Pregenerated sensors for SNTB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060429Ensembl transcript IDs: ENSMUST00000039769.13, ENSMUST00000110200.3
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTGTGCATGTTACGTCTGGTGCACTGCCTGATGTCACAGTCCTaGGGCACGGCCGGCTTCCTTTCCAAAGGCAAGTCGCCTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: WLCMLRLVHCLMSQS*GTAGFLSKGKSPLC Trigger: ACAGAGAGGCGACTTGCCTTTGGAAAGGAAGCCGGCCGTGCCTCAGGACTGTGACATCAGGCAGTGCACCAGACGTAACATGCACAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 90 bp | TTCTTTAGGGTGCCCCTTGAAGTTTCTGAAACCAATAGAGGAGGCTaGGATGTTACATGTGACTCCTTAAACCTGAACCTGGCTGTGCAT | + |
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Preference number: 1 (lower is better) Translates to: FFRVPLEVSETNRGG*DVTCDSLNLNLAVH Trigger: ATGCACAGCCAGGTTCAGGTTTAAGGAGTCACATGTAACATCCCAGCCTCCTCTATTGGTTTCAGAAACTTCAAGGGGCACCCTAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 90 bp | ACACTGTTCAGTGTCCCTTGGAAATGGGGTTGTGTGGGAACTCTTTaGGGAGATGATGCTTTAAACTACAACTGTAACCCTATAAACACA | + |
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Preference number: 1 (lower is better) Translates to: TLFSVPWKWGCVGTL*GDDALNYNCNPINT Trigger: TGTGTTTATAGGGTTACAGTTGTAGTTTAAAGCATCATCTCCCCAAAGAGTTCCCACACAACCCCATTTCCAAGGGACACTGAACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 90 bp | TACGACGTGTACATTCACCTGCCCTCACCTCTTTGTTCTGATCTATaGAATTCTATTCTGATATTCCCTGTGGTGTTTTCTTTAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: YDVYIHLPSPLCSDL*NSILIFPVVFSLGC Trigger: GCACCCTAAAGAAAACACCACAGGGAATATCAGAATAGAATTTCATAGATCAGAACAAAGAGGTGAGGGCAGGTGAATGTACACGTCGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 90 bp | GGGTACAATACAATTTACAAATGCATCAACACTTTCCTACAGGTTTaGAGCTGGCCTCCACTCTTCAACATTTTAAAACAGGAAACCAAC | + |
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Preference number: 1 (lower is better) Translates to: GYNTIYKCINTFLQV*SWPPLFNILKQETN Trigger: GTTGGTTTCCTGTTTTAAAATGTTGAAGAGTGGAGGCCAGCTTCAAACCTGTAGGAAAGTGTTGATGCATTTGTAAATTGTATTGTACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR GCA 90 bp | GTCTGTGTTTCTGTGTGTGTAATGACAATCTTTCTTAAAATTGCCTaGAATTTGATTTCTGTAAGTACAGGTACCAGTTTTGGCTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VCVSVCVMTIFLKIA*NLISVSTGTSFGWE Trigger: CTCCCAGCCAAAACTGGTACCTGTACTTACAGAAATCAAATTGCAGGCAATTTTAAGAAAGATTGTCATTACACACACAGAAACACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAAGTCTGGTGCACTGCCTaGTGTCACAGTCCTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPVLAEHRAWASVKLHGKVWCTA*CHSPEA Trigger: TGCCTCAGGACTGTGACATCAGGCAGTGCACCAGAC...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR TCA 90 bp | GACCCCAGGGAGGAGAAAATTCTGAGCAGTCAAGAAATAAACTGCAGGCCCAGGTCATTCCACCTGGCTTaGTTCCTCTCTCACTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: DPREEKILSSQEINCRPRSFHLA*FLSHCC Trigger: GCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGA...CCTGGGCCTGCAGTTTATTTCTTGACTGCTCAGAATTTTCTCCTCCCTGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGCTGAGGAAGCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTTGCATGGGTATCCATTTCTCATCTaGTCGGCTCTGGCTTACCTG | + |
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Preference number: 2 (lower is better) Translates to: TELRKPNPGPLGSFALHGYPFLI*SALAYL Trigger: CAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATA...CCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCTCAGCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR GCA 90 bp | CAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGACAAAGCCTCTCTCACTGCTGCTaGTGCTGCTGGCTCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QEINCRPRESVEKEEGQSLSHCC*CCWLSL Trigger: AAGAGAGAGCCAGCAGCAGCAGCAGCAGTGAGAGAG...GCTTTGTCCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAATACAGGTACCAGTTTTaGCTGGGAGACAGCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: LPVLAEHRAWASVKLHGKYRYQF*LGDSIQ Trigger: CTGGATGCTGTCTCCCAGCCAAAACTGGTACCTGTA...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR GCA 90 bp | TCAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGACAAAGTTCCTCTCTCACTGCTaGTGCTGCTGCTGGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SRNKLQAQGISGKRGGTKFLSHC*CCCWLS Trigger: AGAGAGCCAGCAGCAGCAGCAGCAGTGAGAGAGGAA...CTTTGTCCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAACTGGGATGTTACATGTaGCTCCTTAAACCTGAACCT | + |
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Preference number: 2 (lower is better) Translates to: LPVLAEHRAWASVKLHGKLGCYM*LLKPEP Trigger: AGGTTCAGGTTTAAGGAGTCACATGTAACATCCCAG...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAACTGATGTCACAGTCCTaGGGCACGGCCGGCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SSALFHSCSTYAKENTLELMSQS*GTAGFL Trigger: AAGGAAGCCGGCCGTGCCTCAGGACTGTGACATCAG...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGCTGAGGAAGCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTTGCATGGGATGGAAAACACGTACTaGGAATTCAAAATTCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: TELRKPNPGPLGSFALHGMENTY*EFKILG Trigger: GCCTAGAATTTTGAATTCTCAGTACGTGTTTTCCAT...CCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCTCAGCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR TCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTATAAACACACAGAGCTaGGGAAGCCAAATCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: NYQTNESRLGQLRKNLPSINTQS*GSQILG Trigger: GCCCAGGATTTGGCTTCCTCAGCTCTGTGTGTTTAT...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR GCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAAGTGTTTTCTTTAGGGTaGCCCTTGAAGTTTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LPVLAEHRAWASVKLHGKVFSLG*PLKFLK Trigger: TTTCAGAAACTTCAAGGGGCACCCTAAAGAAAACAC...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAAACTTTGGAATCAGTCTaGACCAATAACAACAACAAC | + |
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Preference number: 2 (lower is better) Translates to: LPVLAEHRAWASVKLHGKTLESV*TNNNNN Trigger: GTTGTTGTTGTTATTGGTCCAGACTGATTCCAAAGT...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGACCAATAGAGGAGGCTaGGATGTTACATGTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRTNRGG*DVTCDS Trigger: GGAGTCACATGTAACATCCCAGCCTCCTCTATTGGT...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR TCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTAGCATCATTGAGAACTaGGAGATGCTTTCCATTACT | + |
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Preference number: 2 (lower is better) Translates to: NYQTNESRLGQLRKNLPSSIIEN*EMLSIT Trigger: AGTAATGGAAAGCATCTCTCAGTTCTCAATGATGCT...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCAGAGGAAGCCAAATCCTaGGCCTTTAGGCAGTTTCGC | + |
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Preference number: 2 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSEEAKS*AFRQFR Trigger: GCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCTC...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR TCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCATGTTGTTCCTACCAATaGAAGTTAGCTCAACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSCCSYQ*KLAQLE Trigger: CTCAAGTTGAGCTAACTTTCATTGGTAGGAACAACA...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR GCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCATACTTAAAATGCATGTaGATGGGAACAGGCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSYLKCM*MGTGRN Trigger: GTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTA...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 72 bp | ATGTTACGTCTGGTGCACTGCCTGATGTCACAGTCCTaGGGCACGGCCGGCTTCCTTTCCAAAGGCAAGTCG | + |
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Preference number: 3 (lower is better) Translates to: MLRLVHCLMSQS*GTAGFLSKGKS Trigger: CGACTTGCCTTTGGAAAGGAAGCCGGCCGTGCCTCAGGACTGTGACATCAGGCAGTGCACCAGACGTAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR GCA 72 bp | AGGCAGTTTCGCTTTGCATGGGCATCTGCTAAACGATaGCTCTTCCAGTGCTGGCAGAACACAGGGCATGGG | + |
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Preference number: 3 (lower is better) Translates to: RQFRFAWASAKR*LFQCWQNTGHG Trigger: CCCATGCCCTGTGTTCTGCCAGCACTGGAAGAGGCATCGTTTAGCAGATGCCCATGCAAAGCGAAACTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | GCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTTGCATaGGCATCTGCTAAACGATGCCTCTTCCAGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: AKSWAFRQFRFA*ASAKRCLFQCW Trigger: CCAGCACTGGAAGAGGCATCGTTTAGCAGATGCCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | GAGATCATCGTGGGAGGACTACCTCATCATTCCACCTaGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: EIIVGGLPHHST*LDSSLTAAAAA Trigger: AGCAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGGTAGTCCTCCCACGATGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
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| 3UTR GCA 72 bp | GGGCAGAGGAACAGGTATAACTATCCATTTCTCATCTaGTCGGCTCTGGCTTACCTGGGTGATCCAGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: GQRNRYNYPFLI*SALAYLGDPVA Trigger: GGCAACTGGATCACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATAGTTATACCTGTTCCTCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | ACGATGCCTCTTCCAGTGCTGGCAGAACACAGGGCATaGGCTAGCGTAAAACTCCATGGAAAACACGTACTG | + |
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Preference number: 3 (lower is better) Translates to: TMPLPVLAEHRA*ASVKLHGKHVL Trigger: CAGTACGTGTTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAGAGGCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 72 bp | TCCATTTCTCATCTGCTCGGCTCTGGCTTACCTGGGTaGTCCAGTTGCCTAGAAACTGGTGTGATTAAGATC | + |
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Preference number: 3 (lower is better) Translates to: SISHLLGSGLPG*SSCLETGVIKI Trigger: GATCTTAATCACACCAGTTTCTAGGCAACTGGATCACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | ACAGGTATAACTATCCATTTCTCATCTGCTCGGCTCTaGCTTACCTGGGTGATCCAGTTGCCTAGAAACTGG | + |
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Preference number: 3 (lower is better) Translates to: TGITIHFSSARL*LTWVIQLPRNW Trigger: CCAGTTTCTAGGCAACTGGATCACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATAGTTATACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | CTGCAATTTGATTTCTGTAAGTACAGGTACCAGTTTTaGCTGGGAGACAGCATCCAGGGGTGTGGAATGGAG | + |
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Preference number: 3 (lower is better) Translates to: LQFDFCKYRYQF*LGDSIQGCGME Trigger: CTCCATTCCACACCCCTGGATGCTGTCTCCCAGCCAAAACTGGTACCTGTACTTACAGAAATCAAATTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CAA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTACTGTTCAGTGTCCCTaGGAAATGGGGTTGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: NYQTNESRLGQLRKNLPSTVQCP*EMGLCG Trigger: CCCACACAACCCCATTTCCAAGGGACACTGAACAGT...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | GTGCCCCTTGAAGTTTCTGAAACCAATAGAGGAGGCTaGGATGTTACATGTGACTCCTTAAACCTGAACCTG | + |
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Preference number: 3 (lower is better) Translates to: VPLEVSETNRGG*DVTCDSLNLNL Trigger: CAGGTTCAGGTTTAAGGAGTCACATGTAACATCCCAGCCTCCTCTATTGGTTTCAGAAACTTCAAGGGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 72 bp | TGCATGTGCATGGGAACAGGCAGAAACAGGGACCACTaGAAGGTACTTCCACTGAAAACTGTAAAATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: CMCMGTGRNRDH*KVLPLKTVKCR Trigger: TCTGCATTTTACAGTTTTCAGTGGAAGTACCTTTCAGTGGTCCCTGTTTCTGCCTGTTCCCATGCACATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | AGTGTCCCTTGGAAATGGGGTTGTGTGGGAACTCTTTaGGGAGATGATGCTTTAAACTACAACTGTAACCCT | + |
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Preference number: 3 (lower is better) Translates to: SVPWKWGCVGTL*GDDALNYNCNP Trigger: AGGGTTACAGTTGTAGTTTAAAGCATCATCTCCCCAAAGAGTTCCCACACAACCCCATTTCCAAGGGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR GCA 72 bp | TCTATTCTGATATTCCCTGTGGTGTTTTCTTTAGGGTaGCCCTTGAAGTTTCTGAAACCAATAGAGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SILIFPVVFSLG*PLKFLKPIEEA Trigger: AGCCTCCTCTATTGGTTTCAGAAACTTCAAGGGGCACCCTAAAGAAAACACCACAGGGAATATCAGAATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCAGCTAAGGAGAACACTTaGGAATCAGTCTGGACCAAT | + |
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Preference number: 3 (lower is better) Translates to: VCKSLQDSLAIETVHFASAKENT*ESVWTN Trigger: ATTGGTCCAGACTGATTCCAAAGTGTTCTCCTTAGC...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 72 bp | ACAAACAATCTCTCCCAAATGACTAGGTTGATGCACTaGCCAGGACATGAACCTGACTTACTTTGTATCATC | + |
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Preference number: 3 (lower is better) Translates to: TNNLSQMTRLMH*PGHEPDLLCII Trigger: GATGATACAAAGTAAGTCAGGTTCATGTCCTGGTCAGTGCATCAACCTAGTCATTTGGGAGAGATTGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 72 bp | CAAATTACCAGACTAATGAATCCAGGCTCGGGCAACTaGGGAAGAATCTACCAAGTAAAGATAGTTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: QITRLMNPGSGN*GRIYQVKIVHL Trigger: CAGATGAACTATCTTTACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CAA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGTGTCCTTGGTTGTCATaGTTTAAAAGATACGACGTG | + |
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Preference number: 3 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRCPWLS*FKRYDV Trigger: CACGTCGTATCTTTTAAACAATGACAACCAAGGACA...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CAA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAATCTTTAGGGTGCCCCTaGAAGTTTCTGAAACCAATA | + |
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Preference number: 3 (lower is better) Translates to: SSALFHSCSTYAKENTLESLGCP*KFLKPI Trigger: TATTGGTTTCAGAAACTTCAAGGGGCACCCTAAAGA...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCAAAAAGGTGTGTATTGTaGCTGTTGTTCCTACCAATG | + |
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Preference number: 3 (lower is better) Translates to: VCKSLQDSLAIETVHFASKRCVL*LLFLPM Trigger: CATTGGTAGGAACAACAGCAACAATACACACCTTTT...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCATTTAAAAGGTGTGTATaGTTGCTGTTGTTCCTACCA | + |
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Preference number: 3 (lower is better) Translates to: VCKSLQDSLAIETVHFASFKRCV*LLLFLP Trigger: TGGTAGGAACAACAGCAACAATACACACCTTTTAAA...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR TCA 72 bp | TTAAAAGGTGTGTATTGTTGCTGTTGTTCCTACCAATaGAAGTTAGCTCAACTTGAGTCAGGAAATCACAAG | + |
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Preference number: 3 (lower is better) Translates to: LKGVYCCCCSYQ*KLAQLESGNHK Trigger: CTTGTGATTTCCTGACTCAAGTTGAGCTAACTTTCATTGGTAGGAACAACAGCAACAATACACACCTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| 3UTR CCA 72 bp | GGAAGAATCTACCAAGTAAAGATAGTTCATCTGTCCTaGTTTTCATTTAGGAACAAGTATTATGGGTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: GRIYQVKIVHLS*FSFRNKYYGFH Trigger: ATGGAACCCATAATACTTGTTCCTAAATGAAAACCAGGACAGATGAACTATCTTTACTTGGTAGATTCTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR TCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAAGCTCCGGGAGGTCGGTaGAGGCGGTGCGGACCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LPVLAEHRAWASVKLHGKAPGGR*RRCGPR Trigger: CCGGGGTCCGCACCGCCTTCACCGACCTCCCGGAGC...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR TCA 90 bp | CAGTCAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGACAGCTCCGGGAGGTCGGTaGAGGCGGTGCGGACCCCGG | + |
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Preference number: 4 (lower is better) Translates to: QSRNKLQAQGISGKRGGTAPGGR*RRCGPR Trigger: CCGGGGTCCGCACCGCCTTCACCGACCTCCCGGAGC...TGTCCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CCA 90 bp | GACCCCAGGGAGGAGAAAATTCTGAGCAGTCAAGAAATAAACTGCAGGCCCAGGCTGCCTCGTCGTGGGTaGCGTCCCGCAGGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPREEKILSSQEINCRPRLPRRG*RPAGLL Trigger: GAGCAGACCTGCGGGACGCCACCCACGACGAGGCAG...CCTGGGCCTGCAGTTTATTTCTTGACTGCTCAGAATTTTCTCCTCCCTGGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | GGACAAAGCAGAACAGGGAGGAGGGAGATCATCGTGGGAGGACTACCTCATCATGCCTGCGCGCTTCAATaGCTGCACTGCCTCGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQSRTGRREIIVGGLPHHACALQ*LHCLVV Trigger: CACGACGAGGCAGTGCAGGCATTGAAGCGCGCAGGC...ATGATGAGGTAGTCCTCCCACGATGATCTCCCTCCTCCCTGTTCTGCTTTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
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| CDS-3UTR CCA 90 bp | ACAAAGCAGAACAGGGAGGAGGGAGATCATCGTGGGAGGACTACCTCATCATTCTGCACTGCCTCGTCGTaGGTGGCGTCCCGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKQNREEGDHRGRTTSSFCTASS*VASRRS Trigger: AGACCTGCGGGACGCCACCCACGACGAGGCAGTGCA...GAATGATGAGGTAGTCCTCCCACGATGATCTCCCTCCTCCCTGTTCTGCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR TCA 90 bp | CCTCATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCTGGCGCCCCTCTTCTGGTTTaGGATGGACTCAGGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHHSTWLDSSLTAAAAAGAPLLV*DGLRYL Trigger: CAGGTACCTGAGTCCATCTCAAACCAGAAGAGGGGC...GCCAGCAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAATCCCCAGCTGCTCCCTaGTGTCAGCAACCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVLAEHRAWASVKLHGKSPAAP*CQQPHG Trigger: CCCGTGTGGTTGCTGACATCAGGGAGCAGCTGGGGA...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCAGAACAGGGAGGAGGGAGATCATCGTGGGAGGACTACCTCATCATTCGCGCGCTTCAATGCCTaGACTGCCTCGTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKQNREEGDHRGRTTSSFARFNA*TASSWV Trigger: CACCCACGACGAGGCAGTGCAGGCATTGAAGCGCGC...GAATGATGAGGTAGTCCTCCCACGATGATCTCCCTCCTCCCTGTTCTGCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | CAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGACAAAGCTGGTGGCAGCCCCTATaGCGTTGTACGCCGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QEINCRPRESVEKEEGQSWWQPL*RCTPQR Trigger: GCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCA...GCTTTGTCCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | CCTCATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCTGGCTTGGGTCTGATCCGCTaGCAGCCCCTTGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHHSTWLDSSLTAAAAAGLGLIR*QPLEDL Trigger: AAGATCTTCAAGGGGCTGGCAGCGGATCAGACCCAA...GCCAGCAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCAGAACAGGGAGGAGGGAGATCATCGTGGGAGGACTACCTCATCATTCCTTCAATGCCTGCACTaGCTCGTCGTGGGTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKQNREEGDHRGRTTSSFLQCLH*LVVGGV Trigger: GACGCCACCCACGACGAGGCAGTGCAGGCATTGAAG...GAATGATGAGGTAGTCCTCCCACGATGATCTCCCTCCTCCCTGTTCTGCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | GACCCCAGGGAGGAGAAAATTCTGAGCAGTCAAGAAATAAACTGCAGGCCCAGGCCAGCAGCACTTCCTTaGCTGCGCGCTTCAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPREEKILSSQEINCRPRPAALP*LRASMP Trigger: AGGCATTGAAGCGCGCAGGCAAGGAAGTGCTGCTGG...CCTGGGCCTGCAGTTTATTTCTTGACTGCTCAGAATTTTCTCCTCCCTGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCTGGCTCTCTCTAGAACGAACCATTGGTaGCAGCCCCTATGCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPPGLIPLSLLLLLLALSRTNHW*QPLCRC Trigger: ACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCT...AGAGAGAGCCAGCAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTTGGTGGCAGCCCCTATaGCGTTGTACGCCGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSWWQPL*RCTPQR Trigger: GCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCA...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTCAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGCAGCACTTCCTTGCCTaGGCGCTTCAATGCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQSRNKLQAQGISGKRGGQHFLA*ALQCLH Trigger: GTGCAGGCATTGAAGCGCGCAGGCAAGGAAGTGCTG...CCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTGACTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCTGAGGAAGCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTTGCATGGGAGAACGAACCATTGGTaGCAGCCCCTATGCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TELRKPNPGPLGSFALHGRTNHW*QPLCRC Trigger: ACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCT...CCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCTCAGCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTGCCTGCGCGCTTCAATaGCTGCACTGCCTCGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSACALQ*LHCLVV Trigger: CACGACGAGGCAGTGCAGGCATTGAAGCGCGCAGGC...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | GGAACAGGTATAACTATCCATTTCTCATCTGCTCGGCTCTGGCTTACCTGGGTGCACGACTGCCAGCAATaGCTGTTTTCCCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGITIHFSSARLWLTWVHDCQQ*LFSPAA Trigger: AGCAGCTGGGGAAAACAGGCATTGCTGGCAGTCGTG...CACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATAGTTATACCTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCTGAGGAAGCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTTGCATGGGGTCCCTGCTGATCTCTaGCCTGAAGAGATGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TELRKPNPGPLGSFALHGVPADL*PEEMCF Trigger: GAAACACATCTCTTCAGGGCAGAGATCAGCAGGGAC...CCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCTCAGCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | GACTACCTCATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGTTCACGCCCCTCTTCTaGTTTGAGATGGACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DYLIIPPGLIPLSLLLLLFTPLF*FEMDSG Trigger: ACCTGAGTCCATCTCAAACCAGAAGAGGGGCGTGAA...CAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGGTAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CCA 90 bp | GGAACAGGTATAACTATCCATTTCTCATCTGCTCGGCTCTGGCTTACCTGGGTGAGATCCATCCCAGCCTaGGGTGATCCTTTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTGITIHFSSARLWLTWVRSIPA*GDPFPG Trigger: TCCAGGGAAAGGATCACCCCAGGCTGGGATGGATCT...CACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATAGTTATACCTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTCTTCAATGCCTGCACTaGCTCGTCGTGGGTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSLQCLH*LVVGGV Trigger: GACGCCACCCACGACGAGGCAGTGCAGGCATTGAAG...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGGCGCGCTTCAATGCCTaGACTGCCTCGTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRARFNA*TASSWV Trigger: CACCCACGACGAGGCAGTGCAGGCATTGAAGCGCGC...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | GACTACCTCATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGTCTTGGAGACTCAGGTaGAGGTGTTTCCCATCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DYLIIPPGLIPLSLLLLLSWRLR*RCFPSN Trigger: ATTGGATGGGAAACACCTCCACCTGAGTCTCCAAGA...CAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGGTAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CCA 90 bp | GACTACCTCATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCTTTTCCGGTCTCTATaGAAGGAGAAGGACTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DYLIIPPGLIPLSLLLLLLFRSL*KEKDWD Trigger: ATCCCAGTCCTTCTCCTTCCATAGAGACCGGAAAAG...CAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGGTAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CCA 90 bp | GGAACAGGTATAACTATCCATTTCTCATCTGCTCGGCTCTGGCTTACCTGGGTGACCAGGCTTGGGCAGTaGCAGAGTCCTTACTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGITIHFSSARLWLTWVTRLGQ*QSPYFS Trigger: TGAGAAGTAAGGACTCTGCCACTGCCCAAGCCTGGT...CACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATAGTTATACCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| 3UTR CAA 72 bp | AGGAAGCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTaGCATGGGCATCTGCTAAACGATGCCTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKPNPGPLGSFA*HGHLLNDASSS Trigger: ACTGGAAGAGGCATCGTTTAGCAGATGCCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR GCA 90 bp | GACCCCAGGGAGGAGAAAATTCTGAGCAGTCAAGAAATAAACTGCAGGCCCAGGTTCACCAGAACTTTATaGCAGCGATCCCGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DPREEKILSSQEINCRPRFTRTL*QRSRTK Trigger: TTTGGTGCGGGATCGCTGGCATAAAGTTCTGGTGAA...CCTGGGCCTGCAGTTTATTTCTTGACTGCTCAGAATTTTCTCCTCCCTGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTATGGACTCAGGTACCTaGTCCGGGAGGTCGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSMDSGT*SGRSVK Trigger: CTTCACCGACCTCCCGGAGCAGGTACCTGAGTCCAT...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR CCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTCGTTCACCGACAGGATaGCATCGCCCACATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSRSPTG*HRPHTG Trigger: CCCTGTATGTGGGCGATGCCATCCTGTCGGTGAACG...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAAGCAGACAGAAAGGAGTaGATGATGAAAACGATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVLAEHRAWASVKLHGKADRKE*MMKTIG Trigger: GCCGATCGTTTTCATCATCCACTCCTTTCTGTCTGC...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR CCA 90 bp | GTGGGAGGACTACCTCATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTAGCCCATCCTTGTATTaGTATGAGGTCACTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGGLPHHSTWLDSSLTAASPSLY*YEVTRM Trigger: CATCCTAGTGACCTCATACCAATACAAGGATGGGCT...AGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGGTAGTCCTCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR GCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTTCCGGGCACCTTTTCTaGAAGCCAGCCAAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSSGHLF*KPAKMP Trigger: AGGCATCTTGGCTGGCTTGCAGAAAAGGTGCCCGGA...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCACTGCCTCGTCGTGGGTaGCGTCCCGCAGGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSLPRRG*RPAGLL Trigger: GAGCAGACCTGCGGGACGCCACCCACGACGAGGCAG...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | GGAACAGGTATAACTATCCATTTCTCATCTGCTCGGCTCTGGCTTACCTGGGTGCAGAACAACCAGGGCTaGTTTCCACTGTTTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GTGITIHFSSARLWLTWVQNNQG*FPLFLT Trigger: AGTGAGAAACAGTGGAAACCAGCCCTGGTTGTTCTG...CACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATAGTTATACCTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGATACGACGTGTACATTCACCTGCCCTCACCTCTTTGTTCTGATCTACCAGCAGCACTTCCTTaGCTGCGCGCTTCAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKRYDVYIHLPSPLCSDLPAALP*LRASMP Trigger: AGGCATTGAAGCGCGCAGGCAAGGAAGTGCTGCTGG...TAGATCAGAACAAAGAGGTGAGGGCAGGTGAATGTACACGTCGTATCTTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGGCAAGCCAGCCAAGATaGCTGATCTCACGACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRASQPR*LISRLP Trigger: TGGCAGTCGTGAGATCAGGCATCTTGGCTGGCTTGC...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCATGCACTGCCTCGTCGTaGGTGGCGTCCCGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSCTASS*VASRRS Trigger: AGACCTGCGGGACGCCACCCACGACGAGGCAGTGCA...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR TCA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCAGCCCCTCTTCTGGTTTaGGATGGACTCAGGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCKSLQDSLAIETVHFASAPLLV*DGLRYL Trigger: CAGGTACCTGAGTCCATCTCAAACCAGAAGAGGGGC...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR TCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCATACAGGGCTTGGGTCTaGTCCGCTGCCAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSYRAWV*SAASPL Trigger: CAAGGGGCTGGCAGCGGATCAGACCCAAGCCCTGTA...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAACAGCACTTCCTTGCCTaGGCGCTTCAATGCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSALFHSCSTYAKENTLEQHFLA*ALQCLH Trigger: GTGCAGGCATTGAAGCGCGCAGGCAAGGAAGTGCTG...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGATGCTTCTTGTCCAGTaGGAGAGGTCCCTGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRMLLVQ*ERSLLI Trigger: GATCAGCAGGGACCTCTCCCACTGGACAAGAAGCAT...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAACCTGTTTTCCCCAGCTaGTCCCTGATGTCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SSALFHSCSTYAKENTLEPVFPS*SLMSAT Trigger: GGTTGCTGACATCAGGGAGCAGCTGGGGAAAACAGG...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCAGGTGCCAGTTCGTGTTaGAAAGGACAGATCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCKSLQDSLAIETVHFASGASSC*KGQIHP Trigger: GGGATGGATCTGTCCTTTGCAACACGAACTGGCACC...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGATACGACGTGTACATTCACCTGCCCTCACCTCTTTGTTCTGATCTAGGCACCCCTGTACTATaGTTCTTGTCCAGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKRYDVYIHLPSPLCSDLGTPVL*FLSSGR Trigger: TCTCCCACTGGACAAGAAGCATAGTACAGGGGTGCC...TAGATCAGAACAAAGAGGTGAGGGCAGGTGAATGTACACGTCGTATCTTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTCTTTTCCGGTCTCTATaGAAGGAGAAGGACTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSLFRSL*KEKDWD Trigger: ATCCCAGTCCTTCTCCTTCCATAGAGACCGGAAAAG...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR TCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCAGCCAGCCAAGATGCCTaGTCTCACGACTGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSASQDA*SHDCQQ Trigger: TTGCTGGCAGTCGTGAGATCAGGCATCTTGGCTGGC...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR TCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCATCCTTTCCCTGGACCTaGATGGACCAGCCTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSSFPWT*MDQPGS Trigger: GCTACCAGGCTGGTCCATTCAGGTCCAGGGAAAGGA...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGTTCACCAGAACTTTATaGCAGCGATCCCGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRFTRTL*QRSRTK Trigger: TTTGGTGCGGGATCGCTGGCATAAAGTTCTGGTGAA...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAATTGGGTCTGATCCGCTaGCAGCCCCTTGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSALFHSCSTYAKENTLELGLIR*QPLEDL Trigger: AAGATCTTCAAGGGGCTGGCAGCGGATCAGACCCAA...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCATTCACGCCCCTCTTCTaGTTTGAGATGGACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCKSLQDSLAIETVHFASFTPLF*FEMDSG Trigger: ACCTGAGTCCATCTCAAACCAGAAGAGGGGCGTGAA...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCAGCGCTGAACCAGGCTTaGGCAGTGGCAGAGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSALNQA*AVAESL Trigger: TAAGGACTCTGCCACTGCCCAAGCCTGGTTCAGCGC...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCAAGCTCCGCTGAATTGTaGCACCCCTGTACTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCKSLQDSLAIETVHFASSSAEL*HPCTML Trigger: AAGCATAGTACAGGGGTGCCACAATTCAGCGGAGCT...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTTGTGTTTCAATTCCTTaGTTGGTGCCAGTTCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NYQTNESRLGQLRKNLPSCVSIP*LVPVRV Trigger: AACACGAACTGGCACCAAGCAAGGAATTGAAACACA...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| 3UTR CAA 72 bp | AGGGGTGTGGAATGGAGTTGCAGAATTACCCATCATTaGTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: RGVEWSCRITHH*CVRVFRIVLQL Trigger: CAATTGCAAGACTATCCTGAAGACTCTTACACACAAATGATGGGTAATTCTGCAACTCCATTCCACACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR TCA 90 bp | TATTTCCATACTTCATTGATGCCATTCATTAAATACCTTGGTCTGGGTAGTTCAGGGAAGGCACCATCCTaGGGCTCAGTGGAAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YFHTSLMPFIKYLGLGSSGKAPS*GSVEIE Trigger: TTCTATTTCCACTGAGCCTCAGGATGGTGCCTTCCC...TGAACTACCCAGACCAAGGTATTTAATGAATGGCATCAATGAAGTATGGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAGATACGACGTGTACATTCACCTGCCCTCACCTCTTTGTTCTGATCTACATCCGAAGACATTTTaGGCTTCTCATAAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FKRYDVYIHLPSPLCSDLHPKTF*ASHKGT Trigger: AGTCCCCTTATGAGAAGCTCAAAATGTCTTCGGATG...TAGATCAGAACAAAGAGGTGAGGGCAGGTGAATGTACACGTCGTATCTTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR GCA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGCTTTCCTCCGTGGCATaGTGTCGTAGATTAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRLSSVA*CRRLKD Trigger: ATCTTTTAATCTACGACAGCATGCCACGGAGGAAAG...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAATCTTGGAGACTCAGGTaGAGGTGTTTCCCATCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSALFHSCSTYAKENTLESWRLR*RCFPSN Trigger: ATTGGATGGGAAACACCTCCACCTGAGTCTCCAAGA...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CCA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGCATTGTCATAATGTATaGTCAAGCGGCATTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRHCHNV*SSGIPG Trigger: ACCAGGAATGCCGCTTGACCATACATTATGACAATG...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| 3UTR CAA 72 bp | CATTTGTGTGTAAGAGTCTTCAGGATAGTCTTGCAATaGAAACAGTCCACTTTGCTTCAGATTCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLCVRVFRIVLQ*KQSTLLQILAA Trigger: AGCTGCCAGAATCTGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACACAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAATTAGCATCTGGCGAGTaGATTTCTAGCTGCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSALFHSCSTYAKENTLELASGE*ISSCLF Trigger: AAACAGGCAGCTAGAAATTCACTCGCCAGATGCTAA...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| 3UTR CAA 72 bp | ACCCATCATTTGTGTGTAAGAGTCTTCAGGATAGTCTaGCAATTGAAACAGTCCACTTTGCTTCAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: THHLCVRVFRIV*QLKQSTLLQIL Trigger: CAGAATCTGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACACAAATGATGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| 3UTR CAA 72 bp | GTGAATTTATTAGATCTGACACTTGACATTAGATTCTaGAGAGAAAGGGGTTATTTGATTAAGAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNLLDLTLDIRF*RERGYLIKRGG Trigger: TCCTCCCCTCTTAATCAAATAACCCCTTTCTCTCAAGAATCTAATGTCAAGTGTCAGATCTAATAAATTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS GCA 90 bp | TTATGCCAGCGATCCCGCACCAAAACTTCCAGCAGTCCGCTCCGCTaGGCCCGGGCGCCTCCACCGCCAGCCGGCGCAGCCACAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCQRSRTKTSSSPLR*