Pregenerated sensors for SNX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032382Ensembl transcript IDs: ENSMUST00000034946.15, ENSMUST00000137542.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACGTGGAAGCTAAATGAAATGTTGGTTAGAGTAACTGGGAACAGTTaGTCTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGCCAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TWKLNEMLVRVTGNS*SVGQSGRAKSSQGR Trigger: CCTGCCTTGGCTGGACTTAGCCCTTCCACTCTGCCCCACAGACAAACTGTTCCCAGTTACTCTAACCAACATTTCATTTAGCTTCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| 3UTR-3UTR CCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGGGAACAGTTTGTCTGTaGGGCAGAGTGGAAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: GTIRSNRKRYSQFLNHILGTVCL*GRVEGL Trigger: TAGCCCTTCCACTCTGCCCCACAGACAAACTGTTCC...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | GGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGTTCTGCAGCGTGGCTTaGGCATCCTGCCAGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GLSPAKAGASVRVHRGRRFCSVA*ASCQRC Trigger: GCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAA...CCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACACTGCCGCGGCGCCAGTaGAAATATCCTCCCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LSPAKAGASVRVHRGRRTLPRRQ*KYPPPR Trigger: CCGAGGGGGAGGATATTTTCACTGGCGCCGCGGCAG...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | CAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAGCGCCACTCAAAGCCTaGGTGCCCACAGCTCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QPRQGHQLGSIEEEGQCIAPLKA*VPTARG Trigger: GCCTCGAGCTGTGGGCACGCAGGCTTTGAGTGGCGC...TATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGCGGAGCTCCCAAGCATaGCTAGACTCTTGGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LWGRVEGLSPAKAGASVRRSSQA*LDSWQT Trigger: TGTTTGCCAAGAGTCTAGCCATGCTTGGGAGCTCCG...CCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCCTTCCACTCTGCCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | GGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGTTCCACTGTGGCATCTaGAAAGAGATCCTGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLSPAKAGASVRVHRGRRFHCGI*KEILWL Trigger: GAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAA...CCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | CAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAGCTTCCGTAGGCGCTaGTCCTCACACTCTACCTCC | + |
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Preference number: 4 (lower is better) Translates to: QPRQGHQLGSIEEEGQCISFRRR*SSHSTS Trigger: GGAGGTAGAGTGTGAGGAGCAGCGCCTACGGAAGCT...TATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | CTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGTCATCCTTAGCCTGCTaGAGTTTGTCAGGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LWGRVEGLSPAKAGASVRSSLAC*SLSGLL Trigger: CAACAAGCCTGACAAACTGCAGCAGGCTAAGGATGA...CCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCCTTCCACTCTGCCCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | GGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGGGAAGAAGTCATTGTTaGCCTGTTCCTGGTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GLSPAKAGASVRVHRGRRGRSHC*PVPGGA Trigger: AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCC...CCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | CAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAAGGCAGGTCTCCACCACAGCATaGAGCTTCCGTAGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QGHQLGSIEEEGQCIKRQVSTTA*SFRRRC Trigger: GCAGCGCCTACGGAAGCTGCATGCTGTGGTGGAGAC...CTGCCTTTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATATCCACCTCAGCCAGTTaGGAGAGCGCTCGAGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: QPRQGHQLGSIEEEGQCISTSAS*ESARES Trigger: ACTTTCTCGAGCGCTCTCCCAACTGGCTGAGGTGGA...TATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAGTGGAGGAGGCACAATaGAACCATTCTGGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: QPRQGHQLGSIEEEGQCIVEEAQ*NHSGSA Trigger: AGCACTCCCAGAATGGTTTCATTGTGCCTCCTCCAC...TATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | CAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAAGGCAGGCTGCCATGTCTTCATaGGCTGGTCGAAGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QGHQLGSIEEEGQCIKRQAAMSS*AGRRQL Trigger: GAGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC...CTGCCTTTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGGGCCCACAGCAGCCGTaGCTCAGACTCCCGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILGPQQP*LRLPLL Trigger: AAGAAGCGGGAGTCTGAGGCACGGCTGCTGTGGGCC...