Pregenerated sensors for SNX12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046032Ensembl transcript IDs: ENSMUST00000077876.4, ENSMUST00000120389.8, ENSMUST00000156473.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGCAGAGCGCCCACACGGTGTAGTCTGGTACCAAGGGGCACAATaGAGGACGGTCTATCAAGCCAGGGGATGGGTAGCCAACTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: LAERPHGVVWYQGAQ*RTVYQARGWVANFR Trigger: TCTGAAGTTGGCTACCCATCCCCTGGCTTGATAGACCGTCCTGCATTGTGCCCCTTGGTACCAGACTACACCGTGTGGGCGCTCTGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTaGGTGCGTGCTTCTGCCCTTGGGGCAGTACTAAATGACATGGGA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCVCARA*VRASALGAVLNDMG Trigger: TCCCATGTCATTTAGTACTGCCCCAAGGGCAGAAGCACGCACGCACGCGCGCGCACACACACACACACACACACACACACACACACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR TCA 90 bp | ACTGGAGTTCAACAGGAAACAAGTACAGGCAGTTCAATAACCCTGTaGCCAAGCTGGGGAAGGCAGCAGACAACTCTTGCTCCTGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: TGVQQETSTGSSITL*PSWGRQQTTLAPEP Trigger: GGGCTCAGGAGCAAGAGTTGTCTGCTGCCTTCCCCAGCTTGGTCACAGGGTTATTGAACTGCCTGTACTTGTTTCCTGTTGAACTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CCA 90 bp | AACTTACAACTGGTACCAGAGTTAACTTGTTCTCATCCCACCACTTaGACAGACAGCAGGCCCCAGCAAACAAACCACCACCTCCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: NLQLVPELTCSHPTT*TDSRPQQTNHHLPN Trigger: GTTTGGGAGGTGGTGGTTTGTTTGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACCAGTTGTAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR TCA 90 bp | GGCTCAGCAGCTAGAGAGCTAATCTATCTCAAGGATCTTCAACACTaGGGTGGGTTCCAAGTCCCCTGTCAAAATCTAATCCTGATCTCT | + |
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Preference number: 1 (lower is better) Translates to: GSAARELIYLKDLQH*GGFQVPCQNLILIS Trigger: AGAGATCAGGATTAGATTTTGACAGGGGACTTGGAACCCACCTCAGTGTTGAAGATCCTTGAGATAGATTAGCTCTCTAGCTGCTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAGTTAACTTGTTCTCATCCCACCACTTGGACAGACAGCAGGCCCCAGCAGTGCGCGCGCGTGCGTaGGTGCTTCTGCCCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TRVNLFSSHHLDRQQAPAVRARA*VLLPLG Trigger: CCCCAAGGGCAGAAGCACGCACGCACGCGCGCGCAC...TGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAACACTGGAGTTCAACAGGAAACAAGTACAGGCAGTTCAATAACCCTGCCGACACTGGCGAGGTaGGAAAGGGGCTACTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GDNTGVQQETSTGSSITLPTLAR*ERGYSA Trigger: AGCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGG...CAGGGTTATTGAACTGCCTGTACTTGTTTCCTGTTGAACTCCAGTGTTGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR TCA 90 bp | GATCTCTCTGACCAGGGTCACACCAGACTCAGCAATCCTTTTCCCCAAGGACCTTGGGGCAGTACTAAATaGCATGGGAAAGGAGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: DLSDQGHTRLSNPFPQGPWGSTK*HGKGGM Trigger: CATTCCTCCTTTCCCATGTCATTTAGTACTGCCCCA...AGGTCCTTGGGGAAAAGGATTGCTGAGTCTGGTGTGACCCTGGTCAGAGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAGTTAACTTGTTCTCATCCCACCACTTGGACAGACAGCAGGCCCCAGCACAAGCAAAGAACATCTaGCTGTGGTTTCCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: TRVNLFSSHHLDRQQAPAQAKNI*LWFPTS Trigger: AGAGGTGGGAAACCACAGGCAGATGTTCTTTGCTTG...TGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 90 bp | CAACTTACAACTGGTACCAGAGTTAACTTGTTCTCATCCCACCACTaGGACAGACAGCAGGCCCCAGCAAACAAACCACCACCTCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: QLTTGTRVNLFSSHH*DRQQAPANKPPPPK Trigger: TTTGGGAGGTGGTGGTTTGTTTGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACCAGTTGTAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 