RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNTB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041308

Ensembl transcript IDs: ENSMUST00000047425.5, ENSMUST00000212524.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAGGGTGGGACAGGGCGGGGTCACTGTGGTGCAAGGACCTGTGTaGGATGTGCCTGAGGGACGGCAGCTGCACACTAGCACCGGAGAG +
Preference number: 1 (lower is better)
Translates to: GRVGQGGVTVVQGPV*DVPEGRQLHTSTGE
Trigger: CTCTCCGGTGCTAGTGTGCAGCTGCCGTCCCTCAGGCACATCCCACACAGGTCCTTGCACCACAGTGACCCCGCCCTGTCCCACCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CCA 90 bp CTCCCAGACCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTaGGAAGATGTGCAGTGCTTAGGAGCACTGGCTGCGCCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: LPDLSRAGLYVTCRG*EDVQCLGALAAPAE
Trigger: CTCTGCAGGCGCAGCCAGTGCTCCTAAGCACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGGTCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 90 bp AAAGGTCGGCCCTTCCTAAAACCCTGTTGTGGTCCAGCAGTGGTCTaGAGGTCCTCAGGAAGGCACTGTGATGGAGGCAGGAGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: KGRPFLKPCCGPAVV*RSSGRHCDGGRSKG
Trigger: GCCCTTGCTCCTGCCTCCATCACAGTGCCTTCCTGAGGACCTGCAGACCACTGCTGGACCACAACAGGGTTTTAGGAAGGGCCGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 90 bp AACCAGACTGTGCAAGTTCTGAGTCCTAAAGGCAGCACTTATGGGTaGCAGAGCTGGTGCCAGATAGAGGTGGGGAGGGTGGGACAGGGC +
Preference number: 1 (lower is better)
Translates to: NQTVQVLSPKGSTYG*QSWCQIEVGRVGQG
Trigger: GCCCTGTCCCACCCTCCCCACCTCTATCTGGCACCAGCTCTGCCACCCATAAGTGCTGCCTTTAGGACTCAGAACTTGCACAGTCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 90 bp CCTCCTTCCATTTCTTCATTCCTTCAGCCCCCTGGACTTGGGTGCTaGGATCTGCTCGGCAGTCCTCATGACAGCAGCAGCCCTCTTACC +
Preference number: 1 (lower is better)
Translates to: PPSISSFLQPPGLGC*DLLGSPHDSSSPLT
Trigger: GGTAAGAGGGCTGCTGCTGTCATGAGGACTGCCGAGCAGATCTCAGCACCCAAGTCCAGGGGGCTGAAGGAATGAAGAAATGGAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 90 bp AGCTCTCATCTGCAGGATGACCTGGGACTGTGTGGAATGCACAGATaGCTAGGAAGTGGCCCATCCAACAGGAGGCGCTCCACAGTTTCC +
Preference number: 1 (lower is better)
Translates to: SSHLQDDLGLCGMHR*LGSGPSNRRRSTVS
Trigger: GGAAACTGTGGAGCGCCTCCTGTTGGATGGGCCACTTCCTAGGCATCTGTGCATTCCACACAGTCCCAGGTCATCCTGCAGATGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 90 bp ACTTTCAACTCCCCATCTCCCTTGCCTCCCAGACCTCTCAAGAGCTaGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGCTT +
Preference number: 1 (lower is better)
Translates to: TFNSPSPLPPRPLKS*TVRHVPWLGRCAVL
Trigger: AAGCACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGGTCTGGGAGGCAAGGGAGATGGGGAGTTGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 90 bp TTTCACACCCGCAGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTACTaGTATAGCTCTGCTTTCTGCACTCAGAGCTGGGACATTTCTTCT +
Preference number: 1 (lower is better)
Translates to: FHTRSSVGQEPELSY*YSSAFCTQSWDISS
Trigger: AGAAGAAATGTCCCAGCTCTGAGTGCAGAAAGCAGAGCTATAGCAGTAAGAGAGCTCTGGCTCCTGCCCCACTGAGCTGCGGGTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 90 bp GATGAGCACTGTCACAAGGATATGGAGGCAAAGTCAGCGCAAGGCTaGGGTGAGAAGTCTAACCCGGGATCCCAGTCCTATCATGGAGTA +
Preference number: 1 (lower is better)
Translates to: DEHCHKDMEAKSAQG*GEKSNPGSQSYHGV
Trigger: TACTCCATGATAGGACTGGGATCCCGGGTTAGACTTCTCACCTCAGCCTTGCGCTGACTTTGCCTCCATATCCTTGTGACAGTGCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp GCAAAGGGCAGGTTTAGAGAACAAGACACGCAAGGCGTGACCCAGTaGCTCCAATACATTTGCCAACAAGGGGAGAGAGCCATGCAACTC +
Preference number: 1 (lower is better)
Translates to: AKGRFREQDTQGVTQ*LQYICQQGERAMQL
Trigger: GAGTTGCATGGCTCTCTCCCCTTGTTGGCAAATGTATTGGAGTCACTGGGTCACGCCTTGCGTGTCTTGTTCTCTAAACCTGCCCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 90 bp AGGGTGACACCTCTGCTTGGCGTCTGCTCTTTCCTCTGGCTACCCTaGCAATCAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTC +
Preference number: 1 (lower is better)
Translates to: RVTPLLGVCSFLWLP*QSRQLRLCTNTYVF
Trigger: GAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTGATTGGCAGGGTAGCCAGAGGAAAGAGCAGACGCCAAGCAGAGGTGTCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CCA 90 bp AAGGAGCCAGTCCATTCTTGGCACCGAGAGCTGCCAGCAGCCACGTaGGGATGGAAGCAGAATATTTGCACATTTAAGTATCGTGTACAA +
Preference number: 1 (lower is better)
Translates to: KEPVHSWHRELPAAT*GWKQNICTFKYRVQ
Trigger: TTGTACACGATACTTAAATGTGCAAATATTCTGCTTCCATCCCCACGTGGCTGCTGGCAGCTCTCGGTGCCAAGAATGGACTGGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 90 bp TGCTCTTTCCTCTGGCTACCCTGCCAATCAAGGCAGCTCAGGCTCTaGACAAATACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATT +
Preference number: 1 (lower is better)
Translates to: CSFLWLPCQSRQLRL*TNTYVFFPFTLYPI
Trigger: AATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTGATTGGCAGGGTAGCCAGAGGAAAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR GCA 90 bp AGCCTAGAACTCACTGTAAACCTGGCTGGCCTTGAGATCTGCCTCTaGCTCCCTGATAAGACTAAGCACTTAAGCCAATGTGTCTCACAA +
Preference number: 1 (lower is better)
Translates to: SLELTVNLAGLEICL*LPDKTKHLSQCVSQ
Trigger: TTGTGAGACACATTGGCTTAAGTGCTTAGTCTTATCAGGGAGGCAGAGGCAGATCTCAAGGCCAGCCAGGTTTACAGTGAGTTCTAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp TTTCAGGAGAAACAAACAGGATGGTCTTCCAGGTCACACTTACCCTaGGTCATGACAACATGTGGCCGTGCTGAACAAAATGCAGGTGAC +
Preference number: 1 (lower is better)
Translates to: FQEKQTGWSSRSHLP*VMTTCGRAEQNAGD
Trigger: GTCACCTGCATTTTGTTCAGCACGGCCACATGTTGTCATGACTCAGGGTAAGTGTGACCTGGAAGACCATCCTGTTTGTTTCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CCA 90 bp CCAGTCCATTCTTGGCACCGAGAGCTGCCAGCAGCCACGTGGGGATaGAAGCAGAATATTTGCACATTTAAGTATCGTGTACAATCAATA +
Preference number: 1 (lower is better)
Translates to: PVHSWHRELPAATWG*KQNICTFKYRVQSI
Trigger: TATTGATTGTACACGATACTTAAATGTGCAAATATTCTGCTTCCATCCCCACGTGGCTGCTGGCAGCTCTCGGTGCCAAGAATGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 90 bp ACTGAAATTCTCACCTCTGAAAACTTGTCACTGATCAGCTGGATGTaGTTTCTGCCTCTTTTTAGTGGTGTTCCAGAGGATGCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: TEILTSENLSLISWM*FLPLFSGVPEDARA
Trigger: GGCCCTGGCATCCTCTGGAACACCACTAAAAAGAGGCAGAAACCACATCCAGCTGATCAGTGACAAGTTTTCAGAGGTGAGAATTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 90 bp TCCCAGGCAGAGGCAGATAGATCTCTAGAGAGTTTGAGGCCAGCCTaGTCTATAAAGCTATTCCAGGATAGCACAGACACTCTGTTTCAA +
Preference number: 1 (lower is better)
Translates to: SQAEADRSLESLRPA*SIKLFQDSTDTLFQ
Trigger: TTGAAACAGAGTGTCTGTGCTATCCTGGAATAGCTTTATAGACCAGGCTGGCCTCAAACTCTCTAGAGATCTATCTGCCTCTGCCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp GGCAAGAAGTTAAGTTTAAGTTATTTCAAAGCTGGTGCACAGCTGTaGTCCCCAGTGCTTAGTAGAGGCAGGAGGACCAGCAATTTGAGG +
Preference number: 1 (lower is better)
Translates to: GKKLSLSYFKAGAQL*SPVLSRGRRTSNLR
Trigger: CCTCAAATTGCTGGTCCTCCTGCCTCTACTAAGCACTGGGGATCACAGCTGTGCACCAGCTTTGAAATAACTTAAACTTAACTTCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 90 bp AGAAGGATTGAAAGAGGCGTCACTACTGGAAAATTCAGCCAACCCTaGCTCACTTTCTCTAGGTCTCTTTCCACTGAGTTTGAACGCCAA +
Preference number: 1 (lower is better)
Translates to: RRIERGVTTGKFSQP*LTFSRSLSTEFERQ
Trigger: TTGGCGTTCAAACTCAGTGGAAAGAGACCTAGAGAAAGTGAGCCAGGGTTGGCTGAATTTTCCAGTAGTGACGCCTCTTTCAATCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp TCCTGTTCCAGGTATCTGGACCCTTCTTCTGACCTCTACAAGCACTaGACAGATGTAGCACACATCCATGCAGGTAAAACAACTACATAC +
Preference number: 1 (lower is better)
Translates to: SCSRYLDPSSDLYKH*TDVAHIHAGKTTTY
Trigger: GTATGTAGTTGTTTTACCTGCATGGATGTGTGCTACATCTGTTCAGTGCTTGTAGAGGTCAGAAGAAGGGTCCAGATACCTGGAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 90 bp AAGCCTTCATTTTATAAGCCTCAAATGACAGTATTAAAAACCCTGTaGGCCACAGGCCTCAGCCAGAAGAAGAGCACAGCTTACCCACTT +
Preference number: 1 (lower is better)
Translates to: KPSFYKPQMTVLKTL*ATGLSQKKSTAYPL
Trigger: AAGTGGGTAAGCTGTGCTCTTCTTCTGGCTGAGGCCTGTGGCCCACAGGGTTTTTAATACTGTCATTTGAGGCTTATAAAATGAAGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp AGCAGCTCCTTAGGCAGTCAATACCAAATTCCTCTTACATCACTATaGTGTGGGAAAACTCTGCTGCTTGAATGTACACAATCCCGACGT +
Preference number: 1 (lower is better)
Translates to: SSSLGSQYQIPLTSL*CGKTLLLECTQSRR
Trigger: ACGTCGGGATTGTGTACATTCAAGCAGCAGAGTTTTCCCACATCATAGTGATGTAAGAGGAATTTGGTATTGACTGCCTAAGGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp CCAAAGGCACATTTGGTAAGCAATAAGAAATGGCTTAGCGTAAGATaGGGATCTTTCAAAATAAACTGTAGACCATCCCCTGGCTCCTAC +
Preference number: 1 (lower is better)
Translates to: PKAHLVSNKKWLSVR*GSFKINCRPSPGSY
Trigger: GTAGGAGCCAGGGGATGGTCTACAGTTTATTTTGAAAGATCCTCATCTTACGCTAAGCCATTTCTTATTGCTTACCAAATGTGCCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 90 bp CTCTGCTTTCTGCACTCAGAGCTGGGACATTTCTTCTTTTTCTTTTaGGTTGAAGATGTATCAGGGATGGAACCTATCTCAGGGTTAAGA +
Preference number: 1 (lower is better)
Translates to: LCFLHSELGHFFFFF*VEDVSGMEPISGLR
Trigger: TCTTAACCCTGAGATAGGTTCCATCCCTGATACATCTTCAACTCAAAAGAAAAAGAAGAAATGTCCCAGCTCTGAGTGCAGAAAGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 90 bp CCAAATTCCTCTTACATCACTATGATGTGGGAAAACTCTGCTGCTTaGATGTACACAATCCCGACGTGTAGCATGATTTCTACCAACAAC +
Preference number: 1 (lower is better)
Translates to: PNSSYITMMWENSAA*MYTIPTCSMISTNN
Trigger: GTTGTTGGTAGAAATCATGCTACACGTCGGGATTGTGTACATTCAAGCAGCAGAGTTTTCCCACATCATAGTGATGTAAGAGGAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp TTTCTGAACACTGAACTGAAATTCTCACCTCTGAAAACTTGTCACTaGTCAGCTGGATGTGGTTTCTGCCTCTTTTTAGTGGTGTTCCAG +
Preference number: 1 (lower is better)
Translates to: FLNTELKFSPLKTCH*SAGCGFCLFLVVFQ
Trigger: CTGGAACACCACTAAAAAGAGGCAGAAACCACATCCAGCTGATCAGTGACAAGTTTTCAGAGGTGAGAATTTCAGTTCAGTGTTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 90 bp CTTTCTGCACTCAGAGCTGGGACATTTCTTCTTTTTCTTTTGAGTTaGAGATGTATCAGGGATGGAACCTATCTCAGGGTTAAGACTTTC +
Preference number: 1 (lower is better)
Translates to: LSALRAGTFLLFLLS*RCIRDGTYLRVKTF
Trigger: GAAAGTCTTAACCCTGAGATAGGTTCCATCCCTGATACATCTTCAACTCAAAAGAAAAAGAAGAAATGTCCCAGCTCTGAGTGCAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 90 bp CATCCCCAGCTCAGAGAGTACTTTCAGGGAGGGATTAAACAAGTTTaGAAAGCTGACCTCACAGGTAATAAAAAGCAAGAAGGATTGAAA +
Preference number: 1 (lower is better)
Translates to: HPQLREYFQGGIKQV*KADLTGNKKQEGLK
Trigger: TTTCAATCCTTCTTGCTTTTTATTACCTGTGAGGTCAGCTTTTCAAACTTGTTTAATCCCTCCCTGAAAGTACTCTCTGAGCTGGGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 90 bp TTTTCAGGACTTATTTATGTAGTGTGTGTATATGAGTGCTTTGTCTaGATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCATAGG +
Preference number: 1 (lower is better)
Translates to: FSGLIYVVCVYECFV*MYSCTPEKDIESHR
Trigger: CCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAAAGCACTCATATACACACACTACATAAATAAGTCCTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp GGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTGTGTGGGATGTGCCTaGGGGACGGCAGCTGCACAC +
Preference number: 2 (lower is better)
Translates to: GVSAFHTRSSVGQEPELSCVGCA*GTAAAH
Trigger: GTGTGCAGCTGCCGTCCCTCAGGCACATCCCACACA...AGAGAGCTCTGGCTCCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCCTCAAGGACAACTCCTaGAAGCCAGCTGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRLKDNS*KPAGIP
Trigger: TGGGATCCCAGCTGGCTTTCAGGAGTTGTCCTTGAG...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp CTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTGCGGGGTCACTGTGGTaGAAGGACCTGTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: LLRNRGQRLLSVSLVSPPAGSLW*KDLCGM
Trigger: CATCCCACACAGGTCCTTGCACCACAGTGACCCCGC...AGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp GGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGAGCCAGAGCTCTCTGGCAGCACTTATGGGTaGCAGAGCTGGTGCCAGATA +
