAAAGAAGAGATGTGCTTaGCCTCCAGTTTGCTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: CLKCRHEVVQNHQKSHLKKKRCA*PPVCCI Trigger: TATGCAGCAAACTGGAGGCCAAGCACATCTCTTCTT...TTTCAAGTGTGACTTCTGATGATTCTGTACAACTTCATGCCTACATTTCAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGACTGTACAAAGTTTCCCAAAGTTTGCTGCTAGCTTCACAGTATTTATTTGAAAACTGGATAACTTaGTGGAGAGGCTCATCAATT | + |
|
Preference number: 2 (lower is better) Translates to: RGLYKVSQSLLLASQYLFENWIT*WRGSSI Trigger: AATTGATGAGCCTCTCCAGCAAGTTATCCAGTTTTC...AAATAAATACTGTGAAGCTAGCAGCAAACTTTGGGAAACTTTGTACAGTCCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCTCTCTTGGTATTGGTaGATTACAGTTGAAAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LYLCNSERHATHAECVHTLSWYW*ITVEKE Trigger: CTCCTTTTCAACTGTAATCCACCAATACCAAGAGAG...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CCA 90 bp | AAAAATTGTAGTGCAACATTGTCTACAAGAATGCTGTCCAAGGGGACTGTACAAATCCTTCTTCATCTTTaGGAGAAGTGCACACTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KNCSATLSTRMLSKGTVQILLHL*EKCTLD Trigger: ATCTAGTGTGCACTTCTCCCAAAGATGAAGAAGGAT...TTGTACAGTCCCCTTGGACAGCATTCTTGTAGACAATGTTGCACTACAATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCATATACCTTTCTTTGAATGTCATCAAAGATTTCTGGAGTTGGGTCTTCATGCTGAATACTCGTAGGTaGGTGCCAAAATCATCTACA | + |
|
Preference number: 2 (lower is better) Translates to: FIYLSLNVIKDFWSWVFMLNTRR*VPKSST Trigger: TGTAGATGATTTTGGCACTCACCTACGAGTATTCAG...CATGAAGACCCAACTCCAGAAATCTTTGATGACATTCAAAGAAAGGTATATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTGAAATGTAGGCATGAAGTTGTACAGAATCATCAGAAGTCACACTTGAAAAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: CLKCRHEVVQNHQKSHLKKKNSS*KDFPDK Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...TTTCAAGTGTGACTTCTGATGATTCTGTACAACTTCATGCCTACATTTCAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCCCCAAACACCTGCAGCAAACTTGTAGTGATCAAACTGATATATTCAAGCTACCTGGAAACAACTaGACAATTGTTCTGAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: FFPKHLQQTCSDQTDIFKLPGNN*TIVLKI Trigger: GATCTTCAGAACAATTGTCCAGTTGTTTCCAGGTAG...CTTGAATATATCAGTTTGATCACTACAAGTTTGCTGCAGGTGTTTGGGGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CCA 90 bp | ACACTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAACTGGATAACTTGCTaGAGAGGCTCATCAATTATA | + |
|
Preference number: 2 (lower is better) Translates to: TLERSSKDKFMLPVGDPLNWITC*RGSSII Trigger: TATAATTGATGAGCCTCTCCAGCAAGTTATCCAGTT...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCATATACCTTTCTTTGAATGTCATCAAAGATTTCTGGAGTTGGGTCTTCATGCTCTTAAAAGACCTTTaGTTTGGTTGGTCTGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FIYLSLNVIKDFWSWVFMLLKDL*FGWSAV Trigger: AACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAG...CATGAAGACCCAACTCCAGAAATCTTTGATGACATTCAAAGAAAGGTATATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CCA 72 bp | TCTCTCTGGCGACCTGAGAGAACCTCGAGCTGTTGCTaGGCTGTAACCCGGTACCCTTCCACTGTCATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLWRPERTSSCC*AVTRYPSTVIQ Trigger: CTGGATGACAGTGGAAGGGTACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTCTCAGGTCGCCAGAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR GCA 72 bp | GCTGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTCTaGTGTTTGCCATCTCTCTGGCGACCTGAGAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: AAALKRPLVWLV*CLPSLWRPERT Trigger: GGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CCA 72 bp | CTGTACTCTACTCATCGGTTAAACACTCTACACAGCTaGACCAAGCCTAGGGCCAACGACCACACTCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LYSTHRLNTLHS*TKPRANDHTLL Trigger: CAACAGAGTGTGGTCGTTGGCCCTAGGCTTGGTCCAGCTGTGTAGAGTGTTTAACCGATGAGTAGAGTACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR GCA 72 bp | CTCTTAAAAGACCTTTGGTTTGGTTGGTCTGCTGTTTaGCATCTCTCTGGCGACCTGAGAGAACCTCGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLKDLWFGWSAV*HLSGDLREPRA Trigger: AGCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CCA 72 bp | CAACAGCTGCTGCTCTTAAAAGACCTTTGGTTTGGTTaGTCTGCTGTTTGCCATCTCTCTGGCGACCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QQLLLLKDLWFG*SAVCHLSGDLR Trigger: TCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR GCA 72 bp | CATCCACTGGTCAATGGCACAACTGTTTCCAGCAACTaGATGGGACACTTGAGCTATAGGAAATGCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HPLVNGTTVSSN*MGHLSYRKCSS Trigger: AGATGAGCATTTCCTATAGCTCAAGTGTCCCATGCAGTTGCTGGAAACAGTTGTGCCATTGACCAGTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR GCA 72 bp | CCGGTACCCTTCCACTGTCATCCAGAAGAAGAGATGTaGTTGGCCTCCAGTTTGCTGCATATAATCCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: PVPFHCHPEEEM*LASSLLHIIHK Trigger: TTTATGGATTATATGCAGCAAACTGGAGGCCAAGCACATCTCTTCTTCTGGATGACAGTGGAAGGGTACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR TCA 72 bp | ACATCTCCTCAGTGTTTAGGTTGCGCCGGTGTACAGTaGTGGCATATAGTGCATATGTCTTGCCATGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSPQCLGCAGVQ*WHIVHMSCHDH Trigger: ATGATCATGGCAAGACATATGCACTATATGCCATCACTGTACACCGGCGCAACCTAAACACTGAGGAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CCA 72 bp | CATAAATTCCAACAGCTGCTGCTCTTAAAAGACCTTTaGTTTGGTTGGTCTGCTGTTTGCCATCTCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HKFQQLLLLKDL*FGWSAVCHLSG Trigger: GCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTGTTGGAATTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCCAGGCTACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGATTGGTGGATTACAGTaGAAAAGGAGAACCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LPRLPGNNWTIVLKITHLIGGLQ*KRRTSL Trigger: AAGACTGGTTCTCCTTTTCAACTGTAATCCACCAAT...CAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGTAGCCTGGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CAA 90 bp | GGTTATCAATACTCTGTCCCTTTACAACAAGCACCCAAACGTTCTTTAGATATCTGCCCCACAAGATCCTaGAGGGAGACAAATCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GYQYSVPLQQAPKRSLDICPTRS*RETNLS Trigger: GGAGAGATTTGTCTCCCTCAAGGATCTTGTGGGGCA...GATATCTAAAGAACGTTTGGGTGCTTGTTGTAAAGGGACAGAGTATTGATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATGAGAACCTCGAGCTGTaGCTGGGCTGTAACCCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ERSSKDKFMLPVGDPLKDENLEL*LGCNPV Trigger: TACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTC...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CCA 72 bp | GATGTACTAGGATTCTGTTTTCAGACATGGAAAGACTaGTATAGACACAACAGTACGGGAGTTACACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DVLGFCFQTWKD*YRHNSTGVTPQ Trigger: CTGGGGTGTAACTCCCGTACTGTTGTGTCTATACCAGTCTTTCCATGTCTGAAAACAGAATCCTAGTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| 3UTR-3UTR CAA 90 bp | TGCAACATTGTCTACAAGAATGCTGTCCAAGGGGACTGTACAAAGTTTCCCAAAAAGTATCGCATGATCTaGCTCTGGAAATCTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CNIVYKNAVQGDCTKFPKKYRMI*LWKSPG Trigger: TCCTGGAGATTTCCAGAGCAAGATCATGCGATACTT...TTTGGGAAACTTTGTACAGTCCCCTTGGACAGCATTCTTGTAGACAATGTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR TCA 72 bp | TCATGTAAGAATATAACTGAGACAGGAGGCTGTGTATaGAATTATTGCACTTGTGGCCATGCTGAGGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SCKNITETGGCV*NYCTCGHAEAS Trigger: GGAAGCCTCAGCATGGCCACAAGTGCAATAATTTCATACACAGCCTCCTGTCTCAGTTATATTCTTACATGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR TCA 72 bp | GATCGTCTTTCTCTGTTACTCTCTGTTGGGCCTTTCTaGATACTCGTAGGTGAGTGCCAAAATCATCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: DRLSLLLSVGPF*ILVGECQNHLQ Trigger: TTGTAGATGATTTTGGCACTCACCTACGAGTATTCAGAAAGGCCCAACAGAGAGTAACAGAGAAAGACGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCCCCAAACACCTGCAGCAAACTTGTAGTGATCAAACTGATATATTCAAGATTCTTTCCCTCACTTaGCCCAGGCTACCTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FFPKHLQQTCSDQTDIFKILSLT*PRLPGN Trigger: GTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAAT...CTTGAATATATCAGTTTGATCACTACAAGTTTGCTGCAGGTGTTTGGGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGACTGTACAAAGTTTCCCAAAGTTTGCTGCTAGCTTCACAGTATTTATTTCTCTGTTACTCTCTGTaGGGCCTTTCTGAATACTCG | + |