90 bp | AGTCTAAGCCAAGAGTCCCAACTTACAACTGGTACCAGAGTTAACTaGTTCTCATCCCACCACTTGGACAGACAGCAGGCCCCAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: SLSQESQLTTGTRVN*FSSHHLDRQQAPAN Trigger: GTTTGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACCAGTTGTAAGTTGGGACTCTTGGCTTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGAGCCTCAGAGTCTCAGCACTTGTGCACAATGAAAGGAGAAATCTTTCCGACACTGGCGAGGTaGGAAAGGGGCTACTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RNGASESQHLCTMKGEIFPTLAR*ERGYSA Trigger: AGCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGG...AAAGATTTCTCCTTTCATTGTGCACAAGTGCTGAGACTCTGAGGCTCCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTCAAAAGTGCTTAGGAGAAATGAGAAAGTGGTGTGTGTGTGTGTGTGTGAAGGATCTTCAACACTaGGGTGGGTTCCAAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TAQKCLGEMRKWCVCVCVKDLQH*GGFQVP Trigger: GGGGACTTGGAACCCACCTCAGTGTTGAAGATCCTT...CACACACACACACACACACCACTTTCTCATTTCTCCTAAGCACTTTTGAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 90 bp | CCATTGACGATGGGCCCAGAAAACCCATACATCCTGCTCTACACATaGAACTGCTTAAACTCTAGGATTGCTGCCATGAAAAGCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: PLTMGPENPYILLYT*NCLNSRIAAMKSNR Trigger: CCTGTTGCTTTTCATGGCAGCAATCCTAGAGTTTAAGCAGTTCAATGTGTAGAGCAGGATGTATGGGTTTTCTGGGCCCATCGTCAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAACACTGGAGTTCAACAGGAAACAAGTACAGGCAGTTCAATAACCCTGGGAGAAATGAGAAAGTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GDNTGVQQETSTGSSITLGEMRK*CVCVCV Trigger: CACACACACACACACACACCACTTTCTCATTTCTCC...CAGGGTTATTGAACTGCCTGTACTTGTTTCCTGTTGAACTCCAGTGTTGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR GCA 90 bp | GACGATGGGCCCAGAAAACCCATACATCCTGCTCTACACATTGAACTGCTTAAAGAGTCTCAGCACTTGTaGACAATGAAAGGAGAAATC | + |
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Preference number: 2 (lower is better) Translates to: DDGPRKPIHPALHIELLKESQHL*TMKGEI Trigger: GATTTCTCCTTTCATTGTGCACAAGTGCTGAGACTC...TTTAAGCAGTTCAATGTGTAGAGCAGGATGTATGGGTTTTCTGGGCCCATCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAACAGCTCAAAAGTGCTTAGGAGAAATGAGAAAGTGGTGTGTGTGTGTGTGTATCAAGCCAGGGGATaGGTAGCCAACTTCAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: FNSSKVLRRNEKVVCVCVYQARG*VANFRS Trigger: TGATCTGAAGTTGGCTACCCATCCCCTGGCTTGATA...CACACACACACACACCACTTTCTCATTTCTCCTAAGCACTTTTGAGCTGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 90 bp | CGAGTCATGTCAAAACTGGACTTTGACAATAGGGTCTCTACTGATTaGTTCATACTTCATGAGATGAAGATGATAGTAGTGATGTCATTC | + |
|
Preference number: 2 (lower is better) Translates to: RVMSKLDFDNRVSTD*FILHEMKMIVVMSF Trigger: GAATGACATCACTACTATCATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGACATGACTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTaGGTGCGTGCTTCTGCCCTTGGGGCAGTACTAAAT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCARA*VRASALGAVLN Trigger: ATTTAGTACTGCCCCAAGGGCAGAAGCACGCACGCACGCGCGCGCACACACACACACACACACACACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CCA 72 bp | AATCAAAAGGCAGCAAGGACACCGACACTGGCGAGGTaGGAAAGGGGCTACTCAGCTACCAGCATGGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: NQKAARTPTLAR*ERGYSATSMGS Trigger: TGAGCCCATGCTGGTAGCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGGTGTCCTTGCTGCCTTTTGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| 3UTR CCA 72 bp | CTGGTACCAGAGTTAACTTGTTCTCATCCCACCACTTaGACAGACAGCAGGCCCCAGCAAACAAACCACCAC | + |
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Preference number: 3 (lower is better) Translates to: LVPELTCSHPTT*TDSRPQQTNHH Trigger: GTGGTGGTTTGTTTGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR TCA 72 bp | CAACAGGAAACAAGTACAGGCAGTTCAATAACCCTGTaGCCAAGCTGGGGAAGGCAGCAGACAACTCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: QQETSTGSSITL*PSWGRQQTTLA Trigger: AGCAAGAGTTGTCTGCTGCCTTCCCCAGCTTGGTCACAGGGTTATTGAACTGCCTGTACTTGTTTCCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR CAA 90 bp | GGTACCAGAGTTAACTTGTTCTCATCCCACCACTTGGACAGACAGCAGGCCCCAAGGAGGAAAATGATGTaGCTCTTCCTTACCATCAAG | + |
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Preference number: 3 (lower is better) Translates to: GTRVNLFSSHHLDRQQAPRRKMM*LFLTIK Trigger: CTTGATGGTAAGGAAGAGCAACATCATTTTCCTCCT...TGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR CAA 90 bp | GGTACCAGAGTTAACTTGTTCTCATCCCACCACTTGGACAGACAGCAGGCCCCAAGAAGAATGAACAATTaGCTGAATAAAAGCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: GTRVNLFSSHHLDRQQAPRRMNN*LNKSPK Trigger: CTTGGGGCTTTTATTCAGCAAATTGTTCATTCTTCT...TGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTCAAAAGTGCTTAGGAGAAATGAGAAAGTGGTGTGTGTGTGTGTGTGTGTCAGAGTCTCAGCACTaGTGCACAATGAAAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: TAQKCLGEMRKWCVCVCVSESQH*CTMKGE Trigger: TTCTCCTTTCATTGTGCACAAGTGCTGAGACTCTGA...CACACACACACACACACACCACTTTCTCATTTCTCCTAAGCACTTTTGAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR TCA 72 bp | GCTAGAGAGCTAATCTATCTCAAGGATCTTCAACACTaGGGTGGGTTCCAAGTCCCCTGTCAAAATCTAATC | + |
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Preference number: 3 (lower is better) Translates to: ARELIYLKDLQH*GGFQVPCQNLI Trigger: GATTAGATTTTGACAGGGGACTTGGAACCCACCTCAGTGTTGAAGATCCTTGAGATAGATTAGCTCTCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTCTACTGATTTGTTCATACTTCATGAGATGAAGATGATAGTAGTGATGTCAGATCCTGACTCCATCTaGTACTGTAGCATTGACCTT | + |
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Preference number: 3 (lower is better) Translates to: VSTDLFILHEMKMIVVMSDPDSI*YCSIDL Trigger: AAGGTCAATGCTACAGTACAAGATGGAGTCAGGATC...TGACATCACTACTATCATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR TCA 90 bp | ACACTGGCGAGGTGGGAAAGGGGCTACTCAGCTACCAGCATGGGCTCAGCAGCTGAACCTCATAGGTGGTaGAGCGCGCGCGGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: TLARWERGYSATSMGSAAEPHRW*SARGPR Trigger: GCGTGGGCCGCGCGCGCTTCACCACCTATGAGGTTC...AGCTGCTGAGCCCATGCTGGTAGCTGAGTAGCCCCTTTCCCACCTCGCCAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | CCGACACTGGCGAGGTGGGAAAGGGGCTACTCAGCTACCAGCATGGGCTCAGCAGCGTCGGTCAGGTCTTaGGGCTTCGAGTTAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PTLARWERGYSATSMGSAASVRS*GFELRR Trigger: GCGCCTTAACTCGAAGCCCCAAGACCTGACCGACGC...TGCTGAGCCCATGCTGGTAGCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | CCGACACTGGCGAGGTGGGAAAGGGGCTACTCAGCTACCAGCATGGGCTCAGCATCTCCAGGAAGTTACTaGGCGGCCCGTAAGCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PTLARWERGYSATSMGSASPGSY*AARKRR Trigger: CCGACGCTTACGGGCCGCCCAGTAACTTCCTGGAGA...TGCTGAGCCCATGCTGGTAGCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR TCA 90 bp | AGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGGGTCACACCAGACTCGAACCTCATAGGTGGTaGAGCGCGCGCGGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: SPLSKSNPDLSDQGHTRLEPHRW*SARGPR Trigger: GCGTGGGCCGCGCGCGCTTCACCACCTATGAGGTTC...GAGTCTGGTGTGACCCTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR TCA 90 bp | TGGGAAAGGGGCTACTCAGCTACCAGCATGGGCTCAGCAGCTAGAGAGCTAATCAGACAGCGTTCATTCTaGGCCAGTGGGTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: WERGYSATSMGSAARELIRQRSF*ASGCPA Trigger: TGCTGGGCACCCACTGGCTCAGAATGAACGCTGTCT...GATTAGCTCTCTAGCTGCTGAGCCCATGCTGGTAGCTGAGTAGCCCCTTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR GCA 90 bp | CCGACACTGGCGAGGTGGGAAAGGGGCTACTCAGCTACCAGCATGGGCTCAGCAAACTGTTCGAGGCCTTaGCTCCTTTCTTCAATGAAA | + |
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Preference number: 4 (lower is better) Translates to: PTLARWERGYSATSMGSANCSRP*LLSSMK Trigger: TTTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTT...TGCTGAGCCCATGCTGGTAGCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR GCA 90 bp | TCAAAAGGCAGCAAGGACACCGACACTGGCGAGGTGGGAAAGGGGCTACTCAGCTCAATTGCCTCCTCCTaGAGGAACATGTGTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SKGSKDTDTGEVGKGLLSSIASS*RNMCRQ Trigger: CTGTCTACACATGTTCCTGCAGGAGGAGGCAATTGA...GCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGGTGTCCTTGCTGCCTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGGGTCACACCAGAGCGTCGGTCAGGTCTTaGGGCTTCGAGTTAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PSPLSKSNPDLSDQGHTRASVRS*GFELRR Trigger: GCGCCTTAACTCGAAGCCCCAAGACCTGACCGACGC...TCTGGTGTGACCCTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGTGGGTTCCAAGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGTCTCCAGGAAGTTACTaGGCGGCCCGTAAGCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LRWVPSPLSKSNPDLSDQSPGSY*AARKRR Trigger: CCGACGCTTACGGGCCGCCCAGTAACTTCCTGGAGA...CTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACTTGGAACCCACCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR TCA 90 bp | CCAAGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGGGTCACACCAGAAGACAGCGTTCATTCTaGGCCAGTGGGTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSPLSKSNPDLSDQGHTRRQRSF*ASGCPA Trigger: TGCTGGGCACCCACTGGCTCAGAATGAACGCTGTCT...TCTGGTGTGACCCTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | TCAAAAGGCAGCAAGGACACCGACACTGGCGAGGTGGGAAAGGGGCTACTCAGCTTTCCCAGGCAGTGGTaGTACTACGATCTTACTATC | + |
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Preference number: 4 (lower is better) Translates to: SKGSKDTDTGEVGKGLLSFPRQW*YYDLTI Trigger: GATAGTAAGATCGTAGTACCACCACTGCCTGGGAAA...GCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGGTGTCCTTGCTGCCTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR GCA 90 bp | TCAAAAGGCAGCAAGGACACCGACACTGGCGAGGTGGGAAAGGGGCTACTCAGCAACTGTTCGAGGCCTTaGCTCCTTTCTTCAATGAAA | + |
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Preference number: 4 (lower is better) Translates to: SKGSKDTDTGEVGKGLLSNCSRP*LLSSMK Trigger: TTTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTT...GCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGGTGTCCTTGCTGCCTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| 3UTR CAA 72 bp | ACTGGTACCAGAGTTAACTTGTTCTCATCCCACCACTaGGACAGACAGCAGGCCCCAGCAAACAAACCACCA | + |
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Preference number: 4 (lower is better) Translates to: TGTRVNLFSSHH*DRQQAPANKPP Trigger: TGGTGGTTTGTTTGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR TCA 90 bp | GACTTTGACAATAGGGTCTCTACTGATTTGTTCATACTTCATGAGATGAAGATGGAACCTCATAGGTGGTaGAGCGCGCGCGGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: DFDNRVSTDLFILHEMKMEPHRW*SARGPR Trigger: GCGTGGGCCGCGCGCGCTTCACCACCTATGAGGTTC...CATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR TCA 90 bp | ACCAGAGTTAACTTGTTCTCATCCCACCACTTGGACAGACAGCAGGCCCCAGCAGCCTCCTTTCTTCAATaGAAGACTCCTCAAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: TRVNLFSSHHLDRQQAPAASFLQ*KTPQRS Trigger: GGATCTTTGAGGAGTCTTTCATTGAAGAAAGGAGGC...TGCTGGGGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 72 bp | CAAGAGTCCCAACTTACAACTGGTACCAGAGTTAACTaGTTCTCATCCCACCACTTGGACAGACAGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QESQLTTGTRVN*FSSHHLDRQQA Trigger: GGCCTGCTGTCTGTCCAAGTGGTGGGATGAGAACAAGTTAACTCTGGTACCAGTTGTAAGTTGGGACTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR GCA 90 bp | CAGAGGATAAAAATCAAAAGGCAGCAAGGACACCGACACTGGCGAGGTGGGAAATCAATTGCCTCCTCCTaGAGGAACATGTGTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: QRIKIKRQQGHRHWRGGKSIASS*RNMCRQ Trigger: CTGTCTACACATGTTCCTGCAGGAGGAGGCAATTGA...TTTCCCACCTCGCCAGTGTCGGTGTCCTTGCTGCCTTTTGATTTTTATCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | AGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGGGTCACACCAGACTCCACGCCCACCGTCTGTaGATTAAAGATGTCTATCTC | + |
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Preference number: 4 (lower is better) Translates to: SPLSKSNPDLSDQGHTRLHAHRL*IKDVYL Trigger: GAGATAGACATCTTTAATCCACAGACGGTGGGCGTG...GAGTCTGGTGTGACCCTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 72 bp | CTCCCACCATTCAGAAAGTCACCTGGCAGTGATAAGTaGCTCTTGTCCCTCAAAACCCACAAAGCTAACCCA | + |
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Preference number: 4 (lower is better) Translates to: LPPFRKSPGSDK*LLSLKTHKANP Trigger: TGGGTTAGCTTTGTGGGTTTTGAGGGACAAGAGCAACTTATCACTGCCAGGTGACTTTCTGAATGGTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGATAAAAATCAAAAGGCAGCAAGGACACCGACACTGGCGAGGTGGGAAAGCCTCCTTTCTTCAATaGAAGACTCCTCAAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QRIKIKRQQGHRHWRGGKASFLQ*KTPQRS Trigger: GGATCTTTGAGGAGTCTTTCATTGAAGAAAGGAGGC...TTTCCCACCTCGCCAGTGTCGGTGTCCTTGCTGCCTTTTGATTTTTATCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGTGGGTTCCAAGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGGTAGTTCCTATCAATTaGCTCCTCCTGCAGGAACAT | + |
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Preference number: 4 (lower is better) Translates to: LRWVPSPLSKSNPDLSDQVVPIN*LLLQEH Trigger: ATGTTCCTGCAGGAGGAGGCAATTGATAGGAACTAC...CTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACTTGGAACCCACCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | ATTGACGATGGGCCCAGAAAACCCATACATCCTGCTCTACACATTGAACTGCTTGGCTTTCCCAGGCAGTaGTGGTACTACGATCTTACT | + |
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Preference number: 4 (lower is better) Translates to: IDDGPRKPIHPALHIELLGFPRQ*WYYDLT Trigger: AGTAAGATCGTAGTACCACCACTGCCTGGGAAAGCC...AAGCAGTTCAATGTGTAGAGCAGGATGTATGGGTTTTCTGGGCCCATCGTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | ACACAGAAGAAATGGAGCCTCAGAGTCTCAGCACTTGTGCACAATGAAAGGAGACACGCCCACCGTCTGTaGATTAAAGATGTCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQKKWSLRVSALVHNERRHAHRL*IKDVYL Trigger: GAGATAGACATCTTTAATCCACAGACGGTGGGCGTG...TCTCCTTTCATTGTGCACAAGTGCTGAGACTCTGAGGCTCCATTTCTTCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | GTCTCTACTGATTTGTTCATACTTCATGAGATGAAGATGATAGTAGTGATGTCAGCGTCGGTCAGGTCTTaGGGCTTCGAGTTAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTDLFILHEMKMIVVMSASVRS*GFELRR Trigger: GCGCCTTAACTCGAAGCCCCAAGACCTGACCGACGC...TGACATCACTACTATCATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| 3UTR CAA 72 bp | CCATTCAGAAAGTCACCTGGCAGTGATAAGTTGCTCTaGTCCCTCAAAACCCACAAAGCTAACCCACAAAAG | + |