Preference number: 2 (lower is better)
Translates to: GVSAFHTRSSVGQEPELSGSTYG*QSWCQI
Trigger: TATCTGGCACCAGCTCTGCCACCCATAAGTGCTGCC...AGAGAGCTCTGGCTCCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCCTCAGGAAGGCACTGTaGTGGAGGCAGGAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSLRKAL*WRQEQG
Trigger: CCCTTGCTCCTGCCTCCATCACAGTGCCTTCCTGAG...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCGACCTGTGTGGGATGTaGCTGAGGGACGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVDLCGM*LRDGSC
Trigger: GCAGCTGCCGTCCCTCAGGCACATCCCACACAGGTC...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp CCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGAGCTGTGATCCCCAGTaGTTAGTAGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PLKSWTVRHVPWLGRCAVSCDPQ*LVEAGG
Trigger: TCCTCCTGCCTCTACTAAGCACTGGGGATCACAGCT...CACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCAGACTGTGCAAGTTCTaGGTCCTAAAGGCAGCACTT +
Preference number: 2 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGRLCKF*VLKAAL
Trigger: AAGTGCTGCCTTTAGGACTCAGAACTTGCACAGTCT...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp AGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTACTGCTATAGCTCTGCTTTCTGCCTCAAGGACAACTCCTaGAAGCCAGCTGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: SSVGQEPELSYCYSSAFCLKDNS*KPAGIP
Trigger: TGGGATCCCAGCTGGCTTTCAGGAGTTGTCCTTGAG...GCAGAAAGCAGAGCTATAGCAGTAAGAGAGCTCTGGCTCCTGCCCCACTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp CCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGCTCAGTGGTACTGTATaGTTAGTATGCCCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: PLKSWTVRHVPWLGRCAVLSGTV*LVCPRP
Trigger: GGGCCTTGGGCATACTAAGCATACAGTACCACTGAG...CACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp CCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGATCTGCAGGATGACCTaGGACTGTGTGGAATGCACA +
Preference number: 2 (lower is better)
Translates to: PLKSWTVRHVPWLGRCAVICRMT*DCVECT
Trigger: TGTGCATTCCACACAGTCCCAGGTCATCCTGCAGAT...CACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCATGCCACTAAGGAACTaGCCTCAAGGACAACTCCTG +
Preference number: 2 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVMPLRN*PQGQLL
Trigger: CAGGAGTTGTCCTTGAGGTCAGTTCCTTAGTGGCAT...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp CTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGCAGGGAAAAGAAACCTaGTTACTTGAGATCACATTA +
Preference number: 2 (lower is better)
Translates to: LSVSLVSPPFTPAAQWGRQGKET*LLEITL
Trigger: TAATGTGATCTCAAGTAATCAGGTTTCTTTTCCCTG...CCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGCTAATAAAGCTCCACTaGCCCTACCCAAAGGCACAT +
Preference number: 2 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQLIKLH*PYPKAH
Trigger: ATGTGCCTTTGGGTAGGGTCAGTGGAGCTTTATTAG...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCACTCCTGAAAGCCAGCTaGGATCCCAGGAACAGCAGT +
Preference number: 2 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTALLKAS*DPRNSS
Trigger: ACTGCTGTTCCTGGGATCCCAGCTGGCTTTCAGGAG...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGATGCCACTAAGGAACTaGCCTCAAGGACAACTCCTG +
Preference number: 2 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGMPLRN*PQGQLL
Trigger: CAGGAGTTGTCCTTGAGGTCAGTTCCTTAGTGGCAT...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp TATGAGTGCTTTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCGGAGGACAGCAGGGTaGCACCTCTGCTTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: YECFVCMYSCTPEKDIESRRTAG*HLCLAS
Trigger: AGACGCCAAGCAGAGGTGTCACCCTGCTGTCCTCCG...GGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAAAGCACTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp ATCCCCAGCTCAGAGAGTACTTTCAGGGAGGGATTAAACAAGTTTGAAAAGCTGGGTCCAGCAGTGGTCTaGAGGTCCTCAGGAAGGCAC +
Preference number: 2 (lower is better)
Translates to: IPSSESTFREGLNKFEKLGPAVV*RSSGRH
Trigger: GTGCCTTCCTGAGGACCTGCAGACCACTGCTGGACC...CAGCTTTTCAAACTTGTTTAATCCCTCCCTGAAAGTACTCTCTGAGCTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp TTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCATAGGACAACTTAGGAGCACTGGCTaGGCCTGCAGAGGACCTGGG +
Preference number: 2 (lower is better)
Translates to: LSACIAAHQKRTLNPIGQLRSTG*ACRGPG
Trigger: CCCAGGTCCTCTGCAGGCGCAGCCAGTGCTCCTAAG...TTGTCCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCAAGGCTATACCCAAATaGTTCCTACACAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSKAIPK*FLHKEK
Trigger: CTTTTCTTTGTGTAGGAATCATTTGGGTATAGCCTT...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCCTTTTTCTTTTGAGTTaGAGATGTATCAGGGATGGA +
Preference number: 2 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSLFLLS*RCIRDG
Trigger: TCCATCCCTGATACATCTTCAACTCAAAAGAAAAAG...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp CCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGGTTCTTCCAAGGTTTTaGAAACAAACAAAGCCACAT +
Preference number: 2 (lower is better)
Translates to: PLKSWTVRHVPWLGRCAVVLPRF*KQTKPH
Trigger: ATGTGGCTTTGTTTGTTTTCAAAACCTTGGAAGAAC...CACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp GTCACAAGGATATGGAGGCAAAGTCAGCGCAAGGCTGAGGTGAGAAGTCTAACCCAGCTGGCCTTGGATTaGGTACAGCTAATCTTGGAT +
Preference number: 2 (lower is better)
Translates to: VTRIWRQSQRKAEVRSLTQLALD*VQLILD
Trigger: ATCCAAGATTAGCTGTACTCAATCCAAGGCCAGCTG...GGTTAGACTTCTCACCTCAGCCTTGCGCTGACTTTGCCTCCATATCCTTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp TTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCATAGGACAAAAACCTGGCTGGCCTTaGGATCTGCCTCTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: LSACIAAHQKRTLNPIGQKPGWP*DLPLPP
Trigger: GGGAGGCAGAGGCAGATCTCAAGGCCAGCCAGGTTT...TTGTCCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp AGAAAGCAACACTCCTCTTTCCGGGCAGCATTTCCAACTTGCTTTTCAACTTGGGGCAGCACTTATGGGTaGCAGAGCTGGTGCCAGATA +
Preference number: 2 (lower is better)
Translates to: RKQHSSFRAAFPTCFSTWGSTYG*QSWCQI
Trigger: TATCTGGCACCAGCTCTGCCACCCATAAGTGCTGCC...CCAAGTTGAAAAGCAAGTTGGAAATGCTGCCCGGAAAGAGGAGTGTTGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp GATACAAAAGAAGAGAGAGTGACGGAGTCTCCCACTCTTCCGAACACTTCAGGAGGCTGCTACAGCTTCTaGAACAAGCAGCTTAGGACC +
Preference number: 2 (lower is better)
Translates to: DTKEERVTESPTLPNTSGGCYSF*NKQLRT
Trigger: GGTCCTAAGCTGCTTGTTCCAGAAGCTGTAGCAGCC...TCCTGAAGTGTTCGGAAGAGTGGGAGACTCCGTCACTCTCTCTTCTTTTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCAAGGCTATACCCAAATaGTTCCTACACAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVKAIPK*FLHKEK
Trigger: CTTTTCTTTGTGTAGGAATCATTTGGGTATAGCCTT...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGAGACCTGTGTGGGATGTaGCTGAGGGACGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGDLCGM*LRDGSC
Trigger: GCAGCTGCCGTCCCTCAGGCACATCCCACACAGGTC...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGTATAGCTCTGCTTTCTaGACTCAGAGCTGGGACATT +
Preference number: 2 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGYSSAF*TQSWDI
Trigger: AATGTCCCAGCTCTGAGTGCAGAAAGCAGAGCTATA...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp ATACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTATGGGTGGCAGAGCTaGTGCCAGATAGAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: ILMFSSLSPSTPFEEPYPYGWQS*CQIEVG
Trigger: CCCCACCTCTATCTGGCACCAGCTCTGCCACCCATA...GGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp TACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTTATGGGTGGCAGAGCTaGTGCCAGATAGAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: YLCFLPFHPLPHLKSHIPYGWQS*CQIEVG
Trigger: CCCCACCTCTATCTGGCACCAGCTCTGCCACCCATA...AGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp TCAATTGGTACAAACAGGCTTTCTGTTGTTGAGGTTTTTGGGTTTGCCTGTTTTGCGGGGTCACTGTGGTaGAAGGACCTGTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: SIGTNRLSVVEVFGFACFAGSLW*KDLCGM
Trigger: CATCCCACACAGGTCCTTGCACCACAGTGACCCCGC...AAAACAGGCAAACCCAAAAACCTCAACAACAGAAAGCCTGTTTGTACCAATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGGCAGCATTTCCAACTTaGTTTTCAACTTGGACACCA +
Preference number: 2 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGAAFPT*FSTWTP
Trigger: TGGTGTCCAAGTTGAAAAGCAAGTTGGAAATGCTGC...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp TTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCATAGGACAAGTTGTGGTCCAGCAGTaGTCTGCAGGTCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: LSACIAAHQKRTLNPIGQVVVQQ*SAGPQE
Trigger: TTCCTGAGGACCTGCAGACCACTGCTGGACCACAAC...TTGTCCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp GTCACAAGGATATGGAGGCAAAGTCAGCGCAAGGCTGAGGTGAGAAGTCTAACCCTGATCAGCTGGATGTaGTTTCTGCCTCTTTTTAGT +
Preference number: 2 (lower is better)
Translates to: VTRIWRQSQRKAEVRSLTLISWM*FLPLFS
Trigger: ACTAAAAAGAGGCAGAAACCACATCCAGCTGATCAG...GGTTAGACTTCTCACCTCAGCCTTGCGCTGACTTTGCCTCCATATCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 90 bp GAACTAGCCCGAAAGTTTCAAATGTTTACATTCCCAGAGAATCTTTaGGGTATCTACAGTCCTCTGTGGCTTCGGAAGGGTGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: ELARKFQMFTFPENL*GIYSPLWLRKGDRA
Trigger: GGCTCTGTCACCCTTCCGAAGCCACAGAGGACTGTAGATACCCAAAAGATTCTCTGGGAATGTAAACATTTGAAACTTTCGGGCTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp TTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCATAGGACAAGGCTGTGAGTGCCTCTaGCTGCTGAGACATCTTGTA +
Preference number: 2 (lower is better)
Translates to: LSACIAAHQKRTLNPIGQGCECL*LLRHLV
Trigger: TACAAGATGTCTCAGCAGGCAGAGGCACTCACAGCC...TTGTCCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 90 bp AGCCAAGAGCTCCAACCACTGAGTGACCTTGCCACACCTGGACTCTaGCTAATTTTTAATGCAATGTGGTTGCTTGTTAATGGAGAAACG +
Preference number: 2 (lower is better)
Translates to: SQELQPLSDLATPGL*LIFNAMWLLVNGET
Trigger: CGTTTCTCCATTAACAAGCAACCACATTGCATTAAAAATTAGCAAGAGTCCAGGTGTGGCAAGGTCACTCAGTGGTTGGAGCTCTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 90 bp GTACAAACAGGCTTTCTGTTGTTGAGGTTTTTGGGTTTGCCTGTTTaGAGGGGCAGGTCCACAGACCTGAGCTGGCTTGTTATTTACTAT +
Preference number: 2 (lower is better)
Translates to: VQTGFLLLRFLGLPV*RGRSTDLSWLVIYY
Trigger: ATAGTAAATAACAAGCCAGCTCAGGTCTGTGGACCTGCCCCTCAAAACAGGCAAACCCAAAAACCTCAACAACAGAAAGCCTGTTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp GTCACAAGGATATGGAGGCAAAGTCAGCGCAAGGCTGAGGTGAGAAGTCTAACCTGGAAATACTTCTTGTaGCAGTCAAAGCTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: VTRIWRQSQRKAEVRSLTWKYFL*QSKLFL
Trigger: AAGAAAGAGCTTTGACTGTCACAAGAAGTATTTCCA...GGTTAGACTTCTCACCTCAGCCTTGCGCTGACTTTGCCTCCATATCCTTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 90 bp TCAGCCAACCCTGGCTCACTTTCTCTAGGTCTCTTTCCACTGAGTTaGAACGCCAACGGGTTCTTGAGTAAGCAGAAAAATGCTAATTTT +
Preference number: 2 (lower is better)
Translates to: SANPGSLSLGLFPLS*NANGFLSKQKNANF
Trigger: AAAATTAGCATTTTTCTGCTTACTCAAGAACCCGTTGGCGTTCAAACTCAGTGGAAAGAGACCTAGAGAAAGTGAGCCAGGGTTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCATGGCTTAGCGTAAGATaGGGATCTTTCAAAATAAAC +
Preference number: 2 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTAWLSVR*GSFKIN
Trigger: GTTTATTTTGAAAGATCCTCATCTTACGCTAAGCCA...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp ATCCCCAGCTCAGAGAGTACTTTCAGGGAGGGATTAAACAAGTTTGAAAAGCTGTATAGCTCTGCTTTCTaGACTCAGAGCTGGGACATT +
Preference number: 2 (lower is better)
Translates to: IPSSESTFREGLNKFEKLYSSAF*TQSWDI
Trigger: AATGTCCCAGCTCTGAGTGCAGAAAGCAGAGCTATA...CAGCTTTTCAAACTTGTTTAATCCCTCCCTGAAAGTACTCTCTGAGCTGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp TATGAGTGCTTTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCGGAGAAATGGCTCAGTaGTTAAGAGCACTGACTGTT +
