Pregenerated sensors for SNTG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020672Ensembl transcript IDs: ENSMUST00000021004.14, ENSMUST00000133324.8, ENSMUST00000142046.8, ENSMUST00000149710.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAACACGGGGTCCAGGGAGGCCACCTTGGCGGCAATGAAGGAGTaGATGCAGTGGAGGACCGCCGTCAAATCCTGGAACTCCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: MNTGSREATLAAMKE*MQWRTAVKSWNSSS Trigger: GGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTGGCCTCCCTGGACCCCGTGTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR GCA 90 bp | GTCCATTCAGGTGCAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTaGTGCTATGGTCACTGGATGGCCCTGGGGACCCTAATGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: VHSGAGHCQREAMRP*CYGHWMALGTLMAA Trigger: AGCTGCCATTAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCTGAATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR CCA 90 bp | GGGTCCAGGGAGGCCACCTTGGCGGCAATGAAGGAGTGGATGCAGTaGAGGACCGCCGTCAAATCCTGGAACTCCAGCTCCTTCGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: GSREATLAAMKEWMQ*RTAVKSWNSSSFVS Trigger: TGAAACGAAGGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTGGCCTCCCTGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR GCA 90 bp | CATTCAGGTGCAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTGCTaGTATGGTCACTGGATGGCCCTGGGGACCCTAATGGCAGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: HSGAGHCQREAMRPC*YGHWMALGTLMAAS Trigger: TGAAGCTGCCATTAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCTGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR CCA 90 bp | GGCCACTGTCAAAGAGAGGCGATGAGGCCCTGCTGCTATGGTCACTaGATGGCCCTGGGGACCCTAATGGCAGCTTCAGAAATGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: GHCQREAMRPCCYGH*MALGTLMAASEMRV Trigger: CACCCTCATTTCTGAAGCTGCCATTAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR GCA 90 bp | GAGGAAGGTGATGATGGAGCTGTGTGGCTGCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTGCTGCTATGG | + |
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Preference number: 1 (lower is better) Translates to: EEGDDGAVWLQCPFR*RPLSKRGDEALLLW Trigger: CCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCTGAATGGACACTGCAGCCACACAGCTCCATCATCACCTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR CCA 90 bp | AGGTGCAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTGCTGCTATaGTCACTGGATGGCCCTGGGGACCCTAATGGCAGCTTCAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: RCRPLSKRGDEALLL*SLDGPGDPNGSFRN Trigger: ATTTCTGAAGCTGCCATTAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR CCA 90 bp | GCCAGCTCACTGCCCAGCTCTACACTGAAGATGTGGCTCTTCCCATaGTTGGCCAGGACGCTGAAGCAGTATGACCTGGGGTCTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: ASSLPSSTLKMWLFP*LARTLKQYDLGSSQ Trigger: CTGTGAAGACCCCAGGTCATACTGCTTCAGCGTCCTGGCCAACCATGGGAAGAGCCACATCTTCAGTGTAGAGCTGGGCAGTGAGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR TCA 90 bp | GAGATTGAACGCAACCAGTCAGCACAGTCCTGGGCAGTGGAGAATTaGAGGACTCCTGTGCTGGCTCCATCCAGGGCCAGCACCTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: EIERNQSAQSWAVEN*RTPVLAPSRASTSN Trigger: ATTGGAGGTGCTGGCCCTGGATGGAGCCAGCACAGGAGTCCTTCAATTCTCCACTGCCCAGGACTGTGCTGACTGGTTGCGTTCAATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR TCA 90 bp | GCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCTGAACTTCCATaGAAGTTGCTCTTTGGAATGCCTTCTCCCACACGGCCAGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: ASCTDMFWTRFSELP*KLLFGMPSPTRPAH Trigger: GTGAGCTGGCCGTGTGGGAGAAGGCATTCCAAAGAGCAACTTTCATGGAAGTTCAGAGAACCGGGTCCAAAACATATCTGTGCAGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR GCA 90 bp | TTTGGACCCGGTTCTCTGAACTTCCATGAAAGTTGCTCTTTGGAATaGCTTCTCCCACACGGCCAGCTCACTGCCCAGCTCTACACTGAA | + |
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Preference number: 1 (lower is better) Translates to: FGPGSLNFHESCSLE*LLPHGQLTAQLYTE Trigger: TTCAGTGTAGAGCTGGGCAGTGAGCTGGCCGTGTGGGAGAAGGCATTCCAAAGAGCAACTTTCATGGAAGTTCAGAGAACCGGGTCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR GCA 90 bp | CTTGTGAACTTTAAACAGCACCTCACAGAGGTTATAGGCACGTTCTaGTCGTCCCCAGTCCAGTGTGCTTACCGGAGGAGCGCCAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: LVNFKQHLTEVIGTF*SSPVQCAYRRSAKN Trigger: ATTTTTGGCGCTCCTCCGGTAAGCACACTGGACTGGGGACGAGCAGAACGTGCCTATAACCTCTGTGAGGTGCTGTTTAAAGTTCACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR CCA 90 bp | GGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTaGGTTTCATTGATGCAAGCAGTAGACTGCGGCGTTACATCACCA | + |
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Preference number: 1 (lower is better) Translates to: GDFSLSYLALCKNKI*VSLMQAVDCGVTSP Trigger: TGGTGATGTAACGCCGCAGTCTACTGCTTGCATCAATGAAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
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| 3UTR TCA 90 bp | ATCTTGGAGACCAAGATACAGGTTTGCCTGCAGCCAATAGTTATCTaGAAGCCAGAACTTGTGAACTTTAAACAGCACCTCACAGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: ILETKIQVCLQPIVI*KPELVNFKQHLTEV Trigger: AACCTCTGTGAGGTGCTGTTTAAAGTTCACAAGTTCTGGCTTTCAGATAACTATTGGCTGCAGGCAAACCTGTATCTTGGTCTCCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR TCA 90 bp | ACTGTGCCTGGTCAGATTGATACCCTATTGTCACATTCAACAGTCTaGCCCATCTGTGAAACTAGTGATGTCTTTATTGGTATCACAACT | + |
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Preference number: 1 (lower is better) Translates to: TVPGQIDTLLSHSTV*PICETSDVFIGITT Trigger: AGTTGTGATACCAATAAAGACATCACTAGTTTCACAGATGGGTCAGACTGTTGAATGTGACAATAGGGTATCAATCTGACCAGGCACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCTCACTGCCCAGCTCTACACTGAAGATGTGGCTCTTCCCATGGTTGGCGAGGCCCTGCTGCTATaGTCACTGGATGGCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GQLTAQLYTEDVALPMVGEALLL*SLDGPG Trigger: CCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTC...GCCAACCATGGGAAGAGCCACATCTTCAGTGTAGAGCTGGGCAGTGAGCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGGAGGCCCTGCTGCTATaGTCACTGGATGGCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: HLGGNEGVDAVEDRRQILEALLL*SLDGPG Trigger: CCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTC...CAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR CAA 90 bp | GCCATACTCTGGCTATCCATGAACACGGGGTCCAGGGAGGCCACCTaGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: AILWLSMNTGSREAT*AAMKEWMQWRTAVK Trigger: TTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTGGCCTCCCTGGACCCCGTGTTCATGGATAGCCAGAGTATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR GCA 90 bp | ACCGTGAAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGCGATGAGGCCCTGCTaGTATGGTCACTGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: TVKHSVSPCQLHRYVLDPAMRPC*YGHWMA Trigger: GGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGC...CGGGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTTCACGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGAATCCCAGAGCAAAATCCACCGTGAAGCACAGCGTCTCCCCTTGCCAGGAAGGACTCCTGTGCTaGCTCCATCCAGGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QVNPRAKSTVKHSVSPCQEGLLC*LHPGPA Trigger: TGCTGGCCCTGGATGGAGCCAGCACAGGAGTCCTTC...CTGGCAAGGGGAGACGCTGTGCTTCACGGTGGATTTTGCTCTGGGATTCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGCACAGCGTCTCCCCTTaGCAGCTGCACAGATATGTT | + |