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Preference number: 4 (lower is better) Translates to: PFRKSPGSDKLL*SLKTHKANPQK Trigger: CTTTTGTGGGTTAGCTTTGTGGGTTTTGAGGGACAAGAGCAACTTATCACTGCCAGGTGACTTTCTGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR TCA 90 bp | GTCTCTACTGATTTGTTCATACTTCATGAGATGAAGATGATAGTAGTGATGTCAAGACAGCGTTCATTCTaGGCCAGTGGGTGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTDLFILHEMKMIVVMSRQRSF*ASGCPA Trigger: TGCTGGGCACCCACTGGCTCAGAATGAACGCTGTCT...TGACATCACTACTATCATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR CCA 90 bp | TTCTGGGGACAACACTGGAGTTCAACAGGAAACAAGTACAGGCAGTTCAATAACTTTCCCAGGCAGTGGTaGTACTACGATCTTACTATC | + |
|
Preference number: 4 (lower is better) Translates to: FWGQHWSSTGNKYRQFNNFPRQW*YYDLTI Trigger: GATAGTAAGATCGTAGTACCACCACTGCCTGGGAAA...GTTATTGAACTGCCTGTACTTGTTTCCTGTTGAACTCCAGTGTTGTCCCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 72 bp | ATGGGCCCAGAAAACCCATACATCCTGCTCTACACATaGAACTGCTTAAACTCTAGGATTGCTGCCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MGPENPYILLYT*NCLNSRIAAMK Trigger: TTTCATGGCAGCAATCCTAGAGTTTAAGCAGTTCAATGTGTAGAGCAGGATGTATGGGTTTTCTGGGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR GCA 90 bp | TTCAACAGCTCAAAAGTGCTTAGGAGAAATGAGAAAGTGGTGTGTGTGTGTGTGGTAGTTCCTATCAATTaGCTCCTCCTGCAGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FNSSKVLRRNEKVVCVCVVVPIN*LLLQEH Trigger: ATGTTCCTGCAGGAGGAGGCAATTGATAGGAACTAC...CACACACACACACACCACTTTCTCATTTCTCCTAAGCACTTTTGAGCTGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| 3UTR CAA 72 bp | ATAGTAGTGATGTCATTCTGTGATCCTGACTCCATCTaGTACTGTAGCATTGACCTTGTGAACTTGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: IVVMSFCDPDSI*YCSIDLVNLLT Trigger: TGTCAGCAAGTTCACAAGGTCAATGCTACAGTACAAGATGGAGTCAGGATCACAGAATGACATCACTACTAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR CCA 90 bp | GTCATGTCAAAACTGGACTTTGACAATAGGGTCTCTACTGATTTGTTCATACTTCACGCCCACCGTCTGTaGATTAAAGATGTCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VMSKLDFDNRVSTDLFILHAHRL*IKDVYL Trigger: GAGATAGACATCTTTAATCCACAGACGGTGGGCGTG...AAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGACATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR CCA 90 bp | AGAAGAATGAACAATTTGCTGAATAAAAGCCCCAAGTCAGGATATATACACAGAGGCTTTCCCAGGCAGTaGTGGTACTACGATCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: RRMNNLLNKSPKSGYIHRGFPRQ*WYYDLT Trigger: AGTAAGATCGTAGTACCACCACTGCCTGGGAAAGCC...TCTGTGTATATATCCTGACTTGGGGCTTTTATTCAGCAAATTGTTCATTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CCA 90 bp | GTCTCTACTGATTTGTTCATACTTCATGAGATGAAGATGATAGTAGTGATGTCAGGCTTTCCCAGGCAGTaGTGGTACTACGATCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: VSTDLFILHEMKMIVVMSGFPRQ*WYYDLT Trigger: AGTAAGATCGTAGTACCACCACTGCCTGGGAAAGCC...TGACATCACTACTATCATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR GCA 90 bp | GACTTTGACAATAGGGTCTCTACTGATTTGTTCATACTTCATGAGATGAAGATGGTAGTTCCTATCAATTaGCTCCTCCTGCAGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DFDNRVSTDLFILHEMKMVVPIN*LLLQEH Trigger: ATGTTCCTGCAGGAGGAGGCAATTGATAGGAACTAC...CATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR CCA 90 bp | GTCATGTCAAAACTGGACTTTGACAATAGGGTCTCTACTGATTTGTTCATACTTTTTCCCAGGCAGTGGTaGTACTACGATCTTACTATC | + |