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACACTCATAGCTTGGCTGTaGCTTCGGAGAATTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSPAKAGASVRVHRGRRTLIAWL*LRRICG Trigger: GCCACAAATTCTCCGAAGCCACAGCCAAGCTATGAG...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | GGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGGCTAGTTCTTTCCTATaGTTGACTAGAGTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GLSPAKAGASVRVHRGRRASSFL*LTRVST Trigger: GGTGGAGACTCTAGTCAACCATAGGAAAGAACTAGC...CCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAGCTTCTTCTGCAGCGTaGCTTGAGCATCCTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRQGHQLGSIEEEGQCIKASSAA*LEHPAS Trigger: GCTGGCAGGATGCTCAAGCCACGCTGCAGAAGAAGC...TTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACACTGGGAGTGCTTCTCTaGAAGCTTCTCATAAAGACC | + |
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Preference number: 4 (lower is better) Translates to: LSPAKAGASVRVHRGRRTLGVLL*KLLIKT Trigger: GGTCTTTATGAGAAGCTTTCAGAGAAGCACTCCCAG...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGTCATCACGTGGTTTTTaGAATCCTTGGACTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LWGRVEGLSPAKAGASVRSSRGF*NPWTSL Trigger: AAGAGAAGTCCAAGGATTTCAAAAACCACGTGATGA...CCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCCTTCCACTCTGCCCCACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACACAGTATTTTGCCAGCTaGTGCTGGGAATGTAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSPAKAGASVRVHRGRRTQYFAS*CWECRS Trigger: ACTCCTACATTCCCAGCAGCAGCTGGCAAAATACTG...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAACATGTCTTCATGCGCTaGTCGAAGGCAGCTCGGACA | + |
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Preference number: 4 (lower is better) Translates to: PRQGHQLGSIEEEGQCIKHVFMR*SKAART Trigger: TGTCCGAGCTGCCTTCGACCAGCGCATGAAGACATG...TTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACACTTTTCACTGCAAACTaGCTACTTCTGAACATCGGT | + |
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Preference number: 4 (lower is better) Translates to: LSPAKAGASVRVHRGRRTLFTAN*LLLNIG Trigger: ACCGATGTTCAGAAGTAGGCAGTTTGCAGTGAAAAG...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGGTTTTCTTTGGAGACTaGGGCTTAGTGGCTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILVFFGD*GLVAAA Trigger: CGCGGCAGCCACTAAGCCCCAGTCTCCAAAGAAAAC...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAAGGCAGGGATGTGGTTTTCTTTaGAGACTGGGGCTTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QGHQLGSIEEEGQCIKRQGCGFL*RLGLSG Trigger: GCCACTAAGCCCCAGTCTCCAAAGAAAACCACATCC...CTGCCTTTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAACAGCTCCTCATAGCTTaGCTGTGGCTTCGGAGAATT | + |
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Preference number: 4 (lower is better) Translates to: PRQGHQLGSIEEEGQCIKQLLIA*LWLRRI Trigger: AATTCTCCGAAGCCACAGCCAAGCTATGAGGAGCTG...TTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAAGGCAGAGCTTGTCTGTGTGGTaGCTTTGTAGGCTACATAGG | + |
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Preference number: 4 (lower is better) Translates to: QGHQLGSIEEEGQCIKRQSLSVW*LCRLHR Trigger: CCTATGTAGCCTACAAAGTCACCACACAGACAAGCT...CTGCCTTTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAATTTCCAGAAACTCCCTaGCATCTGGGTCCTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: PRQGHQLGSIEEEGQCIKFPETP*HLGPVT Trigger: TGTTACAGGACCCAGATGTCAGGGAGTTTCTGGAAA...TTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAGTTCTTTCCTATGGTTaGCTAGAGTCTCCACCACAG | + |
