Pregenerated sensors for SNX10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038301Ensembl transcript IDs: ENSMUST00000049152.15, ENSMUST00000114439.8, ENSMUST00000137212.8, ENSMUST00000140560.8, ENSMUST00000149024.2, ENSMUST00000179365.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGCCACATGTCAGAGAGGCAGGCAGTCAGCAGTGCTGCGACTCTaGACTCTAGCTTCAGTCGAACACTGTGTTTACAGTAACTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: RATCQRGRQSAVLRL*TLASVEHCVYSNFL Trigger: GAGGAAGTTACTGTAAACACAGTGTTCGACTGAAGCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCCTCTCTGACATGTGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR GCA 90 bp | CTCAGGACTCCTGCAGAGCTGGGCTCGTTTTACATCCATGAGAACTaGTGTCATCACTACTGTGTCCAAGCCCAGAGGATGAACTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LRTPAELGSFYIHEN*CHHYCVQAQRMNFL Trigger: CAGAAAGTTCATCCTCTGGGCTTGGACACAGTAGTGATGACAGCAGTTCTCATGGATGTAAAACGAGCCCAGCTCTGCAGGAGTCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR CCA 90 bp | TTCTGCTGGTTCCCAGAGATACCTAGGAAGACTCTGGGGAACCCTTaGCTAATTATCCCAGGAAAACTGCTGCCTCGGCTGAAACTGGAA | + |
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Preference number: 1 (lower is better) Translates to: FCWFPEIPRKTLGNP*LIIPGKLLPRLKLE Trigger: TTCCAGTTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR CCA 90 bp | CATGCTTCAATGTCCTCGGAGTTCAGATGGCTCTGCAGGAAGAGGTaGAGGCTGCTATCGGAAAGCAAGAGTGCATTCTGCAGGACTTTT | + |
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Preference number: 1 (lower is better) Translates to: HASMSSEFRWLCRKR*RLLSESKSAFCRTF Trigger: AAAAGTCCTGCAGAATGCACTCTTGCTTTCCGATAGCAGCCTCCACCTCTTCCTGCAGAGCCATCTGAACTCCGAGGACATTGAAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR TCA 90 bp | ATTCCTTCTCAGGACTCCTGCAGAGCTGGGCTCGTTTTACATCCATaGGAACTGCTGTCATCACTACTGTGTCCAAGCCCAGAGGATGAA | + |
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Preference number: 1 (lower is better) Translates to: IPSQDSCRAGLVLHP*ELLSSLLCPSPEDE Trigger: TTCATCCTCTGGGCTTGGACACAGTAGTGATGACAGCAGTTCTCATGGATGTAAAACGAGCCCAGCTCTGCAGGAGTCCTGAGAAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR CCA 90 bp | AAGAGTGCATTCTGCAGGACTTTTCTGAGGAAATCTTCCAAGCCCTaGCGGCGTTGGTCGACATGCTGGCGATTGTTCATGTTGAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: KSAFCRTFLRKSSKP*RRWSTCWRLFMLKN Trigger: GTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAAGTCCTGCAGAATGCACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR GCA 90 bp | TTCATTGGAAGCAACAAGTTATCCCTCTTAGGTGAAAATTCCTTCTaGTGGTTCCCAGAGATACCTAGGAAGACTCTGGGGAACCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: FIGSNKLSLLGENSF*WFPEIPRKTLGNPW Trigger: CCAAGGGTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAAGGAATTTTCACCTAAGAGGGATAACTTGTTGCTTCCAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR CCA 90 bp | ATTGGAAGCAACAAGTTATCCCTCTTAGGTGAAAATTCCTTCTGCTaGTTCCCAGAGATACCTAGGAAGACTCTGGGGAACCCTTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: IGSNKLSLLGENSFC*FPEIPRKTLGNPWL Trigger: TAGCCAAGGGTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAAGGAATTTTCACCTAAGAGGGATAACTTGTTGCTTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR CCA 90 bp | TATTCATTAAAGCAAACTTGTGAATGGCTTCTTCCACCGAGTACTTaGTCTGCCCAGAAACACATGCTTCAATGTCCTCGGAGTTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: YSLKQTCEWLLPPST*SAQKHMLQCPRSSD Trigger: ATCTGAACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTTTAATGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGGGGAACCCTTGGCTAATTATCCCAGGAAAACTGCTGCCTCGGCTGAAACACTACCTGGGATACTaGCAGTGGCATTGGGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: TLGNPWLIIPGKLLPRLKHYLGY*QWHWVR Trigger: TCTTACCCAATGCCACTGTCAGTATCCCAGGTAGTG...TTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAAAATTCCTTCTGCTGGTTCCCAGAGATACCTAGGAAGACTCTGGGGAACCAGCCAGCATTCTTTCTaGCTGGGCACAATTTCGTTC | + |
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Preference number: 2 (lower is better) Translates to: VKIPSAGSQRYLGRLWGTSQHSF*LGTISF Trigger: GAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCT...GGTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAAGGAATTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR-3UTR GCA 90 bp | CACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAATGCAGTGCTGCGACTCTaGACTCTAGCTTCAGTCGAA | + |
