Pregenerated sensors for SNX11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020876Ensembl transcript IDs: ENSMUST00000021246.9, ENSMUST00000107661.10, ENSMUST00000127375.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAACACGATGGGCAGCCCGAGCCGCCTCTGCCAGAGCAACGCCTCTaGCCTGTTCCTTTCCCTCTGCCTGTGGCCGGCCCCTTTGCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: KHDGQPEPPLPEQRL*PVPFPLPVAGPFAR Trigger: CCTGGCAAAGGGGCCGGCCACAGGCAGAGGGAAAGGAACAGGTCAGAGGCGTTGCTCTGGCAGAGGCGGCTCGGGCTGCCCATCGTGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 90 bp | ATGCAGGCCAGGAGTCCCTCGGCTGGGGTGGACCCACAGCCGGGGTaGATGGCCAGGAGAGAAACACACACAAACCTAAGAGCAGCGCGG | + |
|
Preference number: 1 (lower is better) Translates to: MQARSPSAGVDPQPG*MARRETHTNLRAAR Trigger: CCGCGCTGCTCTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACCCCAGCCGAGGGACTCCTGGCCTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 90 bp | GCGGCTTCCCAGGAAAGCAGCAGTAGGCCCTGGCAGCCAGAGCCCTaGGGGCAAGGAGTTGTTATTACGAGAGGAAAGGCATCTACAAAG | + |
|
Preference number: 1 (lower is better) Translates to: AASQESSSRPWQPEP*GQGVVITRGKASTK Trigger: CTTTGTAGATGCCTTTCCTCTCGTAATAACAACTCCTTGCCCCCAGGGCTCTGGCTGCCAGGGCCTACTGCTGCTTTCCTGGGAAGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR TCA 90 bp | CCTGACCTGCCCTACACCTGCCTTGTCCCCAATCCCTCCTGTATGTaGCCTTGGGCTGCATCTTCTCCACCACACAGGAGAACAGAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PDLPYTCLVPNPSCM*PWAASSPPHRRTER Trigger: TCTCTCTGTTCTCCTGTGTGGTGGAGAAGATGCAGCCCAAGGTCACATACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCAGGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR TCA 90 bp | TGTCTGCAGATTTCAGTAGCAGGAGGCAGGAGCCGCCTCACCGTCTaGAGGAGAGCTTATGGCTCCTATCTCCATCTCCAGAGCCCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: CLQISVAGGRSRLTV*RRAYGSYLHLQSPH Trigger: GTGAGGGCTCTGGAGATGGAGATAGGAGCCATAAGCTCTCCTTCAGACGGTGAGGCGGCTCCTGCCTCCTGCTACTGAAATCTGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR GCA 90 bp | CTACACCTGCCTTGTCCCCAATCCCTCCTGTATGTGACCTTGGGCTaGATCTTCTCCACCACACAGGAGAACAGAGAGATCAGCCACTGC | + |
|
Preference number: 1 (lower is better) Translates to: LHLPCPQSLLYVTLG*IFSTTQENREISHC Trigger: GCAGTGGCTGATCTCTCTGTTCTCCTGTGTGGTGGAGAAGATGCAGCCCAAGGTCACATACAGGAGGGATTGGGGACAAGGCAGGTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR TCA 90 bp | AGTTTATTTCAGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTaGCAATCCCGCAATGCAGGCCAGGAGTCCCTCGGCTGGGGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: SLFQAKAPQLSTKCH*QSRNAGQESLGWGG Trigger: TCCACCCCAGCCGAGGGACTCCTGGCCTGCATTGCGGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTGAAATAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 90 bp | AAGGTTCATGCCCAGCTCTGTGAGAAGAGCCACATCCTAGCTCTCTaGAAAACCGTCCCTCCTGCGGTGGTGAACTTGAGTCTCACACAC | + |
|
Preference number: 1 (lower is better) Translates to: KVHAQLCEKSHILAL*KTVPPAVVNLSLTH Trigger: GTGTGTGAGACTCAAGTTCACCACCGCAGGAGGGACGGTTTTCCAGAGAGCTAGGATGTGGCTCTTCTCACAGAGCTGGGCATGAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR GCA 90 bp | GAAAACCGTCCCTCCTGCGGTGGTGAACTTGAGTCTCACACACAATaGAAGAGAGCTCCAGCGCACAGTTCTATGGCGTTATTTCCACGC | + |
|
Preference number: 1 (lower is better) Translates to: ENRPSCGGELESHTQ*KRAPAHSSMALFPR Trigger: GCGTGGAAATAACGCCATAGAACTGTGCGCTGGAGCTCTCTTGCATTGTGTGTGAGACTCAAGTTCACCACCGCAGGAGGGACGGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR TCA 90 bp | TACAGCGGACAGCCACAATCGCTGCATAACAAACCTGAGCAGATTTaGGTGGAAGATGTTCAACGGCCTGACCTGCCCTACACCTGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: YSGQPQSLHNKPEQI*VEDVQRPDLPYTCL Trigger: AAGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCACTCAAATCTGCTCAGGTTTGTTATGCAGCGATTGTGGCTGTCCGCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR GCA 90 bp | GGCGTTTACTCCCACAGAGGAGATACAGCGGACAGCCACAATCGCTaGATAACAAACCTGAGCAGATTTGAGTGGAAGATGTTCAACGGC | + |
|