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Preference number: 2 (lower is better) Translates to: HLGGNEGVDAVEDRRQILHSVSP*QLHRYV Trigger: AACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTG...CAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR CCA 90 bp | ACCGTGAAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGACCCGATGTGGCTCTTCCCATaGTTGGCCAGGACGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TVKHSVSPCQLHRYVLDPMWLFP*LARTLK Trigger: CTTCAGCGTCCTGGCCAACCATGGGAAGAGCCACAT...CGGGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTTCACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR CAA 90 bp | AGCTCACTGCCCAGCTCTACACTGAAGATGTGGCTCTTCCCATGGTaGGCCAGGACGCTGAAGCAGTATGACCTGGGGTCTTCACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SSLPSSTLKMWLFPW*ARTLKQYDLGSSQS Trigger: TGACTGTGAAGACCCCAGGTCATACTGCTTCAGCGTCCTGGCCAACCATGGGAAGAGCCACATCTTCAGTGTAGAGCTGGGCAGTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCTGAACTTCGAGGCGATGAGGCCCTaGTGCTATGGTCACTGGATG | + |
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Preference number: 2 (lower is better) Translates to: RLPLPAAQICFGPGSLNFEAMRP*CYGHWM Trigger: CATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTC...GAAGTTCAGAGAACCGGGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGTCTACACTGAAGATGTaGCTCTTCCCATGGTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HLGGNEGVDAVEDRRQILSTLKM*LFPWLA Trigger: GGCCAACCATGGGAAGAGCCACATCTTCAGTGTAGA...CAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCATGGAGCTGTGTGGCTaGAGTGTCCATTCAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: KHSVSPCQLHRYVLDPVLMELCG*SVHSGA Trigger: TGCACCTGAATGGACACTGCAGCCACACAGCTCCAT...GAGAACCGGGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR CAA 90 bp | GCCAGCACCTCCAATGCACTGGACCTGAGCTTTTCTGTTCCAGCTTaGTATCTGGAGATCCGAGCCATAGACAGAGGGACTGACAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ASTSNALDLSFSVPA*YLEIRAIDRGTDKV Trigger: CACCTTGTCAGTCCCTCTGTCTATGGCTCGGATCTCCAGATACAAAGCTGGAACAGAAAAGCTCAGGTCCAGTGCATTGGAGGTGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGGACCGCCGTCAAATCCTGGAACTCCAGCTCCTTCGTTTCAATCTGCTTTGCCCAGCTCTACACTaGAGATGTGGCTCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: VEDRRQILELQLLRFNLLCPALH*RCGSSH Trigger: ATGGGAAGAGCCACATCTTCAGTGTAGAGCTGGGCA...AAGCAGATTGAAACGAAGGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KHSVSPCQLHRYVLDPVLQCPFR*RPLSKR Trigger: TCTCTTTGACAGTGGCCTGCACCTGAATGGACACTG...GAGAACCGGGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTGCCATACTCTGGCTATCCATGAACACGGGGTCCAGGGAGGCCACCTTGGTACAGCATCTCCTATaGACAACATCTCTGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LLAILWLSMNTGSREATLVQHLL*TTSLSG Trigger: ACCAGACAGAGATGTTGTTCATAGGAGATGCTGTAC...CAAGGTGGCCTCCCTGGACCCCGTGTTCATGGATAGCCAGAGTATGGCAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCTGAACTTCCATGAAGACGCTGAAGCAGTATaGCCTGGGGTCTTCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: PLPAAQICFGPGSLNFHEDAEAV*PGVFTV Trigger: GACTGTGAAGACCCCAGGTCATACTGCTTCAGCGTC...TTCATGGAAGTTCAGAGAACCGGGTCCAAAACATATCTGTGCAGCTGGCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCGATGAGGCCCTGCTGCTATGGTCACTGGATGGCCCTGGGGACCCTAATAAAACCACACAAAGGTaGAACATTGTGCAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RGDEALLLWSLDGPGDPNKTTQR*NIVQER Trigger: TCTTTCCTGCACAATGTTGCACCTTTGTGTGGTTTT...ATTAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAGGTGAATCCCAGAGCAAAATCCACCGTGAAGCACAGCGTCTCCCCTTGCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KAGESQSKIHREAQRLPLQCPFR*RPLSKR Trigger: TCTCTTTGACAGTGGCCTGCACCTGAATGGACACTG...CAAGGGGAGACGCTGTGCTTCACGGTGGATTTTGCTCTGGGATTCACCTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTATCTTCTTGCCATACTCTGGCTATCCATGAACACGGGGTCCAGGGAGGCGTACAGCATCTCCTATaGACAACATCTCTGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QVSSCHTLAIHEHGVQGGVQHLL*TTSLSG Trigger: ACCAGACAGAGATGTTGTTCATAGGAGATGCTGTAC...GCCTCCCTGGACCCCGTGTTCATGGATAGCCAGAGTATGGCAAGAAGATACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGGAACTCCAGCTCCTTCAGCCAATAGTTATCTaGAAGCCAGAACTTGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: EGVDAVEDRRQILELQLLQPIVI*KPELVN Trigger: GTTCACAAGTTCTGGCTTTCAGATAACTATTGGCTG...AAGGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTAAGCTGAGAGAACTTGAATCTCCAGAGTACGTTCTTTGTCTTACCGTCGCGATGAGGCCCTGCTaGTATGGTCACTGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: SLKLRELESPEYVLCLTVAMRPC*YGHWMA Trigger: GGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGC...GACGGTAAGACAAAGAACGTACTCTGGAGATTCAAGTTCTCTCAGCTTAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133324.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGGAACTCCAGCTCCTTACCAAGATACAGGTTTaGCTGCAGCCAATAGTTATC | + |
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Preference number: 2 (lower is better) Translates to: EGVDAVEDRRQILELQLLTKIQV*LQPIVI Trigger: GATAACTATTGGCTGCAGGCAAACCTGTATCTTGGT...AAGGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGTTGGTGTCCAGATTCTaGAACAGCAGCTTTACTCGA | + |
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Preference number: 2 (lower is better) Translates to: AALHHQLFETGWDGIVSELVSRF*NSSFTR Trigger: TCGAGTAAAGCTGCTGTTTCAGAATCTGGACACCAA...CTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142046.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAGGTGAATCCCAGAGCAAAATCCACCGTGAAGCACAGCGTCTCCCCTTGGCGTTTCTCAGAAGATaGACCACTTCTTCATGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KAGESQSKIHREAQRLPLAFLRR*TTSSWV Trigger: AACCCATGAAGAAGTGGTGCATCTTCTGAGAAACGC...CAAGGGGAGACGCTGTGCTTCACGGTGGATTTTGCTCTGGGATTCACCTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTCTGAAACAGCAGCTTTACTCGAGTCTTCCCATCATCTGAGGATCCCTAGTTGCTCTTTGGAATaGCTTCTCCCACACGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PDSETAALLESSHHLRIPSCSLE*LLPHGQ Trigger: CTGGCCGTGTGGGAGAAGGCATTCCAAAGAGCAACT...AGGGATCCTCAGATGATGGGAAGACTCGAGTAAAGCTGCTGTTTCAGAATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTCTGAAACAGCAGCTTTACTCGAGTCTTCCCATCATCTGAGGATCCCTCACAGCGTCTCCCCTTaGCAGCTGCACAGATATGTT | + |
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Preference number: 2 (lower is better) Translates to: PDSETAALLESSHHLRIPHSVSP*QLHRYV Trigger: AACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTG...AGGGATCCTCAGATGATGGGAAGACTCGAGTAAAGCTGCTGTTTCAGAATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCACACGGCCAGCTCACTGCCCAGCTCTACACTGAAGATGTGGCTCTTCTGCACCACTTCTTCATaGGTTGCGTTTTCTACATTA | + |
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Preference number: 2 (lower is better) Translates to: FSHTASSLPSSTLKMWLFCTTSS*VAFSTL Trigger: TAATGTAGAAAACGCAACCCATGAAGAAGTGGTGCA...GAAGAGCCACATCTTCAGTGTAGAGCTGGGCAGTGAGCTGGCCGTGTGGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGGTCCTACCTGGCACTTTaGAAAAATAAAATTTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: TLAAMKEWMQWRTAVKSWSYLAL*KNKIWV Trigger: AACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGA...CCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142046.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTAGCTGCTGCACAGGTATCTTCTTGCCATACTCTGGCTATCCATGAACACCACAGTCCTGGGCAGTaGAGAATTGAAGGACTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VLAAAQVSSCHTLAIHEHHSPGQ*RIEGLL Trigger: CAGGAGTCCTTCAATTCTCCACTGCCCAGGACTGTG...GTGTTCATGGATAGCCAGAGTATGGCAAGAAGATACCTGTGCAGCAGCTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTTTGTCTTACCGTCAAAGCAGGTGAATCCCAGAGCAAAATCCACCGTGAATGGCAGCTTCAGAAATaGGGGTGCTTCCCTGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: VLCLTVKAGESQSKIHREWQLQK*GCFPEI Trigger: TATCTCAGGGAAGCACCCTCATTTCTGAAGCTGCCA...TTCACGGTGGATTTTGCTCTGGGATTCACCTGCTTTGACGGTAAGACAAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133324.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCCACCGTGAAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGAAAAACCACACAAAGGTaGAACATTGTGCAGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IHREAQRLPLPAAQICFGKTTQR*NIVQER Trigger: TCTTTCCTGCACAATGTTGCACCTTTGTGTGGTTTT...TCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTTCACGGTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTTAAGCTGAGAGAACTTGAATCTCCAGAGTACGTTCTTTGTCTTACCGTCATGGAGCTGTGTGGCTaGAGTGTCCATTCAGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLKLRELESPEYVLCLTVMELCG*SVHSGA Trigger: TGCACCTGAATGGACACTGCAGCCACACAGCTCCAT...GACGGTAAGACAAAGAACGTACTCTGGAGATTCAAGTTCTCTCAGCTTAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133324.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGATCCGAGCCATAGACAGAGGGACTGACAAGGTGTCTAGCCAACGCTTCTCATGCACCACTTCTTCATaGGTTGCGTTTTCTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: EIRAIDRGTDKVSSQRFSCTTSS*VAFSTL Trigger: TAATGTAGAAAACGCAACCCATGAAGAAGTGGTGCA...TGAGAAGCGTTGGCTAGACACCTTGTCAGTCCCTCTGTCTATGGCTCGGATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATTCTGAAACAGCAGCTTTACTCGAGTCTTCCCATCATCTGAGGATCCCTGAGTTGTCAGCTCCTTaGAGCCTCTCATTTACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: PDSETAALLESSHHLRIPELSAP*SLSFTH Trigger: ATGGGTAAATGAGAGGCTCCAAGGAGCTGACAACTC...AGGGATCCTCAGATGATGGGAAGACTCGAGTAAAGCTGCTGTTTCAGAATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAAATTCCCTCTTCACTCTATTCATTTATCACCCTGTTCACTTTACAGCCCGAGGCGATGAGGCCCTaGTGCTATGGTCACTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: IQIPSSLYSFITLFTLQPEAMRP*CYGHWM Trigger: CATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTC...GGGCTGTAAAGTGAACAGGGTGATAAATGAATAGAGTGAAGAGGGAATTTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142046.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACTTGTTTTAGCTGCTGCACAGGTATCTTCTTGCCATACTCTGGCTATCCATTGGCAGCTTCAGAAATaGGGGTGCTTCCCTGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: KLVLAAAQVSSCHTLAIHWQLQK*GCFPEI Trigger: TATCTCAGGGAAGCACCCTCATTTCTGAAGCTGCCA...ATGGATAGCCAGAGTATGGCAAGAAGATACCTGTGCAGCAGCTAAAACAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTTTGTCTTACCGTCAAAGCAGGTGAATCCCAGAGCAAAATCCACCGTGAAGAAAGCCAGAACTTGTaGACTTTAAACAGCACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VLCLTVKAGESQSKIHREESQNL*TLNSTS Trigger: TGAGGTGCTGTTTAAAGTTCACAAGTTCTGGCTTTC...TTCACGGTGGATTTTGCTCTGGGATTCACCTGCTTTGACGGTAAGACAAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000149710.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAAATTCCCTCTTCACTCTATTCATTTATCACCCTGTTCACTTTACAGCCCTGCTGGTCCCACCCATaGCAAAGGGAGAGTTACCAA | + |
|
Preference number: 2 (lower is better) Translates to: IQIPSSLYSFITLFTLQPCWSHP*QRESYQ Trigger: TTGGTAACTCTCCCTTTGCCATGGGTGGGACCAGCA...GGGCTGTAAAGTGAACAGGGTGATAAATGAATAGAGTGAAGAGGGAATTTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTCTCACTCTCCTACCTaGCACTTTGCAAAAATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QRESYQLACGKPISLKKGSHSPT*HFAKIK Trigger: TTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGA...CCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTCCTACCTGGCACTTTaGAAAAATAAAATTTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: QRESYQLACGKPISLKKGSYLAL*KNKIWV Trigger: AACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGA...CCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACTTGTTTTAGCTGCTGCACAGGTATCTTCTTGCCATACTCTGGCTATCCATTCTCACTCTCCTACCTaGCACTTTGCAAAAATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KLVLAAAQVSSCHTLAIHSHSPT*HFAKIK Trigger: TTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGA...ATGGATAGCCAGAGTATGGCAAGAAGATACCTGTGCAGCAGCTAAAACAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142046.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTAAAACCACACAAAGGTaGAACATTGTGCAGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFKTTQR*NIVQER Trigger: TCTTTCCTGCACAATGTTGCACCTTTGTGTGGTTTT...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTAACTTCCATGAAAGTTaGTCTTTGGAATGCCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFNFHES*SLECLL Trigger: GAGAAGGCATTCCAAAGAGCAACTTTCATGGAAGTT...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142046.8 |
||