|
Preference number: 3 (lower is better) Translates to: RGLYKVSQSLLLASQYLFLCYSL*GLSEYS Trigger: CGAGTATTCAGAAAGGCCCAACAGAGAGTAACAGAG...AAATAAATACTGTGAAGCTAGCAGCAAACTTTGGGAAACTTTGTACAGTCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR TCA 72 bp | AGACACAGGACTCTCTTGGTATTGGTGGATTACAGTTaGAAAGGAGAACCAGTCTTACGATGTACTAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: RHRTLLVLVDYS*KGEPVLRCTRI Trigger: AATCCTAGTACATCGTAAGACTGGTTCTCCTTTTCAACTGTAATCCACCAATACCAAGAGAGTCCTGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR TCA 72 bp | CACCCACAAGACATGACCCTGAATGGCTATCATACATaGATCTACAGAGATATAAATACTGACTCTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HPQDMTLNGYHT*IYRDINTDSSQ Trigger: CTGGCTAGAGTCAGTATTTATATCTCTGTAGATTCATGTATGATAGCCATTCAGGGTCATGTCTTGTGGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| 3UTR TCA 72 bp | GTTACTCTCTGTTGGGCCTTTCTGAATACTCGTAGGTaGGTGCCAAAATCATCTACAATGCGTGTAGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VTLCWAFLNTRR*VPKSSTMRVVK Trigger: TTTTACTACACGCATTGTAGATGATTTTGGCACTCACCTACGAGTATTCAGAAAGGCCCAACAGAGAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CCA 72 bp | TTGTTGTTTAAATTAAGGCTAACAAAGTGCATCCACTaGTCAATGGCACAACTGTTTCCAGCAACTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLFKLRLTKCIH*SMAQLFPATAW Trigger: CCATGCAGTTGCTGGAAACAGTTGTGCCATTGACCAGTGGATGCACTTTGTTAGCCTTAATTTAAACAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATATTTGTTTTGGTGAGGTaGCAGTTGTCTTGCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIFVLVR*QLSCRA Trigger: AGCCCTGCAAGACAACTGCAACCTCACCAAAACAAA...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATGATCATTACAAACGCCAGTGTCTGAAATGTAGGCATGAAGTTGTACAGTGCTGTACCTTTTACTaGATCGTCTTTCTCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: CHDHYKRQCLKCRHEVVQCCTFY*IVFLCY Trigger: GTAACAGAGAAAGACGATCAAGTAAAAGGTACAGCA...CTGTACAACTTCATGCCTACATTTCAGACACTGGCGTTTGTAATGATCATGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATGATCATTACAAACGCCAGTGTCTGAAATGTAGGCATGAAGTTGTACAGCCTCATAGTTGCAATTaGAATCACGGATCATCCATA | + |
|
Preference number: 3 (lower is better) Translates to: CHDHYKRQCLKCRHEVVQPHSCN*NHGSSI Trigger: TATGGATGATCCGTGATTCAAATTGCAACTATGAGG...CTGTACAACTTCATGCCTACATTTCAGACACTGGCGTTTGTAATGATCATGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAACATTGTCTACAAGAATGCTGTCCAAGGGGACTGTACAAAGTTTCCCAAAACAGTATTTATTTCTTaGCCTGACTGTAACCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CNIVYKNAVQGDCTKFPKTVFIS*PDCNRC Trigger: ACAGCGGTTACAGTCAGGCAAAGAAATAAATACTGT...TTTGGGAAACTTTGTACAGTCCCCTTGGACAGCATTCTTGTAGACAATGTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGAAATGTAGGCATGAAGTTGTACAGAATCATCAGAAGTCACACTTGAAAGGAAAACTGGATAACTaGCTGGAGAGGCTCATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CLKCRHEVVQNHQKSHLKGKLDN*LERLIN Trigger: ATTGATGAGCCTCTCCAGCAAGTTATCCAGTTTTCC...TTTCAAGTGTGACTTCTGATGATTCTGTACAACTTCATGCCTACATTTCAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAGCTCTTAAAAGACCTTaGGTTTGGTTGGTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLERSSKDKFMLPVGDPLALKRP*VWLVCC Trigger: ACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGC...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATAAGAATCTTTCCTCACTaGCAAGTTTTGAAAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIRIFPH*QVLKGA Trigger: AGCCCCTTTCAAAACTTGCAAGTGAGGAAAGATTCT...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATGGCTCATCAATTATATaGGCACCCGTCAATCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ERSSKDKFMLPVGDPLKDGSSII*APVNLL Trigger: CAGAAGATTGACGGGTGCCAATATAATTGATGAGCC...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR GCA 72 bp | CTTCCTAATGGACAAAATGGAGAGAACACTAGGAAATaGAAAGGCTTCACAACTGGAAAAGGTATTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPNGQNGENTRK*KGFTTGKGICF Trigger: GAAACAAATACCTTTTCCAGTTGTGAAGCCTTTGCATTTCCTAGTGTTCTCTCCATTTTGTCCATTAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCCCCAAACACCTGCAGCAAACTTGTAGTGATCAAACTGATATATTCAAGAGACATATAGCCTCTTaGTGTCTATGTTCATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FFPKHLQQTCSDQTDIFKRHIAS*CLCSSV Trigger: CACAGATGAACATAGACACAAAGAGGCTATATGTCT...CTTGAATATATCAGTTTGATCACTACAAGTTTGCTGCAGGTGTTTGGGGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR TCA 72 bp | GCCAGACAAACAGAATCTTTCCTCACTTGCAAGTTTTaGAAGGGGCTTTACTTATGTAATTCTGAAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: ARQTESFLTCKF*KGLYLCNSERH Trigger: ATGTCTTTCAGAATTACATAAGTAAAGCCCCTTTCAAAACTTGCAAGTGAGGAAAGATTCTGTTTGTCTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGTGCGCCGGTGTACAGTaGTGGCATATAGTGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: PTAEEAMQAGRTVGSRALCAGVQ*WHIVHM Trigger: CATATGCACTATATGCCATCACTGTACACCGGCGCA...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGAGAACCTCGAGCTGTTaGTGGGCTGTAACCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQRTSSC*WAVTRY Trigger: GTACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCT...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR TCA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGTCCATCCCCATCATCTaGTCCTCTGAAACTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PTAEEAMQAGRTVGSRALSIPII*SSETRI Trigger: GATCCTAGTTTCAGAGGATCAGATGATGGGGATGGA...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGATTCCCCATCCCCATATaGATAGACTGGCCTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGFPIPI*IDWPLL Trigger: TAACAGAGGCCAGTCTATCCATATGGGGATGGGGAA...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGCCAGAAGAAGAGATGTaGTTGGCCTCCAGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQPEEEM*LASSLL Trigger: CAGCAAACTGGAGGCCAAGCACATCTCTTCTTCTGG...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGAATCTCTCTGACATTCTaGCCACGTTGTCCGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGISLTF*PRCPTF Trigger: AAATGTCGGACAACGTGGGCAGAATGTCAGAGAGAT...