Preference number: 1 (lower is better) Translates to: GVYSHRGDTADSHNR*ITNLSRFEWKMFNG Trigger: GCCGTTGAACATCTTCCACTCAAATCTGCTCAGGTTTGTTATGCAGCGATTGTGGCTGTCCGCTGTATCTCCTCTGTGGGAGTAAACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | AACCTAAGAGCAGCGCGGCAGCACCAAGGTGGGCCCGGCACCCAGCCTGCCCAGGCCTGTGTGCCCCACTaGCTGAACTTGCGGCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NLRAARQHQGGPGTQPAQACVPH*LNLRLP Trigger: GGGAAGCCGCAAGTTCAGTCAGTGGGGCACACAGGC...CTGGGCAGGCTGGGTGCCGGGCCCACCTTGGTGCTGCCGCGCTGCTCTTAGGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CCA 90 bp | AACCTAAGAGCAGCGCGGCAGCACCAAGGTGGGCCCGGCACCCAGCCTGCCCAGAGCCTGGCAAGGTCTTaGAAGAGGCTGGAAACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: NLRAARQHQGGPGTQPAQSLARS*KRLETS Trigger: TGAGGTTTCCAGCCTCTTCCAAGACCTTGCCAGGCT...CTGGGCAGGCTGGGTGCCGGGCCCACCTTGGTGCTGCCGCGCTGCTCTTAGGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAGGAGAGCTTATGGCTCCTATCTCCATCTCCAGAGCCCTCACTTCCAGGAGCAGCAGTAGGCCCTaGCAGCCAGAGCCCTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SEGELMAPISISRALTSRSSSRP*QPEPWG Trigger: CCCCCAGGGCTCTGGCTGCCAGGGCCTACTGCTGCT...CCTGGAAGTGAGGGCTCTGGAGATGGAGATAGGAGCCATAAGCTCTCCTTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CAA 90 bp | CCTGCCCTACACCTGCCTTGTCCCCAATCCCTCCTGTATGTGACCTaGGGCTGCATCTTCTCCACCACACAGGAGAACAGAGAGATCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PALHLPCPQSLLYVT*GCIFSTTQENREIS Trigger: GCTGATCTCTCTGTTCTCCTGTGTGGTGGAGAAGATGCAGCCCAAGGTCACATACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CAA 90 bp | AAAGCAGCAGTAGGCCCTGGCAGCCAGAGCCCTGGGGGCAAGGAGTaGTTATTACGAGAGGAAAGGCATCTACAAAGAAGGGAGCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: KAAVGPGSQSPGGKE*LLREERHLQRREPT Trigger: GGTGGGCTCCCTTCTTTGTAGATGCCTTTCCTCTCGTAATAACAACTCCTTGCCCCCAGGGCTCTGGCTGCCAGGGCCTACTGCTGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | ACGATGGGCAGCCCGAGCCGCCTCTGCCAGAGCAACGCCTCTGACCTGTTCCTTAAACCTGAGCAGATTTaGGTGGAAGATGTTCAACGG | + |
|
Preference number: 2 (lower is better) Translates to: TMGSPSRLCQSNASDLFLKPEQI*VEDVQR Trigger: CCGTTGAACATCTTCCACTCAAATCTGCTCAGGTTT...AAGGAACAGGTCAGAGGCGTTGCTCTGGCAGAGGCGGCTCGGGCTGCCCATCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCTTGGGCTGCAGCAAAACCTaGAGCCTGCCAAGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: EALSACKLSGPTQPGKVLGCSKT*SLPRRK Trigger: CTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCC...CAAGACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCTAAGGAAGCTTTAAGTGCCTaGAAGCTCTCAGGCCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: GGPTAGVDGQERNTHKPKEALSA*KLSGPT Trigger: AGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTC...CTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | AACCGTCCCTCCTGCGGTGGTGAACTTGAGTCTCACACACAATGCAAGAGAGCTAGATGTTCAACGGCCTaGCCTGCCCTACACCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: NRPSCGGELESHTQCKRARCSTA*PALHLP Trigger: AGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCT...AGCTCTCTTGCATTGTGTGTGAGACTCAAGTTCACCACCGCAGGAGGGACGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCTTGTTCTGGGCCCTGTGCTaGACTCACAAACACAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EALSACKLSGPTQPGKVLFWALC*THKHSV Trigger: CACACTGTGTTTGTGAGTTCAGCACAGGGCCCAGAA...CAAGACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCTAAGTATGTGACCTTGGGCTaGATCTTCTCCACCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: GGPTAGVDGQERNTHKPKYVTLG*IFSTTQ Trigger: CTGTGTGGTGGAGAAGATGCAGCCCAAGGTCACATA...CTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCTATGTGACCTTGGGCTaGATCTTCTCCACCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: QEALSACKLSGPTQPGKVYVTLG*IFSTTQ Trigger: CTGTGTGGTGGAGAAGATGCAGCCCAAGGTCACATA...GACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTGAAACAAAGCCTGTGTGCCCCACTGACTGAACTTGCGGCTTCCCAGGAACCAGGAAGCTTTAAGTaGCTGCAAGCTCTCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RLKQSLCAPLTELAASQEPGSFK*LQALRP Trigger: GGGCCTGAGAGCTTGCAGGCACTTAAAGCTTCCTGG...TTCCTGGGAAGCCGCAAGTTCAGTCAGTGGGGCACACAGGCTTTGTTTCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CAA 90 bp | TTTGAGTGGAAGATGTTCAACGGCCTGACCTGCCCTACACCTGCCTaGTCCCCAATCCCTCCTGTATGTGACCTTGGGCTGCATCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FEWKMFNGLTCPTPA*SPIPPVCDLGLHLL Trigger: GAGAAGATGCAGCCCAAGGTCACATACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCACTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCGCAATGCAGCCCTCACTTCCAGGCTaGAACAAAGCCTGTGTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RPKPLNSQLNATDNPAMQPSLPG*NKACVP Trigger: GGGCACACAGGCTTTGTTTCAGCCTGGAAGTGAGGG...CTGCATTGCGGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CCA 90 bp | CGTCCCTCCTGCGGTGGTGAACTTGAGTCTCACACACAATGCAAGAGAGCTCCACCACAACCAAAATGTTaGCTCCAGGGGCTGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RPSCGGELESHTQCKRAPPQPKC*LQGLQQ Trigger: TTGCTGCAGCCCCTGGAGCCAACATTTTGGTTGTGG...TGGAGCTCTCTTGCATTGTGTGTGAGACTCAAGTTCACCACCGCAGGAGGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGAAACAAAGCCTGTGTGCCCCACTGACTGAACTTGCGGCTTCCCAGGAACTCACAAACACAGTGTaGCGTTTACTCCCACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLKQSLCAPLTELAASQELTNTV*RLLPQR