Preference number: 2 (lower is better)
Translates to: YECFVCMYSCTPEKDIESGEMAQ*LRALTV
Trigger: AACAGTCAGTGCTCTTAACCACTGAGCCATTTCTCC...GGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAAAGCACTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp CAATGCTATATGTCGATGTGCAACTCAAGGGAAGTGTTGTCTAAGCATCTATATAGACTGTGCAAGTTCTaGGTCCTAAAGGCAGCACTT +
Preference number: 2 (lower is better)
Translates to: QCYMSMCNSREVLSKHLYRLCKF*VLKAAL
Trigger: AAGTGCTGCCTTTAGGACTCAGAACTTGCACAGTCT...ATATAGATGCTTAGACAACACTTCCCTTGAGTTGCACATCGACATATAGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp TCAATTGGTACAAACAGGCTTTCTGTTGTTGAGGTTTTTGGGTTTGCCTGTTTTAAGTTATTTCAAAGCTaGTGCACAGCTGTGATCCCC +
Preference number: 2 (lower is better)
Translates to: SIGTNRLSVVEVFGFACFKLFQS*CTAVIP
Trigger: GGGGATCACAGCTGTGCACCAGCTTTGAAATAACTT...AAAACAGGCAAACCCAAAAACCTCAACAACAGAAAGCCTGTTTGTACCAATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR GCA 90 bp TTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCATAGGACAAGGTTTATTAGCTGAGTaGATTTATTCAGCTGAACAA +
Preference number: 2 (lower is better)
Translates to: LSACIAAHQKRTLNPIGQGLLAE*IYSAEQ
Trigger: TTGTTCAGCTGAATAAATGCACTCAGCTAATAAACC...TTGTCCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CCA 90 bp TCAATTGGTACAAACAGGCTTTCTGTTGTTGAGGTTTTTGGGTTTGCCTGTTTTAAAGATGCTTCAGTGTaGACTGTATCGACTTGTAAG +
Preference number: 2 (lower is better)
Translates to: SIGTNRLSVVEVFGFACFKDASV*TVSTCK
Trigger: CTTACAAGTCGATACAGTCCACACTGAAGCATCTTT...AAAACAGGCAAACCCAAAAACCTCAACAACAGAAAGCCTGTTTGTACCAATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR TCA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGACAGGGAAAAGAAACCTaGTTACTTGAGATCACATTA +
Preference number: 2 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGQGKET*LLEITL
Trigger: TAATGTGATCTCAAGTAATCAGGTTTCTTTTCCCTG...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 90 bp ATATTAATATTTCCTTTTTGTTCAGATTCGGGAGCTGTGCTAATCTaGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGATGGT +
Preference number: 2 (lower is better)
Translates to: ILIFPFCSDSGAVLI*RFYVECFRRNKQDG
Trigger: ACCATCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCTCCCGAATCTGAACAAAAAGGAAATATTAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR GCA 72 bp AGTGGCCCATCCAACAGGAGGCGCTCCACAGTTTCCTaGCCACTCACACCCAGGAGCCCACAACATCCCCAA +
Preference number: 3 (lower is better)
Translates to: SGPSNRRRSTVS*PLTPRSPQHPQ
Trigger: TTGGGGATGTTGTGGGCTCCTGGGTGTGAGTGGGCAGGAAACTGTGGAGCGCCTCCTGTTGGATGGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp GGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGAGCCAGAGCTCTCTCACCCTCTACCCCATTaGAAGAGCCATATCCCTGTG +
Preference number: 3 (lower is better)
Translates to: GVSAFHTRSSVGQEPELSHPLPH*KSHIPV
Trigger: CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTG...AGAGAGCTCTGGCTCCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp CCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGTTCAGCCCCCTGGACTaGGGTGCTGAGATCTGCTCG +
Preference number: 3 (lower is better)
Translates to: PLKSWTVRHVPWLGRCAVFSPLD*GAEICS
Trigger: CGAGCAGATCTCAGCACCCAAGTCCAGGGGGCTGAA...CACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp CTGCAGGATGACCTGGGACTGTGTGGAATGCACAGATaGCTAGGAAGTGGCCCATCCAACAGGAGGCGCTCC +
Preference number: 3 (lower is better)
Translates to: LQDDLGLCGMHR*LGSGPSNRRRS
Trigger: GGAGCGCCTCCTGTTGGATGGGCCACTTCCTAGGCATCTGTGCATTCCACACAGTCCCAGGTCATCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp CTGACCACCTGCGGGGGTTGGGGCTGCTACAGCTTCTaGAACAAGCAGCTTAGGACCTTGCTCTTGGTGCTC +
Preference number: 3 (lower is better)
Translates to: LTTCGGWGCYSF*NKQLRTLLLVL
Trigger: GAGCACCAAGAGCAAGGTCCTAAGCTGCTTGTTCCAGAAGCTGTAGCAGCCCCAACCCCCGCAGGTGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp CTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTaGGAAGATGTGCAGTGCTTAGGAGCACTGGCTGCG +
Preference number: 3 (lower is better)
Translates to: LSRAGLYVTCRG*EDVQCLGALAA
Trigger: CGCAGCCAGTGCTCCTAAGCACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCAGCAAGGGCTTCTGTTaGTGCTTCTTTGTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRSKGFC*CFFVVA
Trigger: AGCAACAACAAAGAAGCACAAACAGAAGCCCTTGCT...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp CTCCCAGACCTCTCAAGAGCTGGACTGTACGTCACGTaGCGTGGCTGGGAAGATGTGCAGTGCTTAGGAGCA +
Preference number: 3 (lower is better)
Translates to: LPDLSRAGLYVT*RGWEDVQCLGA
Trigger: TGCTCCTAAGCACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp CCTGGGACTGTGTGGAATGCACAGATGCCTAGGAAGTaGCCCATCCAACAGGAGGCGCTCCACAGTTTCCTG +
Preference number: 3 (lower is better)
Translates to: PGTVWNAQMPRK*PIQQEALHSFL
Trigger: CAGGAAACTGTGGAGCGCCTCCTGTTGGATGGGCCACTTCCTAGGCATCTGTGCATTCCACACAGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp AGACCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTaGCTGGGAAGATGTGCAGTGCTTAGGAGCACTGGC +
Preference number: 3 (lower is better)
Translates to: RPLKSWTVRHVP*LGRCAVLRSTG
Trigger: GCCAGTGCTCCTAAGCACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCGGAGCTGTGCTAATCTaGAGGTTTTATGTAGAGTGT +
Preference number: 3 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRGAVLI*RFYVEC
Trigger: ACACTCTACATAAAACCTCAAGATTAGCACAGCTCC...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 72 bp GGCAGTCCTCATGACAGCAGCAGCCCTCTTACCCACTaGGCCCAGCATTCTAAGGAGCCAGTCCATTCTTGG +
Preference number: 3 (lower is better)
Translates to: GSPHDSSSPLTH*AQHSKEPVHSW
Trigger: CCAAGAATGGACTGGCTCCTTAGAATGCTGGGCTCAGTGGGTAAGAGGGCTGCTGCTGTCATGAGGACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp GAAAGATGGCGTAACAAGCAAGAACACAGGCTGCTCTaGCAGCACCCACACGGCAGCCCAGAACCACCTGTA +
Preference number: 3 (lower is better)
Translates to: ERWRNKQEHRLL*QHPHGSPEPPV
Trigger: TACAGGTGGTTCTGGGCTGCCGTGTGGGTGCTGGCAGAGCAGCCTGTGTTCTTGCTTGTTACGCCATCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp CCTCTGCTTGGCGTCTGCTCTTTCCTCTGGCTACCCTaGCAATCAAGGCAGCTCAGGCTCTGCACAAATACT +
Preference number: 3 (lower is better)
Translates to: PLLGVCSFLWLP*QSRQLRLCTNT
Trigger: AGTATTTGTGCAGAGCCTGAGCTGCCTTGATTGGCAGGGTAGCCAGAGGAAAGAGCAGACGCCAAGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR GCA 72 bp GACTCCAATACATTTGCCAACAAGGGGAGAGAGCCATaGAACTCCTCTTCCCGCCATCCCCAGCTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: DSNTFANKGREP*NSSSRHPQLRE
Trigger: CTCTCTGAGCTGGGGATGGCGGGAAGAGGAGTTGCATGGCTCTCTCCCCTTGTTGGCAAATGTATTGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp ACTCCTGAAAGCCAGCTGGGATCCCAGGAACAGCAGTaGGACCCGGTCATCCCACAGTCACTAATAAAGCTC +
Preference number: 3 (lower is better)
Translates to: TPESQLGSQEQQ*DPVIPQSLIKL
Trigger: GAGCTTTATTAGTGACTGTGGGATGACCGGGTCTCACTGCTGTTCCTGGGATCCCAGCTGGCTTTCAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CCA 72 bp GCTTCCTCTGGCTTCCTCAGACGCCACGCGTGCATATaGTGCACGTGCAGGCAAACGGTCATATGCATAAAA +
Preference number: 3 (lower is better)
Translates to: ASSGFLRRHACI*CTCRQTVICIK
Trigger: TTTTATGCATATGACCGTTTGCCTGCACGTGCACCATATGCACGCGTGGCGTCTGAGGAAGCCAGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp TCTTTCTTATGGGGAGGAGAGCTCTCATCTGCAGGATaGCCTGGGACTGTGTGGAATGCACAGATGCCTAGG +
Preference number: 3 (lower is better)
Translates to: SFLWGGELSSAG*PGTVWNAQMPR
Trigger: CCTAGGCATCTGTGCATTCCACACAGTCCCAGGTCATCCTGCAGATGAGAGCTCTCCTCCCCATAAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp TGTCACAAGGATATGGAGGCAAAGTCAGCGCAAGGCTaGGGTGAGAAGTCTAACCCGGGATCCCAGTCCTAT +
Preference number: 3 (lower is better)
Translates to: CHKDMEAKSAQG*GEKSNPGSQSY
Trigger: ATAGGACTGGGATCCCGGGTTAGACTTCTCACCTCAGCCTTGCGCTGACTTTGCCTCCATATCCTTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp ATTCTAAGGAGCCAGTCCATTCTTGGCACCGAGAGCTaGCAGCAGCCACGTGGGGATGGAAGCAGAATATTT +
Preference number: 3 (lower is better)
Translates to: ILRSQSILGTES*QQPRGDGSRIF
Trigger: AAATATTCTGCTTCCATCCCCACGTGGCTGCTGGCAGCTCTCGGTGCCAAGAATGGACTGGCTCCTTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp CACTCTGGGACAAATGCTAAGTGGTGGCTGGAAAGATaGCGTAACAAGCAAGAACACAGGCTGCTCTGCCAG +
Preference number: 3 (lower is better)
Translates to: HSGTNAKWWLER*RNKQEHRLLCQ
Trigger: CTGGCAGAGCAGCCTGTGTTCTTGCTTGTTACGCCATCTTTCCAGCCACCACTTAGCATTTGTCCCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGCTTGTCCTTACTACTTaGGGGCCACAAAAGACCAGT +
Preference number: 3 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQLVLTT*GPQKTS
Trigger: ACTGGTCTTTTGTGGCCCCAAAGTAGTAAGGACAAG...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCTACCCAAAGGCACATTaGGTAAGCAATAAGAAATGG +
Preference number: 3 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSYPKAH*VSNKKW
Trigger: CCATTTCTTATTGCTTACCAAATGTGCCTTTGGGTA...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 72 bp GGTAACTGTTGGGAGACAGTTCTCTGCTTCCAACACTaGGTTCAGGTTGTAACCCTGGCTGTGAGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: GNCWETVLCFQH*VQVVTLAVSAS
Trigger: AGAGGCACTCACAGCCAGGGTTACAACCTGAACTCAGTGTTGGAAGCAGAGAACTGTCTCCCAACAGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp AGGTTTAGAGAACAAGACACGCAAGGCGTGACCCAGTaGCTCCAATACATTTGCCAACAAGGGGAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: RFREQDTQGVTQ*LQYICQQGERA
Trigger: GGCTCTCTCCCCTTGTTGGCAAATGTATTGGAGTCACTGGGTCACGCCTTGCGTGTCTTGTTCTCTAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp TGGTGTTCCAGAGGATGCCAGGGCCTTGCACTGCTCTaGACTGAGCTAACCTCCAGGCTATCTCATTTAAAA +
Preference number: 3 (lower is better)
Translates to: WCSRGCQGLALL*TELTSRLSHLK
Trigger: TTTTAAATGAGATAGCCTGGAGGTTAGCTCAGTGCAGAGCAGTGCAAGGCCCTGGCATCCTCTGGAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp CTCTGGCTACCCTGCCAATCAAGGCAGCTCAGGCTCTaGACAAATACTTATGTTTTCTTCCCTTTCACCCTC +
Preference number: 3 (lower is better)
Translates to: LWLPCQSRQLRL*TNTYVFFPFTL
Trigger: GAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTGATTGGCAGGGTAGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR GCA 72 bp TTAGTCCTCTTTCTTATGGGGAGGAGAGCTCTCATCTaGAGGATGACCTGGGACTGTGTGGAATGCACAGAT +
Preference number: 3 (lower is better)
Translates to: LVLFLMGRRALI*RMTWDCVECTD
Trigger: ATCTGTGCATTCCACACAGTCCCAGGTCATCCTGCAGATGAGAGCTCTCCTCCCCATAAGAAAGAGGACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp CTCACTGTAAACCTGGCTGGCCTTGAGATCTGCCTCTaGCTCCCTGATAAGACTAAGCACTTAAGCCAATGT +
Preference number: 3 (lower is better)
Translates to: LTVNLAGLEICL*LPDKTKHLSQC
Trigger: ACATTGGCTTAAGTGCTTAGTCTTATCAGGGAGGCAGAGGCAGATCTCAAGGCCAGCCAGGTTTACAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp CTAGAACTCACTGTAAACCTGGCTGGCCTTGAGATCTaGCTCTGCCTCCCTGATAAGACTAAGCACTTAAGC +
Preference number: 3 (lower is better)
Translates to: LELTVNLAGLEI*LCLPDKTKHLS
Trigger: GCTTAAGTGCTTAGTCTTATCAGGGAGGCAGAGGCAGATCTCAAGGCCAGCCAGGTTTACAGTGAGTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp TCTTGGCACCGAGAGCTGCCAGCAGCCACGTGGGGATaGAAGCAGAATATTTGCACATTTAAGTATCGTGTA +
Preference number: 3 (lower is better)
Translates to: SWHRELPAATWG*KQNICTFKYRV
Trigger: TACACGATACTTAAATGTGCAAATATTCTGCTTCCATCCCCACGTGGCTGCTGGCAGCTCTCGGTGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp GTCCATTCTTGGCACCGAGAGCTGCCAGCAGCCACGTaGGGATGGAAGCAGAATATTTGCACATTTAAGTAT +
Preference number: 3 (lower is better)
Translates to: VHSWHRELPAAT*GWKQNICTFKY
Trigger: ATACTTAAATGTGCAAATATTCTGCTTCCATCCCCACGTGGCTGCTGGCAGCTCTCGGTGCCAAGAATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp TCAATTGGTACAAACAGGCTTTCTGTTGTTGAGGTTTTTGGGTTTGCCTGTTTTGGAGCCAGTCCATTCTaGGCACCGAGAGCTGCCAGC +
Preference number: 3 (lower is better)
Translates to: SIGTNRLSVVEVFGFACFGASPF*APRAAS
Trigger: GCTGGCAGCTCTCGGTGCCAAGAATGGACTGGCTCC...AAAACAGGCAAACCCAAAAACCTCAACAACAGAAAGCCTGTTTGTACCAATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp GACCCGGTCATCCCACAGTCACTAATAAAGCTCCACTaGCCCTACCCAAAGGCACATTTGGTAAGCAATAAG +
Preference number: 3 (lower is better)
Translates to: DPVIPQSLIKLH*PYPKAHLVSNK
Trigger: CTTATTGCTTACCAAATGTGCCTTTGGGTAGGGTCAGTGGAGCTTTATTAGTGACTGTGGGATGACCGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CCA 72 bp ATGAATGCTGGGTTTACAGATGTGGCCAGCCACATCTaGTTTTCTATGGTGCTGTGGATAGAACTCAGGGCT +
Preference number: 3 (lower is better)
Translates to: MNAGFTDVASHI*FSMVLWIELRA
Trigger: AGCCCTGAGTTCTATCCACAGCACCATAGAAAACCAGATGTGGCTGGCCACATCTGTAAACCCAGCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp TTAAGTTTAAGTTATTTCAAAGCTGGTGCACAGCTGTaGTCCCCAGTGCTTAGTAGAGGCAGGAGGACCAGC +
Preference number: 3 (lower is better)
Translates to: LSLSYFKAGAQL*SPVLSRGRRTS
Trigger: GCTGGTCCTCCTGCCTCTACTAAGCACTGGGGATCACAGCTGTGCACCAGCTTTGAAATAACTTAAACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp CTTATAACAGTTCTAGAATTTCTGACCAAGGCTGTGTaGGAAAGGTCGGCCCTTCCTAAAACCCTGTTGTGG +
Preference number: 3 (lower is better)
Translates to: LITVLEFLTKAV*ERSALPKTLLW
Trigger: CCACAACAGGGTTTTAGGAAGGGCCGACCTTTCCCACACAGCCTTGGTCAGAAATTCTAGAACTGTTATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp TCAAAGGGGCTAGGACTTTATGAATATGTAGCTCAGTaGTACTGTATGCTTAGTATGCCCAAGGCCCGAGGT +
Preference number: 3 (lower is better)
Translates to: SKGLGLYEYVAQ*YCMLSMPKARG
Trigger: ACCTCGGGCCTTGGGCATACTAAGCATACAGTACCACTGAGCTACATATTCATAAAGTCCTAGCCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp GAGGCAGATAGATCTCTAGAGAGTTTGAGGCCAGCCTaGTCTATAAAGCTATTCCAGGATAGCACAGACACT +
Preference number: 3 (lower is better)
Translates to: EADRSLESLRPA*SIKLFQDSTDT
Trigger: AGTGTCTGTGCTATCCTGGAATAGCTTTATAGACCAGGCTGGCCTCAAACTCTCTAGAGATCTATCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp ATCCCCAGCTCAGAGAGTACTTTCAGGGAGGGATTAAACAAGTTTGAAAAGCTGCCCTGTGGCTACTTGTaGTTTCTGAACACTGAACTG +
Preference number: 3 (lower is better)
Translates to: IPSSESTFREGLNKFEKLPCGYL*FLNTEL
Trigger: CAGTTCAGTGTTCAGAAACAACAAGTAGCCACAGGG...CAGCTTTTCAAACTTGTTTAATCCCTCCCTGAAAGTACTCTCTGAGCTGGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp AAACAAACAGGATGGTCTTCCAGGTCACACTTACCCTaGGTCATGACAACATGTGGCCGTGCTGAACAAAAT +
Preference number: 3 (lower is better)
Translates to: KQTGWSSRSHLP*VMTTCGRAEQN
Trigger: ATTTTGTTCAGCACGGCCACATGTTGTCATGACTCAGGGTAAGTGTGACCTGGAAGACCATCCTGTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 72 bp AGGTATCTGGACCCTTCTTCTGACCTCTACAAGCACTaGACAGATGTAGCACACATCCATGCAGGTAAAACA +
Preference number: 3 (lower is better)
Translates to: RYLDPSSDLYKH*TDVAHIHAGKT
Trigger: TGTTTTACCTGCATGGATGTGTGCTACATCTGTTCAGTGCTTGTAGAGGTCAGAAGAAGGGTCCAGATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp ACCACATGGTGGCTCACAAACATCTATAACATGACCTaGTGCACTCTTCTGGTGTGTCTGAAGACAGTGACA +
Preference number: 3 (lower is better)
Translates to: TTWWLTNIYNMT*CTLLVCLKTVT
Trigger: TGTCACTGTCTTCAGACACACCAGAAGAGTGCATCAGGTCATGTTATAGATGTTTGTGAGCCACCATGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp TTTTATAAGCCTCAAATGACAGTATTAAAAACCCTGTaGGCCACAGGCCTCAGCCAGAAGAAGAGCACAGCT +
Preference number: 3 (lower is better)
Translates to: FYKPQMTVLKTL*ATGLSQKKSTA
Trigger: AGCTGTGCTCTTCTTCTGGCTGAGGCCTGTGGCCCACAGGGTTTTTAATACTGTCATTTGAGGCTTATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp CTCACCTCTGAAAACTTGTCACTGATCAGCTGGATGTaGTTTCTGCCTCTTTTTAGTGGTGTTCCAGAGGAT +
Preference number: 3 (lower is better)
Translates to: LTSENLSLISWM*FLPLFSGVPED
Trigger: ATCCTCTGGAACACCACTAAAAAGAGGCAGAAACCACATCCAGCTGATCAGTGACAAGTTTTCAGAGGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp GTTAACCGAGGACTCCACAGAAGGAAAGCCCTTCTTTaGTCCTATAGGACTAGGTGTGCAGCAATAATATCT +
Preference number: 3 (lower is better)
Translates to: VNRGLHRRKALL*SYRTRCAAIIS
Trigger: AGATATTATTGCTGCACACCTAGTCCTATAGGACCAAAGAAGGGCTTTCCTTCTGTGGAGTCCTCGGTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CCA 72 bp TTGCCTGTTTTGAGGGGCAGGTCCACAGACCTGAGCTaGCTTGTTATTTACTATGTAACTATGGATGACTTC +
Preference number: 3 (lower is better)
Translates to: LPVLRGRSTDLS*LVIYYVTMDDF
Trigger: GAAGTCATCCATAGTTACATAGTAAATAACAAGCCAGCTCAGGTCTGTGGACCTGCCCCTCAAAACAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp CCCCAGTGCTTAGTAGAGGCAGGAGGACCAGCAATTTaGGGCTGGTCAAGGTTATTTTATATAAGAGTATGT +
Preference number: 3 (lower is better)
Translates to: PQCLVEAGGPAI*GWSRLFYIRVC
Trigger: ACATACTCTTATATAAAATAACCTTGACCAGCCTCAAATTGCTGGTCCTCCTGCCTCTACTAAGCACTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp TCTGCTGGTTTTGATAAAAACGCAGTTATTAGCACCTaGCTGCAAAGGGCAGGTTTAGAGAACAAGACACGC +
Preference number: 3 (lower is better)
Translates to: SAGFDKNAVIST*LQRAGLENKTR
Trigger: GCGTGTCTTGTTCTCTAAACCTGCCCTTTGCAGTCAGGTGCTAATAACTGCGTTTTTATCAAAACCAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp ATGCTTAGTATGCCCAAGGCCCGAGGTCAATTTCAATaGCTAAGACTGAAAAGGAAGAAAGAACCTCTCTTC +
Preference number: 3 (lower is better)
Translates to: MLSMPKARGQFQ*LRLKRKKEPLF
Trigger: GAAGAGAGGTTCTTTCTTCCTTTTCAGTCTTAGGCATTGAAATTGACCTCGGGCCTTGGGCATACTAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp AAGCTGACCTCACAGGTAATAAAAAGCAAGAAGGATTaGAAGAGGCGTCACTACTGGAAAATTCAGCCAACC +
Preference number: 3 (lower is better)
Translates to: KLTSQVIKSKKD*KRRHYWKIQPT
Trigger: GGTTGGCTGAATTTTCCAGTAGTGACGCCTCTTTCAATCCTTCTTGCTTTTTATTACCTGTGAGGTCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR GCA 72 bp GTGTGTGTATATGAGTGCTTTGTCTGCATGTATAGCTaGACACCAGAAAAGGACATTGAATCCCATAGGACA +
Preference number: 3 (lower is better)
Translates to: VCVYECFVCMYS*TPEKDIESHRT
Trigger: TGTCCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAAAGCACTCATATACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp TATGAGTGCTTTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCGTCTTAGAAAACACTTaGATCCAGTCACACACAGTG +
Preference number: 3 (lower is better)
Translates to: YECFVCMYSCTPEKDIESVLENT*IQSHTV
Trigger: CACTGTGTGTGACTGGATCAAAGTGTTTTCTAAGAC...GGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAAAGCACTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp ATGTACTCCCTGTGGCTACTTGTTGTTTCTGAACACTaGACTGAAATTCTCACCTCTGAAAACTTGTCACTG +
Preference number: 3 (lower is better)
Translates to: MYSLWLLVVSEH*TEILTSENLSL
Trigger: CAGTGACAAGTTTTCAGAGGTGAGAATTTCAGTTCAGTGTTCAGAAACAACAAGTAGCCACAGGGAGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR TCA 72 bp CAAAATGCCTGTTGGGTGAAATGTAGGGATACACCATaGACTAGCCCGAAAGTTTCAAATGTTTACATTCCC +
Preference number: 3 (lower is better)
Translates to: QNACWVKCRDTP*TSPKVSNVYIP
Trigger: GGGAATGTAAACATTTGAAACTTTCGGGCTAGTTCATGGTGTATCCCTACATTTCACCCAACAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR-3UTR CAA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGATACCCAAAGGCACATTaGGTAAGCAATAAGAAATGG +
Preference number: 3 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGYPKAH*VSNKKW
Trigger: CCATTTCTTATTGCTTACCAAATGTGCCTTTGGGTA...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR TCA 72 bp CATTTGGTAAGCAATAAGAAATGGCTTAGCGTAAGATaGGGATCTTTCAAAATAAACTGTAGACCATCCCCT +
Preference number: 3 (lower is better)
Translates to: HLVSNKKWLSVR*GSFKINCRPSP
Trigger: AGGGGATGGTCTACAGTTTATTTTGAAAGATCCTCATCTTACGCTAAGCCATTTCTTATTGCTTACCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR GCA 72 bp CTTATTTATGTAGTGTGTGTATATGAGTGCTTTGTCTaGATGTATAGCTGCACACCAGAAAAGGACATTGAA +
Preference number: 3 (lower is better)
Translates to: LIYVVCVYECFV*MYSCTPEKDIE
Trigger: TTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAAAGCACTCATATACACACACTACATAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCCGGCTCAGGCTCGACTaGGGCGGCGTCGCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRRLRLD*GGVARQ
Trigger: CTGACGGGCGACGCCGCCGCAGTCGAGCCTGAGCCG...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGCGGCTCAGGCTCGACTaGGGCGGCGTCGCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LSVSLVSPPFTPAAQWGRRLRLD*GGVARQ
Trigger: CTGACGGGCGACGCCGCCGCAGTCGAGCCTGAGCCG...CCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCGCGCGCTTCAGCGCCTaGACGGCCTGGTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRARFSA*TAWSWV
Trigger: CACCCACGACCAGGCCGTGCAGGCGCTGAAGCGCGC...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp GGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGAGCCAGAGCTCTCTCCACCAGCCCCGCTTTaGTGGCCCGCGTCCACACCG +
Preference number: 4 (lower is better)
Translates to: GVSAFHTRSSVGQEPELSPPAPL*WPASTP
Trigger: CGGTGTGGACGCGGGCCACCAAAGCGGGGCTGGTGG...AGAGAGCTCTGGCTCCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCCCAGCCCCGCTTTGGTaGCCCGCGTCCACACCGCCA +
Preference number: 4 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVPAPLW*PASTPP
Trigger: TGGCGGTGTGGACGCGGGCCACCAAAGCGGGGCTGG...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCCGTTCACCGACAGGATaGCGTCGCCCAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSRSPTG*RRPAAA
Trigger: CGCTGCGGCTGGGCGACGCCATCCTGTCGGTGAACG...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCCTAGGGAGACTTCCTTaGTCAGCTCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRLGRLP*SAQQQH
Trigger: ATGCTGCTGCTGAGCTGATCAAGGAAGTCTCCCTAG...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCAGGCCGCCCGCCTCTTaGTTCACCACTCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVRPPAS*FTTRTR
Trigger: CCGAGTGCGAGTGGTGAAGCAAGAGGCGGGCGGCCT...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CTGAGTTCAGGTTGTAACCCTGGCTGTGAGTGCCTCTGCCTGCTGAGACATCTTGCGCGCTTCAGCGCCTaGACGGCCTGGTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSSGCNPGCECLCLLRHLARFSA*TAWSWV
Trigger: CACCCACGACCAGGCCGTGCAGGCGCTGAAGCGCGC...AAGATGTCTCAGCAGGCAGAGGCACTCACAGCCAGGGTTACAACCTGAACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCGGTCCAGCAGTGGTCTaGAGGTCCTCAGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGGPAVV*RSSGRH
Trigger: GTGCCTTCCTGAGGACCTGCAGACCACTGCTGGACC...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS-3UTR CCA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGCGGCCTGGTCGTGGGTaGCCTGGCGCAGGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAERPGRG*PGAGRC
Trigger: GCACCGACCTGCGCCAGGCCACCCACGACCAGGCCG...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGGTAGCTATGACACGGTaGTGCCCAGGCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSVSLVSPPFTPAAQWGRVAMTR*CPGISC
Trigger: ACAAGAGATGCCTGGGCATCACCGTGTCATAGCTAC...CCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGTCCCGCTGTACTGGTTaGACCAAGCATGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: LSVSLVSPPFTPAAQWGRSRCTG*TKHGIE
Trigger: CTCAATGCCATGCTTGGTGCAACCAGTACAGCGGGA...CCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp GGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGAGCCAGAGCTCTCTAGCGGTACAATATGCTaGTGGCGCCTCCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: GVSAFHTRSSVGQEPELSSGTIC*WRLHCL
Trigger: GAGACAATGGAGGCGCCAGCAGCATATTGTACCGCT...AGAGAGCTCTGGCTCCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCAGGCAATATGCTTaGCTTCCTTGCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSARQYA*LPCCLP
Trigger: CGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGC...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCGTCGACAAATCCCGATaGGTTTCAACCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRVDKSR*VSTLKR