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACTGAATACTCGTAGGTaGGTGCCAAAATCATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGLNTRR*VPKSST Trigger: TGTAGATGATTTTGGCACTCACCTACGAGTATTCAG...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGTTGGTTTGGTTGGTCTaGTGTTTGCCATCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQLVWLV*CLPSLW Trigger: CCAGAGAGATGGCAAACAGCAGACCAACCAAACCAA...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGGACCTTTGGTTTGGTTaGTCTGCTGTTTGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQDLWFG*SAVCHL Trigger: GAGATGGCAAACAGCAGACCAACCAAACCAAAGGTC...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGGTAACTTTAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEEAMQAGRTVGSRALVTLEKGQ*QGFPIP Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTAA...AGTTACCAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGAGAAAACTGGATAACTTaGTGGAGAGGCTCATCAATT | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGENWIT*WRGSSI Trigger: AATTGATGAGCCTCTCCAGCAAGTTATCCAGTTTTC...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGATACTCGTAGGTGAGTaGCAAAATCATCTACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PTAEEAMQAGRTVGSRALILVGE*QNHLQC Trigger: GCATTGTAGATGATTTTGGCACTCACCTACGAGTAT...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTAEEAMQAGRTVGSRALKKNSS*KDFPDK Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGGACTGCTTTATGTCTTaGCCTAATCTCTCTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: PTAEEAMQAGRTVGSRALDCFMS*PNLSDI Trigger: AATGTCAGAGAGATTAGGGCAAGACATAAAGCAGTC...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGAGCTCATCAATTATATTaGCACCCGTCAATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGAHQLY*HPSIFC Trigger: ACAGAAGATTGACGGGTGCCAATATAATTGATGAGC...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGAAAGCTTCAATATGCTTaGCAGATTTTCAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGKLQYA*QIFKLL Trigger: GAGCAGTTTGAAAATCTGTCAAGCATATTGAAGCTT...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGAATAGTGCATATGTCTTaGCATGATCATTACAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGIVHMS*HDHYKR Trigger: GCGTTTGTAATGATCATGGCAAGACATATGCACTAT...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGAAAAGACCTTTGGTTTaGTTGGTCTGCTGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQKRPLV*LVCCLP Trigger: TGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTT...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR TCA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCCTGCTGCCTTATCTCTaGCTGCCTCTAACTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFLLPYL*LPLTLQ Trigger: TTGGAGAGTTAGAGGCAGTCAGAGATAAGGCAGCAG...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCAGCTACTTGTTCCGGTaGGGTCATCCAGTCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFSYLFR*GHPVNM Trigger: CATGTTGACTGGATGACCTCACCGGAACAAGTAGCT...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACAGGAAGCTTCAATATaGTTGACAGATTTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGQEASI*LTDFQT Trigger: AGTTTGAAAATCTGTCAAGCATATTGAAGCTTCCTG...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGCTCTTAAAAGACCTTTaGTTTGGTTGGTCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQLLKDL*FGWSAV Trigger: AACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAG...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGAAAGATTTCTGGAGTTaGGTCTTCATGATTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTAEEAMQAGRTVGSRALKDFWS*VFMIQS Trigger: ACTTTGAATCATGAAGACCCAACTCCAGAAATCTTT...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGGTAACTAACTGGATAACTTGCTaGAGAGGCTCATCAATTATA | + |
|
Preference number: 4 (lower is better) Translates to: AEEAMQAGRTVGSRALVTNWITC*RGSSII Trigger: TATAATTGATGAGCCTCTCCAGCAAGTTATCCAGTT...AGTTACCAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| 3UTR CAA 72 bp | CTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTaGAACGAGACGGGGCAGGATCCTCTCGATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LISLEQKRPTPF*NETGQDPLDVA Trigger: TGCAACATCGAGAGGATCCTGCCCCGTCTCGTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR CAA 72 bp | GCTCTTAAAAGACCTTTGGTTTGGTTGGTCTGCTGTTaGCCATCTCTCTGGCGACCTGAGAGAACCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALKRPLVWLVCC*PSLWRPERTSS Trigger: GCTCGAGGTTCTCTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CAA 72 bp | CCAACAGCTGCTGCTCTTAAAAGACCTTTGGTTTGGTaGGTCTGCTGTTTGCCATCTCTCTGGCGACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAAALKRPLVW*VCCLPSLWRPE Trigger: CTCAGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGCAGCAGCTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| CDS-3UTR GCA 90 bp | GCACTAAGGGCATTCTTTCCCTCACTTTGCCCAGGCTACCTGGAAACAACTGGATTAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRAFFPSLCPGYLETTGLEKGQ*QGFPIP Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTAA...TCCAGTTGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTTAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | AGACACAGACGTGCACAGACACGTGGCCATTTGACATTTCTGCTCCTGAAATATAGCCAGCGCCGGGGATaGCTTCATCATTTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHRRAQTRGHLTFLLLKYSQRRG*LHHFRS Trigger: ACTCCTGAAATGATGAAGGCATCCCCGGCGCTGGCT...ATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCGACAGATTTTCAAACTaGTCAGTGATTCTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMHTALVSIGEPYRKASLDRFSN*SVILMW Trigger: CCACATGAGAATCACTGAGCAGTTTGAAAATCTGTC...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | AGACACAGACGTGCACAGACACGTGGCCATTTGACATTTCTGCTCCTGAAATATCGCATGATCTTGCTCTaGAAATCTCCAGGAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHRRAQTRGHLTFLLLKYRMILL*KSPGGS Trigger: GCTACCTCCTGGAGATTTCCAGAGCAAGATCATGCG...ATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | TGGGAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTTGAACTCCATCCCCATCATCTaGTCCTCTGAAACTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: WERMLISLEQKRPTPFLNSIPII*SSETRI Trigger: GATCCTAGTTTCAGAGGATCAGATGATGGGGATGGA...GTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | TCCCTGACAAAGTATCGCATGATCTTGCTCTGGAAATCTCCAGGAGGTAGCAATTTAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLTKYRMILLWKSPGGSNLEKGQ*QGFPIP Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTAA...ATTGCTACCTCCTGGAGATTTCCAGAGCAAGATCATGCGATACTTTGTCAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTTGAACTTGGTTTGGTTGGTCTaGTGTTTGCCATCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WERMLISLEQKRPTPFLNLVWLV*CLPSLW Trigger: CCAGAGAGATGGCAAACAGCAGACCAACCAAACCAA...GTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | TTGCCCAGGCTACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGTTTTGTCACTCCTTCTaGCAAGCTATCAGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPRLPGNNWTIVLKITHLFCHSF*QAIRKG Trigger: TCCCTTCCTGATAGCTTGGCAGAAGGAGTGACAAAA...CAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGTAGCCTGGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCCAGCATTACCCTAAGTaGAATATTGTCATCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: HMHTALVSIGEPYRKASLQHYPK*NIVIHI Trigger: AATGTGGATGACAATATTCCACTTAGGGTAATGCTG...