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Preference number: 4 (lower is better) Translates to: PRQGHQLGSIEEEGQCIKVLSYG*LESPPQ Trigger: CTGTGGTGGAGACTCTAGTCAACCATAGGAAAGAAC...TTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGTCAGGAGATGGCCTTTaGCTCAGGAAGGAAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILSGDGL*LRKEGF Trigger: GAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTGA...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAAGGCAGGGGATAGTTCCACTGTaGCATCTGCAAAGAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: QGHQLGSIEEEGQCIKRQGIVPL*HLQRDP Trigger: AGGATCTCTTTGCAGATGCCACAGTGGAACTATCCC...CTGCCTTTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAACAATGAAACCATTCTaGGAGTGCTTCTCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: QPRQGHQLGSIEEEGQCITMKPF*ECFSES Trigger: GCTTTCAGAGAAGCACTCCCAGAATGGTTTCATTGT...TATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | CCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAATTGGCCTGTTCCTGGTaGAGCTGCTCAATCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PRQGHQLGSIEEEGQCIKLACSW*SCSIFS Trigger: AGAAAAGATTGAGCAGCTCCACCAGGAACAGGCCAA...TTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | CCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAACAAACTGCCTACTTCTaGACATCGGTAAGCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PRQGHQLGSIEEEGQCIKQTAYF*TSVSLS Trigger: AGACAAGCTTACCGATGTTCAGAAGTAGGCAGTTTG...TTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGTGTGGCTCTTGGTCTTaGTCCTCATGGATCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILCGSWS*SSWIPF Trigger: GAATGGGATCCATGAGGACCAAGACCAAGAGCCACA...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGCCTGGCATTGTCTTCTaGTTATTCTGTGTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILPGIVF*LFCVLS Trigger: GGACAGCACACAGAATAACCAGAAGACAATGCCAGG...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| 3UTR CAA 72 bp | CTAAATGAAATGTTGGTTAGAGTAACTGGGAACAGTTaGTCTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LNEMLVRVTGNS*SVGQSGRAKSS Trigger: GCTGGACTTAGCCCTTCCACTCTGCCCCACAGACAAACTGTTCCCAGTTACTCTAACCAACATTTCATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGGACCCAGGAAGTCACTaGATCTTCTTTTCACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILDPGSH*IFFSLQ Trigger: TTGCAGTGAAAAGAAGATTCAGTGACTTCCTGGGTC...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGCTGGGTCCTGTAACATaGTGGGATGATTCACAATTC | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILLGPVT*WDDSQF Trigger: GAATTGTGAATCATCCCACCATGTTACAGGACCCAG...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGAGGCAGCTCGGACAATaGCCAGGAGGCGAATATAGT | + |
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Preference number: 4 (lower is better) Translates to: YINTPPQPIIPPPIVGLLRQLGQ*PGGEYS Trigger: ACTATATTCGCCTCCTGGCCATTGTCCGAGCTGCCT...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGTCTTCTCAGGATCGGTaGTACCAACTGTCAAATCAA | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILSSQDR*YQLSNQ Trigger: TTGATTTGACAGTTGGTATCACCGATCCTGAGAAGA...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR GCA 90 bp | TATTTATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTGGCTTCCCAGTATTTTaGCAGCTGCTGCTGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: YLYQHSTPTYNSTTYCRSGFPVF*QLLLGM Trigger: CATTCCCAGCAGCAGCTGGCAAAATACTGGGAAGCC...AGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGAGATCCTGTGGCTCTTaGTCTTGGTCCTCATGGATC | + |
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Preference number: 4 (lower is better) Translates to: YINTPPQPIIPPPIVGLLRSCGS*SWSSWI Trigger: GATCCATGAGGACCAAGACCAAGAGCCACAGGATCT...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGTGCAAAGAGATCCTGTaGCTCTTGGTCTTGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: YINTPPQPIIPPPIVGLLCKEIL*LLVLVL Trigger: GAGGACCAAGACCAAGAGCCACAGGATCTCTTTGCA...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATTTATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGCCAGCTGCTGCTaGGAATGTAGGAGTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: YLYQHSTPTYNSTTYCRSFASCC*ECRSVS Trigger: GGAGACACTCCTACATTCCCAGCAGCAGCTGGCAAA...AGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR TCA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGCTCGAACCAAATGTCTaGTTCATTCATCTTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: GTIRSNRKRYSQFLNHILLEPNV*FIHLDG Trigger: ACCATCAAGATGAATGAATCAGACATTTGGTTCGAG...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATTTATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTGCATGGCTAGACTCTTaGCAAACAGGGCTGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YLYQHSTPTYNSTTYCRSAWLDS*QTGLCS Trigger: TGAACACAGCCCTGTTTGCCAAGAGTCTAGCCATGC...AGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGTTGTTGGCCTGTTCCTaGTGGAGCTGCTCAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YINTPPQPIIPPPIVGLLLLACS*WSCSIF Trigger: AAAGATTGAGCAGCTCCACCAGGAACAGGCCAACAA...