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Preference number: 2 (lower is better) Translates to: HNDSSPEPVFKLILDSENAVLRL*TLASVE Trigger: TTCGACTGAAGCTAGAGTGCAGAGTCGCAGCACTGC...ATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCCAAGCCCAGAGGATGAACTTTCTGAATCATACTCTACGTCGGCGTCTTACCGAGTACTTGGTCTaGCCAGAAACACATGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CVQAQRMNFLNHTLRRRLTEYLV*PETHAS Trigger: TGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGT...AAGACGCCGACGTAGAGTATGATTCAGAAAGTTCATCCTCTGGGCTTGGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTGCTGTCATCACTACTGTGTCCAAGCCCAGAGGATGAACTTTCTGAATCACTTCCACCGAGTACTTaGTCTGCCCAGAAACACATG | + |
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Preference number: 2 (lower is better) Translates to: ELLSSLLCPSPEDELSESLPPST*SAQKHM Trigger: CATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAG...TGATTCAGAAAGTTCATCCTCTGGGCTTGGACACAGTAGTGATGACAGCAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR TCA 90 bp | CACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAATCACTACCTGGGATACTaGCAGTGGCATTGGGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: HNDSSPEPVFKLILDSENHYLGY*QWHWVR Trigger: TCTTACCCAATGCCACTGTCAGTATCCCAGGTAGTG...ATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCCCAGAGGATGAACTTTCTGAATCATACTCTACGTCGGCGTCTTTCTTCCGTTGGTCGACATGCTaGCGATTGTTCATGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PSPEDELSESYSTSASFFRWSTC*RLFMLK Trigger: TTTCAACATGAACAATCGCCAGCATGTCGACCAACG...GAAGAAAGACGCCGACGTAGAGTATGATTCAGAAAGTTCATCCTCTGGGCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGCCCAGAGGATGAACTTTCTGAATCATACTCTACGTCGGCGTCTTTCTTCATCGGAAAGCAAGAGTaGATTCTGCAGGACTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PSPEDELSESYSTSASFFIGKQE*ILQDFS Trigger: AGAAAAGTCCTGCAGAATGCACTCTTGCTTTCCGAT...GAAGAAAGACGCCGACGTAGAGTATGATTCAGAAAGTTCATCCTCTGGGCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCGTCTTTCTTCCCTTCTTCTTCTTCTTCGGGAAACCGTCTATTCATTAAAGCTGCCCAGAAACACATaGTTCAATGTCCTCGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: RRLSSLLLLLRETVYSLKLPRNT*FNVLGV Trigger: AACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAG...CTTTAATGAATAGACGGTTTCCCGAAGAAGAAGAAGAAGGGAAGAAAGACGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR CCA 90 bp | CGGCGTCTTTCTTCCCTTCTTCTTCTTCTTCGGGAAACCGTCTATTCATTAAAGAGCCAGCATTCTTTCTaGCTGGGCACAATTTCGTTC | + |
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Preference number: 2 (lower is better) Translates to: RRLSSLLLLLRETVYSLKSQHSF*LGTISF Trigger: GAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCT...CTTTAATGAATAGACGGTTTCCCGAAGAAGAAGAAGAAGGGAAGAAAGACGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCATCACTACTGTGTCCAAGCCCAGAGGATGAACTTTCTGAATCATACTCTATCTGCAGGACTTTTCTaGGGAAATCTTCCAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: CHHYCVQAQRMNFLNHTLSAGLF*GNLPSP Trigger: AGGGCTTGGAAGATTTCCTCAGAAAAGTCCTGCAGA...TAGAGTATGATTCAGAAAGTTCATCCTCTGGGCTTGGACACAGTAGTGATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR CCA 90 bp | CACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAATAAGAATTTCACTACCTaGGATACTGACAGTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: HNDSSPEPVFKLILDSENKNFTT*DTDSGI Trigger: AATGCCACTGTCAGTATCCCAGGTAGTGAAATTCTT...ATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR-3UTR CCA 90 bp | CACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAATCTTCACACAGAAGCTTaGCTAGAATTAGACAACATA | + |
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Preference number: 2 (lower is better) Translates to: HNDSSPEPVFKLILDSENLHTEA*LELDNI Trigger: TATGTTGTCTAATTCTAGCCAAGCTTCTGTGTGAAG...ATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR GCA 72 bp | TGTCAGAGAGGCAGGCAGTCAGCAGTGCTGCGACTCTaGACTCTAGCTTCAGTCGAACACTGTGTTTACAGT | + |