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR CAA 72 bp | GTGATTTCCTGCACTAAGGGCATTCTTTCCCTCACTTaGCCCAGGCTACCTGGAAACAACTGGACAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VISCTKGILSLT*PRLPGNNWTIV Trigger: AACAATTGTCCAGTTGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTTAGTGCAGGAAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | GGTTATCAATACTCTGTCCCTTTACAACAAGCACCCAAACGTTCTTTAGATATCAGAACCTCGAGCTGTTaGTGGGCTGTAACCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GYQYSVPLQQAPKRSLDIRTSSC*WAVTRY Trigger: GTACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCT...GATATCTAAAGAACGTTTGGGTGCTTGTTGTAAAGGGACAGAGTATTGATAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCCAGGAAGCTTCAATATaGTTGACAGATTTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HMHTALVSIGEPYRKASLQEASI*LTDFQT Trigger: AGTTTGAAAATCTGTCAAGCATATTGAAGCTTCCTG...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | TGGGAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTTGAACATCTCTCTGACATTCTaGCCACGTTGTCCGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: WERMLISLEQKRPTPFLNISLTF*PRCPTF Trigger: AAATGTCGGACAACGTGGGCAGAATGTCAGAGAGAT...GTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTTGAACAAGAAGAGATGTGCTTaGCCTCCAGTTTGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: WERMLISLEQKRPTPFLNKKRCA*PPVCCI Trigger: TATGCAGCAAACTGGAGGCCAAGCACATCTCTTCTT...GTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | CAAGCACCCAAACGTTCTTTAGATATCAGGATACTGGCTCAGTGGTCTGAAAAGGACCTTTGGTTTGGTTaGTCTGCTGTTTGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAPKRSLDIRILAQWSEKDLWFG*SAVCHL Trigger: GAGATGGCAAACAGCAGACCAACCAAACCAAAGGTC...CTTTTCAGACCACTGAGCCAGTATCCTGATATCTAAAGAACGTTTGGGTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATAGCCAGCGCCGGGGATaGCTTCATCATTTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHSQRRG*LHHFRS Trigger: ACTCCTGAAATGATGAAGGCATCCCCGGCGCTGGCT...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACATCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISLRALSPDSKPFKNRSTSLKEN*ITCWRG Trigger: GCCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | GCACTAAGGGCATTCTTTCCCTCACTTTGCCCAGGCTACCTGGAAACAACTGGAAAAGATTTCTGGAGTTaGGTCTTCATGATTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRAFFPSLCPGYLETTGKDFWS*VFMIQS Trigger: ACTTTGAATCATGAAGACCCAACTCCAGAAATCTTT...TCCAGTTGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTTAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | ACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATCTGAATACTCGTAGGTaGGTGCCAAAATCATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TWKQLDNCSEDHSPANPHLNTRR*VPKSST Trigger: TGTAGATGATTTTGGCACTCACCTACGAGTATTCAG...ATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | CAAGCACCCAAACGTTCTTTAGATATCAGGATACTGGCTCAGTGGTCTGAAAAGGGAGTTGGGTCTTCATaGTTCAAAGTATCTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QAPKRSLDIRILAQWSEKGVGSS*FKVSAS Trigger: ACTAGCAGATACTTTGAATCATGAAGACCCAACTCC...CTTTTCAGACCACTGAGCCAGTATCCTGATATCTAAAGAACGTTTGGGTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACAACAAACGCCAGTGTCTaGAATGTAGGCATGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLRALSPDSKPFKNRSTTNASV*NVGMKL Trigger: CAACTTCATGCCTACATTTCAGACACTGGCGTTTGT...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR TCA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACAGCATATGTCTTGCCATaGTCATTACAAACGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLRALSPDSKPFKNRSTAYVLP*SLQTPV Trigger: CACTGGCGTTTGTAATGATCATGGCAAGACATATGC...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR TCA 90 bp | ACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATTTTAGCTGGTTGTGCTaGAACATTTCAAACACGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TWKQLDNCSEDHSPANPHFSWLC*NISNTR Trigger: TCGCGTGTTTGAAATGTTTCAGCACAACCAGCTAAA...ATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATCATCTTTGGGAGAAGTaGACACTAGATCCCGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCNSERHATHAECVHTPHHLWEK*TLDPGK Trigger: TTTGCCGGGATCTAGTGTGCACTTCTCCCAAAGATG...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | AGACACAGACGTGCACAGACACGTGGCCATTTGACATTTCTGCTCCTGAAATATGACTGCTTTATGTCTTaGCCTAATCTCTCTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: RHRRAQTRGHLTFLLLKYDCFMS*PNLSDI Trigger: AATGTCAGAGAGATTAGGGCAAGACATAAAGCAGTC...ATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | AAGCACACATATATGGTAAGGAAGACCACAGCAAACAGGGAAAGATGGACCTTTAAGAAGAGATGTGCTTaGCCTCCAGTTTGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: KHTYMVRKTTANRERWTFKKRCA*PPVCCI Trigger: TATGCAGCAAACTGGAGGCCAAGCACATCTCTTCTT...AAAGGTCCATCTTTCCCTGTTTGCTGTGGTCTTCCTTACCATATATGTGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | AGACACAGACGTGCACAGACACGTGGCCATTTGACATTTCTGCTCCTGAAATATCTCTTAAAAGACCTTTaGTTTGGTTGGTCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHRRAQTRGHLTFLLLKYLLKDL*FGWSAV Trigger: AACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAG...ATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR CAA 72 bp | CGTGCAAGGATTTCCCTGACAAAGTATCGCATGATCTaGCTCTGGAAATCTCCAGGAGGTAGCAATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RARISLTKYRMI*LWKSPGGSNKY Trigger: ATATTTATTGCTACCTCCTGGAGATTTCCAGAGCAAGATCATGCGATACTTTGTCAGGGAAATCCTTGCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| 3UTR CAA 72 bp | TGCTGTCCAAGGGGACTGTACAAAGTTTCCCAAAGTTaGCTGCTAGCTTCACAGTATTTATTTCTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCPRGLYKVSQS*LLASQYLFLCL Trigger: CAGGCAAAGAAATAAATACTGTGAAGCTAGCAGCAAACTTTGGGAAACTTTGTACAGTCCCCTTGGACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATGCTGTACCTTTTACTTaGTCGTCTTTCTCTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: TWKQLDNCSEDHSPANPHAVPFT*SSFSVT Trigger: AGTAACAGAGAAAGACGATCAAGTAAAAGGTACAGC...ATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACAGGAGTTGGGTCTTCATaGTTCAAAGTATCTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRALSPDSKPFKNRSTGVGSS*FKVSAS Trigger: ACTAGCAGATACTTTGAATCATGAAGACCCAACTCC...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATATGCGCCGGTGTACAGTaGTGGCATATAGTGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: NKSLIKVQQQRNEVVGLICAGVQ*WHIVHM Trigger: CATATGCACTATATGCCATCACTGTACACCGGCGCA...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | TGGGAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTTGAACAAGCTTCAATATGCTTaGCAGATTTTCAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WERMLISLEQKRPTPFLNKLQYA*QIFKLL Trigger: GAGCAGTTTGAAAATCTGTCAAGCATATTGAAGCTT...GTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATAGCCAAAATGCATCTCTaGAACGCTTCACCGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIAKMHL*NASPSQ Trigger: CTGACTCGGTGAAGCGTTTCAGAGATGCATTTTGGC...