Trigger: TCTCTTCAGGGTTGAAACTCATCGGGATTTGTCGAC...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCACTGCCACTAAAGCTTaGAGACTGGGGAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGTATKA*RLGRGT
Trigger: GGTGCCTCTCCCCAGTCTCCAAGCTTTAGTGGCAGT...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCATCAGGCTCTCGCCACTaGGCTCGGCCACCACCCGCA +
Preference number: 4 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTASGSRH*ARPPPA
Trigger: TGCGGGTGGTGGCCGAGCTCAGTGGCGAGAGCCTGA...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGAGGCCGCCCGCCTCTTaGTTCACCACTCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGRPPAS*FTTRTR
Trigger: CCGAGTGCGAGTGGTGAAGCAAGAGGCGGGCGGCCT...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCCAGCTTTGCCTGCTCTaGCAGCCAGGCAATATGCTT +
Preference number: 4 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGQLCLL*QPGNML
Trigger: AAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTG...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCGGCTTTGGACAAGAATaGAGGTCCATAGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRGFGQE*RSIVSS
Trigger: AGAACTGACTATGGACCTGCATTCTTGTCCAAAGCC...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGGCCATTATGTTGGTGTaGATAGCTACGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSVSLVSPPFTPAAQWGRAIMLV*IATNQE
Trigger: CTCCTGGTTCGTAGCTATCCACACCAACATAATGGC...CCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCTGCCTCCCGCTGTACTaGTTGCACCAAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSCLPLY*LHQAWH
Trigger: ATGCCATGCTTGGTGCAACCAGTACAGCGGGAGGCA...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 72 bp GCTGTGTGGGAAAGGTCGGCCCTTCCTAAAACCCTGTaGTGGTCCAGCAGTGGTCTGCAGGTCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVWERSALPKTL*WSSSGLQVLRK
Trigger: CTTCCTGAGGACCTGCAGACCACTGCTGGACCACAACAGGGTTTTAGGAAGGGCCGACCTTTCCCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGGTAGCTATGACACGGTaGTGCCCAGGCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PLKSWTVRHVPWLGRCAVVAMTR*CPGISC
Trigger: ACAAGAGATGCCTGGGCATCACCGTGTCATAGCTAC...CACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp GGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGAGCCAGAGCTCTCTGATGAGTTTCAACCCTaGAGAGATGCATCTCAATGC +
Preference number: 4 (lower is better)
Translates to: GVSAFHTRSSVGQEPELSDEFQP*RDASQC
Trigger: GCATTGAGATGCATCTCTTCAGGGTTGAAACTCATC...AGAGAGCTCTGGCTCCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCGTTCATAGTGGACAGTaGACCTTACCTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGVHSGQ*TLPLGH
Trigger: GTGGCCAAGAGGTAAGGTTCACTGTCCACTATGAAC...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCAGCCAGGCAATATaGTTGACTTCCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSASQAI*LTSLLP
Trigger: AGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGC...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCCCATCCAGCTTTGCCTaGTCTGCCAGCCAGGCAATA +
Preference number: 4 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVPSSFA*SASQAI
Trigger: TATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGG...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp GAGCCCCTTTTGGCTATCTGTTTATGTCCAAAGAGAAACCCAAAGTGCCAGACTTGCACGGCCTGGTCGTaGGTGGCCTGGCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: EPLLAICLCPKRNPKCQTCTAWS*VAWRRS
Trigger: CGACCTGCGCCAGGCCACCCACGACCAGGCCGTGCA...AGTCTGGCACTTTGGGTTTCTCTTTGGACATAAACAGATAGCCAAAAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CCTCTCAAGAGCTGGACTGTACGTCACGTGCCGTGGCTGGGAAGATGTGCAGTGGGTACAATATGCTGCTaGCGCCTCCATTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLKSWTVRHVPWLGRCAVGTICC*RLHCLW
Trigger: CCAGAGACAATGGAGGCGCCAGCAGCATATTGTACC...CACTGCACATCTTCCCAGCCACGGCACGTGACGTACAGTCCAGCTCTTGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp GAGCTGAACCCAGTGCCTGGGGTGCTAAGTGAGGATTaGGGAGGCCGTGATTCCGCAGACCTCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ELNPVPGVLSED*GGRDSADLSFS
Trigger: AGAAAAGCTGAGGTCTGCGGAATCACGGCCTCCCAAATCCTCACTTAGCACCCCAGGCACTGGGTTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGCCATCCAGCTTTGCCTaGTCTGCCAGCCAGGCAATA +
Preference number: 4 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQPSSFA*SASQAI
Trigger: TATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGG...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGAGAGATGCATCTCAATaGCCTGCCGAGAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQRDASQ*PAESLS
Trigger: GGACAGGCTCTCGGCAGGGCATTGAGATGCATCTCT...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTCGTTCACCGACAGGATaGCGTCGCCCAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSRSPTG*RRPAAA
Trigger: CGCTGCGGCTGGGCGACGCCATCCTGTCGGTGAACG...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp TACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTCGGCCTGGTCGTGGGTaGCCTGGCGCAGGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: YLCFLPFHPLPHLKSHIPRPGRG*PGAGRC
Trigger: GCACCGACCTGCGCCAGGCCACCCACGACCAGGCCG...AGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp TTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTGTGTGCACGGCCTGGTCGTaGGTGGCCTGGCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LCFLPFHPLPHLKSHIPVCTAWS*VAWRRS
Trigger: CGACCTGCGCCAGGCCACCCACGACCAGGCCGTGCA...CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp AGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTACTGCTATAGCTCTGCTTTCTGCGGAAGATCTTGGAGATaGGGATCGGCATCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSVGQEPELSYCYSSAFCGRSWR*GSASGS
Trigger: AGAACCGGATGCCGATCCTCATCTCCAAGATCTTCC...GCAGAAAGCAGAGCTATAGCAGTAAGAGAGCTCTGGCTCCTGCCCCACTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGGCCAGGCAATATGCTTaGCTTCCTTGCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAEARQYA*LPCCLP
Trigger: CGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGC...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGTACGAACCAGGAGTGTaGTGTGGCCGTATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQYEPGV*CGRILA
Trigger: TGCAAGGATACGGCCACAGCACACTCCTGGTTCGTA...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCATCCACCATCCAGCTTTaGCTGCTCTGCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTASTIQL*LLCQPG
Trigger: GCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGA...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp AGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTACTGCTATAGCTCTGCTTTCTGCCTTGGCCACTTAAGGTaGAGCCTAGGGAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: SSVGQEPELSYCYSSAFCLGHLR*SLGRLP
Trigger: AGGAAGTCTCCCTAGGCTGCACCTTAAGTGGCCAAG...GCAGAAAGCAGAGCTATAGCAGTAAGAGAGCTCTGGCTCCTGCCCCACTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp TTGTCTGCATGTATAGCTGCACACCAGAAAAGGACATTGAATCCCATAGGACAACCAGCCCCGCTTTGGTaGCCCGCGTCCACACCGCCA +
Preference number: 4 (lower is better)
Translates to: LSACIAAHQKRTLNPIGQPAPLW*PASTPP
Trigger: TGGCGGTGTGGACGCGGGCCACCAAAGCGGGGCTGG...TTGTCCTATGGGATTCAATGTCCTTTTCTGGTGTGCAGCTATACATGCAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGCTAAAGCTTGGAGACTaGGGAGAGGCACCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQLKLGD*GEAPSH
Trigger: ATGGGAAGGTGCCTCTCCCCAGTCTCCAAGCTTTAG...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CTGAGTTCAGGTTGTAACCCTGGCTGTGAGTGCCTCTGCCTGCTGAGACATCTTACTGCCACTAAAGCTTaGAGACTGGGGAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LSSGCNPGCECLCLLRHLTATKA*RLGRGT
Trigger: GGTGCCTCTCCCCAGTCTCCAAGCTTTAGTGGCAGT...AAGATGTCTCAGCAGGCAGAGGCACTCACAGCCAGGGTTACAACCTGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp CTCCTTCCATTTCTTCATTCCTTCAGCCCCCTGGACTaGGGTGCTGAGATCTGCTCGGCAGTCCTCATGACA +
Preference number: 4 (lower is better)
Translates to: LLPFLHSFSPLD*GAEICSAVLMT
Trigger: TGTCATGAGGACTGCCGAGCAGATCTCAGCACCCAAGTCCAGGGGGCTGAAGGAATGAAGAAATGGAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CCCTTTTGGCTATCTGTTTATGTCCAAAGAGAAACCCAAAGTGCCAGACTTCATTCAGGCTCTCGCCACTaGGCTCGGCCACCACCCGCA +
Preference number: 4 (lower is better)
Translates to: PFWLSVYVQRETQSARLHSGSRH*ARPPPA
Trigger: TGCGGGTGGTGGCCGAGCTCAGTGGCGAGAGCCTGA...ATGAAGTCTGGCACTTTGGGTTTCTCTTTGGACATAAACAGATAGCCAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp TTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTGTGCCTGGCGCAGGTCGGTaGCGTTCACCGACAGGATGG +
Preference number: 4 (lower is better)
Translates to: LCFLPFHPLPHLKSHIPVPGAGR*RSPTGW
Trigger: CCATCCTGTCGGTGAACGGCACCGACCTGCGCCAGG...CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGTGCATCTCAATGCCCTaGCGAGAGCCTGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGCISMP*REPVLV
Trigger: TACCAGGACAGGCTCTCGGCAGGGCATTGAGATGCA...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp AGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTACTGCTATAGCTCTGCTTTCTGCCCTTCCTGTCCTTGGTaGTGTTCTGATGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSVGQEPELSYCYSSAFCPSCPW*CSDALE
Trigger: CTCCAAAGCATCAGAACACCACCAAGGACAGGAAGG...GCAGAAAGCAGAGCTATAGCAGTAAGAGAGCTCTGGCTCCTGCCCCACTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp AGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTACTGCTATAGCTCTGCTTTCTGCTCTGTTCTCCAGATCTaGCATGCTCAGGTTTCGAGC +
Preference number: 4 (lower is better)
Translates to: SSVGQEPELSYCYSSAFCSVLQI*HAQVSS
Trigger: GCTCGAAACCTGAGCATGCCAGATCTGGAGAACAGA...GCAGAAAGCAGAGCTATAGCAGTAAGAGAGCTCTGGCTCCTGCCCCACTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGACCAGGAGTGTGCTGTaGCCGTATCCTTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGTRSVL*PYPCSV
Trigger: TACGCTGCAAGGATACGGCCACAGCACACTCCTGGT...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp GTCACAAGGATATGGAGGCAAAGTCAGCGCAAGGCTGAGGTGAGAAGTCTAACCACCAGGAGTGTGCTGTaGCCGTATCCTTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: VTRIWRQSQRKAEVRSLTTRSVL*PYPCSV
Trigger: TACGCTGCAAGGATACGGCCACAGCACACTCCTGGT...GGTTAGACTTCTCACCTCAGCCTTGCGCTGACTTTGCCTCCATATCCTTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGGTTGTGGTCCAGCAGTaGTCTGCAGGTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGVVVQQ*SAGPQE
Trigger: TTCCTGAGGACCTGCAGACCACTGCTGGACCACAAC...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
3UTR CAA 72 bp TTAACCTTGAGCTGGAGGCGACTTGTCCTTACTACTTaGGGGCCACAAAAGACCAGTGCCAGGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LTLSWRRLVLTT*GPQKTSARTSP
Trigger: AGGAGAGGTCCTGGCACTGGTCTTTTGTGGCCCCAAAGTAGTAAGGACAAGTCGCCTCCAGCTCAAGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGGGAAGATCTTGGAGATaGGGATCGGCATCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAEGRSWR*GSASGS
Trigger: AGAACCGGATGCCGATCCTCATCTCCAAGATCTTCC...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCACACCAAGCATGGCATTaGGCTCAGCCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTAHQAWH*AQPVPV
Trigger: CACAGGTACTGGCTGAGCTCAATGCCATGCTTGGTG...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCATCTCAGTCACAGCCATaGGAACAGGCCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTASQSQP*EQASTA
Trigger: AGCAGTGGAGGCCTGTTCTCATGGCTGTGACTGAGA...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTCTCAGGAAGGCACTGTaGTGGAGGCAGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSLRKAL*WRQEQG
Trigger: CCCTTGCTCCTGCCTCCATCACAGTGCCTTCCTGAG...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS-3UTR GCA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGTCCCGCTGTACTGGTTaGACCAAGCATGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAESRCTG*TKHGIE