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Preference number: 3 (lower is better) Translates to: CQRGRQSAVLRL*TLASVEHCVYS Trigger: ACTGTAAACACAGTGTTCGACTGAAGCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCCTCTCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR GCA 72 bp | CCTGCAGAGCTGGGCTCGTTTTACATCCATGAGAACTaGTGTCATCACTACTGTGTCCAAGCCCAGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: PAELGSFYIHEN*CHHYCVQAQRM Trigger: CATCCTCTGGGCTTGGACACAGTAGTGATGACAGCAGTTCTCATGGATGTAAAACGAGCCCAGCTCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR CCA 72 bp | GGCTGCTTTTTGCTGCCGCTTTTGCACCCACGAGAGTaGGAGCCATTCATTGGAAGCAACAAGTTATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GCFLLPLLHPRE*EPFIGSNKLSL Trigger: GAGGGATAACTTGTTGCTTCCAATGAATGGCTCCCACTCTCGTGGGTGCAAAAGCGGCAGCAAAAAGCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR CCA 72 bp | TTCTGCAGGACTTTTCTGAGGAAATCTTCCAAGCCCTaGCGGCGTTGGTCGACATGCTGGCGATTGTTCATG | + |
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Preference number: 3 (lower is better) Translates to: FCRTFLRKSSKP*RRWSTCWRLFM Trigger: CATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAAGTCCTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCACATGTCAGAGAGGCAGGCAGTCAGCAGTGCTGCGACTCTGCACTCTAGCGCTTCACACAGAAGCTaGGCTAGAATTAGACAACAT | + |
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Preference number: 3 (lower is better) Translates to: SHMSERQAVSSAATLHSSASHRS*ARIRQH Trigger: ATGTTGTCTAATTCTAGCCAAGCTTCTGTGTGAAGC...GCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCCTCTCTGACATGTGGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR GCA 72 bp | CAGGAAGAGGTGGAGGCTGCTATCGGAAAGCAAGAGTaGATTCTGCAGGACTTTTCTGAGGAAATCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: QEEVEAAIGKQE*ILQDFSEEIFQ Trigger: TTGGAAGATTTCCTCAGAAAAGTCCTGCAGAATGCACTCTTGCTTTCCGATAGCAGCCTCCACCTCTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR CCA 72 bp | ACTTTTCTGAGGAAATCTTCCAAGCCCTGGCGGCGTTaGTCGACATGCTGGCGATTGTTCATGTTGAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: TFLRKSSKPWRR*STCWRLFMLKN Trigger: GTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR CCA 72 bp | AAGCAAACTTGTGAATGGCTTCTTCCACCGAGTACTTaGTCTGCCCAGAAACACATGCTTCAATGTCCTCGG | + |
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Preference number: 3 (lower is better) Translates to: KQTCEWLLPPST*SAQKHMLQCPR Trigger: CCGAGGACATTGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCTGGGGAACCCTTGGCTAATTATCCCAGGAAAACTGCTGCCTCGGCTGAAAGCTTCACACAGAAGCTaGGCTAGAATTAGACAACAT | + |
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Preference number: 3 (lower is better) Translates to: TLGNPWLIIPGKLLPRLKASHRS*ARIRQH Trigger: ATGTTGTCTAATTCTAGCCAAGCTTCTGTGTGAAGC...TTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR-3UTR CAA 90 bp | CACTACTGTGTCCAAGCCCAGAGGATGAACTTTCTGAATCATACTCTACGTCGGTCGACATGCTGGCGATaGTTCATGTTGAAAAACAGG | + |
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Preference number: 3 (lower is better) Translates to: HYCVQAQRMNFLNHTLRRSTCWR*FMLKNR Trigger: CCTGTTTTTCAACATGAACAATCGCCAGCATGTCGA...CCGACGTAGAGTATGATTCAGAAAGTTCATCCTCTGGGCTTGGACACAGTAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR TCA 72 bp | TCTTCGGGAAACCGTCTATTCATTAAAGCAAACTTGTaGATGGCTTCTTCCACCGAGTACTTGGTCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SSGNRLFIKANL*MASSTEYLVCP Trigger: TGGGCAGACCAAGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTTTAATGAATAGACGGTTTCCCGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| 3UTR CCA 72 bp | AACAAGTTATCCCTCTTAGGTGAAAATTCCTTCTGCTaGTTCCCAGAGATACCTAGGAAGACTCTGGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: NKLSLLGENSFC*FPEIPRKTLGN Trigger: GTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAAGGAATTTTCACCTAAGAGGGATAACTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| 3UTR CCA 72 bp | TTTATTAATACAATAACTCTTAAGTACCCAAGTAAATaGCTGCTTTTTGCTGCCGCTTTTGCACCCACGAGA | + |
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Preference number: 3 (lower is better) Translates to: FINTITLKYPSK*LLFAAAFAPTR Trigger: TCTCGTGGGTGCAAAAGCGGCAGCAAAAAGCAGCCATTTACTTGGGTACTTAAGAGTTATTGTATTAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| CDS-3UTR TCA 90 bp | ATTCTGCAGGACTTTTCTGAGGAAATCTTCCAAGCCCTGGCGGCGTTGGTCGACCAAAAGTCCTCCTTCTaGATCCTGGGGTCCCGGACC | + |