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGCCTTTCGGACAACTGTaGAAATCCTTTCAAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YINTPPQPIIPPPIVGLLPFGQL*KSFQSP Trigger: GGGACTTTGAAAGGATTTCCACAGTTGTCCGAAAGG...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CCA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGGGTCCTGTAACATGGTaGGATGATTCACAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YINTPPQPIIPPPIVGLLGPVTW*DDSQFF Trigger: AAAGAATTGTGAATCATCCCACCATGTTACAGGACC...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 90 bp | TGGCCCACAGCAGCCGTGCCTCAGACTCCCGCTTCTTCTGCAGCGTaGCTTGAGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WPTAAVPQTPASSAA*LEHPASAAMSSCAG Trigger: ACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAAGAAGCGGGAGTCTGAGGCACGGCTGCTGTGGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 90 bp | CACAGCAGCCGTGCCTCAGACTCCCGCTTCTTCTGCAGCGTGGCTTaGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSSRASDSRFFCSVA*ASCQRCHVFMRWSK Trigger: CTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAAGAAGCGGGAGTCTGAGGCACGGCTGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS GCA 90 bp | TCTGCAGCGTGGCTTGAGCATCCTGCCAGCGCTGCCATGTCTTCATaGGCTGGTCGAAGGCAGCTCGGACAATGGCCAGGAGGCGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SAAWLEHPASAAMSS*AGRRQLGQWPGGEY Trigger: ATATTCGCCTCCTGGCCATTGTCCGAGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGTTAGCCTGCTGCAGTTaGTCAGGCTTGTTGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWGRVEGLSPAKAGASVRLACCS*SGLLAH Trigger: GTGGGCCAACAAGCCTGACAAACTGCAGCAGGCTAA...CCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCCTTCCACTCTGCCCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGAGATCCTGTGGCTCTaGGTCTTGGTCCTCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWGRVEGLSPAKAGASVREILWL*VLVLMD Trigger: ATCCATGAGGACCAAGACCAAGAGCCACAGGATCTC...CCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCCTTCCACTCTGCCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACATTCCACCTCAGCCAGTaGGGAGAGCGCTCGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPAKAGASVRVHRGRRTFHLSQ*GERSRK Trigger: CTTTCTCGAGCGCTCTCCCAACTGGCTGAGGTGGAA...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | GGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGAGGCTTCCCAGTATTTaGCCAGCTGCTGCTGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLSPAKAGASVRVHRGRRRLPSI*PAAAGN Trigger: ATTCCCAGCAGCAGCTGGCAAAATACTGGGAAGCCT...CCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 90 bp | TGTTCCTGGTGGAGCTGCTCAATCTTTTCTTCCACCTCAGCCAGTTaGGAGAGCGCTCGAGAAAGTGCTGTGTTGTCCTCGGAGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSWWSCSIFSSTSAS*ESARESAVLSSELP Trigger: TGGGAGCTCCGAGGACAACACAGCACTTTCTCGAGCGCTCTCCCAACTGGCTGAGGTGGAAGAAAAGATTGAGCAGCTCCACCAGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS GCA 90 bp | TGGTTGACTAGAGTCTCCACCACAGCATGCAGCTTCCGTAGGCGCTaGTCCTCACACTCTACCTCCTGGAGTTTCTCCTCGAACCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: WLTRVSTTACSFRRR*SSHSTSWSFSSNQM Trigger: CATTTGGTTCGAGGAGAAACTCCAGGAGGTAGAGTGTGAGGAGCAGCGCCTACGGAAGCTGCATGCTGTGGTGGAGACTCTAGTCAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 90 bp | AGAGCGCTCGAGAAAGTGCTGTGTTGTCCTCGGAGCTCCCAAGCATaGCTAGACTCTTGGCAAACAGGGCTGTGTTCAGCGCTAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RALEKVLCCPRSSQA*LDSWQTGLCSALVL Trigger: AAGAACTAGCGCTGAACACAGCCCTGTTTGCCAAGAGTCTAGCCATGCTTGGGAGCTCCGAGGACAACACAGCACTTTCTCGAGCGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACACTGTGGCTCTTGGTCTaGGTCCTCATGGATCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LSPAKAGASVRVHRGRRTLWLLV*VLMDPI Trigger: AATGGGATCCATGAGGACCAAGACCAAGAGCCACAG...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | GGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGGGGTTTTGCCTGGCATaGTCTTCTGGTTATTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSPAKAGASVRVHRGRRGFCLA*SSGYSV Trigger: CACAGAATAACCAGAAGACAATGCCAGGCAAAACCC...CCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAAGCATGGCTAGACTCTaGGCAAACAGGGCTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPAKAGASVRVHRGRRTSMARL*ANRAVF Trigger: GAACACAGCCCTGTTTGCCAAGAGTCTAGCCATGCT...