|
Preference number: 4 (lower is better) Translates to: VMSKLDFDNRVSTDLFILFPRQW*YYDLTI Trigger: GATAGTAAGATCGTAGTACCACCACTGCCTGGGAAA...AAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGACATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| 3UTR CAA 72 bp | TTCAGACTTCAGACCGAGTCATGTCAAAACTGGACTTaGACAATAGGGTCTCTACTGATTTGTTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRLQTESCQNWT*TIGSLLICSYF Trigger: GAAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGACATGACTCGGTCTGAAGTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR GCA 90 bp | GTCATGTCAAAACTGGACTTTGACAATAGGGTCTCTACTGATTTGTTCATACTTAACTGTTCGAGGCCTTaGCTCCTTTCTTCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VMSKLDFDNRVSTDLFILNCSRP*LLSSMK Trigger: TTTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTT...AAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGACATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| 3UTR CAA 72 bp | TCAAAACTGGACTTTGACAATAGGGTCTCTACTGATTaGTTCATACTTCATGAGATGAAGATGATAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKLDFDNRVSTD*FILHEMKMIVV Trigger: CACTACTATCATCTTCATCTCATGAAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| 3UTR CAA 72 bp | TTGAATATGACATTGTCTGACAGAAGAATGAACAATTaGCTGAATAAAAGCCCCAAGTCAGGATATATACAC | + |
|
Preference number: 4 (lower is better) Translates to: LNMTLSDRRMNN*LNKSPKSGYIH Trigger: GTGTATATATCCTGACTTGGGGCTTTTATTCAGCAAATTGTTCATTCTTCTGTCAGACAATGTCATATTCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CAA 90 bp | TCAAAAGGCAGCAAGGACACCGACACTGGCGAGGTGGGAAAGGGGCTACTCAGCAGCGTCGGTCAGGTCTaGGGGCTTCGAGTTAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKGSKDTDTGEVGKGLLSSVGQV*GLRVKA Trigger: CGCCTTAACTCGAAGCCCCAAGACCTGACCGACGCT...GCTGAGTAGCCCCTTTCCCACCTCGCCAGTGTCGGTGTCCTTGCTGCCTTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CAA 90 bp | TTCAACAGCTCAAAAGTGCTTAGGAGAAATGAGAAAGTGGTGTGTGTGTGTGTGAGCGTCGGTCAGGTCTaGGGGCTTCGAGTTAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FNSSKVLRRNEKVVCVCVSVGQV*GLRVKA Trigger: CGCCTTAACTCGAAGCCCCAAGACCTGACCGACGCT...CACACACACACACACCACTTTCTCATTTCTCCTAAGCACTTTTGAGCTGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR CAA 90 bp | CCAAGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGGGTCACACCAGACGTAGTTCCTATCAATaGCCTCCTCCTGCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PSPLSKSNPDLSDQGHTRRSSYQ*PPPAGT Trigger: TGTTCCTGCAGGAGGAGGCAATTGATAGGAACTACG...TCTGGTGTGACCCTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGTGGGTTCCAAGTCCCCTGTCAAAATCTAATCCTGATCTCTCTGACCAGCGTAGTTCCTATCAATaGCCTCCTCCTGCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LRWVPSPLSKSNPDLSDQRSSYQ*PPPAGT Trigger: TGTTCCTGCAGGAGGAGGCAATTGATAGGAACTACG...CTGGTCAGAGAGATCAGGATTAGATTTTGACAGGGGACTTGGAACCCACCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS TCA 90 bp | TCAATTGCCTCCTCCTGCAGGAACATGTGTAGACAGCGTTCATTCTaGGCCAGTGGGTGCCCAGCAATTTTGTTAATAAACTGTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIASSCRNMCRQRSF*ASGCPAILLINCSR Trigger: CCTCGAACAGTTTATTAACAAAATTGCTGGGCACCCACTGGCTCAGAATGAACGCTGTCTACACATGTTCCTGCAGGAGGAGGCAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 ENSMUST00000156473.8 |
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| CDS-3UTR CAA 90 bp | GTCATGTCAAAACTGGACTTTGACAATAGGGTCTCTACTGATTTGTTCATACTTAGCGTCGGTCAGGTCTaGGGGCTTCGAGTTAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VMSKLDFDNRVSTDLFILSVGQV*GLRVKA Trigger: CGCCTTAACTCGAAGCCCCAAGACCTGACCGACGCT...AAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGACATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS-3UTR CAA 90 bp | ACACAGAAGAAATGGAGCCTCAGAGTCTCAGCACTTGTGCACAATGAAAGGAGAAAACTGTTCGAGGCCTaGCCTCCTTTCTTCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TQKKWSLRVSALVHNERRKLFEA*PPFFNE Trigger: TTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTTT...TCTCCTTTCATTGTGCACAAGTGCTGAGACTCTGAGGCTCCATTTCTTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 |
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| CDS-3UTR CAA 90 bp | ACAGCTCAAAAGTGCTTAGGAGAAATGAGAAAGTGGTGTGTGTGTGTGTGTGTGAAACTGTTCGAGGCCTaGCCTCCTTTCTTCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAQKCLGEMRKWCVCVCVKLFEA*PPFFNE Trigger: TTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTTT...CACACACACACACACACACCACTTTCTCATTTCTCCTAAGCACTTTTGAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120389.8 |
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| CDS-3UTR CAA 90 bp | GTCATGTCAAAACTGGACTTTGACAATAGGGTCTCTACTGATTTGTTCATACTTCGTAGTTCCTATCAATaGCCTCCTCCTGCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VMSKLDFDNRVSTDLFILRSSYQ*PPPAGT Trigger: TGTTCCTGCAGGAGGAGGCAATTGATAGGAACTACG...AAGTATGAACAAATCAGTAGAGACCCTATTGTCAAAGTCCAGTTTTGACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS CAA 90 bp | GCCAGTGTAATCCAAGGACCTTCCCAGGGACGTAGTTCCTATCAATaGCCTCCTCCTGCAGGAACATGTGTAGACAGCGTTCATTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASVIQGPSQGRSSYQ*PPPAGTCVDSVHSE Trigger: CTCAGAATGAACGCTGTCTACACATGTTCCTGCAGGAGGAGGCAATTGATAGGAACTACGTCCCTGGGAAGGTCCTTGGATTACACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156473.8 |
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| CDS CAA 90 bp | AATCCTTTTCCCCAAGGACCTTCCCAGGGACGTAGTTCCTATCAATaGCCTCCTCCTGCAGGAACATGTGTAGACAGCGTTCATTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NPFPQGPSQGRSSYQ*PPPAGTCVDSVHSE Trigger: CTCAGAATGAACGCTGTCTACACATGTTCCTGCAGGAGGAGGCAATTGATAGGAACTACGTCCCTGGGAAGGTCCTTGGGGAAAAGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077876.4 |
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| CDS TCA 72 bp | TCCTCCTGCAGGAACATGTGTAGACAGCGTTCATTCTaGGCCAGTGGGTGCCCAGCAATTTTGTTAATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSCRNMCRQRSF*ASGCPAILLIN Trigger: GTTTATTAACAAAATTGCTGGGCACCCACTGGCTCAGAATGAACGCTGTCTACACATGTTCCTGCAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 ENSMUST00000156473.8 |
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| CDS GCA 72 bp | TGCCCAGCAATTTTGTTAATAAACTGTTCGAGGCCTTaGCTCCTTTCTTCAATGAAAGACTCCTCAAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: CPAILLINCSRP*LLSSMKDSSKI Trigger: GATCTTTGAGGAGTCTTTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTTTATTAACAAAATTGCTGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 ENSMUST00000156473.8 |
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| CDS CAA 72 bp | GTGCCCAGCAATTTTGTTAATAAACTGTTCGAGGCCTaGCCTCCTTTCTTCAATGAAAGACTCCTCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VPSNFVNKLFEA*PPFFNERLLKD Trigger: ATCTTTGAGGAGTCTTTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTTTATTAACAAAATTGCTGGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077876.4 ENSMUST00000120389.8 ENSMUST00000156473.8 |
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