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Preference number: 4 (lower is better) Translates to: ILQDFSEEIFQALAALVDQKSSF*ILGSRT Trigger: GGTCCGGGACCCCAGGATTCAGAAGGAGGACTTTTG...GTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAAGTCCTGCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| CDS-3UTR CCA 90 bp | CCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCCCAGAACCTCCTTCTGAATCCTaGGGTCCCGGACCCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: PAFFLAGHNFVPKVVAPEPPSES*GPGPRH Trigger: GTGTCTGGGTCCGGGACCCCAGGATTCAGAAGGAGG...TTCTGGGGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000149024.2 ENSMUST00000179365.8 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGAAACACATGCTTCAATGTCCTCGGAGTTCAGATGGCTCTGCAGGAACCTCCTTCTGAATCCTaGGGTCCCGGACCCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: LPRNTCFNVLGVQMALQEPPSES*GPGPRH Trigger: GTGTCTGGGTCCGGGACCCCAGGATTCAGAAGGAGG...TTCCTGCAGAGCCATCTGAACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
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| CDS-3UTR TCA 90 bp | AGCCACATGTCAGAGAGGCAGGCAGTCAGCAGTGCTGCGACTCTGCACTCTAGCATTAAAGCAAACTTGTaGATGGCTTCTTCCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: SHMSERQAVSSAATLHSSIKANL*MASSTE Trigger: CTCGGTGGAAGAAGCCATTCACAAGTTTGCTTTAAT...GCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCCTCTCTGACATGTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| CDS-3UTR CCA 90 bp | TTGCACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGCCTCCTTCTGAATCCTaGGGTCCCGGACCCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: LHNDSSPEPVFKLILDSEPPSES*GPGPRH Trigger: GTGTCTGGGTCCGGGACCCCAGGATTCAGAAGGAGG...CTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| CDS-3UTR TCA 90 bp | GTCGAACACTGTGTTTACAGTAACTTCCTCATTGACACAGCAAGGGTGCCCTATCAAAAGTCCTCCTTCTaGATCCTGGGGTCCCGGACC | + |
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Preference number: 4 (lower is better) Translates to: VEHCVYSNFLIDTARVPYQKSSF*ILGSRT Trigger: GGTCCGGGACCCCAGGATTCAGAAGGAGGACTTTTG...ATAGGGCACCCTTGCTGTGTCAATGAGGAAGTTACTGTAAACACAGTGTTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGCAGTCAGCAGTGCTGCGACTCTGCACTCTAGCTTCAGTCGAACACTGTTACATCCATGAGAACTaGTGTCATCACTACTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GRQSAVLRLCTLASVEHCYIHEN*CHHYCV Trigger: GACACAGTAGTGATGACAGCAGTTCTCATGGATGTA...ACAGTGTTCGACTGAAGCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| CDS-3UTR CCA 90 bp | GAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGCCTCCTTCTGAATCCTaGGGTCCCGGACCCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: ESIMSQHSFWLGTISFLRPPSES*GPGPRH Trigger: GTGTCTGGGTCCGGGACCCCAGGATTCAGAAGGAGG...CCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000149024.2 ENSMUST00000179365.8 |
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| 3UTR CAA 72 bp | AGTACCCAAGTAAATGGCTGCTTTTTGCTGCCGCTTTaGCACCCACGAGAGTGGGAGCCATTCATTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: STQVNGCFLLPL*HPREWEPFIGS Trigger: GCTTCCAATGAATGGCTCCCACTCTCGTGGGTGCAAAAGCGGCAGCAAAAAGCAGCCATTTACTTGGGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
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| CDS-3UTR TCA 90 bp | ATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGCAAAAGTCCTCCTTCTaGATCCTGGGGTCCCGGACC | + |
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Preference number: 4 (lower is better) Translates to: IYYEPAFFLAGHNFVPKVQKSSF*ILGSRT Trigger: GGTCCGGGACCCCAGGATTCAGAAGGAGGACTTTTG...CACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000149024.2 ENSMUST00000179365.8 |