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS GCA 90 bp | TCAGCAAGGAGGAAGAAGTCATTGTTGGCCTGTTCCTGGTGGAGCTaGTCAATCTTTTCTTCCACCTCAGCCAGTTGGGAGAGCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SARRKKSLLACSWWS*SIFSSTSASWESAR Trigger: TCGAGCGCTCTCCCAACTGGCTGAGGTGGAAGAAAAGATTGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAGTGGCTTCGGAGAATTaGTGGCTTCTTGCGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPRQGHQLGSIEEEGQCIVASEN*WLLAED Trigger: ATCCTCCGCAAGAAGCCACAAATTCTCCGAAGCCAC...TATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS GCA 90 bp | GTAGCTTTGTTGAACATCTTAAGGAGACCAGCGCCACTCAAAGCCTaGGTGCCCACAGCTCGAGGCAGCTCTTCTTTTTCCAGAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VALLNILRRPAPLKA*VPTARGSSSFSRNS Trigger: GGAGTTTCTGGAAAAAGAAGAGCTGCCTCGAGCTGTGGGCACGCAGGCTTTGAGTGGCGCTGGTCTCCTTAAGATGTTCAACAAAGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CTGTGGGGCAGAGTGGAAGGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGACTGCATCTGTAGCTTaGTTGAACATCTTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LWGRVEGLSPAKAGASVRTASVA*LNILRR Trigger: TCTCCTTAAGATGTTCAACAAAGCTACAGATGCAGT...CCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCCTTCCACTCTGCCCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | GGGCTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGTGGATCCCATTCTCTTaGGAACCATTTTTGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLSPAKAGASVRVHRGRRWIPFS*EPFLIG Trigger: TCCTATCAAAAATGGTTCCAAAGAGAATGGGATCCA...CCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 90 bp | GCGTGCCCACAGCTCGAGGCAGCTCTTCTTTTTCCAGAAACTCCCTaGCATCTGGGTCCTGTAACATGGTGGGATGATTCACAATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ACPQLEAALLFPETP*HLGPVTWWDDSQFF Trigger: AAAGAATTGTGAATCATCCCACCATGTTACAGGACCCAGATGTCAGGGAGTTTCTGGAAAAAGAAGAGCTGCCTCGAGCTGTGGGCACGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 90 bp | AAACTGATCCTCCTGTTCTTCCTCCAGCTCCTCATAGCTTGGCTGTaGCTTCGGAGAATTTGTGGCTTCTTGCGGAGGATGAGAAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLILLFFLQLLIAWL*LRRICGFLRRMRSK Trigger: CTTACTTCTCATCCTCCGCAAGAAGCCACAAATTCTCCGAAGCCACAGCCAAGCTATGAGGAGCTGGAGGAAGAACAGGAGGATCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGCATCTGTAGCTTTGTaGAACATCTTAAGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPAKAGASVRVHRGRRTASVAL*NILRRP Trigger: TGGTCTCCTTAAGATGTTCAACAAAGCTACAGATGC...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGCTTCTGCAGCGTGGCTaGAGCATCCTGCCAGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YINTPPQPIIPPPIVGLLLLQRG*SILPAL Trigger: CAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAAG...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 90 bp | TCCTTTCGGACAACTGTGGAAATCCTTTCAAAGTCCCTTTCATACTaGGTCACCCGAGATTCCCACTCTGTGATCTCATCCTTAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFRTTVEILSKSLSY*VTRDSHSVISSLAC Trigger: GCAGGCTAAGGATGAGATCACAGAGTGGGAATCTCGGGTGACTCAGTATGAAAGGGACTTTGAAAGGATTTCCACAGTTGTCCGAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CTAAGTCCAGCCAAGGCAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACATCTTTGGAACCATTTTaGATAGGAAAAAGGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSPAKAGASVRVHRGRRTSLEPF*IGKRDV Trigger: CACATCCCTTTTTCCTATCAAAAATGGTTCCAAAGA...TGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTGCCTTGGCTGGACTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | CAGGGGCATCAGTTAGGGTCCATCGAGGAAGAAGGACAGTGTATAAAAAGGCAGTCCCAACCTTCACCTTaGTCATTCCTATTAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGHQLGSIEEEGQCIKRQSQPSP*SFLLGS Trigger: AGAGCCTAATAGGAATGACAAAGGTGAAGGTTGGGA...CTGCCTTTTTATACACTGTCCTTCTTCCTCGATGGACCCTAACTGATGCCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGCGAGAAAGTGCTGTGTaGTCCTCGGAGCTCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YINTPPQPIIPPPIVGLLRESAV*SSELPS Trigger: GCTTGGGAGCTCCGAGGACAACACAGCACTTTCTCG...