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR GCA 90 bp | CAAGCACCCAAACGTTCTTTAGATATCAGGATACTGGCTCAGTGGTCTGAAAAGGAAAACTGGATAACTTaGTGGAGAGGCTCATCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QAPKRSLDIRILAQWSEKENWIT*WRGSSI Trigger: AATTGATGAGCCTCTCCAGCAAGTTATCCAGTTTTC...CTTTTCAGACCACTGAGCCAGTATCCTGATATCTAAAGAACGTTTGGGTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATACCAGAAGAAGAGATGTaGTTGGCCTCCAGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIPEEEM*LASSLL Trigger: CAGCAAACTGGAGGCCAAGCACATCTCTTCTTCTGG...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CCA 90 bp | GGTTATCAATACTCTGTCCCTTTACAACAAGCACCCAAACGTTCTTTAGATATCTTCCCCATCCCCATATaGATAGACTGGCCTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GYQYSVPLQQAPKRSLDIFPIPI*IDWPLL Trigger: TAACAGAGGCCAGTCTATCCATATGGGGATGGGGAA...GATATCTAAAGAACGTTTGGGTGCTTGTTGTAAAGGGACAGAGTATTGATAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CCA 90 bp | AGGCTCATCAATTATATTGGCACCCGTCAATCTTCTGTCAATCTTTATAGTCCTTTCCCCATCCCCATATaGATAGACTGGCCTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLINYIGTRQSSVNLYSPFPIPI*IDWPLL Trigger: TAACAGAGGCCAGTCTATCCATATGGGGATGGGGAA...AGGACTATAAAGATTGACAGAAGATTGACGGGTGCCAATATAATTGATGAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATGCTCATCAATTATATTaGCACCCGTCAATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TWKQLDNCSEDHSPANPHAHQLY*HPSIFC Trigger: ACAGAAGATTGACGGGTGCCAATATAATTGATGAGC...ATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CCA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTTCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYLCNSERHATHAECVHTSLKEN*ITCWRG Trigger: GCCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CCA 90 bp | ACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGCTAACCCACATATCCTTCTTCATCTTTaGGAGAAGTGCACACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TWKQLDNCSEDHSPANPHILLHL*EKCTLD Trigger: ATCTAGTGTGCACTTCTCCCAAAGATGAAGAAGGAT...ATGTGGGTTAGCAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CCA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATCGCATGATCTTGCTCTaGAAATCTCCAGGAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHRMILL*KSPGGS Trigger: GCTACCTCCTGGAGATTTCCAGAGCAAGATCATGCG...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
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| CDS-3UTR CCA 90 bp | TTGCCCAGGCTACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGGCTCTAATAAGCTGCTaGAGTAAATTCTTGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRLPGNNWTIVLKITHLALISC*SKFLIF Trigger: GAATATCAAGAATTTACTCCAGCAGCTTATTAGAGC...CAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGTAGCCTGGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR TCA 90 bp | AAGCACACATATATGGTAAGGAAGACCACAGCAAACAGGGAAAGATGGACCTTTGCTGTACCTTTTACTTaGTCGTCTTTCTCTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: KHTYMVRKTTANRERWTFAVPFT*SSFSVT Trigger: AGTAACAGAGAAAGACGATCAAGTAAAAGGTACAGC...AAAGGTCCATCTTTCCCTGTTTGCTGTGGTCTTCCTTACCATATATGTGTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
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| CDS-3UTR TCA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTACAAACGCCAGTGTCTaGAATGTAGGCATGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLCNSERHATHAECVHTTNASV*NVGMKL Trigger: CAACTTCATGCCTACATTTCAGACACTGGCGTTTGT...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR TCA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTGCATATGTCTTGCCATaGTCATTACAAACGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLCNSERHATHAECVHTAYVLP*SLQTPV Trigger: CACTGGCGTTTGTAATGATCATGGCAAGACATATGC...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR TCA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACATTTCAAACTGCTCAGTaGTTCTCATGTGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRALSPDSKPFKNRSTFQTAQ*FSCGSH Trigger: ATGACTTCCACATGAGAATCACTGAGCAGTTTGAAA...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
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| CDS-3UTR GCA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATCATCTTTGGGAGAAGTaGACACTAGATCCCGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHHLWEK*TLDPGK Trigger: TTTGCCGGGATCTAGTGTGCACTTCTCCCAAAGATG...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACAGACAGATTTTCAAACTaGTCAGTGATTCTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLRALSPDSKPFKNRSTDRFSN*SVILMW Trigger: CCACATGAGAATCACTGAGCAGTTTGAAAATCTGTC...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACAGAAGTCAGGAACATGTaGAGTATTATCATCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLRALSPDSKPFKNRSTEVRNM*SIIIKL Trigger: CAGCTTGATGATAATACTGCACATGTTCCTGACTTC...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCACCCAAACGTTCTTTAGATATCAGGATACTGGCTCAGTGGTCTGAAAAGTTCCTTCTCAACCACTaGTTTCTCTCTTTTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAPKRSLDIRILAQWSEKFLLNH*FLSFKS Trigger: TGACTTAAAAGAGAGAAACCAGTGGTTGAGAAGGAA...CTTTTCAGACCACTGAGCCAGTATCCTGATATCTAAAGAACGTTTGGGTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTTGAACGTCATCCAGTCAACATaGTCAACTATTTTTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WERMLISLEQKRPTPFLNVIQST*STIFLL Trigger: TAACAGAAAAATAGTTGACCATGTTGACTGGATGAC...GTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATATACTCGTAGGTGAGTaGCAAAATCATCTACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LCNSERHATHAECVHTPHILVGE*QNHLQC Trigger: GCATTGTAGATGATTTTGGCACTCACCTACGAGTAT...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATTTTTGTCACTCCTTCTaGCAAGCTATCAGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHFCHSF*QAIRKG Trigger: TCCCTTCCTGATAGCTTGGCAGAAGGAGTGACAAAA...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR GCA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCAGTCTCTGCTAAAATaGCATTGGGCCAAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYLCNSERHATHAECVHTQSLLK*HWAKMH Trigger: ATGCATTTTGGCCCAATGGCATTTTAGCAGAGACTG...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR CAA 72 bp | AACTGGATAACTTGCTGGAGAGGCTCATCAATTATATaGGCACCCGTCAATCTTCTGTCAATCTTTATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NWITCWRGSSII*APVNLLSIFIV Trigger: GACTATAAAGATTGACAGAAGATTGACGGGTGCCAATATAATTGATGAGCCTCTCCAGCAAGTTATCCAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| CDS-3UTR TCA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTGCTGGAGTAAATTCTTaGTATTCCTTCTCAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: LYLCNSERHATHAECVHTAGVNS*YSFSTT Trigger: AGTGGTTGAGAAGGAATATCAAGAATTTACTCCAGC...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | GGTTATCAATACTCTGTCCCTTTACAACAAGCACCCAAACGTTCTTTAGATATCAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GYQYSVPLQQAPKRSLDIKKNSS*KDFPDK Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...GATATCTAAAGAACGTTTGGGTGCTTGTTGTAAAGGGACAGAGTATTGATAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATAAAAAGACCTTTGGTTTaGTTGGTCTGCTGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIKRPLV*LVCCLP Trigger: TGGCAAACAGCAGACCAACCAAACCAAAGGTCTTTT...