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| CDS-3UTR TCA 90 bp | GAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGCAAAAGTCCTCCTTCTaGATCCTGGGGTCCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ESIMSQHSFWLGTISFLRQKSSF*ILGSRT Trigger: GGTCCGGGACCCCAGGATTCAGAAGGAGGACTTTTG...CCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000149024.2 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | TATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCGTACCAGCAACGCGTTaGTTTGGAGTCTTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YEPAFFLAGHNFVPKVVAVPATR*FGVFAS Trigger: TGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTAC...GGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCCCAGAACTGCCCAGAAACACATaGTTCAATGTCCTCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PAFFLAGHNFVPKVVAPELPRNT*FNVLGV Trigger: AACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAG...TTCTGGGGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGGGGAACCCTTGGCTAATTATCCCAGGAAAACTGCTGCCTCGGCTGAAACTGCCCAGAAACACATaGTTCAATGTCCTCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGNPWLIIPGKLLPRLKLPRNT*FNVLGV Trigger: AACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAG...TTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCCCAGAAACCGAGTACTTGGTCTaGCCAGAAACACATGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAFFLAGHNFVPKVVAPETEYLV*PETHAS Trigger: TGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGT...TTCTGGGGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | GCAATAAAGGGCCGTATGGCATTCACAGACCTTATAGCTTCACACAGAAGCTTGTCCTCGGAGTTCAGATaGCTCTGCAGGAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIKGRMAFTDLIASHRSLSSEFR*LCRKRW Trigger: CCACCTCTTCCTGCAGAGCCATCTGAACTCCGAGGA...CAAGCTTCTGTGTGAAGCTATAAGGTCTGTGAATGCCATACGGCCCTTTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCCTTCCACCGAGTACTTaGTCTGCCCAGAAACACATG | + |
|
Preference number: 4 (lower is better) Translates to: YEPAFFLAGHNFVPKVVALPPST*SAQKHM Trigger: CATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAG...GGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAGCAACGCGTTGCTTTaGAGTCTTTGCCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHNDSSPEPVFKLILDSESNALL*SLCLSH Trigger: GTGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCT...CTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | TGGCATTGGGTAAGAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTCCTCGGAGTTCAGATaGCTCTGCAGGAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WHWVRIYYEPAFFLAGHNSSEFR*LCRKRW Trigger: CCACCTCTTCCTGCAGAGCCATCTGAACTCCGAGGA...ATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTCTTACCCAATGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | GAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTCCTCGGAGTTCAGATaGCTCTGCAGGAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESIMSQHSFWLGTISFLRSSEFR*LCRKRW Trigger: CCACCTCTTCCTGCAGAGCCATCTGAACTCCGAGGA...CCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| 3UTR CAA 72 bp | GACTTTTCTGAGGAAATCTTCCAAGCCCTGGCGGCGTaGGTCGACATGCTGGCGATTGTTCATGTTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DFSEEIFQALAA*VDMLAIVHVEK Trigger: TTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149024.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTGGGGAACCCTTGGCTAATTATCCCAGGAAAACTGCTGCCTCGGCTGAAAATTAAAGCAAACTTGTaGATGGCTTCTTCCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLGNPWLIIPGKLLPRLKIKANL*MASSTE Trigger: CTCGGTGGAAGAAGCCATTCACAAGTTTGCTTTAAT...TTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | TTGCACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGGTACCAGCAACGCGTTaGTTTGGAGTCTTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHNDSSPEPVFKLILDSEVPATR*FGVFAS Trigger: TGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTAC...CTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCCGTTGGTCGACATGCTaGCGATTGTTCATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YEPAFFLAGHNFVPKVVARWSTC*RLFMLK Trigger: TTTCAACATGAACAATCGCCAGCATGTCGACCAACG...GGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | GTCGAACACTGTGTTTACAGTAACTTCCTCATTGACACAGCAAGGGTGCCCTATCTTCCACCGAGTACTTaGTCTGCCCAGAAACACATG | + |
|