Trigger: CTCAATGCCATGCTTGGTGCAACCAGTACAGCGGGA...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCTGGAAATACTTCTTGTaGCAGTCAAAGCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGWKYFL*QSKLFL
Trigger: AAGAAAGAGCTTTGACTGTCACAAGAAGTATTTCCA...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS-3UTR CCA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGTCTGTTCTCCAGATCTaGCATGCTCAGGTTTCGAGC +
Preference number: 4 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAESVLQI*HAQVSS
Trigger: GCTCGAAACCTGAGCATGCCAGATCTGGAGAACAGA...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGGTGAACCTTACCTCTTaGCCACTTAAGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAEVNLTS*PLKVQP
Trigger: AGGCTGCACCTTAAGTGGCCAAGAGGTAAGGTTCAC...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp GGCTTTCTGTTGTTGAGGTTTTTGGGTTTGCCTGTTTaGAGGGGCAGGTCCACAGACCTGAGCTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GFLLLRFLGLPV*RGRSTDLSWLV
Trigger: AACAAGCCAGCTCAGGTCTGTGGACCTGCCCCTCAAAACAGGCAAACCCAAAAACCTCAACAACAGAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTTCTCAGTCACAGCCATaGGAACAGGCCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSSQSQP*EQASTA
Trigger: AGCAGTGGAGGCCTGTTCTCATGGCTGTGACTGAGA...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGAGATCAAGGTGTTCCTaGTATCAGGAGAATGTAGCT +
Preference number: 4 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQRSRCS*YQENVA
Trigger: AGCTACATTCTCCTGATAGCAGGAACACCTTGATCT...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTTGCATCTCAATGCCCTaGCGAGAGCCTGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSCISMP*REPVLV
Trigger: TACCAGGACAGGCTCTCGGCAGGGCATTGAGATGCA...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 72 bp GGCTGCTACAGCTTCTGGAACAAGCAGCTTAGGACCTaGCTCTTGGTGCTCCTAATGACAACAAAATCACCC +
Preference number: 4 (lower is better)
Translates to: GCYSFWNKQLRT*LLVLLMTTKSP
Trigger: GGGTGATTTTGTTGTCATTAGGAGCACCAAGAGCAAGGTCCTAAGCTGCTTGTTCCAGAAGCTGTAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp TTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTGTGGCAGCATGGCAGCCCTaGACAAGTATTCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LCFLPFHPLPHLKSHIPVAAWQP*TSILVQ
Trigger: CTGGACCAGAATACTTGTTCAGGGCTGCCATGCTGC...CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp GAGCCCCTTTTGGCTATCTGTTTATGTCCAAAGAGAAACCCAAAGTGCCAGACTTACGAACCAGGAGTGTaGTGTGGCCGTATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: EPLLAICLCPKRNPKCQTYEPGV*CGRILA
Trigger: TGCAAGGATACGGCCACAGCACACTCCTGGTTCGTA...AGTCTGGCACTTTGGGTTTCTCTTTGGACATAAACAGATAGCCAAAAGGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp AGAAAGCAACACTCCTCTTTCCGGGCAGCATTTCCAACTTGCTTTTCAACTTGGGCCAGCCAGGCAATATaGTTGACTTCCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RKQHSSFRAAFPTCFSTWASQAI*LTSLLP
Trigger: AGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGC...CCAAGTTGAAAAGCAAGTTGGAAATGCTGCCCGGAAAGAGGAGTGTTGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTCAGCTTTGCCTGCTCTaGCAGCCAGGCAATATGCTT +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSQLCLL*QPGNML
Trigger: AAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTG...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGCCATTATGTTGGTGTaGATAGCTACGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTAAIMLV*IATNQE
Trigger: CTCCTGGTTCGTAGCTATCCACACCAACATAATGGC...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCACCTGAACAAGTATTCTaGTCCAGGTCGACAAATCCC +
Preference number: 4 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTAPEQVF*SRSTNP
Trigger: GGGATTTGTCGACCTGGACCAGAATACTTGTTCAGG...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CTGAGTTCAGGTTGTAACCCTGGCTGTGAGTGCCTCTGCCTGCTGAGACATCTTCCAAATAGAGATTTCTaGTTCCATCATCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: LSSGCNPGCECLCLLRHLPNRDF*FHHQQT
Trigger: TGTCTGCTGATGATGGAATCAGAAATCTCTATTTGG...AAGATGTCTCAGCAGGCAGAGGCACTCACAGCCAGGGTTACAACCTGAACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTTCTCCAGATCTGGCATaGTCAGGTTTCGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSSPDLA*SGFEQQ
Trigger: TTGCTGCTCGAAACCTGAGCATGCCAGATCTGGAGA...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGATCCACCATCCAGCTTTaGCTGCTCTGCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGSTIQL*LLCQPG
Trigger: GCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGA...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp TACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTAGAGATGCATCTCAATaGCCTGCCGAGAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: YLCFLPFHPLPHLKSHIPRDASQ*PAESLS
Trigger: GGACAGGCTCTCGGCAGGGCATTGAGATGCATCTCT...AGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTTCAACCCTGAAGAGATaGATCTCAATGCCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSSTLKR*ISMPCR
Trigger: TCGGCAGGGCATTGAGATGCATCTCTTCAGGGTTGA...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTGGTTTCTTGATATATaGTGTTACTTCTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVWFLDI*CYFSDE
Trigger: TTCATCCGAGAAGTAACACCATATATCAAGAAACCA...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp TACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTTGCCTCCCGCTGTACTaGTTGCACCAAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: YLCFLPFHPLPHLKSHIPCLPLY*LHQAWH
Trigger: ATGCCATGCTTGGTGCAACCAGTACAGCGGGAGGCA...AGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp TACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTCTAGGGAGACTTCCTTaGTCAGCTCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: YLCFLPFHPLPHLKSHIPLGRLP*SAQQQH
Trigger: ATGCTGCTGCTGAGCTGATCAAGGAAGTCTCCCTAG...AGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAAGATCAAGGTGTTCCTaGTATCAGGAGAATGTAGCT +
Preference number: 4 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTARSRCS*YQENVA
Trigger: AGCTACATTCTCCTGATAGCAGGAACACCTTGATCT...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTCTCTTTCTTCACTCTTaGTGCTCACACAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSLFLHS*CSHKQS
Trigger: GGACTGCTTGTGTGAGCAGCAAGAGTGAAGAAAGAG...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS-3UTR GCA 90 bp ATCCCCAGCTCAGAGAGTACTTTCAGGGAGGGATTAAACAAGTTTGAAAAGCTGGATAGCGGTACAATATaGTGCTGGCGCCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: IPSSESTFREGLNKFEKLDSGTI*CWRLHC
Trigger: ACAATGGAGGCGCCAGCAGCATATTGTACCGCTATC...CAGCTTTTCAAACTTGTTTAATCCCTCCCTGAAAGTACTCTCTGAGCTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGTGGTTTCTTGATATATaGTGTTACTTCTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQWFLDI*CYFSDE
Trigger: TTCATCCGAGAAGTAACACCATATATCAAGAAACCA...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTCCTGAACAAGTATTCTaGTCCAGGTCGACAAATCCC +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSPEQVF*SRSTNP
Trigger: GGGATTTGTCGACCTGGACCAGAATACTTGTTCAGG...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGAGCAGCATGGCAGCCCTaGACAAGTATTCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGAAWQP*TSILVQ
Trigger: CTGGACCAGAATACTTGTTCAGGGCTGCCATGCTGC...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CCCTTTTGGCTATCTGTTTATGTCCAAAGAGAAACCCAAAGTGCCAGACTTCATTCTCCAGATCTGGCATaGTCAGGTTTCGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PFWLSVYVQRETQSARLHSPDLA*SGFEQQ
Trigger: TTGCTGCTCGAAACCTGAGCATGCCAGATCTGGAGA...ATGAAGTCTGGCACTTTGGGTTTCTCTTTGGACATAAACAGATAGCCAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp ATACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCCCTTCCTGTCCTTGGTaGTGTTCTGATGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: ILMFSSLSPSTPFEEPYPPSCPW*CSDALE
Trigger: CTCCAAAGCATCAGAACACCACCAAGGACAGGAAGG...GGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 72 bp TACAGCTTCTGGAACAAGCAGCTTAGGACCTTGCTCTaGGTGCTCCTAATGACAACAAAATCACCCATAAGC +
Preference number: 4 (lower is better)
Translates to: YSFWNKQLRTLL*VLLMTTKSPIS
Trigger: GCTTATGGGTGATTTTGTTGTCATTAGGAGCACCAAGAGCAAGGTCCTAAGCTGCTTGTTCCAGAAGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp CCAACTTCCTTAACATGTTTAGGTGATCTTCTCATGTaGCCACGGGCAGAGCCTGAATATGCCTTCACACAA +
Preference number: 4 (lower is better)
Translates to: PTSLTCLGDLLM*PRAEPEYAFTQ
Trigger: TTGTGTGAAGGCATATTCAGGCTCTGCCCGTGGCAACATGAGAAGATCACCTAAACATGTTAAGGAAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp CCTGGCTCACTTTCTCTAGGTCTCTTTCCACTGAGTTaGAACGCCAACGGGTTCTTGAGTAAGCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: PGSLSLGLFPLS*NANGFLSKQKN
Trigger: ATTTTTCTGCTTACTCAAGAACCCGTTGGCGTTCAAACTCAGTGGAAAGAGACCTAGAGAAAGTGAGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTCTCTTGTCCAAGGCATaGAGTCATAAAGTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSLLSKA*SHKVAS
Trigger: ACTTGCTACTTTATGACTGCATGCCTTGGACAAGAG...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp TTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTGTGTTTCTTCACTCTTGCTaGTCACACAAGCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LCFLPFHPLPHLKSHIPVFLHSC*SHKQSH
Trigger: ATGGGACTGCTTGTGTGAGCAGCAAGAGTGAAGAAA...CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS-3UTR CCA 90 bp TCAATTGGTACAAACAGGCTTTCTGTTGTTGAGGTTTTTGGGTTTGCCTGTTTTCTAAAGCTTGGAGACTaGGGAGAGGCACCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SIGTNRLSVVEVFGFACFLKLGD*GEAPSH
Trigger: ATGGGAAGGTGCCTCTCCCCAGTCTCCAAGCTTTAG...AAAACAGGCAAACCCAAAAACCTCAACAACAGAAAGCCTGTTTGTACCAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp TCCCCAGTGCTTAGTAGAGGCAGGAGGACCAGCAATTaGAGGCTGGTCAAGGTTATTTTATATAAGAGTATG +
Preference number: 4 (lower is better)
Translates to: SPVLSRGRRTSN*RLVKVILYKSM
Trigger: CATACTCTTATATAAAATAACCTTGACCAGCCTCAAATTGCTGGTCCTCCTGCCTCTACTAAGCACTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp ATCCCCAGCTCAGAGAGTACTTTCAGGGAGGGATTAAACAAGTTTGAAAAGCTGCTCTTGTCCAAGGCATaGAGTCATAAAGTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: IPSSESTFREGLNKFEKLLLSKA*SHKVAS
Trigger: ACTTGCTACTTTATGACTGCATGCCTTGGACAAGAG...CAGCTTTTCAAACTTGTTTAATCCCTCCCTGAAAGTACTCTCTGAGCTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR GCA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGATCAACCCTGAAGAGATaGATCTCAATGCCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGSTLKR*ISMPCR
Trigger: TCGGCAGGGCATTGAGATGCATCTCTTCAGGGTTGA...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 72 bp CGAAAGTTTCAAATGTTTACATTCCCAGAGAATCTTTaGGGTATCTACAGTCCTCTGTGGCTTCGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RKFQMFTFPENL*GIYSPLWLRKG
Trigger: ACCCTTCCGAAGCCACAGAGGACTGTAGATACCCAAAAGATTCTCTGGGAATGTAAACATTTGAAACTTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp CTCCAACCACTGAGTGACCTTGCCACACCTGGACTCTaGCTAATTTTTAATGCAATGTGGTTGCTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: LQPLSDLATPGL*LIFNAMWLLVN
Trigger: ATTAACAAGCAACCACATTGCATTAAAAATTAGCAAGAGTCCAGGTGTGGCAAGGTCACTCAGTGGTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGAGTCGACAAATCCCGATaGGTTTCAACCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGVDKSR*VSTLKR
Trigger: TCTCTTCAGGGTTGAAACTCATCGGGATTTGTCGAC...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 72 bp GGTCTCTTTCCACTGAGTTTGAACGCCAACGGGTTCTaGAGTAAGCAGAAAAATGCTAATTTTCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: GLFPLSLNANGF*SKQKNANFQDL
Trigger: TAAGTCCTGAAAATTAGCATTTTTCTGCTTACTCAAGAACCCGTTGGCGTTCAAACTCAGTGGAAAGAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
3UTR CAA 72 bp AAAGCTGACCTCACAGGTAATAAAAAGCAAGAAGGATaGAAAGAGGCGTCACTACTGGAAAATTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: KADLTGNKKQEG*KEASLLENSAN