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | TATTTATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTAGTTTGTCAGGCTTGTaGGCCCACAGCAGCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YLYQHSTPTYNSTTYCRSSLSGL*AHSSRA Trigger: GGCACGGCTGCTGTGGGCCAACAAGCCTGACAAACT...AGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 90 bp | CCTTTGTCATTCCTATTAGGCTCTTCTCGGGTGGAGGAGGCACAATaGAACCATTCTGGGAGTGCTTCTCTGAAAGCTTCTCATAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSFLLGSSRVEEAQ*NHSGSASLKASHKD Trigger: GTCTTTATGAGAAGCTTTCAGAGAAGCACTCCCAGAATGGTTTCATTGTGCCTCCTCCACCCGAGAAGAGCCTAATAGGAATGACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS CCA 90 bp | AGTTCCACTGTGGCATCTGCAAAGAGATCCTGTGGCTCTTGGTCTTaGTCCTCATGGATCCCATTCTCTTTGGAACCATTTTTGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTVASAKRSCGSWS*SSWIPFSLEPFLIG Trigger: TCCTATCAAAAATGGTTCCAAAGAGAATGGGATCCATGAGGACCAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS-3UTR CAA 90 bp | TATTTATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTGCAGTTTGTCAGGCTaGTTGGCCCACAGCAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: YLYQHSTPTYNSTTYCRSCSLSG*LAHSSR Trigger: ACGGCTGCTGTGGGCCAACAAGCCTGACAAACTGCA...AGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 90 bp | GTGGCATCTGCAAAGAGATCCTGTGGCTCTTGGTCTTGGTCCTCATaGATCCCATTCTCTTTGGAACCATTTTTGATAGGAAAAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VASAKRSCGSWSWSS*IPFSLEPFLIGKRD Trigger: ATCCCTTTTTCCTATCAAAAATGGTTCCAAAGAGAATGGGATCCATGAGGACCAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS-3UTR CAA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGAGGAAGAAGTCATTGTaGGCCTGTTCCTGGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YINTPPQPIIPPPIVGLLRKKSL*ACSWWS Trigger: GCTCCACCAGGAACAGGCCAACAATGACTTCTTCCT...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGAGGAGGAAGAAGTCATaGTTGGCCTGTTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YINTPPQPIIPPPIVGLLRRKKS*LACSWW Trigger: CCACCAGGAACAGGCCAACAATGACTTCTTCCTCCT...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 90 bp | GCTGGGAATGTAGGAGTGTCTCCAGGTACTTCATCACGTGGTTTTTaGAATCCTTGGACTTCTCTTTCTCAAATCGTGTCACTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGNVGVSPGTSSRGF*NPWTSLSQIVSLPF Trigger: GAAAGGAAGTGACACGATTTGAGAAAGAGAAGTCCAAGGATTTCAAAAACCACGTGATGAAGTACCTGGAGACACTCCTACATTCCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | GGCACCATCAGGAGTAACAGAAAACGTTATTCCCAGTTCCTAAACCACATCCTGATGATTCACAATTCTTaGAAGGTACCTTTCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTIRSNRKRYSQFLNHILMIHNS*KVPFQS Trigger: GCTTTGGAAAGGTACCTTCAAAGAATTGTGAATCAT...CAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCTGATGGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | TATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTTGATCTTGATGGTCATTTaGCTGACTGCATCTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YINTPPQPIIPPPIVGLLILMVI*LTASVA Trigger: AGCTACAGATGCAGTCAGCAAAATGACCATCAAGAT...CAAAAGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | TATTTATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTAGTTCTTTCCTATGGTaGACTAGAGTCTCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: YLYQHSTPTYNSTTYCRSSSFLW*TRVSTT Trigger: TGTGGTGGAGACTCTAGTCAACCATAGGAAAGAACT...AGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS-3UTR CAA 90 bp | TATTTATATCAACACTCCACCCCAACCTATAATTCCACCACCTATTGTAGGTCTTTCATCACGTGGTTTTaGAAATCCTTGGACTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLYQHSTPTYNSTTYCRSFITWF*KSLDFS Trigger: AGAGAAGTCCAAGGATTTCAAAAACCACGTGATGAA...AGACCTACAATAGGTGGTGGAATTATAGGTTGGGGTGGAGTGTTGATATAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 90 bp | CCACAGCAGCCGTGCCTCAGACTCCCGCTTCTTCTGCAGCGTGGCTaGAGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQQPCLRLPLLLQRG*SILPALPCLHALVE Trigger: TTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAAGAAGCGGGAGTCTGAGGCACGGCTGCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 72 bp | CGTGCCTCAGACTCCCGCTTCTTCTGCAGCGTGGCTTaGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RASDSRFFCSVA*ASCQRCHVFMR Trigger: GCGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAAGAAGCGGGAGTCTGAGGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
||