Preference number: 4 (lower is better) Translates to: VEHCVYSNFLIDTARVPYLPPST*SAQKHM Trigger: CATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAG...ATAGGGCACCCTTGCTGTGTCAATGAGGAAGTTACTGTAAACACAGTGTTCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGGGAACCCTTGGCTAATTATCCCAGGAAAACTGCTGCCTCGGCTGAAAAAGCAAACTTGTGAATaGCTTCTTCCACCGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TLGNPWLIIPGKLLPRLKKQTCE*LLPPST Trigger: AGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTT...TTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCCCAGAAAAGCAAACTTGTGAATaGCTTCTTCCACCGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PAFFLAGHNFVPKVVAPEKQTCE*LLPPST Trigger: AGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTT...TTCTGGGGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR TCA 90 bp | TTGCACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGTCTGCAGGACTTTTCTaGGGAAATCTTCCAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNDSSPEPVFKLILDSESAGLF*GNLPSP Trigger: AGGGCTTGGAAGATTTCCTCAGAAAAGTCCTGCAGA...CTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | TGGCATTGGGTAAGAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATGTACCAGCAACGCGTTaGTTTGGAGTCTTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WHWVRIYYEPAFFLAGHNVPATR*FGVFAS Trigger: TGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTAC...ATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTCTTACCCAATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | TGGCATTGGGTAAGAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATCTTCCACCGAGTACTTaGTCTGCCCAGAAACACATG | + |
|
Preference number: 4 (lower is better) Translates to: WHWVRIYYEPAFFLAGHNLPPST*SAQKHM Trigger: CATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAG...ATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTCTTACCCAATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | CACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAATCTGCCCAGAAACACATaGTTCAATGTCCTCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HNDSSPEPVFKLILDSENLPRNT*FNVLGV Trigger: AACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAG...ATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | CACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAATACCGAGTACTTGGTCTaGCCAGAAACACATGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HNDSSPEPVFKLILDSENTEYLV*PETHAS Trigger: TGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGT...ATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | TGGCATTGGGTAAGAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATACCGAGTACTTGGTCTaGCCAGAAACACATGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WHWVRIYYEPAFFLAGHNTEYLV*PETHAS Trigger: TGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGT...ATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTCTTACCCAATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | GCAATAAAGGGCCGTATGGCATTCACAGACCTTATAGCTTCACACAGAAGCTTGCGTTGGTCGACATGCTaGCGATTGTTCATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AIKGRMAFTDLIASHRSLRWSTC*RLFMLK Trigger: TTTCAACATGAACAATCGCCAGCATGTCGACCAACG...CAAGCTTCTGTGTGAAGCTATAAGGTCTGTGAATGCCATACGGCCCTTTATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR TCA 90 bp | GCAATAAAGGGCCGTATGGCATTCACAGACCTTATAGCTTCACACAGAAGCTTGCTCGTTTTACATCCATaGGAACTGCTGTCATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: AIKGRMAFTDLIASHRSLLVLHP*ELLSSL Trigger: TAGTGATGACAGCAGTTCTCATGGATGTAAAACGAG...CAAGCTTCTGTGTGAAGCTATAAGGTCTGTGAATGCCATACGGCCCTTTATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | TTGCACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGTACATCCATGAGAACTaGTGTCATCACTACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHNDSSPEPVFKLILDSEYIHEN*CHHYCV Trigger: GACACAGTAGTGATGACAGCAGTTCTCATGGATGTA...CTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGCGTTGGTCGACATGCTaGCGATTGTTCATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IYYEPAFFLAGHNFVPKVRWSTC*RLFMLK Trigger: TTTCAACATGAACAATCGCCAGCATGTCGACCAACG...CACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGATTAAAGCAAACTTGTaGATGGCTTCTTCCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYYEPAFFLAGHNFVPKVIKANL*MASSTE Trigger: CTCGGTGGAAGAAGCCATTCACAAGTTTGCTTTAAT...CACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR TCA 90 bp | GAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGCTCGTTTTACATCCATaGGAACTGCTGTCATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: ESIMSQHSFWLGTISFLRLVLHP*ELLSSL Trigger: TAGTGATGACAGCAGTTCTCATGGATGTAAAACGAG...CCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | CACAATGACTCATCGCCAGAGCCAGTGTTTAAGCTGATTTTGGACAGTGAGAATATCGGAAAGCAAGAGTaGATTCTGCAGGACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HNDSSPEPVFKLILDSENIGKQE*ILQDFS Trigger: AGAAAAGTCCTGCAGAATGCACTCTTGCTTTCCGAT...ATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | GAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGATCGGAAAGCAAGAGTaGATTCTGCAGGACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESIMSQHSFWLGTISFLRIGKQE*ILQDFS Trigger: AGAAAAGTCCTGCAGAATGCACTCTTGCTTTCCGAT...CCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR GCA 90 bp | TGGCATTGGGTAAGAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTACATCCATGAGAACTaGTGTCATCACTACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WHWVRIYYEPAFFLAGHNYIHEN*CHHYCV Trigger: GACACAGTAGTGATGACAGCAGTTCTCATGGATGTA...ATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTCTTACCCAATGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGAAGCAAACTTGTGAATaGCTTCTTCCACCGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IYYEPAFFLAGHNFVPKVKQTCE*LLPPST Trigger: AGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTT...CACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | AGCCACATGTCAGAGAGGCAGGCAGTCAGCAGTGCTGCGACTCTGCACTCTAGCCAGCAACGCGTTGCTTaGGAGTCTTTGCCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHMSERQAVSSAATLHSSQQRVA*ESLPQP Trigger: TGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTG...GCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCCTCTCTGACATGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | TATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCCAGCAACGCGTTGCTTaGGAGTCTTTGCCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YEPAFFLAGHNFVPKVVAQQRVA*ESLPQP Trigger: TGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTG...GGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCAGTCAGCAGTGCTGCGACTCTGCACTCTAGCTTCAGTCGAACACTGTTCGACATGCTGGCGATaGTTCATGTTGAAAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRQSAVLRLCTLASVEHCSTCWR*FMLKNR Trigger: CCTGTTTTTCAACATGAACAATCGCCAGCATGTCGA...ACAGTGTTCGACTGAAGCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | TATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCTGTACCAGCAACGCGTaGCTTTGGAGTCTTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YEPAFFLAGHNFVPKVVACTSNA*LWSLCL Trigger: GAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACA...GGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS CCA 90 bp | TCTCATAGTCGATATAAGAGTGCCAAAAGTCCTCCTTCTGAATCCTaGGGTCCCGGACCCAGACACTCACGAACTCCTCTTTCTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHSRYKSAKSPPSES*GPGPRHSRTPLSAV Trigger: AACAGCAGAAAGAGGAGTTCGTGAGTGTCTGGGTCCGGGACCCCAGGATTCAGAAGGAGGACTTTTGGCACTCTTATATCGACTATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000140560.8 ENSMUST00000149024.2 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | GAATCTATTATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGCAGCAACGCGTTGCTTaGGAGTCTTTGCCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESIMSQHSFWLGTISFLRQQRVA*ESLPQP Trigger: TGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTG...CCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | GCAATAAAGGGCCGTATGGCATTCACAGACCTTATAGCTTCACACAGAAGCTTGTGTACCAGCAACGCGTaGCTTTGGAGTCTTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AIKGRMAFTDLIASHRSLCTSNA*LWSLCL Trigger: GAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACA...CAAGCTTCTGTGTGAAGCTATAAGGTCTGTGAATGCCATACGGCCCTTTATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | TATGAGCCAGCATTCTTTCTGGCTGGGCACAATTTCGTTCCTAAGGTGGTAGCCTCGACATGCTGGCGATaGTTCATGTTGAAAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: YEPAFFLAGHNFVPKVVASTCWR*FMLKNR Trigger: CCTGTTTTTCAACATGAACAATCGCCAGCATGTCGA...GGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000179365.8 |
||
| CDS-3UTR CAA 90 bp | GTGAAAATTCCTTCTGCTGGTTCCCAGAGATACCTAGGAAGACTCTGGGGAACCTCGACATGCTGGCGATaGTTCATGTTGAAAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKIPSAGSQRYLGRLWGTSTCWR*FMLKNR Trigger: CCTGTTTTTCAACATGAACAATCGCCAGCATGTCGA...GGTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAAGGAATTTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049152.15 ENSMUST00000179365.8 |