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCCTTAATTAAGGTGCAGCAACAACGGAATGAAGTTGTTGGGTTAATATTTCAAACTGCTCAGTaGTTCTCATGTGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKSLIKVQQQRNEVVGLIFQTAQ*FSCGSH Trigger: ATGACTTCCACATGAGAATCACTGAGCAGTTTGAAA...TATTAACCCAACAACTTCATTCCGTTGTTGCTGCACCTTAATTAAGGACTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR GCA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATGTAGCTCTAATAAGCTaGTGGAGTAAATTCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LCNSERHATHAECVHTPHVALIS*WSKFLI Trigger: TATCAAGAATTTACTCCAGCAGCTTATTAGAGCTAC...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATATCCTTCTTCATCTTTaGGAGAAGTGCACACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHILLHL*EKCTLD Trigger: ATCTAGTGTGCACTTCTCCCAAAGATGAAGAAGGAT...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| 3UTR CAA 72 bp | AGGCATGAAGTTGTACAGAATCATCAGAAGTCACACTaGAAAGGTCATCTAAAGACAAATTTATGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHEVVQNHQKSH*KGHLKTNLCFL Trigger: CAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAGTGTGACTTCTGATGATTCTGTACAACTTCATGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221272.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCCCAAACACCTGCAGCAAACTTGTAGTGATCAAACTGATATATTCAAGATAGTGCATATGTCTTaGCATGATCATTACAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHLQQTCSDQTDIFKIVHMS*HDHYKR Trigger: GCGTTTGTAATGATCATGGCAAGACATATGCACTAT...CTTGAATATATCAGTTTGATCACTACAAGTTTGCTGCAGGTGTTTGGGGAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACCTGCAGCAAACTTGTAGTGATCAAACTGATATATTCAAGAACTGGATAACTTGCTaGAGAGGCTCATCAATTATA | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHLQQTCSDQTDIFKNWITC*RGSSII Trigger: TATAATTGATGAGCCTCTCCAGCAAGTTATCCAGTT...CTTGAATATATCAGTTTGATCACTACAAGTTTGCTGCAGGTGTTTGGGGAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| 3UTR CAA 72 bp | TTTCTCACTTTATTTTCACATGTACACACTAGGCTCTaGCATGAATCCTTCTGTATGCACTTAAATGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFSHVHTRL*HESFCMHLNVL Trigger: GAGTACATTTAAGTGCATACAGAAGGATTCATGCAAGAGCCTAGTGTGTACATGTGAAAATAAAGTGAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGGAGAACCTCGAGCTGTaGCTGGGCTGTAACCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQENLEL*LGCNPV Trigger: TACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTC...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGGAACCCCAGATGATGTaGGAGGAAGAAATGAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PTAEEAMQAGRTVGSRALEPQMM*EEEMSV Trigger: AACACTCATTTCTTCCTCCAACATCATCTGGGGTTC...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGAAAGTATCGCATGATCTaGCTCTGGAAATCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGKYRMI*LWKSPG Trigger: TCCTGGAGATTTCCAGAGCAAGATCATGCGATACTT...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACTGAATGAGCGCATTTaGAAGAGTTTGCCTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGLNERI*KSLPNF Trigger: GAAATTAGGCAAACTCTTCAAAATGCGCTCATTCAG...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCCACGGCAGAGGGGCCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGATGCTGTACCTTTTACTaGATCGTCTTTCTCTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VSPRQRGPRQRRLCRQGGCCTFY*IVFLCY Trigger: GTAACAGAGAAAGACGATCAAGTAAAAGGTACAGCA...TCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGGCCCCTCTGCCGTGGACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGACAGTATTTATTTCTTaGCCTGACTGTAACCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTAEEAMQAGRTVGSRALTVFIS*PDCNRC Trigger: ACAGCGGTTACAGTCAGGCAAAGAAATAAATACTGT...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGAATTGTAGTGCAACATaGTCTACAAGAATGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTAEEAMQAGRTVGSRALNCSAT*STRMLS Trigger: GGACAGCATTCTTGTAGACAATGTTGCACTACAATT...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | CCCACGGCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGCATCAGAAGTCACACTaGAAAGGTCATCTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PTAEEAMQAGRTVGSRALHQKSH*KGHLKT Trigger: TGTCTTTAGATGACCTTTCAAGTGTGACTTCTGATG...CAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGAATCCTTCTTCATCTTaGGGAGAAGTGCACACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQNPSSS*GEVHTR Trigger: TCTAGTGTGCACTTCTCCCAAAGATGAAGAAGGATT...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGAGGCTATGCAGGCAGGGAGGACCGTAGGTTCTAGGGCCCTGGTAACTGCTCTTAAAAGACCTTaGGTTTGGTTGGTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AEEAMQAGRTVGSRALVTALKRP*VWLVCC Trigger: ACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGC...AGTTACCAGGGCCCTAGAACCTACGGTCCTCCCTGCCTGCATAGCCTCCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGAAAGTTTCCCAAAGTTaGCTGCTAGCTTCACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQKVSQS*LLASQY Trigger: ATACTGTGAAGCTAGCAGCAAACTTTGGGAAACTTT...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCCGTTGTCCGACATTTTaGTCACTCCTTCTGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFRCPTF*SLLLPS Trigger: GCTTGGCAGAAGGAGTGACAAAAATGTCGGACAACG...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | GCACTAAGGGCATTCTTTCCCTCACTTTGCCCAGGCTACCTGGAAACAACTGGATCCTCAGTGTTTAGGTaGCGCCGGTGTACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ALRAFFPSLCPGYLETTGSSVFR*RRCTVM Trigger: CATCACTGTACACCGGCGCAACCTAAACACTGAGGA...TCCAGTTGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTTAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACAAGAGTCAGGAGAGCAGTAAGTCCACGGCAGAGGGGCCCACGGCAGGAAGCTTCAATATGCTaGACAGATTTTCAAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRTRVRRAVSPRQRGPRQEASIC*TDFQTA Trigger: AGCAGTTTGAAAATCTGTCAAGCATATTGAAGCTTC...CTGCCGTGGGCCCCTCTGCCGTGGACTTACTGCTCTCCTGACTCTTGTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCGGCTCATCAATTATATaGGCACCCGTCAATCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFGSSII*APVNLL Trigger: CAGAAGATTGACGGGTGCCAATATAATTGATGAGCC...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCCTCTGTTACTCTCTGTaGGGCCTTTCTGAATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: HMHTALVSIGEPYRKASLLCYSL*GLSEYS Trigger: CGAGTATTCAGAAAGGCCCAACAGAGAGTAACAGAG...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCAAGTATCGCATGATCTaGCTCTGGAAATCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFKYRMI*LWKSPG Trigger: TCCTGGAGATTTCCAGAGCAAGATCATGCGATACTT...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | AGACACAGACGTGCACAGACACGTGGCCATTTGACATTTCTGCTCCTGAAATATGAGAACCTCGAGCTGTaGCTGGGCTGTAACCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RHRRAQTRGHLTFLLLKYENLEL*LGCNPV Trigger: TACCGGGTTACAGCCCAGCAACAGCTCGAGGTTCTC...ATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCCTGAATGAGCGCATTTaGAAGAGTTTGCCTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFLNERI*KSLPNF Trigger: GAAATTAGGCAAACTCTTCAAAATGCGCTCATTCAG...