Trigger: CCTCTGTGGGAGTAAACGCCACACTGTGTTTGTGAG...TTCCTGGGAAGCCGCAAGTTCAGTCAGTGGGGCACACAGGCTTTGTTTCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTGGCTCCAGGGGCTGCAGCAAAACCTGAAGCCTGCCAAGAAGGAAGGAGAAGGCAGCTAAAACTCTaGCAAGAAGGGTTCCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: MLAPGAAAKPEACQEGRRRQLKL*QEGFPK Trigger: TTTGGGGAACCCTTCTTGGCAGAGTTTTAGCTGCCT...TCTCCTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCCCCTGGAGCCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR GCA 90 bp | TTAGCACCTGGCACCTCAGACAGGCTTCGAAGACGGAAGCAGCATCAGGTAAATCACTCCCTCCTACCCTaGTACAGCTTGTTAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: LAPGTSDRLRRRKQHQVNHSLLP*YSLLDT Trigger: TGTGTCTAACAAGCTGTAGCAGGGTAGGAGGGAGTG...ATTTACCTGATGCTGCTTCCGTCTTCGAAGCCTGTCTGAGGTGCCAGGTGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCGCAATGCAGCTCACAAACACAGTGTaGCGTTTACTCCCACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RPKPLNSQLNATDNPAMQLTNTV*RLLPQR Trigger: CCTCTGTGGGAGTAAACGCCACACTGTGTTTGTGAG...CTGCATTGCGGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGAAACAAAGCCTGTGTGCCCCACTGACTGAACTTGCGGCTTCCCAGGAAGGTCTTGGAAGAGGCTaGAAACCTCAACAAATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RLKQSLCAPLTELAASQEGLGRG*KPQQIV Trigger: GACTATTTGTTGAGGTTTCCAGCCTCTTCCAAGACC...TTCCTGGGAAGCCGCAAGTTCAGTCAGTGGGGCACACAGGCTTTGTTTCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CCA 90 bp | GTTTATTTCAGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCCACAGCCGGGGTGGATaGCCAGGAGAGAAACACACA | + |
|
Preference number: 2 (lower is better) Translates to: VYFRPKPLNSQLNATDNPHSRGG*PGEKHT Trigger: TGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTG...GGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTGAAATAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | GTTTATTTCAGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCGGCTGCAGCAAAACCTaGAGCCTGCCAAGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VYFRPKPLNSQLNATDNPGCSKT*SLPRRK Trigger: CTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCC...GGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTGAAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | TTACTGAAAGGCAAGGAGGTGAGGAATACGTCTTCACCACTCTGTCCACACAAGAATCCCTCCTGTATGTaGCCTTGGGCTGCATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LLKGKEVRNTSSPLCPHKNPSCM*PWAASS Trigger: AGAAGATGCAGCCCAAGGTCACATACAGGAGGGATT...CTTGTGTGGACAGAGTGGTGAAGACGTATTCCTCACCTCCTTGCCTTTCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTCACACACAATGCAAGAGAGCTCCAGCGCACAGTTCTATGGCGTTATTTCCAAAACCTGAGCAGATTTaGGTGGAAGATGTTCAACGG | + |
|
Preference number: 2 (lower is better) Translates to: SHTQCKRAPAHSSMALFPKPEQI*VEDVQR Trigger: CCGTTGAACATCTTCCACTCAAATCTGCTCAGGTTT...TGGAAATAACGCCATAGAACTGTGCGCTGGAGCTCTCTTGCATTGTGTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR CCA 72 bp | AAGAAGGGAGCCCACCTCAACCCCGCAGAAACACGATaGGCAGCCCGAGCCGCCTCTGCCAGAGCAACGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KKGAHLNPAETR*AARAASARATP Trigger: AGGCGTTGCTCTGGCAGAGGCGGCTCGGGCTGCCCATCGTGTTTCTGCGGGGTTGAGGTGGGCTCCCTTCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CAA 90 bp | ACGATGGGCAGCCCGAGCCGCCTCTGCCAGAGCAACGCCTCTGACCTGTTCCTTCAGCCTGGCAAGGTCTaGGAAGAGGCTGGAAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TMGSPSRLCQSNASDLFLQPGKV*EEAGNL Trigger: GAGGTTTCCAGCCTCTTCCAAGACCTTGCCAGGCTG...AAGGAACAGGTCAGAGGCGTTGCTCTGGCAGAGGCGGCTCGGGCTGCCCATCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGTGGACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCTGCCCTACACCTGCCTaGTCCCCAATCCCTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LGWTHSRGGWPGEKHTQTCPTPA*SPIPPV Trigger: TACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCA...GGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 72 bp | AGGAGTCCCTCGGCTGGGGTGGACCCACAGCCGGGGTaGATGGCCAGGAGAGAAACACACACAAACCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSPSAGVDPQPG*MARRETHTNLR Trigger: TCTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACCCCAGCCGAGGGACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR GCA 72 bp | TGCCAGAGCAACGCCTCTGACCTGTTCCTTTCCCTCTaGCTGTGGCCGGCCCCTTTGCCAGGAAGCTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CQSNASDLFLSL*LWPAPLPGSFK Trigger: CTTAAAGCTTCCTGGCAAAGGGGCCGGCCACAGGCAGAGGGAAAGGAACAGGTCAGAGGCGTTGCTCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR TCA 72 bp | CAGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTaGCAATCCCGCAATGCAGGCCAGGAGTCCCTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: QAKAPQLSTKCH*QSRNAGQESLG Trigger: GCCGAGGGACTCCTGGCCTGCATTGCGGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 72 bp | CAGGAAAGCAGCAGTAGGCCCTGGCAGCCAGAGCCCTaGGGGCAAGGAGTTGTTATTACGAGAGGAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QESSSRPWQPEP*GQGVVITRGKA Trigger: TGCCTTTCCTCTCGTAATAACAACTCCTTGCCCCCAGGGCTCTGGCTGCCAGGGCCTACTGCTGCTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGGCTCCAGGGGCTGCAGCAAAACCTGAAGCCTGCCAAGAAGGAAGGAGACTCCTGTATGTGACCTaGGGCTGCATCTTCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: MLAPGAAAKPEACQEGRRLLYVT*GCIFST Trigger: GGTGGAGAAGATGCAGCCCAAGGTCACATACAGGAG...TCTCCTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCCCCTGGAGCCAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CAA 90 bp | GACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCTAAGAGCACCTGGGGGCAAGGAGTaGTTATTACGAGAGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DPQPGWMARRETHTNLRAPGGKE*LLREER Trigger: CCTTTCCTCTCGTAATAACAACTCCTTGCCCCCAGG...TGCTCTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCGCAATGCAGTGCCCTACACCTGCCTaGTCCCCAATCCCTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RPKPLNSQLNATDNPAMQCPTPA*SPIPPV Trigger: TACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCA...CTGCATTGCGGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR GCA 72 bp | AGCAGATTTGAGTGGAAGATGTTCAACGGCCTGACCTaGCCTACACCTGCCTTGTCCCCAATCCCTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SRFEWKMFNGLT*PTPALSPIPPV Trigger: TACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCACTCAAATCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR GCA 72 bp | CCCTCCTGCGGTGGTGAACTTGAGTCTCACACACAATaGAAGAGAGCTCCAGCGCACAGTTCTATGGCGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PSCGGELESHTQ*KRAPAHSSMAL Trigger: TAACGCCATAGAACTGTGCGCTGGAGCTCTCTTGCATTGTGTGTGAGACTCAAGTTCACCACCGCAGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR GCA 72 bp | GAGCCACATCCTAGCTCTCTGGAAAACCGTCCCTCCTaGGGTGGTGAACTTGAGTCTCACACACAATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EPHPSSLENRPS*GGELESHTQCK Trigger: CTTGCATTGTGTGTGAGACTCAAGTTCACCACCGCAGGAGGGACGGTTTTCCAGAGAGCTAGGATGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR CCA 72 bp | GCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCTTaGAAGAGGCTGGAAACCTCAACAAATAGTCACATC | + |
|
Preference number: 3 (lower is better) Translates to: ASSQAPLSLARS*KRLETSTNSHI Trigger: GATGTGACTATTTGTTGAGGTTTCCAGCCTCTTCCAAGACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGAGTCTCACACACAATGCAAGAGAGCTCCAGCGCACAGTTCTATGGCGTCTCCTGTATGTGACCTaGGGCTGCATCTTCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: NLSLTHNARELQRTVLWRLLYVT*GCIFST Trigger: GGTGGAGAAGATGCAGCCCAAGGTCACATACAGGAG...ACGCCATAGAACTGTGCGCTGGAGCTCTCTTGCATTGTGTGTGAGACTCAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR TCA 72 bp | CAGCCACAATCGCTGCATAACAAACCTGAGCAGATTTaGGTGGAAGATGTTCAACGGCCTGACCTGCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QPQSLHNKPEQI*VEDVQRPDLPY Trigger: GTAGGGCAGGTCAGGCCGTTGAACATCTTCCACTCAAATCTGCTCAGGTTTGTTATGCAGCGATTGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR GCA 72 bp | ATGTTGGCTCCAGGGGCTGCAGCAAAACCTGAAGCCTaGCAAGAAGGAAGGAGAACGATAGGAACTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MLAPGAAAKPEA*QEGRRTIGTFC Trigger: ACAGAAAGTTCCTATCGTTCTCCTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCCCCTGGAGCCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR GCA 72 bp | TCCCACAGAGGAGATACAGCGGACAGCCACAATCGCTaGATAACAAACCTGAGCAGATTTGAGTGGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SHRGDTADSHNR*ITNLSRFEWKM Trigger: CATCTTCCACTCAAATCTGCTCAGGTTTGTTATGCAGCGATTGTGGCTGTCCGCTGTATCTCCTCTGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 72 bp | CACAATCGCTGCATAACAAACCTGAGCAGATTTGAGTaGAAGATGTTCAACGGCCTGACCTGCCCTACACCT | + |
|