Trigger: GTTGGCTGAATTTTCCAGTAGTGACGCCTCTTTCAATCCTTCTTGCTTTTTATTACCTGTGAGGTCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR TCA 90 bp CAATGCTATATGTCGATGTGCAACTCAAGGGAAGTGTTGTCTAAGCATCTATATGATGAGTTTCAACCCTaGAGAGATGCATCTCAATGC +
Preference number: 4 (lower is better)
Translates to: QCYMSMCNSREVLSKHLYDEFQP*RDASQC
Trigger: GCATTGAGATGCATCTCTTCAGGGTTGAAACTCATC...ATATAGATGCTTAGACAACACTTCCCTTGAGTTGCACATCGACATATAGCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp CCCTTTTGGCTATCTGTTTATGTCCAAAGAGAAACCCAAAGTGCCAGACTTCATAAATACAATCGGCTTTaGACAAGAATGCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PFWLSVYVQRETQSARLHKYNRL*TRMQVH
Trigger: ATGGACCTGCATTCTTGTCCAAAGCCGATTGTATTT...ATGAAGTCTGGCACTTTGGGTTTCTCTTTGGACATAAACAGATAGCCAAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CCA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGAAAATACAATCGGCTTTaGACAAGAATGCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGKYNRL*TRMQVH
Trigger: ATGGACCTGCATTCTTGTCCAAAGCCGATTGTATTT...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 72 bp CAAATGATTCCTACACAAAGAAAAGAAGAGCCCCTTTaGGCTATCTGTTTATGTCCAAAGAGAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: QMIPTQRKEEPL*AICLCPKRNPK
Trigger: CTTTGGGTTTCTCTTTGGACATAAACAGATAGCCAAAAGGGGCTCTTCTTTTCTTTGTGTAGGAATCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
3UTR CAA 72 bp TTTCCTTTTTGTTCAGATTCGGGAGCTGTGCTAATCTaGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: FPFCSDSGAVLI*RFYVECFRRNK
Trigger: TTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCTCCCGAATCTGAACAAAAAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 90 bp GCTCGACTGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCGCCACTaGGCTCGGCCACCACCCGCACCCAGCGCTCCCTTAGAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: ARLRRRRPSGSGSRH*ARPPPAPSAPLEAA
Trigger: AGCTGCTTCTAAGGGAGCGCTGGGTGCGGGTGGTGGCCGAGCTCAGTGGCGAGAGCCTGAGCCTGACGGGCGACGCCGCCGCAGTCGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCCAGGCCGCCCGCCTCTaGCTTCACCACTCGCACTCG +
Preference number: 5 (lower is better)
Translates to: QGAEAPVSLPGVSAFHTRQAARL*LHHSHS
Trigger: CGAGTGCGAGTGGTGAAGCAAGAGGCGGGCGGCCTG...GCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTCCACCAGCCCCGCTTaGGTGGCCCGCGTCCACACC +
Preference number: 5 (lower is better)
Translates to: LLRNRGQRLLSVSLVSPPSTSPA*VARVHT
Trigger: GGTGTGGACGCGGGCCACCAAAGCGGGGCTGGTGGA...AGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp AGCTCAGTGGGGCAGGAGCCAGAGCTCTCTTACTGCTATAGCTCTGCTTTCTGCTCCACCAGCCCCGCTTaGGTGGCCCGCGTCCACACC +
Preference number: 5 (lower is better)
Translates to: SSVGQEPELSYCYSSAFCSTSPA*VARVHT
Trigger: GGTGTGGACGCGGGCCACCAAAGCGGGGCTGGTGGA...GCAGAAAGCAGAGCTATAGCAGTAAGAGAGCTCTGGCTCCTGCCCCACTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGTCCACCATCCAGCTTaGCCTGCTCTGCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSVHHPA*PALPAR
Trigger: CCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGAC...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CTGAGTTCAGGTTGTAACCCTGGCTGTGAGTGCCTCTGCCTGCTGAGACATCTTCAGGCCGCCCGCCTCTaGCTTCACCACTCGCACTCG +
Preference number: 5 (lower is better)
Translates to: LSSGCNPGCECLCLLRHLQAARL*LHHSHS
Trigger: CGAGTGCGAGTGGTGAAGCAAGAGGCGGGCGGCCTG...AAGATGTCTCAGCAGGCAGAGGCACTCACAGCCAGGGTTACAACCTGAACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCAGCCCCGGGAAGATCTaGGAGATGAGGATCGGCATC +
Preference number: 5 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGSPGKI*EMRIGI
Trigger: GATGCCGATCCTCATCTCCAAGATCTTCCCGGGGCT...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CTGTCAGTCTCCCTGGTGTCTCCGCCTTTCACACCCGCAGCTCAGTGGGGCAGGACTTCTCGGATGAATTaGACCTCCAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LSVSLVSPPFTPAAQWGRTSRMN*TSSSTS
Trigger: GGAGGTGCTGCTGGAGGTCAAATTCATCCGAGAAGT...CCTGCCCCACTGAGCTGCGGGTGTGAAAGGCGGAGACACCAGGGAGACTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 90 bp AACAGGCCTCCACTGCTGTCGTCCACCATCCAGCTTTGCCTGCTCTaGCAGCCAGGCAATATGCTTGACTTCCTTGCTGCCTCCCGCTGT +
Preference number: 5 (lower is better)
Translates to: NRPPLLSSTIQLCLL*QPGNMLDFLAASRC
Trigger: ACAGCGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGACGACAGCAGTGGAGGCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 90 bp GTCCACCATCCAGCTTTGCCTGCTCTGCCAGCCAGGCAATATGCTTaGCTTCCTTGCTGCCTCCCGCTGTACTGGTTGCACCAAGCATGG +
Preference number: 5 (lower is better)
Translates to: VHHPALPALPARQYA*LPCCLPLYWLHQAW
Trigger: CCATGCTTGGTGCAACCAGTACAGCGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 90 bp TGTCGTCCACCATCCAGCTTTGCCTGCTCTGCCAGCCAGGCAATATaGTTGACTTCCTTGCTGCCTCCCGCTGTACTGGTTGCACCAAGC +
Preference number: 5 (lower is better)
Translates to: CRPPSSFACSASQAI*LTSLLPPAVLVAPS
Trigger: GCTTGGTGCAACCAGTACAGCGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGACGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 90 bp AGCCATGAGAACAGGCCTCCACTGCTGTCGTCCACCATCCAGCTTTaGCTGCTCTGCCAGCCAGGCAATATGCTTGACTTCCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHENRPPLLSSTIQL*LLCQPGNMLDFLAA
Trigger: GGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGACGACAGCAGTGGAGGCCTGTTCTCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 90 bp AGTAGCAAGTCCTTCTCAGTCACAGCCATGAGAACAGGCCTCCACTaGTGTCGTCCACCATCCAGCTTTGCCTGCTCTGCCAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SSKSFSVTAMRTGLH*CRPPSSFACSASQA
Trigger: TGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGACGACAGCAGTGGAGGCCTGTTCTCATGGCTGTGACTGAGAAGGACTTGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp AGACCAGTGCCAGGACCTCTCCTAGCCCCCGTGCTCTGTGTCACTCAAAACGGCATGCCCAGGCATCTCTaGTCCAAGGCATGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: RPVPGPLLAPVLCVTQNGMPRHL*SKACSH
Trigger: ATGACTGCATGCCTTGGACAAGAGATGCCTGGGCAT...GCCGTTTTGAGTGACACAGAGCACGGGGGCTAGGAGAGGTCCTGGCACTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCGCCTTCTAGGGAGACTTCCTaGATCAGCTCAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LLRNRGQRLLSVSLVSPPSRETS*ISSAAA
Trigger: TGCTGCTGCTGAGCTGATCAAGGAAGTCTCCCTAGA...AGGCGGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS-3UTR CAA 90 bp TACAGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCAGCCAGGCAATATGCTaGACTTCCTTGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: YSSSKEQGAEAPVSLPGVSQAIC*TSLLPP
Trigger: GGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCT...GACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 90 bp CTTCCTTGCTGCCTCCCGCTGTACTGGTTGCACCAAGCATGGCATTaGGCTCAGCCAGTACCTGTGGGAGGAGAGCCATTATGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LPCCLPLYWLHQAWH*AQPVPVGGEPLCWC
Trigger: ACACCAACATAATGGCTCTCCTCCCACAGGTACTGGCTGAGCTCAATGCCATGCTTGGTGCAACCAGTACAGCGGGAGGCAGCAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CCA 90 bp TTGAGCTCAGCCAGTACCTGTGGGAGGAGAGCCATTATGTTGGTGTaGATAGCTACGAACCAGGAGTGTGCTGTGGCCGTATCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LSSASTCGRRAIMLV*IATNQECAVAVSLQ
Trigger: CTGCAAGGATACGGCCACAGCACACTCCTGGTTCGTAGCTATCCACACCAACATAATGGCTCTCCTCCCACAGGTACTGGCTGAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGAGCCCCGGGAAGATCTaGGAGATGAGGATCGGCATC +
Preference number: 5 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGSPGKI*EMRIGI
Trigger: GATGCCGATCCTCATCTCCAAGATCTTCCCGGGGCT...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp AGCTCTTCTAAGGAACAGGGGGCAGAGGCTCCTGTCAGTCTCCCTGGTGTCTCCAGGAGAGCCATTATGTaGGTGTGGATAGCTACGAAC +
Preference number: 5 (lower is better)
Translates to: SSSKEQGAEAPVSLPGVSRRAIM*VWIATN
Trigger: GTTCGTAGCTATCCACACCAACATAATGGCTCTCCT...GGAGACACCAGGGAGACTGACAGGAGCCTCTGCCCCCTGTTCCTTAGAAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp GCCGTGCTGAACAAAATGCAGGTGACTACCATGGTCTCGCTCTCATCGTCCCAGATGCCCAGGCATCTCTaGTCCAAGGCATGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: AVLNKMQVTTMVSLSSSQMPRHL*SKACSH
Trigger: ATGACTGCATGCCTTGGACAAGAGATGCCTGGGCAT...CTGGGACGATGAGAGCGAGACCATGGTAGTCACCTGCATTTTGTTCAGCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CCCTTTTGGCTATCTGTTTATGTCCAAAGAGAAACCCAAAGTGCCAGACTTCATTTCTCGCGGCCGCCCTaGATGCTGATGCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PFWLSVYVQRETQSARLHFSRPP*MLMPRP
Trigger: CGGCCTGGGCATCAGCATCAAGGGCGGCCGCGAGAA...ATGAAGTCTGGCACTTTGGGTTTCTCTTTGGACATAAACAGATAGCCAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGGCACCAAGCATGGCATaGAGCTCAGCCAGTACCTGT +
Preference number: 5 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGAPSMA*SSASTC
Trigger: ACAGGTACTGGCTGAGCTCAATGCCATGCTTGGTGC...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGCCTAGGGAGACTTCCTaGATCAGCTCAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAEPRETS*ISSAAA
Trigger: TGCTGCTGCTGAGCTGATCAAGGAAGTCTCCCTAGG...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS TCA 90 bp AAGGCATGCAGTCATAAAGTAGCAAGTCCTTCTCAGTCACAGCCATaGGAACAGGCCTCCACTGCTGTCGTCCACCATCCAGCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: KACSHKVASPSQSQP*EQASTAVVHHPALP
Trigger: AGGCAAAGCTGGATGGTGGACGACAGCAGTGGAGGCCTGTTCTCATGGCTGTGACTGAGAAGGACTTGCTACTTTATGACTGCATGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp TCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGAGACTTCTCGGATGAATTaGACCTCCAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: SGLRLSPQPLGTVSLTAETSRMN*TSSSTS
Trigger: GGAGGTGCTGCTGGAGGTCAAATTCATCCGAGAAGT...CTCTGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp TTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTGTGGTCCACCATCCAGCTTaGCCTGCTCTGCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LCFLPFHPLPHLKSHIPVVHHPA*PALPAR
Trigger: CCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGAC...CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CCA 90 bp TGCTTTGGAGAGCCAGAGTCTTCACTGCCACTAAAGCTTGGAGACTaGGGAGAGGCACCTTCCCATGGCAGATCTGATACTAAAGATGGT +
Preference number: 5 (lower is better)
Translates to: CFGEPESSLPLKLGD*GEAPSHGRSDTKDG
Trigger: ACCATCTTTAGTATCAGATCTGCCATGGGAAGGTGCCTCTCCCCAGTCTCCAAGCTTTAGTGGCAGTGAAGACTCTGGCTCTCCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CAGCCAGAAGAAGAGCACAGCTTACCCACTTACAGCTCTTCTAAGGAACAGGGGCTGAATGAACCAACCTaGTGGCAACAAGAGGGTAGC +
Preference number: 5 (lower is better)
Translates to: QPEEEHSLPTYSSSKEQGLNEPT*WQQEGS
Trigger: GCTACCCTCTTGTTGCCACAAGGTTGGTTCATTCAG...CCCCTGTTCCTTAGAAGAGCTGTAAGTGGGTAAGCTGTGCTCTTCTTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp ATCTCAGGGTTAAGACTTTCTCCCCAGCCTCTGGGTACTGTTAGTCTGACTGCAGCTCTTTCTTCACTCTaGCTGCTCACACAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: ISGLRLSPQPLGTVSLTAALSSL*LLTQAV
Trigger: GACTGCTTGTGTGAGCAGCAAGAGTGAAGAAAGAGC...TGCAGTCAGACTAACAGTACCCAGAGGCTGGGGAGAAAGTCTTAACCCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS TCA 90 bp AAGCACATTTTGAGAGGGATGACCTTCCTGTCCTTGGTGGTGTTCTaGTGCTTTGGAGAGCCAGAGTCTTCACTGCCACTAAAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: KHILRGMTFLSLVVF*CFGEPESSLPLKLG
Trigger: TCCAAGCTTTAGTGGCAGTGAAGACTCTGGCTCTCCAAAGCATCAGAACACCACCAAGGACAGGAAGGTCATCCCTCTCAAAATGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp ATCCCCAGCTCAGAGAGTACTTTCAGGGAGGGATTAAACAAGTTTGAAAAGCTGGCACCAAGCATGGCATaGAGCTCAGCCAGTACCTGT +
Preference number: 5 (lower is better)
Translates to: IPSSESTFREGLNKFEKLAPSMA*SSASTC
Trigger: ACAGGTACTGGCTGAGCTCAATGCCATGCTTGGTGC...CAGCTTTTCAAACTTGTTTAATCCCTCCCTGAAAGTACTCTCTGAGCTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS TCA 90 bp GCTCTTTCTTCACTCTTGCTGCTCACACAAGCAGTCCCATGCGAGTaGCTTTGGCGGATAAGAACGTGTGCAATACAAATACAATCGGCT +
Preference number: 5 (lower is better)
Translates to: ALSSLLLLTQAVPCE*LWRIRTCAIQIQSA
Trigger: AGCCGATTGTATTTGTATTGCACACGTTCTTATCCGCCAAAGTCACTCGCATGGGACTGCTTGTGTGAGCAGCAAGAGTGAAGAAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS GCA 90 bp AGTGTGCTGTGGCCGTATCCTTGCAGCGTAAGATCAAGGTGTTCCTaGTATCAGGAGAATGTAGCTCTATCAATCTGTTCTCCAGATCTG +
Preference number: 5 (lower is better)
Translates to: SVLWPYPCSVRSRCS*YQENVALSICSPDL
Trigger: CAGATCTGGAGAACAGATTGATAGAGCTACATTCTCCTGATAGCAGGAACACCTTGATCTTACGCTGCAAGGATACGGCCACAGCACACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CTTTCATTTGGAGCTTATAACAGTTCTAGAATTTCTGACCAAGGCTGTGTGGGAAGCCAGGCAATATGCTaGACTTCCTTGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LSFGAYNSSRISDQGCVGSQAIC*TSLLPP
Trigger: GGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCT...TCCCACACAGCCTTGGTCAGAAATTCTAGAACTGTTATAAGCTCCAAATGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp TTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTGTGCTGAATGAACCAACCTaGTGGCAACAAGAGGGTAGC +
Preference number: 5 (lower is better)
Translates to: LCFLPFHPLPHLKSHIPVLNEPT*WQQEGS
Trigger: GCTACCCTCTTGTTGCCACAAGGTTGGTTCATTCAG...CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp CAAGGCAGCTCAGGCTCTGCACAAATACTTATGTTTTCTTCCCTTTCACCCTCTCAAATACAATCGGCTTaGGACAAGAATGCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: QGSSGSAQILMFSSLSPSQIQSA*DKNAGP
Trigger: TGGACCTGCATTCTTGTCCAAAGCCGATTGTATTTG...AGAGGGTGAAAGGGAAGAAAACATAAGTATTTGTGCAGAGCCTGAGCTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp TTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCTGTGCAAATACAATCGGCTTaGGACAAGAATGCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: LCFLPFHPLPHLKSHIPVQIQSA*DKNAGP
Trigger: TGGACCTGCATTCTTGTCCAAAGCCGATTGTATTTG...CACAGGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS-3UTR CAA 90 bp ATACTTATGTTTTCTTCCCTTTCACCCTCTACCCCATTTGAAGAGCCATATCCCAGCAAGGGCTTCTGTTaGTGCTTCTTTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: ILMFSSLSPSTPFEEPYPSKGFC*CFFVVA
Trigger: AGCAACAACAAAGAAGCACAAACAGAAGCCCTTGCT...GGGATATGGCTCTTCAAATGGGGTAGAGGGTGAAAGGGAAGAAAACATAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS-3UTR CAA 90 bp AGCTGTGCTAATCTTGAGGTTTTATGTAGAGTGTTTCAGGAGAAACAAACAGGAAGGAGAGCCATTATGTaGGTGTGGATAGCTACGAAC +
Preference number: 5 (lower is better)
Translates to: SCANLEVLCRVFQEKQTGRRAIM*VWIATN
Trigger: GTTCGTAGCTATCCACACCAACATAATGGCTCTCCT...TCCTGTTTGTTTCTCCTGAAACACTCTACATAAAACCTCAAGATTAGCACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CCA 72 bp TGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATaGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGG +
Preference number: 6 (lower is better)
Translates to: WPGAGRCRSPTG*RRPAAAPGSGR
Trigger: CCGACCAGAGCCGGGCGCTGCGGCTGGGCGACGCCATCCTGTCGGTGAACGGCACCGACCTGCGCCAGGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 72 bp CGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCGCCACTaGGCTCGGCCACCACCCGCACCCAGCGCTCCCTTA +
Preference number: 6 (lower is better)
Translates to: RRRRPSGSGSRH*ARPPPAPSAPL
Trigger: TAAGGGAGCGCTGGGTGCGGGTGGTGGCCGAGCTCAGTGGCGAGAGCCTGAGCCTGACGGGCGACGCCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 90 bp CGTCCACCATCCAGCTTTGCCTGCTCTGCCAGCCAGGCAATATGCTaGACTTCCTTGCTGCCTCCCGCTGTACTGGTTGCACCAAGCATG +
Preference number: 6 (lower is better)
Translates to: RPPSSFACSASQAIC*TSLLPPAVLVAPSM
Trigger: CATGCTTGGTGCAACCAGTACAGCGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 72 bp TCCTTCTCAGTCACAGCCATGAGAACAGGCCTCCACTaGTGTCGTCCACCATCCAGCTTTGCCTGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SFSVTAMRTGLH*CRPPSSFACSA
Trigger: GGCAGAGCAGGCAAAGCTGGATGGTGGACGACAGCAGTGGAGGCCTGTTCTCATGGCTGTGACTGAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 72 bp CTGCCTCCCGCTGTACTGGTTGCACCAAGCATGGCATaGAGCTCAGCCAGTACCTGTGGGAGGAGAGCCATT +
Preference number: 6 (lower is better)
Translates to: LPPAVLVAPSMA*SSASTCGRRAI
Trigger: AATGGCTCTCCTCCCACAGGTACTGGCTGAGCTCAATGCCATGCTTGGTGCAACCAGTACAGCGGGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 72 bp GCCTGCTCTGCCAGCCAGGCAATATGCTTGACTTCCTaGCTGCCTCCCGCTGTACTGGTTGCACCAAGCATG +
Preference number: 6 (lower is better)
Translates to: ACSASQAICLTS*LPPAVLVAPSM
Trigger: CATGCTTGGTGCAACCAGTACAGCGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 72 bp TGCCTCCCGCTGTACTGGTTGCACCAAGCATGGCATTaGGCTCAGCCAGTACCTGTGGGAGGAGAGCCATTA +
Preference number: 6 (lower is better)
Translates to: CLPLYWLHQAWH*AQPVPVGGEPL
Trigger: TAATGGCTCTCCTCCCACAGGTACTGGCTGAGCTCAATGCCATGCTTGGTGCAACCAGTACAGCGGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 72 bp CCATCCAGCTTTGCCTGCTCTGCCAGCCAGGCAATATaGTTGACTTCCTTGCTGCCTCCCGCTGTACTGGTT +
Preference number: 6 (lower is better)
Translates to: PSSFACSASQAI*LTSLLPPAVLV
Trigger: AACCAGTACAGCGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 72 bp AACAGGCCTCCACTGCTGTCGTCCACCATCCAGCTTTaGCTGCTCTGCCAGCCAGGCAATATGCTTGACTTC +
Preference number: 6 (lower is better)
Translates to: NRPPLLSSTIQL*LLCQPGNMLDF
Trigger: GAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGATGGTGGACGACAGCAGTGGAGGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 72 bp TCCAGCTTTGCCTGCTCTGCCAGCCAGGCAATATGCTaGACTTCCTTGCTGCCTCCCGCTGTACTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: SSFACSASQAIC*TSLLPPAVLVA
Trigger: TGCAACCAGTACAGCGGGAGGCAGCAAGGAAGTCAAGCATATTGCCTGGCTGGCAGAGCAGGCAAAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 90 bp ACTTCCTTGCTGCCTCCCGCTGTACTGGTTGCACCAAGCATGGCATaGAGCTCAGCCAGTACCTGTGGGAGGAGAGCCATTATGTTGGTG +
Preference number: 6 (lower is better)
Translates to: TSLLPPAVLVAPSMA*SSASTCGRRAIMLV
Trigger: CACCAACATAATGGCTCTCCTCCCACAGGTACTGGCTGAGCTCAATGCCATGCTTGGTGCAACCAGTACAGCGGGAGGCAGCAAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CCA 72 bp CTTTGGAGAGCCAGAGTCTTCACTGCCACTAAAGCTTaGAGACTGGGGAGAGGCACCTTCCCATGGCAGATC +
Preference number: 6 (lower is better)
Translates to: LWRARVFTATKA*RLGRGTFPWQI
Trigger: GATCTGCCATGGGAAGGTGCCTCTCCCCAGTCTCCAAGCTTTAGTGGCAGTGAAGACTCTGGCTCTCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 90 bp ATGGCATTGAGCTCAGCCAGTACCTGTGGGAGGAGAGCCATTATGTaGGTGTGGATAGCTACGAACCAGGAGTGTGCTGTGGCCGTATCC +
Preference number: 6 (lower is better)
Translates to: MALSSASTCGRRAIM*VWIATNQECAVAVS
Trigger: GGATACGGCCACAGCACACTCCTGGTTCGTAGCTATCCACACCAACATAATGGCTCTCCTCCCACAGGTACTGGCTGAGCTCAATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 72 bp CAACCTTGTGGCAACAAGAGGGTAGCTATGACACGGTaGTGCCCAGGCATCTCTTGTCCAAGGCATGCAGTC +
Preference number: 6 (lower is better)
Translates to: QPCGNKRVAMTR*CPGISCPRHAV
Trigger: GACTGCATGCCTTGGACAAGAGATGCCTGGGCATCACCGTGTCATAGCTACCCTCTTGTTGCCACAAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CCA 72 bp GAGCCAGAGTCTTCACTGCCACTAAAGCTTGGAGACTaGGGAGAGGCACCTTCCCATGGCAGATCTGATACT +
Preference number: 6 (lower is better)
Translates to: EPESSLPLKLGD*GEAPSHGRSDT
Trigger: AGTATCAGATCTGCCATGGGAAGGTGCCTCTCCCCAGTCTCCAAGCTTTAGTGGCAGTGAAGACTCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CCA 72 bp GTGACCGACATCCAGAACCTGAATGAACCAACCTTGTaGCAACAAGAGGGTAGCTATGACACGGTGATGCCC +
Preference number: 6 (lower is better)
Translates to: VTDIQNLNEPTL*QQEGSYDTVMP
Trigger: GGGCATCACCGTGTCATAGCTACCCTCTTGTTGCCACAAGGTTGGTTCATTCAGGTTCTGGATGTCGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 90 bp TTGGTGTGGATAGCTACGAACCAGGAGTGTGCTGTGGCCGTATCCTaGCAGCGTAAGATCAAGGTGTTCCTGCTATCAGGAGAATGTAGC +
Preference number: 6 (lower is better)
Translates to: LVWIATNQECAVAVS*QRKIKVFLLSGECS
Trigger: GCTACATTCTCCTGATAGCAGGAACACCTTGATCTTACGCTGCAAGGATACGGCCACAGCACACTCCTGGTTCGTAGCTATCCACACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 72 bp TTGAGAGGGATGACCTTCCTGTCCTTGGTGGTGTTCTaGTGCTTTGGAGAGCCAGAGTCTTCACTGCCACTA +
Preference number: 6 (lower is better)
Translates to: LRGMTFLSLVVF*CFGEPESSLPL
Trigger: TAGTGGCAGTGAAGACTCTGGCTCTCCAAAGCATCAGAACACCACCAAGGACAGGAAGGTCATCCCTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS TCA 72 bp AGTCATAAAGTAGCAAGTCCTTCTCAGTCACAGCCATaGGAACAGGCCTCCACTGCTGTCGTCCACCATCCA +
Preference number: 6 (lower is better)
Translates to: SHKVASPSQSQP*EQASTAVVHHP
Trigger: TGGATGGTGGACGACAGCAGTGGAGGCCTGTTCTCATGGCTGTGACTGAGAAGGACTTGCTACTTTATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 72 bp TCTGGCATGCTCAGGTTTCGAGCAGCAAAGCACATTTaGAGAGGGATGACCTTCCTGTCCTTGGTGGTGTTC +
Preference number: 6 (lower is better)
Translates to: SGMLRFRAAKHI*RGMTFLSLVVF
Trigger: GAACACCACCAAGGACAGGAAGGTCATCCCTCTCAAAATGTGCTTTGCTGCTCGAAACCTGAGCATGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 72 bp ATAGCTACGAACCAGGAGTGTGCTGTGGCCGTATCCTaGCAGCGTAAGATCAAGGTGTTCCTGCTATCAGGA +
Preference number: 6 (lower is better)
Translates to: IATNQECAVAVS*QRKIKVFLLSG
Trigger: TCCTGATAGCAGGAACACCTTGATCTTACGCTGCAAGGATACGGCCACAGCACACTCCTGGTTCGTAGCTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 72 bp GAGGGTAGCTATGACACGGTGATGCCCAGGCATCTCTaGTCCAAGGCATGCAGTCATAAAGTAGCAAGTCCT +
Preference number: 6 (lower is better)
Translates to: EGSYDTVMPRHL*SKACSHKVASP
Trigger: AGGACTTGCTACTTTATGACTGCATGCCTTGGACAAGAGATGCCTGGGCATCACCGTGTCATAGCTACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS CAA 90 bp TGGCAACAAGAGGGTAGCTATGACACGGTGATGCCCAGGCATCTCTaGTCCAAGGCATGCAGTCATAAAGTAGCAAGTCCTTCTCAGTCA +
Preference number: 6 (lower is better)
Translates to: WQQEGSYDTVMPRHL*SKACSHKVASPSQS
Trigger: TGACTGAGAAGGACTTGCTACTTTATGACTGCATGCCTTGGACAAGAGATGCCTGGGCATCACCGTGTCATAGCTACCCTCTTGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 72 bp GTGTGCAATACAAATACAATCGGCTTTGGACAAGAATaGAGGTCCATAGTCAGTTCTCCCTCAGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: VCNTNTIGFGQE*RSIVSSPSGPP
Trigger: TGGTGGCCCTGAGGGAGAACTGACTATGGACCTGCATTCTTGTCCAAAGCCGATTGTATTTGTATTGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212524.2
CDS CAA 90 bp TTCTTCACTCTTGCTGCTCACACAAGCAGTCCCATGCGAGTGACTTaGGCGGATAAGAACGTGTGCAATACAAATACAATCGGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: FFTLAAHTSSPMRVT*ADKNVCNTNTIGFG
Trigger: TCCAAAGCCGATTGTATTTGTATTGCACACGTTCTTATCCGCCAAAGTCACTCGCATGGGACTGCTTGTGTGAGCAGCAAGAGTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS TCA 72 bp TCACTCTTGCTGCTCACACAAGCAGTCCCATGCGAGTaGCTTTGGCGGATAAGAACGTGTGCAATACAAATA +
Preference number: 6 (lower is better)
Translates to: SLLLLTQAVPCE*LWRIRTCAIQI
Trigger: TATTTGTATTGCACACGTTCTTATCCGCCAAAGTCACTCGCATGGGACTGCTTGTGTGAGCAGCAAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS CAA 72 bp CTTGCTGCTCACACAAGCAGTCCCATGCGAGTGACTTaGGCGGATAAGAACGTGTGCAATACAAATACAATC +
Preference number: 6 (lower is better)
Translates to: LAAHTSSPMRVT*ADKNVCNTNTI
Trigger: GATTGTATTTGTATTGCACACGTTCTTATCCGCCAAAGTCACTCGCATGGGACTGCTTGTGTGAGCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047425.5
CDS CAA 90 bp GGAGAGGCACCTTCCCATGGCAGATCTGATACTAAAGATGGTTTCTaGATATATGGTGTTACTTCTCGGATGAATTTGACCTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GEAPSHGRSDTKDGF*IYGVTSRMNLTSSS
Trigger: GCTGCTGGAGGTCAAATTCATCCGAGAAGTAACACCATATATCAAGAAACCATCTTTAGTATCAGATCTGCCATGGGAAGGTGCCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2
CDS GCA 72 bp TGGCCGTATCCTTGCAGCGTAAGATCAAGGTGTTCCTaGTATCAGGAGAATGTAGCTCTATCAATCTGTTCT +
Preference number: 6 (lower is better)
Translates to: WPYPCSVRSRCS*YQENVALSICS
Trigger: AGAACAGATTGATAGAGCTACATTCTCCTGATAGCAGGAACACCTTGATCTTACGCTGCAAGGATACGGCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047425.5
ENSMUST00000212524.2