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCCCTCATAGTTGCAATTaGAATCACGGATCATCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFPHSCN*NHGSSI Trigger: TATGGATGATCCGTGATTCAAATTGCAACTATGAGG...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCCAAACGTTCTTTAGATATCAGGATACTGGCTCAGTGGTCTGAAAAGTGGTTGGTCTGCTGTTaGCCATCTCTCTGGCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: QAPKRSLDIRILAQWSEKWLVCC*PSLWRP Trigger: AGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCA...CTTTTCAGACCACTGAGCCAGTATCCTGATATCTAAAGAACGTTTGGGTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | GGCCGAGGAAGGGCCGGCAGGGCAGGAGCATATGAGTATAGGAAACATTTCTTCCATCAGAAGTCACACTaGAAAGGTCATCTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRAGRAGAYEYRKHFFHQKSH*KGHLKT Trigger: TGTCTTTAGATGACCTTTCAAGTGTGACTTCTGATG...GAAGAAATGTTTCCTATACTCATATGCTCCTGCCCTGCCGGCCCTTCCTCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | AAGCACACATATATGGTAAGGAAGACCACAGCAAACAGGGAAAGATGGACCTTTTGGTTGGTCTGCTGTTaGCCATCTCTCTGGCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: KHTYMVRKTTANRERWTFWLVCC*PSLWRP Trigger: AGGTCGCCAGAGAGATGGCAAACAGCAGACCAACCA...AAAGGTCCATCTTTCCCTGTTTGCTGTGGTCTTCCTTACCATATATGTGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GCACTAAGGGCATTCTTTCCCTCACTTTGCCCAGGCTACCTGGAAACAACTGGATGCTGTACCTTTTACTaGATCGTCTTTCTCTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: ALRAFFPSLCPGYLETTGCCTFY*IVFLCY Trigger: GTAACAGAGAAAGACGATCAAGTAAAAGGTACAGCA...TCCAGTTGTTTCCAGGTAGCCTGGGCAAAGTGAGGGAAAGAATGCCCTTAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACATCCTCAGTGTTTAGGTaGCGCCGGTGTACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISLRALSPDSKPFKNRSTSSVFR*RRCTVM Trigger: CATCACTGTACACCGGCGCAACCTAAACACTGAGGA...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | CATATGCACACAGCACTGGTGAGCATTGGAGAGCCTTACAGGAAGGCTTCCCTCGAAGCTTCAATATGCTaGACAGATTTTCAAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HMHTALVSIGEPYRKASLEASIC*TDFQTA Trigger: AGCAGTTTGAAAATCTGTCAAGCATATTGAAGCTTC...GAGGGAAGCCTTCCTGTAAGGCTCTCCAATGCTCACCAGTGCTGTGTGCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | AGACACAGACGTGCACAGACACGTGGCCATTTGACATTTCTGCTCCTGAAATATGGAAAACTGGATAACTaGCTGGAGAGGCTCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RHRRAQTRGHLTFLLLKYGKLDN*LERLIN Trigger: ATTGATGAGCCTCTCCAGCAAGTTATCCAGTTTTCC...ATATTTCAGGAGCAGAAATGTCAAATGGCCACGTGTCTGTGCACGTCTGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | AAGCACACATATATGGTAAGGAAGACCACAGCAAACAGGGAAAGATGGACCTTTCGTTGTCCGACATTTTaGTCACTCCTTCTGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHTYMVRKTTANRERWTFRCPTF*SLLLPS Trigger: GCTTGGCAGAAGGAGTGACAAAAATGTCGGACAACG...AAAGGTCCATCTTTCCCTGTTTGCTGTGGTCTTCCTTACCATATATGTGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAGAATGCTGATTAGTCTGGAACAGAAGAGACCGACTCCATTCTTGAACTCTGCTAAAATGCCATaGGGCCAAAATGCATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WERMLISLEQKRPTPFLNSAKMP*GQNASL Trigger: CAGAGATGCATTTTGGCCCAATGGCATTTTAGCAGA...GTTCAAGAATGGAGTCGGTCTCTTCTGTTCCAGACTAATCAGCATTCTCTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS TCA 90 bp | TGTCACTCCTTCTGCCAAGCTATCAGGAAGGGATTTGACTGCATTTaGAACATTCCTCATAGAGTTGCGAAGCGGATTTACGAAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CHSFCQAIRKGFDCI*NIPHRVAKRIYESV Trigger: GACACTTTCGTAAATCCGCTTCGCAACTCTATGAGGAATGTTTCAAATGCAGTCAAATCCCTTCCTGATAGCTTGGCAGAAGGAGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048519.17 ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATGAAGAAGAGATGTGCTaGGCCTCCAGTTTGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCNSERHATHAECVHTPHEEEMC*ASSLLH Trigger: ATGCAGCAAACTGGAGGCCAAGCACATCTCTTCTTC...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | TTGCCCAGGCTACCTGGAAACAACTGGACAATTGTTCTGAAGATCACTCACCTGTGCTGGAGTAAATTCTaGATATTCCTTCTCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPRLPGNNWTIVLKITHLCWSKF*IFLLNH Trigger: GTGGTTGAGAAGGAATATCAAGAATTTACTCCAGCA...CAGGTGAGTGATCTTCAGAACAATTGTCCAGTTGTTTCCAGGTAGCCTGGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | ATCTCTTTAAGAGCCCTGAGCCCAGATTCAAAACCATTCAAGAACAGAAGCACAGGCTCATCAATTATATaGGCACCCGTCAATCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISLRALSPDSKPFKNRSTGSSII*APVNLL Trigger: CAGAAGATTGACGGGTGCCAATATAATTGATGAGCC...TGTGCTTCTGTTCTTGAATGGTTTTGAATCTGGGCTCAGGGCTCTTAAAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCCAAACGTTCTTTAGATATCAGGATACTGGCTCAGTGGTCTGAAAAGACATTCCTCATAGAGTaGCGAAGCGGATTTACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QAPKRSLDIRILAQWSEKTFLIE*RSGFTK Trigger: TTTCGTAAATCCGCTTCGCAACTCTATGAGGAATGT...CTTTTCAGACCACTGAGCCAGTATCCTGATATCTAAAGAACGTTTGGGTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS TCA 90 bp | AAATGCATCTCTGAAACGCTTCACCGAGTCAGCTACTTGTTCCGGTaGGGTCATCCAGTCAACATGGTCAACTATTTTTCTGTTAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: KCISETLHRVSYLFR*GHPVNMVNYFSVNS Trigger: ACTATTAACAGAAAAATAGTTGACCATGTTGACTGGATGACCTCACCGGAACAAGTAGCTGACTCGGTGAAGCGTTTCAGAGATGCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS TCA 90 bp | CCTTCTAAGAAGACATACACCATTCTCCTATTTAGCTGGTTGTGCTaGAACATTTCAAACACGCGAAGAATACCTTTCCGTGTTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSKKTYTILLFSWLC*NISNTRRIPFRVVS Trigger: GGAGACAACACGGAAAGGTATTCTTCGCGTGTTTGAAATGTTTCAGCACAACCAGCTAAATAGGAGAATGGTGTATGTCTTCTTAGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATGAACCCCAGATGATGTaGGAGGAAGAAATGAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LCNSERHATHAECVHTPHEPQMM*EEEMSV Trigger: AACACTCATTTCTTCCTCCAACATCATCTGGGGTTC...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATGAAGAAGAGATGTGCTaGGCCTCCAGTTTGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHEEEMC*ASSLLH Trigger: ATGCAGCAAACTGGAGGCCAAGCACATCTCTTCTTC...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | AAGCACACATATATGGTAAGGAAGACCACAGCAAACAGGGAAAGATGGACCTTTACATTCCTCATAGAGTaGCGAAGCGGATTTACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KHTYMVRKTTANRERWTFTFLIE*RSGFTK Trigger: TTTCGTAAATCCGCTTCGCAACTCTATGAGGAATGT...AAAGGTCCATCTTTCCCTGTTTGCTGTGGTCTTCCTTACCATATATGTGTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATCTCTGTTACTCTCTGTaGGGCCTTTCTGAATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHLCYSL*GLSEYS Trigger: CGAGTATTCAGAAAGGCCCAACAGAGAGTAACAGAG...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
||
| CDS-3UTR CAA 90 bp | GGTTATCAATACTCTGTCCCTTTACAACAAGCACCCAAACGTTCTTTAGATATCAATCCTTCTTCATCTTaGGGAGAAGTGCACACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GYQYSVPLQQAPKRSLDINPSSS*GEVHTR Trigger: TCTAGTGTGCACTTCTCCCAAAGATGAAGAAGGATT...GATATCTAAAGAACGTTTGGGTGCTTGTTGTAAAGGGACAGAGTATTGATAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
||