| 3UTR GCA 72 bp | GGTGCAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTaGTGCTATGGTCACTGGATGGCCCTGGGGACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GAGHCQREAMRP*CYGHWMALGTL Trigger: TAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR CCA 72 bp | GGGTCCAGGGAGGCCACCTTGGCGGCAATGAAGGAGTaGATGCAGTGGAGGACCGCCGTCAAATCCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSREATLAAMKE*MQWRTAVKSWN Trigger: GTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTGGCCTCCCTGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR GCA 72 bp | GCAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTGCTaGTATGGTCACTGGATGGCCCTGGGGACCCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: AGHCQREAMRPC*YGHWMALGTLM Trigger: CATTAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR CCA 72 bp | CCACTGTCAAAGAGAGGCGATGAGGCCCTGCTGCTATaGTCACTGGATGGCCCTGGGGACCCTAATGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLSKRGDEALLL*SLDGPGDPNGS Trigger: GCTGCCATTAGGGTCCCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR CCA 72 bp | GAGGCCACCTTGGCGGCAATGAAGGAGTGGATGCAGTaGAGGACCGCCGTCAAATCCTGGAACTCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: EATLAAMKEWMQ*RTAVKSWNSSS Trigger: GGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR TCA 72 bp | TCCATTCAGGTGCAGGCCACTGTCAAAGAGAGGCGATaGGGCCCTGCTGCTATGGTCACTGGATGGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SIQVQATVKERR*GPAAMVTGWPW Trigger: CCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCTGAATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR GCA 72 bp | CACAGTCCTGGGCAGTGGAGAATTGAAGGACTCCTGTaGTGGCTCCATCCAGGGCCAGCACCTCCAATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HSPGQWRIEGLL*WLHPGPAPPMH Trigger: GTGCATTGGAGGTGCTGGCCCTGGATGGAGCCAGCACAGGAGTCCTTCAATTCTCCACTGCCCAGGACTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGGCTCTTCCCATGGTTGGCCAGGACGCTGAAGCAGTATGACCTGGGGTCTCTGGGCAGTGGAGAATaGAAGGACTCCTGTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: MWLFPWLARTLKQYDLGSLGSGE*KDSCAG Trigger: GCCAGCACAGGAGTCCTTCAATTCTCCACTGCCCAG...AGACCCCAGGTCATACTGCTTCAGCGTCCTGGCCAACCATGGGAAGAGCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR GCA 72 bp | GATGATGGAGCTGTGTGGCTGCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: DDGAVWLQCPFR*RPLSKRGDEAL Trigger: CAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCTGAATGGACACTGCAGCCACACAGCTCCATCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR TCA 72 bp | CTCCATCCAGGGCCAGCACCTCCAATGCACTGGACCTaGGCTTTTCTGTTCCAGCTTTGTATCTGGAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LHPGPAPPMHWT*AFLFQLCIWRS Trigger: GGATCTCCAGATACAAAGCTGGAACAGAAAAGCTCAGGTCCAGTGCATTGGAGGTGCTGGCCCTGGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR GCA 72 bp | TTTAAACAGCACCTCACAGAGGTTATAGGCACGTTCTaGTCGTCCCCAGTCCAGTGTGCTTACCGGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FKQHLTEVIGTF*SSPVQCAYRRS Trigger: GCTCCTCCGGTAAGCACACTGGACTGGGGACGAGCAGAACGTGCCTATAACCTCTGTGAGGTGCTGTTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR GCA 72 bp | GGTTCTCTGAACTTCCATGAAAGTTGCTCTTTGGAATaGCTTCTCCCACACGGCCAGCTCACTGCCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSLNFHESCSLE*LLPHGQLTAQL Trigger: GAGCTGGGCAGTGAGCTGGCCGTGTGGGAGAAGGCATTCCAAAGAGCAACTTTCATGGAAGTTCAGAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR CCA 72 bp | AGATTGAACGCAACCAGTCAGCACAGTCCTGGGCAGTaGAGAATTGAAGGACTCCTGTGCTGGCTCCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLNATSQHSPGQ*RIEGLLCWLHP Trigger: TGGATGGAGCCAGCACAGGAGTCCTTCAATTCTCCACTGCCCAGGACTGTGCTGACTGGTTGCGTTCAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 |
||
| 3UTR CCA 72 bp | AAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTaGAACTCCAGCTCCTTCGTTTCAATCTGCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KEWMQWRTAVKS*NSSSFVSICLV Trigger: CACCAAGCAGATTGAAACGAAGGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCACCGTGAAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGATACATCACCAGCTGTTaGAGACAGGCTGGGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IHREAQRLPLPAAQICFGYITSC*RQAGMG Trigger: TCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTA...TCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTTCACGGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142046.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATTCTGAAACAGCAGCTTTACTCGAGTCTTCCCATCATCTGAGGATCCCTGCACAGCGTCTCCCCTaGCCAGCTGCACAGATATGT | + |
|
Preference number: 3 (lower is better) Translates to: PDSETAALLESSHHLRIPAQRLP*PAAQIC Trigger: ACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGC...AGGGATCCTCAGATGATGGGAAGACTCGAGTAAAGCTGCTGTTTCAGAATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCTGAACTTCCATGAATTCACAGTCAAAATCTaGGAGACCAAGATACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PLPAAQICFGPGSLNFHEFTVKI*ETKIQV Trigger: AACCTGTATCTTGGTCTCCAAGATTTTGACTGTGAA...TTCATGGAAGTTCAGAGAACCGGGTCCAAAACATATCTGTGCAGCTGGCAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR GCA 72 bp | ATAGTTTCAGAGGACCCTGAGTTCCTACCACCACTGTaGCTGGTCAGATTGATACCCTATTGTCACATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IVSEDPEFLPPL*LVRLIPYCHIQ Trigger: TTGAATGTGACAATAGGGTATCAATCTGACCAGGCACAGTGGTGGTAGGAACTCAGGGTCCTCTGAAACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| 3UTR GCA 72 bp | TATTCATTTATCACCCTGTTCACTTTACAGCCCAAATaGTGGTCCCACCCATGGCAAAGGGAGAGTTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: YSFITLFTLQPK*WSHPWQRESYQ Trigger: TTGGTAACTCTCCCTTTGCCATGGGTGGGACCAGCATTTGGGCTGTAAAGTGAACAGGGTGATAAATGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| 3UTR TCA 72 bp | GTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAATGGTaGCTTCTCACTCTCCTACCTGGCACTTTGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGSPFLLRKGKW*LLTLLPGTLQK Trigger: TTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCATTTACCCTTTCTTAAGAGAAATGGGCTTCCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| 3UTR GCA 72 bp | ATTGCTTGCAGCACTCTTCAAACTTGTTTTAGCTGCTaGACAGGTATCTTCTTGCCATACTCTGGCTATCCA | + |
|
Preference number: 3 (lower is better) Translates to: IACSTLQTCFSC*TGIFLPYSGYP Trigger: TGGATAGCCAGAGTATGGCAAGAAGATACCTGTGCAGCAGCTAAAACAAGTTTGAAGAGTGCTGCAAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR TCA 72 bp | ACCAAGATACAGGTTTGCCTGCAGCCAATAGTTATCTaGAAGCCAGAACTTGTGAACTTTAAACAGCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TKIQVCLQPIVI*KPELVNFKQHL Trigger: GAGGTGCTGTTTAAAGTTCACAAGTTCTGGCTTTCAGATAACTATTGGCTGCAGGCAAACCTGTATCTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR TCA 72 bp | CAGGGAGAACAGCATTTATTTGCCATTTTCATATGTTaGAGCGTCAGGTCACTGATGTTGGTTGAGATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QGEQHLFAIFIC*SVRSLMLVEIE Trigger: TTCAATCTCAACCAACATCAGTGACCTGACGCTTCAACATATGAAAATGGCAAATAAATGCTGTTCTCCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTTTCACAGTCAAAATCTaGGAGACCAAGATACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFFTVKI*ETKIQV Trigger: AACCTGTATCTTGGTCTCCAAGATTTTGACTGTGAA...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000142046.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCACACGGCCAGCTCACTGCCCAGCTCTACACTGAAGATGTGGCTCTTCGAAGGACTCCTGTGCTaGCTCCATCCAGGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSHTASSLPSSTLKMWLFEGLLC*LHPGPA Trigger: TGCTGGCCCTGGATGGAGCCAGCACAGGAGTCCTTC...GAAGAGCCACATCTTCAGTGTAGAGCTGGGCAGTGAGCTGGCCGTGTGGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR CCA 90 bp | GAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTACCACCACTGGAAGGACTCCTGTGCTaGCTCCATCCAGGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETGWDGIVSEDPEFLPPLEGLLC*LHPGPA Trigger: TGCTGGCCCTGGATGGAGCCAGCACAGGAGTCCTTC...CAGTGGTGGTAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | CTCCCACACGGCCAGCTCACTGCCCAGCTCTACACTGAAGATGTGGCTCTTCCCCACAGTCCTGGGCAGTaGAGAATTGAAGGACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPHGQLTAQLYTEDVALPHSPGQ*RIEGLL Trigger: CAGGAGTCCTTCAATTCTCCACTGCCCAGGACTGTG...GGGAAGAGCCACATCTTCAGTGTAGAGCTGGGCAGTGAGCTGGCCGTGTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR GCA 90 bp | GAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTACCACCACTGGAGGCGATGAGGCCCTaGTGCTATGGTCACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ETGWDGIVSEDPEFLPPLEAMRP*CYGHWM Trigger: CATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTC...CAGTGGTGGTAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTAGCGATGAGGCCCTGCTaGTATGGTCACTGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLFETGWDGIVSEDPEFLAMRPC*YGHWMA Trigger: GGCCATCCAGTGACCATAGCAGCAGGGCCTCATCGC...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTAGCGGCAATGAAGGAGTaGATGCAGTGGAGGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLFETGWDGIVSEDPEFLAAMKE*MQWRTA Trigger: GGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGC...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | CAGGTGAATCCCAGAGCAAAATCCACCGTGAAGCACAGCGTCTCCCCTTGCCAGATGCACTGGACTGTGTaGCTGCAGTGTCCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVNPRAKSTVKHSVSPCQMHWTV*LQCPFR Trigger: CCTGAATGGACACTGCAGCCACACAGTCCAGTGCAT...CTGGCAAGGGGAGACGCTGTGCTTCACGGTGGATTTTGCTCTGGGATTCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTACCACCTTGGCGGCAATaGAGGAGTGGATGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLFETGWDGIVSEDPEFLPPWRQ*RSGCSG Trigger: TCCACTGCATCCACTCCTTCATTGCCGCCAAGGTGG...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGGAGGCCCTGCTGCTATaGTCACTGGATGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRESYQLACGKPISLKKGEALLL*SLDGPG Trigger: CCCAGGGCCATCCAGTGACCATAGCAGCAGGGCCTC...CCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAATGTGGCTCTTCCCATaGTTGGCCAGGACGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAALHHQLFETGWDGIVSMWLFP*LARTLK Trigger: CTTCAGCGTCCTGGCCAACCATGGGAAGAGCCACAT...TGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | GAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTACCACCACTGTCTACACTGAAGATGTaGCTCTTCCCATGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETGWDGIVSEDPEFLPPLSTLKM*LFPWLA Trigger: GGCCAACCATGGGAAGAGCCACATCTTCAGTGTAGA...CAGTGGTGGTAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTAAAGGAGTGGATGCAGTaGAGGACCGCCGTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QLFETGWDGIVSEDPEFLKEWMQ*RTAVKS Trigger: GGATTTGACGGCGGTCCTCCACTGCATCCACTCCTT...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| 3UTR CAA 72 bp | GCTGGTCCCACCCATGGCAAAGGGAGAGTTACCAACTaGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPTHGKGRVTN*PVGSPFLLRKG Trigger: ACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCCTTTGCCATGGGTGGGACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGTGAATCCCAGAGCAAAATCCACCGTGAAGCACAGCGTCTCCCCTTGTGGCAGCTTCAGAAATaGGGGTGCTTCCCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KAGESQSKIHREAQRLPLWQLQK*GCFPEI Trigger: TATCTCAGGGAAGCACCCTCATTTCTGAAGCTGCCA...CAAGGGGAGACGCTGTGCTTCACGGTGGATTTTGCTCTGGGATTCACCTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTATGCCCAGCTCTACACTaGAGATGTGGCTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLFETGWDGIVSEDPEFLCPALH*RCGSSH Trigger: ATGGGAAGAGCCACATCTTCAGTGTAGAGCTGGGCA...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | GAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTACCACCACTGGAGGATCCCTTAAGCTaGGAGAACTTGAATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETGWDGIVSEDPEFLPPLEDPLS*ENLNLQ Trigger: CTGGAGATTCAAGTTCTCTCAGCTTAAGGGATCCTC...CAGTGGTGGTAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | GCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AALHHQLFETGWDGIVSEQCPFR*RPLSKR Trigger: TCTCTTTGACAGTGGCCTGCACCTGAATGGACACTG...CTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTAAGTTGCTCTTTGGAATaGCTTCTCCCACACGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLFETGWDGIVSEDPEFLSCSLE*LLPHGQ Trigger: CTGGCCGTGTGGGAGAAGGCATTCCAAAGAGCAACT...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGATGATGGAGCTGTGTaGCTGCAGTGTCCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAALHHQLFETGWDGIVSDDGAV*LQCPFR Trigger: CCTGAATGGACACTGCAGCCACACAGCTCCATCATC...TGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | GAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTACCACCACTGGTACAGCATCTCCTATaGACAACATCTCTGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETGWDGIVSEDPEFLPPLVQHLL*TTSLSG Trigger: ACCAGACAGAGATGTTGTTCATAGGAGATGCTGTAC...CAGTGGTGGTAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTGGAATGCCTTCTCCCACACGGCCAGCTCACTGCCCAGCTCTACACTGCTCTGTCTGGTCAGCTaGTTGGTCTTTGAATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALWNAFSHTASSLPSSTLLCLVS*LVFEYF Trigger: AAAATATTCAAAGACCAAGCAGCTGACCAGACAGAG...CAGTGTAGAGCTGGGCAGTGAGCTGGCCGTGTGGGAGAAGGCATTCCAAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR GCA 90 bp | GAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTACCACCACTGGCGTTTCTCAGAAGATaGACCACTTCTTCATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETGWDGIVSEDPEFLPPLAFLRR*TTSSWV Trigger: AACCCATGAAGAAGTGGTGCATCTTCTGAGAAACGC...CAGTGGTGGTAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | GGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAAGAGCAAAATCCACCGTaGAGCACAGCGTCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRVTNLPVGSPFLLRKGKEQNPP*STASPL Trigger: AAGGGGAGACGCTGTGCTTCACGGTGGATTTTGCTC...TTTACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | ACTGCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCATACCGTCAAAGCAGGTaGATCCCAGAGCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAALHHQLFETGWDGIVSYRQSR*IPEQNP Trigger: TGGATTTTGCTCTGGGATTCACCTGCTTTGACGGTA...TGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | GGATCCCTTAAGCTGAGAGAACTTGAATCTCCAGAGTACGTTCTTTGTCTTACCGAGGCGATGAGGCCCTaGTGCTATGGTCACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSLKLRELESPEYVLCLTEAMRP*CYGHWM Trigger: CATCCAGTGACCATAGCAGCAGGGCCTCATCGCCTC...GGTAAGACAAAGAACGTACTCTGGAGATTCAAGTTCTCTCAGCTTAAGGGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCTCTGAACTTCCATGAAAGTTGCTCTTTGGAATGCCTTCTCCCACACGGCCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLNFHESCSLECLLPHGQCPFR*RPLSKR Trigger: TCTCTTTGACAGTGGCCTGCACCTGAATGGACACTG...GCCGTGTGGGAGAAGGCATTCCAAAGAGCAACTTTCATGGAAGTTCAGAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR GCA 90 bp | ATTTACCCATCCCATGTGCACCACCTGGTCACAGGGAGAACAGCATTTATTTGCACTGGACTGTGTGGCTaGAGTGTCCATTCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYPSHVHHLVTGRTAFICTGLCG*SVHSGA Trigger: TGCACCTGAATGGACACTGCAGCCACACAGTCCAGT...GCAAATAAATGCTGTTCTCCCTGTGACCAGGTGGTGCACATGGGATGGGTAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTGGCAGCTTCAGAAATaGGGGTGCTTCCCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QRESYQLACGKPISLKKGWQLQK*GCFPEI Trigger: TATCTCAGGGAAGCACCCTCATTTCTGAAGCTGCCA...CCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAACACAGTCCTGGGCAGTaGAGAATTGAAGGACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVTNLPVGSPFLLRKGKHSPGQ*RIEGLL Trigger: CAGGAGTCCTTCAATTCTCCACTGCCCAGGACTGTG...TTTACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | ACCCCTCAGGGCCAAGAACTTGGGTCTGAAGTTCTGAGAGTTGTCAGCTCCTTGACGACATCTTGCTTTTaGATAGTCAGCACCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPQGQELGSEVLRVVSSLTTSCF*IVSTSF Trigger: AAAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGT...CAAGGAGCTGACAACTCTCAGAACTTCAGACCCAAGTTCTTGGCCCTGAGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAACCAAGATACAGGTTTaGCTGCAGCCAATAGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TAALHHQLFETGWDGIVSTKIQV*LQPIVI Trigger: GATAACTATTGGCTGCAGGCAAACCTGTATCTTGGT...TGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | ACTGCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAACGACATCTTGCTTTTaGATAGTCAGCACCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAALHHQLFETGWDGIVSTTSCF*IVSTSF Trigger: AAAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGT...TGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAACAGCACCTCACAGAGGTTATAGGCACGTTCTGCTCGTCCCCAGTCCAGACGACATCTTGCTTTTaGATAGTCAGCACCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKQHLTEVIGTFCSSPVQTTSCF*IVSTSF Trigger: AAAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGT...CTGGACTGGGGACGAGCAGAACGTGCCTATAACCTCTGTGAGGTGCTGTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCATTCTCTGAACTTCCATaGAAGTTGCTCTTTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: TAALHHQLFETGWDGIVSFSELP*KLLFGM Trigger: CATTCCAAAGAGCAACTTTCATGGAAGTTCAGAGAA...TGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | ATTTACCCATCCCATGTGCACCACCTGGTCACAGGGAGAACAGCATTTATTTGCGCGTTTCTCAGAAGATaGACCACTTCTTCATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IYPSHVHHLVTGRTAFICAFLRR*TTSSWV Trigger: AACCCATGAAGAAGTGGTGCATCTTCTGAGAAACGC...GCAAATAAATGCTGTTCTCCCTGTGACCAGGTGGTGCACATGGGATGGGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTAAACTTCCATGAAAGTTaGTCTTTGGAATGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLFETGWDGIVSEDPEFLNFHES*SLECLL Trigger: GAGAAGGCATTCCAAAGAGCAACTTTCATGGAAGTT...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAAGAGTTGTCAGCTCCTTaGAGCCTCTCATTTACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRVTNLPVGSPFLLRKGKELSAP*SLSFTH Trigger: ATGGGTAAATGAGAGGCTCCAAGGAGCTGACAACTC...TTTACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | ATTCAAATTCCCTCTTCACTCTATTCATTTATCACCCTGTTCACTTTACAGCCCGACGCTGAAGCAGTATaGCCTGGGGTCTTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQIPSSLYSFITLFTLQPDAEAV*PGVFTV Trigger: GACTGTGAAGACCCCAGGTCATACTGCTTCAGCGTC...GGGCTGTAAAGTGAACAGGGTGATAAATGAATAGAGTGAAGAGGGAATTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAAGCACAGGTATCTTCTTaGCATACTCTGGCTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRVTNLPVGSPFLLRKGKAQVSS*HTLAIH Trigger: ATGGATAGCCAGAGTATGGCAAGAAGATACCTGTGC...TTTACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | ATTCAAATTCCCTCTTCACTCTATTCATTTATCACCCTGTTCACTTTACAGCCCATGGAGCTGTGTGGCTaGAGTGTCCATTCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQIPSSLYSFITLFTLQPMELCG*SVHSGA Trigger: TGCACCTGAATGGACACTGCAGCCACACAGCTCCAT...GGGCTGTAAAGTGAACAGGGTGATAAATGAATAGAGTGAAGAGGGAATTTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTCACAGCGTCTCCCCTTaGCAGCTGCACAGATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFHSVSP*QLHRYV Trigger: AACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTG...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTTCTCCCCTTGCCAGCTaGACAGATATGTTTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFSPLAS*TDMFWT Trigger: GGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGA...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| 3UTR CAA 72 bp | CTTCACAGTCAAAATCTTGGAGACCAAGATACAGGTTaGCCTGCAGCCAATAGTTATCTGAAAGCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LHSQNLGDQDTG*PAANSYLKART Trigger: AGTTCTGGCTTTCAGATAACTATTGGCTGCAGGCAAACCTGTATCTTGGTCTCCAAGATTTTGACTGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAAGCTGAGAGAACTTGAATCTCCAGAGTACGTTCTTTGTCTTACCGTCACGACATCTTGCTTTTaGATAGTCAGCACCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLKLRELESPEYVLCLTVTTSCF*IVSTSF Trigger: AAAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGT...GACGGTAAGACAAAGAACGTACTCTGGAGATTCAAGTTCTCTCAGCTTAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133324.8 ENSMUST00000149710.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTTAGCTGCTGCACAGGTATCTTCTTGCCATACTCTGGCTATCCATGAAGTCTGGTCAGCTGCTTaGTCTTTGAATATTTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLAAAQVSSCHTLAIHEVWSAA*SLNILD Trigger: ATCTAAAATATTCAAAGACCAAGCAGCTGACCAGAC...TTCATGGATAGCCAGAGTATGGCAAGAAGATACCTGTGCAGCAGCTAAAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTATGAAAGTTGCTCTTTaGAATGCCTTCTCCCACACG | + |
|
Preference number: 4 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFMKVAL*NAFSHT Trigger: CGTGTGGGAGAAGGCATTCCAAAGAGCAACTTTCAT...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTGAAAGCCAGAACTTGTaGACTTTAAACAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFESQNL*TLNSTS Trigger: TGAGGTGCTGTTTAAAGTTCACAAGTTCTGGCTTTC...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR TCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTCAGCCAATAGTTATCTaGAAGCCAGAACTTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFQPIVI*KPELVN Trigger: GTTCACAAGTTCTGGCTTTCAGATAACTATTGGCTG...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTCTCTGTCTGGTCAGCTaGTTGGTCTTTGAATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFLCLVS*LVFEYF Trigger: AAAATATTCAAAGACCAAGCAGCTGACCAGACAGAG...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | ATTCAAATTCCCTCTTCACTCTATTCATTTATCACCCTGTTCACTTTACAGCCCTGCACCACTTCTTCATaGGTTGCGTTTTCTACATTA | + |
|
Preference number: 4 (lower is better) Translates to: IQIPSSLYSFITLFTLQPCTTSS*VAFSTL Trigger: TAATGTAGAAAACGCAACCCATGAAGAAGTGGTGCA...GGGCTGTAAAGTGAACAGGGTGATAAATGAATAGAGTGAAGAGGGAATTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS-3UTR CCA 90 bp | ATTCAAATTCCCTCTTCACTCTATTCATTTATCACCCTGTTCACTTTACAGCCCGTCTGGTCAGCTGCTTaGTCTTTGAATATTTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQIPSSLYSFITLFTLQPVWSAA*SLNILD Trigger: ATCTAAAATATTCAAAGACCAAGCAGCTGACCAGAC...GGGCTGTAAAGTGAACAGGGTGATAAATGAATAGAGTGAAGAGGGAATTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
||
| CDS GCA 90 bp | TTGAAGGACTCCTGTGCTGGCTCCATCCAGGGCCAGCACCTCCAATaGACTGGACTGTGTGGCTGCAGTGTCCATTCAGGTGCAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKDSCAGSIQGQHLQ*TGLCGCSVHSGAGH Trigger: GTGGCCTGCACCTGAATGGACACTGCAGCCACACAGTCCAGTGCATTGGAGGTGCTGGCCCTGGATGGAGCCAGCACAGGAGTCCTTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
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| CDS GCA 90 bp | GCACCTCCAATGCACTGGACTGTGTGGCTGCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTGCTGCTATGG | + |
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Preference number: 5 (lower is better) Translates to: APPMHWTVWLQCPFR*RPLSKRGDEALLLW Trigger: CCATAGCAGCAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCTGAATGGACACTGCAGCCACACAGTCCAGTGCATTGGAGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | CACCTTGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGTGCTCTGCTCCTCCCTaGATACTTAGGCCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: HLGGNEGVDAVEDRRQILCSAPP*ILRPRP Trigger: TGGCCTGGGCCTAAGTATCAAGGGAGGAGCAGAGCA...CAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS TCA 90 bp | AGGCCCAGGCCACCCACAGGTTGTCTGCGAAGTGTAACAGTTCTGTaGTTAGCACCAGGAGGAGCTCCCCCGATGCAGACGACATCTTGC | + |
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Preference number: 5 (lower is better) Translates to: RPRPPTGCLRSVTVL*LAPGGAPPMQTTSC Trigger: GCAAGATGTCGTCTGCATCGGGGGAGCTCCTCCTGGTGCTAATCACAGAACTGTTACACTTCGCAGACAACCTGTGGGTGGCCTGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | ACCTTGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGGCAGGCCACCCACAGGTaGTCTGCGAAGTGTAACAGT | + |
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Preference number: 5 (lower is better) Translates to: TLAAMKEWMQWRTAVKSWQATHR*SAKCNS Trigger: ACTGTTACACTTCGCAGACAACCTGTGGGTGGCCTG...CCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | AAAGCAGGTGAATCCCAGAGCAAAATCCACCGTGAAGCACAGCGTCTCCCCTTGTGCTCTGCTCCTCCCTaGATACTTAGGCCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: KAGESQSKIHREAQRLPLCSAPP*ILRPRP Trigger: TGGCCTGGGCCTAAGTATCAAGGGAGGAGCAGAGCA...CAAGGGGAGACGCTGTGCTTCACGGTGGATTTTGCTCTGGGATTCACCTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | CGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCTGAACTTCTGCTCTGCTCCTCCCTaGATACTTAGGCCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RLPLPAAQICFGPGSLNFCSAPP*ILRPRP Trigger: TGGCCTGGGCCTAAGTATCAAGGGAGGAGCAGAGCA...GAAGTTCAGAGAACCGGGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | GCGGCGTTACATCACCAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGCTGGGCAGTGGAGAATaGAAGGACTCCTGTGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: AALHHQLFETGWDGIVSELGSGE*KDSCAG Trigger: GCCAGCACAGGAGTCCTTCAATTCTCCACTGCCCAG...CTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTGGTGATGTAACGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
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| CDS-3UTR CAA 90 bp | GGTTCTCTGAACTTCCATGAAAGTTGCTCTTTGGAATGCCTTCTCCCACACGGCCTGGGCAGTGGAGAATaGAAGGACTCCTGTGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GSLNFHESCSLECLLPHGLGSGE*KDSCAG Trigger: GCCAGCACAGGAGTCCTTCAATTCTCCACTGCCCAG...GCCGTGTGGGAGAAGGCATTCCAAAGAGCAACTTTCATGGAAGTTCAGAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTGGCTCTTCCCATGGTaGGCCAGGACGCTGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QRESYQLACGKPISLKKGWLFPW*ARTLKQ Trigger: CTGCTTCAGCGTCCTGGCCAACCATGGGAAGAGCCA...CCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
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| CDS-3UTR CAA 90 bp | ACCTTGGCGGCAATGAAGGAGTGGATGCAGTGGAGGACCGCCGTCAAATCCTGGGACGACATCTTGCTTTaGAATAGTCAGCACCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: TLAAMKEWMQWRTAVKSWDDILL*NSQHLF Trigger: AAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGTC...CCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | GGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAATGCTCTGCTCCTCCCTaGATACTTAGGCCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GRVTNLPVGSPFLLRKGKCSAPP*ILRPRP Trigger: TGGCCTGGGCCTAAGTATCAAGGGAGGAGCAGAGCA...TTTACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
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| CDS-3UTR CAA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTAAGAGTTGTCAGCTCCTaGGAGCCTCTCATTTACCCA | + |
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Preference number: 5 (lower is better) Translates to: QLFETGWDGIVSEDPEFLRVVSS*EPLIYP Trigger: TGGGTAAATGAGAGGCTCCAAGGAGCTGACAACTCT...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
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| CDS-3UTR CAA 90 bp | AAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGACCCGGTTCTCGACGACATCTTGCTTTaGAATAGTCAGCACCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KHSVSPCQLHRYVLDPVLDDILL*NSQHLF Trigger: AAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGTC...GAGAACCGGGTCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | ATCCACCGTGAAGCACAGCGTCTCCCCTTGCCAGCTGCACAGATATGTTTTGGAGACGACATCTTGCTTTaGAATAGTCAGCACCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: IHREAQRLPLPAAQICFGDDILL*NSQHLF Trigger: AAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGTC...TCCAAAACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGCTTCACGGTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | AAACTTGTTTTAGCTGCTGCACAGGTATCTTCTTGCCATACTCTGGCTATCCATCAGGCCACCCACAGGTaGTCTGCGAAGTGTAACAGT | + |
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Preference number: 5 (lower is better) Translates to: KLVLAAAQVSSCHTLAIHQATHR*SAKCNS Trigger: ACTGTTACACTTCGCAGACAACCTGTGGGTGGCCTG...ATGGATAGCCAGAGTATGGCAAGAAGATACCTGTGCAGCAGCTAAAACAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS-3UTR CAA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTGCACAGCGTCTCCCCTaGCCAGCTGCACAGATATGT | + |
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Preference number: 5 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFAQRLP*PAAQIC Trigger: ACATATCTGTGCAGCTGGCAAGGGGAGACGCTGTGC...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
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| CDS-3UTR CAA 90 bp | GGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAAGATGCAGACGACATCTaGCTTTTGAATAGTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: GRVTNLPVGSPFLLRKGKDADDI*LLNSQH Trigger: GTGCTGACTATTCAAAAGCAAGATGTCGTCTGCATC...TTTACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
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| CDS-3UTR CAA 90 bp | ATGGTGACTTCTCACTCTCCTACCTGGCACTTTGCAAAAATAAAATTTGGGTTTCAGGCCACCCACAGGTaGTCTGCGAAGTGTAACAGT | + |
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Preference number: 5 (lower is better) Translates to: MVTSHSPTWHFAKIKFGFQATHR*SAKCNS Trigger: ACTGTTACACTTCGCAGACAACCTGTGGGTGGCCTG...AAACCCAAATTTTATTTTTGCAAAGTGCCAGGTAGGAGAGTGAGAAGTCACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
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| CDS-3UTR CAA 90 bp | CAGCTGTTTGAGACAGGCTGGGATGGGATAGTTTCAGAGGACCCTGAGTTCCTATCAGCTGCTTGGTCTTaGAATATTTTAGATATGACG | + |
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Preference number: 5 (lower is better) Translates to: QLFETGWDGIVSEDPEFLSAAWS*NILDMT Trigger: CGTCATATCTAAAATATTCAAAGACCAAGCAGCTGA...TAGGAACTCAGGGTCCTCTGAAACTATCCCATCCCAGCCTGTCTCAAACAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
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| CDS-3UTR CAA 90 bp | GGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTAAAGACGACATCTTGCTTTaGAATAGTCAGCACCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: GRVTNLPVGSPFLLRKGKDDILL*NSQHLF Trigger: AAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGTC...TTTACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGGAGAGTTACCAACTTGCCTGTGGGAAGCCCATTTCTCTTAAGAAAGGGTTCACAGTCAAAATCTaGGAGACCAAGATACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: QRESYQLACGKPISLKKGFTVKI*ETKIQV Trigger: AACCTGTATCTTGGTCTCCAAGATTTTGACTGTGAA...CCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTCTCCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021004.14 |
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| CDS-3UTR CAA 90 bp | GTTCTTTGTCTTACCGTCAAAGCAGGTGAATCCCAGAGCAAAATCCACCGTGAATCAGCTGCTTGGTCTTaGAATATTTTAGATATGACG | + |
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Preference number: 5 (lower is better) Translates to: VLCLTVKAGESQSKIHRESAAWS*NILDMT Trigger: CGTCATATCTAAAATATTCAAAGACCAAGCAGCTGA...TTCACGGTGGATTTTGCTCTGGGATTCACCTGCTTTGACGGTAAGACAAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
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| CDS CCA 72 bp | TGCTGGCTCCATCCAGGGCCAGCACCTCCAATGCACTaGACTGTGTGGCTGCAGTGTCCATTCAGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CWLHPGPAPPMH*TVWLQCPFRCR Trigger: CCTGCACCTGAATGGACACTGCAGCCACACAGTCCAGTGCATTGGAGGTGCTGGCCCTGGATGGAGCCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
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| CDS CAA 72 bp | GATATGACGACGGGGACCCCATGCTCTGCTCCTCCCTaGATACTTAGGCCCAGGCCACCCACAGGTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DMTTGTPCSAPP*ILRPRPPTGCL Trigger: CAGACAACCTGTGGGTGGCCTGGGCCTAAGTATCAAGGGAGGAGCAGAGCATGGGGTCCCCGTCGTCATATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021004.14 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS GCA 72 bp | ATGCACTGGACTGTGTGGCTGCAGTGTCCATTCAGGTaGAGGCCACTGTCAAAGAGAGGCGATGAGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: MHWTVWLQCPFR*RPLSKRGDEAL Trigger: CAGGGCCTCATCGCCTCTCTTTGACAGTGGCCTGCACCTGAATGGACACTGCAGCCACACAGTCCAGTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149710.8 |
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| CDS TCA 72 bp | CCACCCACAGGTTGTCTGCGAAGTGTAACAGTTCTGTaGTTAGCACCAGGAGGAGCTCCCCCGATGCAGACG | + |
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Preference number: 6 (lower is better) Translates to: PPTGCLRSVTVL*LAPGGAPPMQT Trigger: CGTCTGCATCGGGGGAGCTCCTCCTGGTGCTAATCACAGAACTGTTACACTTCGCAGACAACCTGTGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021004.14 ENSMUST00000149710.8 |
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| CDS CAA 72 bp | GATATGACGACGGGGACCCCATGCTCTGCTCCTCCCTaGATACTTAGGCCCAGGCCACCCACAGGTTGTATT | + |
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Preference number: 6 (lower is better) Translates to: DMTTGTPCSAPP*ILRPRPPTGCI Trigger: AATACAACCTGTGGGTGGCCTGGGCCTAAGTATCAAGGGAGGAGCAGAGCATGGGGTCCCCGTCGTCATATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133324.8 |
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| CDS CAA 72 bp | AGGAGGAGCTCCCCCGATGCAGACGACATCTTGCTTTaGAATAGTCAGCACCTCTTTTGTCAGCTTCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: RRSSPDADDILL*NSQHLFCQLQA Trigger: CGCCTGAAGCTGACAAAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGTCTGCATCGGGGGAGCTCCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021004.14 ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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| CDS CAA 90 bp | ATTAGCACCAGGAGGAGCTCCCCCGATGCAGACGACATCTTGCTTTaGAATAGTCAGCACCTCTTTTGTCAGCTTCAGGCGGACGTCATA | + |
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Preference number: 6 (lower is better) Translates to: ISTRRSSPDADDILL*NSQHLFCQLQADVI Trigger: TATGACGTCCGCCTGAAGCTGACAAAAGAGGTGCTGACTATTCAAAAGCAAGATGTCGTCTGCATCGGGGGAGCTCCTCCTGGTGCTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021004.14 ENSMUST00000133324.8 ENSMUST00000142046.8 ENSMUST00000149710.8 |
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