||
| CDS GCA 90 bp | GGAAGTTCTGGTAATTGTACCAGCAACGCGTTGCTTTGGAGTCTTTaGCTCAGCCACACGAACTCTCTATACCTTCTTCGTACACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GSSGNCTSNALLWSL*LSHTNSLYLLRTQD Trigger: ATCTTGTGTACGAAGAAGGTATAGAGAGTTCGTGTGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACAATTACCAGAACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000140560.8 ENSMUST00000179365.8 |
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| CDS CCA 90 bp | TTTCTGAGGAAATCTTCCAAGCCCTGGCGGCGTTGGTCGACATGCTaGCGATTGTTCATGTTGAAAAACAGGTTTTTAGACGGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLRKSSKPWRRWSTC*RLFMLKNRFLDGSS Trigger: AGAACTTCCGTCTAAAAACCTGTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000179365.8 |
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| CDS CCA 90 bp | TTTTTAGACGGAAGTTCTGGTAATTGTACCAGCAACGCGTTGCTTTaGAGTCTTTGCCTCAGCCACACGAACTCTCTATACCTTCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: FLDGSSGNCTSNALL*SLCLSHTNSLYLLR Trigger: ACGAAGAAGGTATAGAGAGTTCGTGTGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACAATTACCAGAACTTCCGTCTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000140560.8 ENSMUST00000179365.8 |
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| CDS CCA 72 bp | CGATATAAGAGTGCCAAAAGTCCTCCTTCTGAATCCTaGGGTCCCGGACCCAGACACTCACGAACTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RYKSAKSPPSES*GPGPRHSRTPL Trigger: AAGAGGAGTTCGTGAGTGTCTGGGTCCGGGACCCCAGGATTCAGAAGGAGGACTTTTGGCACTCTTATATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000140560.8 ENSMUST00000149024.2 ENSMUST00000179365.8 |
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| CDS CAA 72 bp | TCCAAGCCCTGGCGGCGTTGGTCGACATGCTGGCGATaGTTCATGTTGAAAAACAGGTTTTTAGACGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SKPWRRWSTCWR*FMLKNRFLDGS Trigger: ACTTCCGTCTAAAAACCTGTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000179365.8 |
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| CDS CCA 72 bp | GGAAGTTCTGGTAATTGTACCAGCAACGCGTTGCTTTaGAGTCTTTGCCTCAGCCACACGAACTCTCTATAC | + |
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Preference number: 6 (lower is better) Translates to: GSSGNCTSNALL*SLCLSHTNSLY Trigger: GTATAGAGAGTTCGTGTGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACAATTACCAGAACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000140560.8 ENSMUST00000179365.8 |
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| CDS CAA 72 bp | TTAGACGGAAGTTCTGGTAATTGTACCAGCAACGCGTaGCTTTGGAGTCTTTGCCTCAGCCACACGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LDGSSGNCTSNA*LWSLCLSHTNS Trigger: AGAGTTCGTGTGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACAATTACCAGAACTTCCGTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000140560.8 ENSMUST00000179365.8 |
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| CDS CAA 90 bp | AGGAAATCTTCCAAGCCCTGGCGGCGTTGGTCGACATGCTGGCGATaGTTCATGTTGAAAAACAGGTTTTTAGACGGAAGTTCTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: RKSSKPWRRWSTCWR*FMLKNRFLDGSSGN Trigger: ATTACCAGAACTTCCGTCTAAAAACCTGTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000179365.8 |
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| CDS CAA 90 bp | ATTCTGCAGGACTTTTCTGAGGAAATCTTCCAAGCCCTGGCGGCGTaGGTCGACATGCTGGCGATTGTTCATGTTGAAAAACAGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: ILQDFSEEIFQALAA*VDMLAIVHVEKQVF Trigger: AAAAACCTGTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAAGTCCTGCAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000179365.8 |
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| CDS CCA 72 bp | AAATCTTCCAAGCCCTGGCGGCGTTGGTCGACATGCTaGCGATTGTTCATGTTGAAAAACAGGTTTTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: KSSKPWRRWSTC*RLFMLKNRFLD Trigger: GTCTAAAAACCTGTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000049152.15 ENSMUST00000114439.8 ENSMUST00000137212.8 ENSMUST00000179365.8 |
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