| CDS-3UTR CAA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATAAAGTTTCCCAAAGTTaGCTGCTAGCTTCACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LCNSERHATHAECVHTPHKVSQS*LLASQY Trigger: ATACTGTGAAGCTAGCAGCAAACTTTGGGAAACTTT...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CAA 90 bp | TTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTCCACATAATTGTAGTGCAACATaGTCTACAAGAATGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LCNSERHATHAECVHTPHNCSAT*STRMLS Trigger: GGACAGCATTCTTGTAGACAATGTTGCACTACAATT...ATGTGGAGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CAA 90 bp | TTTTTCCCCAAACACCTGCAGCAAACTTGTAGTGATCAAACTGATATATTCAAGGCTCTTAAAAGACCTTaGGTTTGGTTGGTCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: FFPKHLQQTCSDQTDIFKALKRP*VWLVCC Trigger: ACAGCAGACCAACCAAACCAAAGGTCTTTTAAGAGC...CTTGAATATATCAGTTTGATCACTACAAGTTTGCTGCAGGTGTTTGGGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS CCA 90 bp | CTAATAAGCTGCTGGAGTAAATTCTTGATATTCCTTCTCAACCACTaGTTTCTCTCTTTTAAGTCAAACACCTCATCCATTAGAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LISCWSKFLIFLLNH*FLSFKSNTSSIRSS Trigger: GCTGCTTCTAATGGATGAGGTGTTTGACTTAAAAGAGAGAAACCAGTGGTTGAGAAGGAATATCAAGAATTTACTCCAGCAGCTTATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CAA 90 bp | CTTTACTTATGTAATTCTGAAAGACATGCAACGCATGCTGAGTGTGTGCATACTACAGTATTTATTTCTTaGCCTGACTGTAACCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LYLCNSERHATHAECVHTTVFIS*PDCNRC Trigger: ACAGCGGTTACAGTCAGGCAAAGAAATAAATACTGT...AGTATGCACACACTCAGCATGCGTTGCATGTCTTTCAGAATTACATAAGTAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS-3UTR CAA 90 bp | AAAATAAGGAAAAGATTTAGACACCCACAAGACATGACCCTGAATGGCTATCATCCTCATAGTTGCAATTaGAATCACGGATCATCCATA | + |
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Preference number: 5 (lower is better) Translates to: KIRKRFRHPQDMTLNGYHPHSCN*NHGSSI Trigger: TATGGATGATCCGTGATTCAAATTGCAACTATGAGG...ATGATAGCCATTCAGGGTCATGTCTTGTGGGTGTCTAAATCTTTTCCTTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163677.3 |
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| CDS CAA 90 bp | GACTGCTTTATGTCTTGCCCTAATCTCTCTGACATTCTGCCCACGTaGTCCGACATTTTTGTCACTCCTTCTGCCAAGCTATCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: DCFMSCPNLSDILPT*SDIFVTPSAKLSGR Trigger: CCTTCCTGATAGCTTGGCAGAAGGAGTGACAAAAATGTCGGACAACGTGGGCAGAATGTCAGAGAGATTAGGGCAAGACATAAAGCAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048519.17 ENSMUST00000163677.3 |
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| CDS CAA 90 bp | CGAATAGCTTTATCTCTGCATGGGACAGTCTCTGCTAAAATGCCATaGGGCCAAAATGCATCTCTGAAACGCTTCACCGAGTCAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: RIALSLHGTVSAKMP*GQNASLKRFTESAT Trigger: AGTAGCTGACTCGGTGAAGCGTTTCAGAGATGCATTTTGGCCCAATGGCATTTTAGCAGAGACTGTCCCATGCAGAGATAAAGCTATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS CAA 72 bp | ATCTCTCTGACATTCTGCCCACGTTGTCCGACATTTTaGTCACTCCTTCTGCCAAGCTATCAGGAAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: ISLTFCPRCPTF*SLLLPSYQEGI Trigger: AATCCCTTCCTGATAGCTTGGCAGAAGGAGTGACAAAAATGTCGGACAACGTGGGCAGAATGTCAGAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048519.17 ENSMUST00000163677.3 |
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| CDS CAA 72 bp | TTATCTCTGCATGGGACAGTCTCTGCTAAAATGCCATaGGGCCAAAATGCATCTCTGAAACGCTTCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: LSLHGTVSAKMP*GQNASLKRFTE Trigger: CTCGGTGAAGCGTTTCAGAGATGCATTTTGGCCCAATGGCATTTTAGCAGAGACTGTCCCATGCAGAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS TCA 72 bp | TCTGAAACGCTTCACCGAGTCAGCTACTTGTTCCGGTaGGGTCATCCAGTCAACATGGTCAACTATTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SETLHRVSYLFR*GHPVNMVNYFS Trigger: AGAAAAATAGTTGACCATGTTGACTGGATGACCTCACCGGAACAAGTAGCTGACTCGGTGAAGCGTTTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS GCA 72 bp | ACTGCTTTATGTCTTGCCCTAATCTCTCTGACATTCTaGCCACGTTGTCCGACATTTTTGTCACTCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: TALCLALISLTF*PRCPTFLSLLL Trigger: CAGAAGGAGTGACAAAAATGTCGGACAACGTGGGCAGAATGTCAGAGAGATTAGGGCAAGACATAAAGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048519.17 ENSMUST00000163677.3 |
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| CDS CAA 90 bp | TCCGACATTTTTGTCACTCCTTCTGCCAAGCTATCAGGAAGGGATTaGACTGCATTTGAAACATTCCTCATAGAGTTGCGAAGCGGATTT | + |
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Preference number: 6 (lower is better) Translates to: SDIFVTPSAKLSGRD*TAFETFLIELRSGF Trigger: AAATCCGCTTCGCAACTCTATGAGGAATGTTTCAAATGCAGTCAAATCCCTTCCTGATAGCTTGGCAGAAGGAGTGACAAAAATGTCGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048519.17 ENSMUST00000163677.3 |
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| CDS CAA 72 bp | AGGGATTTGACTGCATTTGAAACATTCCTCATAGAGTaGCGAAGCGGATTTACGAAAGTGTCCATCTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: RDLTAFETFLIE*RSGFTKVSIFR Trigger: TCGAAAGATGGACACTTTCGTAAATCCGCTTCGCAACTCTATGAGGAATGTTTCAAATGCAGTCAAATCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048519.17 ENSMUST00000163677.3 |
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| CDS CAA 90 bp | CTATCAGGAAGGGATTTGACTGCATTTGAAACATTCCTCATAGAGTaGCGAAGCGGATTTACGAAAGTGTCCATCTTTCGAGCAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: LSGRDLTAFETFLIE*RSGFTKVSIFRAKS Trigger: TGATTTTGCTCGAAAGATGGACACTTTCGTAAATCCGCTTCGCAACTCTATGAGGAATGTTTCAAATGCAGTCAAATCCCTTCCTGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048519.17 ENSMUST00000163677.3 |
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| CDS TCA 72 bp | CTAAGTGGAATATTGTCATCCACATTATCATCAAGCTaGGCTGAGACTCGACAATGTTCAGGATCTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: LSGILSSTLSSS*AETRQCSGSES Trigger: TGATTCAGATCCTGAACATTGTCGAGTCTCAGCTCAGCTTGATGATAATGTGGATGACAATATTCCACTTAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS TCA 72 bp | AAGACATACACCATTCTCCTATTTAGCTGGTTGTGCTaGAACATTTCAAACACGCGAAGAATACCTTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: KTYTILLFSWLC*NISNTRRIPFR Trigger: ACGGAAAGGTATTCTTCGCGTGTTTGAAATGTTTCAGCACAACCAGCTAAATAGGAGAATGGTGTATGTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS GCA 72 bp | AGAATACCTTTCCGTGTTGTCTCCGCTCCAATAATGTaGTTCAGTTCATCTGGCATAATTGCAAATAATTTT | + |
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Preference number: 6 (lower is better) Translates to: RIPFRVVSAPIM*FSSSGIIANNF Trigger: AAAATTATTTGCAATTATGCCAGATGAACTGAAGCACATTATTGGAGCGGAGACAACACGGAAAGGTATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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| CDS GCA 72 bp | CTGTTAATAGTATCACCATATGTAGCTCTAATAAGCTaGTGGAGTAAATTCTTGATATTCCTTCTCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: LLIVSPYVALIS*WSKFLIFLLNH Trigger: GTGGTTGAGAAGGAATATCAAGAATTTACTCCAGCAGCTTATTAGAGCTACATATGGTGATACTATTAACAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048519.17 |
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