| CDS CCA 72 bp | GCAGCCGTGCCTCAGACTCCCGCTTCTTCTGCAGCGTaGCTTGAGCATCCTGCCAGCGCTGCCATGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AAVPQTPASSAA*LEHPASAAMSS Trigger: TGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAAGAAGCGGGAGTCTGAGGCACGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | CCGTGCCTCAGACTCCCGCTTCTTCTGCAGCGTGGCTaGAGCATCCTGCCAGCGCTGCCATGTCTTCATGCG | + |
|
Preference number: 6 (lower is better) Translates to: PCLRLPLLLQRG*SILPALPCLHA Trigger: CGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCTGCAGAAGAAGCGGGAGTCTGAGGCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 90 bp | CACTCTGTGATCTCATCCTTAGCCTGCTGCAGTTTGTCAGGCTTGTaGGCCCACAGCAGCCGTGCCTCAGACTCCCGCTTCTTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HSVISSLACCSLSGL*AHSSRASDSRFFCS Trigger: GCTGCAGAAGAAGCGGGAGTCTGAGGCACGGCTGCTGTGGGCCAACAAGCCTGACAAACTGCAGCAGGCTAAGGATGAGATCACAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 90 bp | TCCCACTCTGTGATCTCATCCTTAGCCTGCTGCAGTTTGTCAGGCTaGTTGGCCCACAGCAGCCGTGCCTCAGACTCCCGCTTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SHSVISSLACCSLSG*LAHSSRASDSRFFC Trigger: GCAGAAGAAGCGGGAGTCTGAGGCACGGCTGCTGTGGGCCAACAAGCCTGACAAACTGCAGCAGGCTAAGGATGAGATCACAGAGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS GCA 72 bp | AGAGTCTCCACCACAGCATGCAGCTTCCGTAGGCGCTaGTCCTCACACTCTACCTCCTGGAGTTTCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RVSTTACSFRRR*SSHSTSWSFSS Trigger: CGAGGAGAAACTCCAGGAGGTAGAGTGTGAGGAGCAGCGCCTACGGAAGCTGCATGCTGTGGTGGAGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | ATCTCATCCTTAGCCTGCTGCAGTTTGTCAGGCTTGTaGGCCCACAGCAGCCGTGCCTCAGACTCCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ISSLACCSLSGL*AHSSRASDSRF Trigger: GAAGCGGGAGTCTGAGGCACGGCTGCTGTGGGCCAACAAGCCTGACAAACTGCAGCAGGCTAAGGATGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 90 bp | TCTTCCACCTCAGCCAGTTGGGAGAGCGCTCGAGAAAGTGCTGTGTaGTCCTCGGAGCTCCCAAGCATGGCTAGACTCTTGGCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSTSASWESARESAV*SSELPSMARLLANR Trigger: CCTGTTTGCCAAGAGTCTAGCCATGCTTGGGAGCTCCGAGGACAACACAGCACTTTCTCGAGCGCTCTCCCAACTGGCTGAGGTGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 90 bp | CTGTTCCTGGTGGAGCTGCTCAATCTTTTCTTCCACCTCAGCCAGTaGGGAGAGCGCTCGAGAAAGTGCTGTGTTGTCCTCGGAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LFLVELLNLFFHLSQ*GERSRKCCVVLGAP Trigger: GGGAGCTCCGAGGACAACACAGCACTTTCTCGAGCGCTCTCCCAACTGGCTGAGGTGGAAGAAAAGATTGAGCAGCTCCACCAGGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | TCAGCCAGTTGGGAGAGCGCTCGAGAAAGTGCTGTGTaGTCCTCGGAGCTCCCAAGCATGGCTAGACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SASWESARESAV*SSELPSMARLL Trigger: CAAGAGTCTAGCCATGCTTGGGAGCTCCGAGGACAACACAGCACTTTCTCGAGCGCTCTCCCAACTGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS GCA 72 bp | CGAGATTCCCACTCTGTGATCTCATCCTTAGCCTGCTaGAGTTTGTCAGGCTTGTTGGCCCACAGCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: RDSHSVISSLAC*SLSGLLAHSSR Trigger: ACGGCTGCTGTGGGCCAACAAGCCTGACAAACTGCAGCAGGCTAAGGATGAGATCACAGAGTGGGAATCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 72 bp | GAGAAAGTGCTGTGTTGTCCTCGGAGCTCCCAAGCATaGCTAGACTCTTGGCAAACAGGGCTGTGTTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: EKVLCCPRSSQA*LDSWQTGLCSA Trigger: CGCTGAACACAGCCCTGTTTGCCAAGAGTCTAGCCATGCTTGGGAGCTCCGAGGACAACACAGCACTTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 72 bp | TGTTGTCCTCGGAGCTCCCAAGCATGGCTAGACTCTTaGCAAACAGGGCTGTGTTCAGCGCTAGTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: CCPRSSQAWLDS*QTGLCSALVLS Trigger: GGAAAGAACTAGCGCTGAACACAGCCCTGTTTGCCAAGAGTCTAGCCATGCTTGGGAGCTCCGAGGACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CCA 72 bp | TGGAGCTGCTCAATCTTTTCTTCCACCTCAGCCAGTTaGGAGAGCGCTCGAGAAAGTGCTGTGTTGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: WSCSIFSSTSAS*ESARESAVLSS Trigger: CGAGGACAACACAGCACTTTCTCGAGCGCTCTCCCAACTGGCTGAGGTGGAAGAAAAGATTGAGCAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | GTGTTGTCCTCGGAGCTCCCAAGCATGGCTAGACTCTaGGCAAACAGGGCTGTGTTCAGCGCTAGTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VLSSELPSMARL*ANRAVFSASSF Trigger: GAAAGAACTAGCGCTGAACACAGCCCTGTTTGCCAAGAGTCTAGCCATGCTTGGGAGCTCCGAGGACAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | GTGGAGCTGCTCAATCTTTTCTTCCACCTCAGCCAGTaGGGAGAGCGCTCGAGAAAGTGCTGTGTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VELLNLFFHLSQ*GERSRKCCVVL Trigger: GAGGACAACACAGCACTTTCTCGAGCGCTCTCCCAACTGGCTGAGGTGGAAGAAAAGATTGAGCAGCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | ACTGATCCTCCTGTTCTTCCTCCAGCTCCTCATAGCTaGGCTGTGGCTTCGGAGAATTTGTGGCTTCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: TDPPVLPPAPHS*AVASENLWLLA Trigger: CGCAAGAAGCCACAAATTCTCCGAAGCCACAGCCAAGCTATGAGGAGCTGGAGGAAGAACAGGAGGATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS CAA 90 bp | GAAAGTGCTGTGTTGTCCTCGGAGCTCCCAAGCATGGCTAGACTCTaGGCAAACAGGGCTGTGTTCAGCGCTAGTTCTTTCCTATGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ESAVLSSELPSMARL*ANRAVFSASSFLWL Trigger: CAACCATAGGAAAGAACTAGCGCTGAACACAGCCCTGTTTGCCAAGAGTCTAGCCATGCTTGGGAGCTCCGAGGACAACACAGCACTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 72 bp | ACAGGGCTGTGTTCAGCGCTAGTTCTTTCCTATGGTTaGCTAGAGTCTCCACCACAGCATGCAGCTTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: TGLCSALVLSYG*LESPPQHAASV Trigger: TACGGAAGCTGCATGCTGTGGTGGAGACTCTAGTCAACCATAGGAAAGAACTAGCGCTGAACACAGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | CTGCGGAAGAAGAATCTTCCTTCCCAACCTTCACCTTaGTCATTCCTATTAGGCTCTTCTCGGGTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRKKNLPSQPSP*SFLLGSSRVEE Trigger: CTCCTCCACCCGAGAAGAGCCTAATAGGAATGACAAAGGTGAAGGTTGGGAAGGAAGATTCTTCTTCCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS CCA 72 bp | GTGGCATCTGCAAAGAGATCCTGTGGCTCTTGGTCTTaGTCCTCATGGATCCCATTCTCTTTGGAACCATTT | + |
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Preference number: 6 (lower is better) Translates to: VASAKRSCGSWS*SSWIPFSLEPF Trigger: AAATGGTTCCAAAGAGAATGGGATCCATGAGGACCAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS CAA 72 bp | TGTGGCATCTGCAAAGAGATCCTGTGGCTCTTGGTCTaGGTCCTCATGGATCCCATTCTCTTTGGAACCATT | + |
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Preference number: 6 (lower is better) Translates to: CGICKEILWLLV*VLMDPILFGTI Trigger: AATGGTTCCAAAGAGAATGGGATCCATGAGGACCAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS CCA 72 bp | GCAAAGAGATCCTGTGGCTCTTGGTCTTGGTCCTCATaGATCCCATTCTCTTTGGAACCATTTTTGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: AKRSCGSWSWSS*IPFSLEPFLIG Trigger: TCCTATCAAAAATGGTTCCAAAGAGAATGGGATCCATGAGGACCAAGACCAAGAGCCACAGGATCTCTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS CAA 72 bp | GGCTCTTGGTCTTGGTCCTCATGGATCCCATTCTCTTaGGAACCATTTTTGATAGGAAAAAGGGATGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: GSWSWSSWIPFS*EPFLIGKRDVV Trigger: AACCACATCCCTTTTTCCTATCAAAAATGGTTCCAAAGAGAATGGGATCCATGAGGACCAAGACCAAGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034946.15 ENSMUST00000137542.2 |
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| CDS CAA 90 bp | TGTAGGAGTGTCTCCAGGTACTTCATCACGTGGTTTTTGAAATCCTaGGACTTCTCTTTCTCAAATCGTGTCACTTCCTTTCGGACAACT | + |
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Preference number: 6 (lower is better) Translates to: CRSVSRYFITWFLKS*DFSFSNRVTSFRTT Trigger: AGTTGTCCGAAAGGAAGTGACACGATTTGAGAAAGAGAAGTCCAAGGATTTCAAAAACCACGTGATGAAGTACCTGGAGACACTCCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 90 bp | TGCTGGGAATGTAGGAGTGTCTCCAGGTACTTCATCACGTGGTTTTaGAAATCCTTGGACTTCTCTTTCTCAAATCGTGTCACTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CWECRSVSRYFITWF*KSLDFSFSNRVTSF Trigger: AAAGGAAGTGACACGATTTGAGAAAGAGAAGTCCAAGGATTTCAAAAACCACGTGATGAAGTACCTGGAGACACTCCTACATTCCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS TCA 72 bp | GTAGGAGTGTCTCCAGGTACTTCATCACGTGGTTTTTaGAATCCTTGGACTTCTCTTTCTCAAATCGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: VGVSPGTSSRGF*NPWTSLSQIVS Trigger: TGACACGATTTGAGAAAGAGAAGTCCAAGGATTTCAAAAACCACGTGATGAAGTACCTGGAGACACTCCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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| CDS CAA 72 bp | ATCTTGATGGTCATTTTGCTGACTGCATCTGTAGCTTaGTTGAACATCTTAAGGAGACCAGCGCCACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ILMVILLTASVA*LNILRRPAPLK Trigger: TTTGAGTGGCGCTGGTCTCCTTAAGATGTTCAACAAAGCTACAGATGCAGTCAGCAAAATGACCATCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034946.15 |
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