Preference number: 3 (lower is better) Translates to: HNRCITNLSRFE*KMFNGLTCPTP Trigger: AGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCACTCAAATCTGCTCAGGTTTGTTATGCAGCGATTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR TCA 72 bp | ACTCTGCCAAGAAGGGTTCCCCAAACCATTCACCTGTaGCAGCCCTCTTTAAACAAACACCTGAAGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: TLPRRVPQTIHL*QPSLNKHLKKP Trigger: GGGTTTCTTCAGGTGTTTGTTTAAAGAGGGCTGTCACAGGTGAATGGTTTGGGGAACCCTTCTTGGCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 72 bp | GGAAGAGGCTGGAAACCTCAACAAATAGTCACATCGTaGCCATTTACTGAAAGGCAAGGAGGTGAGGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: GRGWKPQQIVTS*PFTERQGGEEY Trigger: GTATTCCTCACCTCCTTGCCTTTCAGTAAATGGCCACGATGTGACTATTTGTTGAGGTTTCCAGCCTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CCA 72 bp | ACACACAATGCAAGAGAGCTCCAGCGCACAGTTCTATaGCGTTATTTCCACGCTGATAAATTCATGATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: THNARELQRTVL*RYFHADKFMIY Trigger: ATAAATCATGAATTTATCAGCGTGGAAATAACGCCATAGAACTGTGCGCTGGAGCTCTCTTGCATTGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| CDS-3UTR TCA 90 bp | AACCTAAGAGCAGCGCGGCAGCACCAAGGTGGGCCCGGCACCCAGCCTGCCCAGTGCACCCTGGGGTCCTaGACTCGAACTGTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLRAARQHQGGPGTQPAQCTLGS*TRTVIT Trigger: GGTGATCACAGTTCGAGTTCAGGACCCCAGGGTGCA...CTGGGCAGGCTGGGTGCCGGGCCCACCTTGGTGCTGCCGCGCTGCTCTTAGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | CCACTGACAATCCCGCAATGCAGGCCAGGAGTCCCTCGGCTGGGGTGGACCCACATGGCGCCCCGGCCCTaGACACAGGCTTCAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLTIPQCRPGVPRLGWTHMAPRP*TQASIS Trigger: CGAGATTGAAGCCTGTGTCCAGGGCCGGGGCGCCAT...GTGGGTCCACCCCAGCCGAGGGACTCCTGGCCTGCATTGCGGGATTGTCAGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | ACGATGGGCAGCCCGAGCCGCCTCTGCCAGAGCAACGCCTCTGACCTGTTCCTTTCGGGCACCGAGAGCTaGCTTTGGAGGAAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TMGSPSRLCQSNASDLFLSGTES*LWRKRC Trigger: GCATCTCTTCCTCCAAAGCCAGCTCTCGGTGCCCGA...AAGGAACAGGTCAGAGGCGTTGCTCTGGCAGAGGCGGCTCGGGCTGCCCATCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCCAGCGTGGGGCTTTCTaGGGATGGGCCCTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEALSACKLSGPTQPGKVQRGAF*GWALRV Trigger: GACTCTGAGGGCCCATCCTCAGAAAGCCCCACGCTG...GACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCTAAGCAGCGTGGGGCTTTCTaGGGATGGGCCCTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGPTAGVDGQERNTHKPKQRGAF*GWALRV Trigger: GACTCTGAGGGCCCATCCTCAGAAAGCCCCACGCTG...CTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | GAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCTTGAGCTGGGCAGCAGCGTaGGGCTTTCTGAGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EALSACKLSGPTQPGKVLSWAAA*GFLRMG Trigger: GCCCATCCTCAGAAAGCCCCACGCTGCTGCCCAGCT...CAAGACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | TGCCCTACACCTGCCTTGTCCCCAATCCCTCCTGTATGTGACCTTGGGCTGCATCAGGCAAGGAGGAGCTaGGCAGCAGCGTGGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPTPALSPIPPVCDLGLHQARRS*AAAWGF Trigger: AAAGCCCCACGCTGCTGCCCAGCTCCTCCTTGCCTG...ATGCAGCCCAAGGTCACATACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | GACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCTAAGAGCACAGGCAAGGAGGAGCTaGGCAGCAGCGTGGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DPQPGWMARRETHTNLRAQARRS*AAAWGF Trigger: AAAGCCCCACGCTGCTGCCCAGCTCCTCCTTGCCTG...TGCTCTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTGGACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCCTTCATTCTGCACCCTaGGGTCCTGAACTCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGWTHSRGGWPGEKHTQTLHSAP*GPELEL Trigger: CAGTTCGAGTTCAGGACCCCAGGGTGCAGAATGAAG...GGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGACCCACAGCCGGGGTGGATGGCCAGGAGAGAAACACACACAAACCTAAGGACGTCGCTTCTCAATaGACTCATCGGAGCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGPTAGVDGQERNTHKPKDVASQ*THRSRQ Trigger: TTGGCGGCTCCGATGAGTTCATTGAGAAGCGACGTC...CTTAGGTTTGTGTGTGTTTCTCTCCTGGCCATCCACCCCGGCTGTGGGTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | TGCCCTACACCTGCCTTGTCCCCAATCCCTCCTGTATGTGACCTTGGGCTGCATGGAGCTCCTGCGCCCTaGTCTTGGAAGAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPTPALSPIPPVCDLGLHGAPAP*SWKKAA Trigger: TGCTGCTTTCTTCCAAGATCAGGGCGCAGGAGCTCC...ATGCAGCCCAAGGTCACATACAGGAGGGATTGGGGACAAGGCAGGTGTAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCCGCCTCACCGTCTGAAGGAGAGCTTATGGCTCCTATCTCCATCTCCAGAGCGTTCCTCTGCAGCTaGTTCCTCAGCCACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAASPSEGELMAPISISRAFLCS*FLSHTN Trigger: GTTTGTGTGGCTGAGGAAGCAGCTGCAGAGGAACGC...TCTGGAGATGGAGATAGGAGCCATAAGCTCTCCTTCAGACGGTGAGGCGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR GCA 90 bp | TGGAAGATGTTCAACGGCCTGACCTGCCCTACACCTGCCTTGTCCCCAATCCCTGCCCACGTCTCTAACTaGTCCTTCTCCTCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKMFNGLTCPTPALSPIPAHVSN*SFSSLR Trigger: TCTCAGTGAGGAGAAGGAGCAGTTAGAGACGTGGGC...AGGGATTGGGGACAAGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | AACCGTCCCTCCTGCGGTGGTGAACTTGAGTCTCACACACAATGCAAGAGAGCTTCGGGCACCGAGAGCTaGCTTTGGAGGAAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NRPSCGGELESHTQCKRASGTES*LWRKRC Trigger: GCATCTCTTCCTCCAAAGCCAGCTCTCGGTGCCCGA...AGCTCTCTTGCATTGTGTGTGAGACTCAAGTTCACCACCGCAGGAGGGACGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR CAA 72 bp | CACCTGCCTTGTCCCCAATCCCTCCTGTATGTGACCTaGGGCTGCATCTTCTCCACCACACAGGAGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLPCPQSLLYVT*GCIFSTTQENR Trigger: TCTGTTCTCCTGTGTGGTGGAGAAGATGCAGCCCAAGGTCACATACAGGAGGGATTGGGGACAAGGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| 3UTR CAA 72 bp | GTAGGCCCTGGCAGCCAGAGCCCTGGGGGCAAGGAGTaGTTATTACGAGAGGAAAGGCATCTACAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPGSQSPGGKE*LLREERHLQRR Trigger: CCTTCTTTGTAGATGCCTTTCCTCTCGTAATAACAACTCCTTGCCCCCAGGGCTCTGGCTGCCAGGGCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCAGGAAGAGATGCAACTaGCTGTCTGACAGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: QEALSACKLSGPTQPGKVRKRCN*LSDRRT Trigger: GGTTCTTCTGTCAGACAGTCAGTTGCATCTCTTCCT...GACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGCTCCAGGGGCTGCAGCAAAACCTGAAGCCTGCCAAGAAGGAAGGAGAGCCCACGTCTCTAACTaGTCCTTCTCCTCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MLAPGAAAKPEACQEGRRAHVSN*SFSSLR Trigger: TCTCAGTGAGGAGAAGGAGCAGTTAGAGACGTGGGC...TCTCCTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCCCCTGGAGCCAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCTCCAGGGGCTGCAGCAAAACCTGAAGCCTGCCAAGAAGGAAGGAGACTTCATTCTGCACCCTaGGGTCCTGAACTCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: MLAPGAAAKPEACQEGRRLHSAP*GPELEL Trigger: CAGTTCGAGTTCAGGACCCCAGGGTGCAGAATGAAG...TCTCCTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCCCCTGGAGCCAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | TGGAAGATGTTCAACGGCCTGACCTGCCCTACACCTGCCTTGTCCCCAATCCCTCAGCAACTGTTGAGCTaGTCTCCTTTAGCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKMFNGLTCPTPALSPIPQQLLS*SPLAKW Trigger: CCACTTGGCTAAAGGAGACCAGCTCAACAGTTGCTG...AGGGATTGGGGACAAGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCAAGAAGGGTTCCCCAAACCATTCACCTGTGACAGCCCTCTTTAAACAAAGCTGGGCAGCAGCGTaGGGCTTTCTGAGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAKKGSPNHSPVTALFKQSWAAA*GFLRMG Trigger: GCCCATCCTCAGAAAGCCCCACGCTGCTGCCCAGCT...TTGTTTAAAGAGGGCTGTCACAGGTGAATGGTTTGGGGAACCCTTCTTGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | TGGAAGATGTTCAACGGCCTGACCTGCCCTACACCTGCCTTGTCCCCAATCCCTAAATGCTGGAGACCTTaGCGTCGCTTCTCAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WKMFNGLTCPTPALSPIPKCWRP*RRFSMN Trigger: GTTCATTGAGAAGCGACGTCAAGGTCTCCAGCATTT...AGGGATTGGGGACAAGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAAGGCAAGGAGGTGAGGAATACGTCTTCACCACTCTGTCCACACAAGTGCACCCTGGGGTCCTaGACTCGAACTGTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLKGKEVRNTSSPLCPHKCTLGS*TRTVIT Trigger: GGTGATCACAGTTCGAGTTCAGGACCCCAGGGTGCA...CTTGTGTGGACAGAGTGGTGAAGACGTATTCCTCACCTCCTTGCCTTTCAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGCTCCAGGGGCTGCAGCAAAACCTGAAGCCTGCCAAGAAGGAAGGAGAAGGAAGAGATGCAACTaGCTGTCTGACAGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: MLAPGAAAKPEACQEGRRRKRCN*LSDRRT Trigger: GGTTCTTCTGTCAGACAGTCAGTTGCATCTCTTCCT...TCTCCTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCCCCTGGAGCCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | TCTGCCAAGAAGGGTTCCCCAAACCATTCACCTGTGACAGCCCTCTTTAAACAAGGAGCTCCTGCGCCCTaGTCTTGGAAGAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAKKGSPNHSPVTALFKQGAPAP*SWKKAA Trigger: TGCTGCTTTCTTCCAAGATCAGGGCGCAGGAGCTCC...TTGTTTAAAGAGGGCTGTCACAGGTGAATGGTTTGGGGAACCCTTCTTGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAAGGCAAGGAGGTGAGGAATACGTCTTCACCACTCTGTCCACACAAGGACGTCGCTTCTCAATaGACTCATCGGAGCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLKGKEVRNTSSPLCPHKDVASQ*THRSRQ Trigger: TTGGCGGCTCCGATGAGTTCATTGAGAAGCGACGTC...CTTGTGTGGACAGAGTGGTGAAGACGTATTCCTCACCTCCTTGCCTTTCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAAGGCAAGGAGGTGAGGAATACGTCTTCACCACTCTGTCCACACAAGAGCCGCCAAAGAAAGTaGACTTCCCAGGAAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLKGKEVRNTSSPLCPHKSRQRK*TSQEAP Trigger: CGGAGCTTCCTGGGAAGTCCACTTTCTTTGGCGGCT...CTTGTGTGGACAGAGTGGTGAAGACGTATTCCTCACCTCCTTGCCTTTCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR GCA 90 bp | GTTTATTTCAGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCGCGTTCCTCTGCAGCTaGTTCCTCAGCCACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VYFRPKPLNSQLNATDNPAFLCS*FLSHTN Trigger: GTTTGTGTGGCTGAGGAAGCAGCTGCAGAGGAACGC...GGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTGAAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATTTCAGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCTCTCCTTTAGCCAAGTaGGAGGTGCTCTGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYFRPKPLNSQLNATDNPSPLAK*EVLCLS Trigger: GGAGAGGCAGAGCACCTCCCACTTGGCTAAAGGAGA...GGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTGAAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CCA 90 bp | AACTTGAGTCTCACACACAATGCAAGAGAGCTCCAGCGCACAGTTCTATGGCGTCAGCAACTGTTGAGCTaGTCTCCTTTAGCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSLTHNARELQRTVLWRQQLLS*SPLAKW Trigger: CCACTTGGCTAAAGGAGACCAGCTCAACAGTTGCTG...ACGCCATAGAACTGTGCGCTGGAGCTCTCTTGCATTGTGTGTGAGACTCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| CDS-3UTR CCA 90 bp | TGCTACAGCTTGTTAGACACAAATTGCAACAACAGTCTTAAATACTTGCAGTTTTCTCCTTTAGCCAAGTaGGAGGTGCTCTGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYSLLDTNCNNSLKYLQFSPLAK*EVLCLS Trigger: GGAGAGGCAGAGCACCTCCCACTTGGCTAAAGGAGA...AAACTGCAAGTATTTAAGACTGTTGTTGCAATTTGTGTCTAACAAGCTGTAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| 3UTR CAA 72 bp | TTGTTAGACACAAATTGCAACAACAGTCTTAAATACTaGCAGTTTATTTCAGGCCAAAGCCCCTCAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLDTNCNNSLKY*QFISGQSPSTL Trigger: GAGAGTTGAGGGGCTTTGGCCTGAAATAAACTGCAAGTATTTAAGACTGTTGTTGCAATTTGTGTCTAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021246.9 |
||
| CDS CCA 90 bp | TCCATCGGCCCAGCCTGGTCCGCTGCCACGGCCCTTCTCGCAGGCTaGGACACAGAGAGTCCCTCCTCCGGTCTTGCAGGATCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIGPAWSAATALLAG*DTESPSSGLAGSQQ Trigger: CTGCTGGGATCCTGCAAGACCGGAGGAGGGACTCTCTGTGTCCCAGCCTGCGAGAAGGGCCGTGGCAGCGGACCAGGCTGGGCCGATGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | CCACTGACAATCCCGCAATGCAGGCCAGGAGTCCCTCGGCTGGGGTGGACCCACGTCCCTCCTCCGGTCTaGCAGGATCCCAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLTIPQCRPGVPRLGWTHVPPPV*QDPSRQ Trigger: CTGCCTGCTGGGATCCTGCAAGACCGGAGGAGGGAC...GTGGGTCCACCCCAGCCGAGGGACTCCTGGCCTGCATTGCGGGATTGTCAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS CCA 90 bp | CCTCCTCCGGTCTTGCAGGATCCCAGCAGGCAGGCAAGGAGGAGCTaGGCAGCAGCGTGGGGCTTTCTGAGGATGGGCCCTCAGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPPVLQDPSRQARRS*AAAWGFLRMGPQSP Trigger: TGGACTCTGAGGGCCCATCCTCAGAAAGCCCCACGCTGCTGCCCAGCTCCTCCTTGCCTGCCTGCTGGGATCCTGCAAGACCGGAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS GCA 90 bp | GAGGATGGGCCCTCAGAGTCCATCACTGGAGCCCACGTCTCTAACTaGTCCTTCTCCTCACTGAGAGGCGGCGAAGGGGAGCTCCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EDGPSESITGAHVSN*SFSSLRGGEGELLR Trigger: GCGCAGGAGCTCCCCTTCGCCGCCTCTCAGTGAGGAGAAGGAGCAGTTAGAGACGTGGGCTCCAGTGATGGACTCTGAGGGCCCATCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGCTCCAGGGGCTGCAGCAAAACCTGAAGCCTGCCAAGAAGGAAGGAGAGTCCCTCCTCCGGTCTaGCAGGATCCCAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLAPGAAAKPEACQEGRRVPPPV*QDPSRQ Trigger: CTGCCTGCTGGGATCCTGCAAGACCGGAGGAGGGAC...TCTCCTTCCTTCTTGGCAGGCTTCAGGTTTTGCTGCAGCCCCTGGAGCCAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS TCA 90 bp | CTCCTTCTCCTCACTGAGAGGCGGCGAAGGGGAGCTCCTGCGCCCTaGTCTTGGAAGAAAGCAGCAACTGTTGAGCTGGTCTCCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLTERRRRGAPAP*SWKKAATVELVSFS Trigger: GCTAAAGGAGACCAGCTCAACAGTTGCTGCTTTCTTCCAAGATCAGGGCGCAGGAGCTCCCCTTCGCCGCCTCTCAGTGAGGAGAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | TGGAAGATGTTCAACGGCCTGACCTGCCCTACACCTGCCTTGTCCCCAATCCCTCGCACACAGGACGTCTaGGCGGTAAAAGCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WKMFNGLTCPTPALSPIPRTQDV*AVKALL Trigger: CAGCAAGGCTTTTACCGCCAAGACGTCCTGTGTGCG...AGGGATTGGGGACAAGGCAGGTGTAGGGCAGGTCAGGCCGTTGAACATCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGGCCCTGGCAGCCAGAGCCCTGGGGGCAAGGAGTTGTTATTACGAGAGCACCTCCTCCAGGTCTaGGTTCTCCAACATCCTATA | + |
|
Preference number: 5 (lower is better) Translates to: AVGPGSQSPGGKELLLREHLLQV*VLQHPI Trigger: TATAGGATGTTGGAGAACCAAGACCTGGAGGAGGTG...CTCTCGTAATAACAACTCCTTGCCCCCAGGGCTCTGGCTGCCAGGGCCTACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCTTGGCGGTAAAAGCCTaGCTGTTCGTATGGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QEALSACKLSGPTQPGKVLAVKA*LFVWRN Trigger: ATTCCTCCATACGAACAGCAAGGCTTTTACCGCCAA...GACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | GAAGCTTTAAGTGCCTGCAAGCTCTCAGGCCCCACTCAGCCTGGCAAGGTCTTGAGAAAGCAGCAACTGTaGAGCTGGTCTCCTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EALSACKLSGPTQPGKVLRKQQL*SWSPLA Trigger: GGCTAAAGGAGACCAGCTCAACAGTTGCTGCTTTCT...CAAGACCTTGCCAGGCTGAGTGGGGCCTGAGAGCTTGCAGGCACTTAAAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | AGGCTGAAACAAAGCCTGTGTGCCCCACTGACTGAACTTGCGGCTTCCCAGGAAAGAAAGCAGCAACTGTaGAGCTGGTCTCCTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLKQSLCAPLTELAASQERKQQL*SWSPLA Trigger: GGCTAAAGGAGACCAGCTCAACAGTTGCTGCTTTCT...TTCCTGGGAAGCCGCAAGTTCAGTCAGTGGGGCACACAGGCTTTGTTTCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS TCA 90 bp | TCAATCTCGGGCACCGAGAGCTGGCTTTGGAGGAAGAGATGCAACTaGCTGTCTGACAGAAGAACCACGCTCTGTAGGACCTTTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SISGTESWLWRKRCN*LSDRRTTLCRTFSR Trigger: CCTTGAAAAGGTCCTACAGAGCGTGGTTCTTCTGTCAGACAGTCAGTTGCATCTCTTCCTCCAAAGCCAGCTCTCGGTGCCCGAGATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 ENSMUST00000127375.2 |
||
| CDS TCA 90 bp | GGACCTTTTCAAGGAAATGCTGGAGACCTTGACGTCGCTTCTCAATaGACTCATCGGAGCCGCCAAAGAAAGTGGACTTCCCAGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPFQGNAGDLDVASQ*THRSRQRKWTSQEA Trigger: AGCTTCCTGGGAAGTCCACTTTCTTTGGCGGCTCCGATGAGTTCATTGAGAAGCGACGTCAAGGTCTCCAGCATTTCCTTGAAAAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 ENSMUST00000127375.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCCAAGAAGGGTTCCCCAAACCATTCACCTGTGACAGCCCTCTTTAAACAACACCTCCTCCAGGTCTaGGTTCTCCAACATCCTATA | + |
|
Preference number: 5 (lower is better) Translates to: SAKKGSPNHSPVTALFKQHLLQV*VLQHPI Trigger: TATAGGATGTTGGAGAACCAAGACCTGGAGGAGGTG...TTGTTTAAAGAGGGCTGTCACAGGTGAATGGTTTGGGGAACCCTTCTTGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | GTTTATTTCAGGCCAAAGCCCCTCAACTCTCAACTAAATGCCACTGACAATCCCTCCTGCGCCCTGATCTaGGAAGAAAGCAGCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VYFRPKPLNSQLNATDNPSCALI*EESSNC Trigger: ACAGTTGCTGCTTTCTTCCAAGATCAGGGCGCAGGA...GGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTGAAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAAGGCAAGGAGGTGAGGAATACGTCTTCACCACTCTGTCCACACAAGTTGGCGGTAAAAGCCTaGCTGTTCGTATGGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLKGKEVRNTSSPLCPHKLAVKA*LFVWRN Trigger: ATTCCTCCATACGAACAGCAAGGCTTTTACCGCCAA...CTTGTGTGGACAGAGTGGTGAAGACGTATTCCTCACCTCCTTGCCTTTCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS CCA 72 bp | CCAGCCTGGTCCGCTGCCACGGCCCTTCTCGCAGGCTaGGACACAGAGAGTCCCTCCTCCGGTCTTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PAWSAATALLAG*DTESPSSGLAG Trigger: TCCTGCAAGACCGGAGGAGGGACTCTCTGTGTCCCAGCCTGCGAGAAGGGCCGTGGCAGCGGACCAGGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS CCA 72 bp | AGAATGGCATCGGACACCGTCATGGCGCCCCGGCCCTaGACACAGGCTTCAATCTCGGGCACCGAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RMASDTVMAPRP*TQASISGTESW Trigger: CCAGCTCTCGGTGCCCGAGATTGAAGCCTGTGTCCAGGGCCGGGGCGCCATGACGGTGTCCGATGCCATTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 ENSMUST00000127375.2 |
||
| CDS GCA 72 bp | CCCTCAGAGTCCATCACTGGAGCCCACGTCTCTAACTaGTCCTTCTCCTCACTGAGAGGCGGCGAAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSESITGAHVSN*SFSSLRGGEGE Trigger: CTCCCCTTCGCCGCCTCTCAGTGAGGAGAAGGAGCAGTTAGAGACGTGGGCTCCAGTGATGGACTCTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS TCA 72 bp | CTCACTGAGAGGCGGCGAAGGGGAGCTCCTGCGCCCTaGTCTTGGAAGAAAGCAGCAACTGTTGAGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LTERRRRGAPAP*SWKKAATVELV Trigger: GACCAGCTCAACAGTTGCTGCTTTCTTCCAAGATCAGGGCGCAGGAGCTCCCCTTCGCCGCCTCTCAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 |
||
| CDS TCA 72 bp | CTTCATTCTGCACCCTGGGGTCCTGAACTCGAACTGTaGTCACCTCCTCCAGGTCTTGGTTCTCCAACATCC | + |
|
Preference number: 6 (lower is better) Translates to: LHSAPWGPELEL*SPPPGLGSPTS Trigger: GGATGTTGGAGAACCAAGACCTGGAGGAGGTGATCACAGTTCGAGTTCAGGACCCCAGGGTGCAGAATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 ENSMUST00000127375.2 |
||
| CDS TCA 72 bp | CAAGGAAATGCTGGAGACCTTGACGTCGCTTCTCAATaGACTCATCGGAGCCGCCAAAGAAAGTGGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QGNAGDLDVASQ*THRSRQRKWTS Trigger: GGAAGTCCACTTTCTTTGGCGGCTCCGATGAGTTCATTGAGAAGCGACGTCAAGGTCTCCAGCATTTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021246.9 ENSMUST00000107661.10 ENSMUST00000127375.2 |
||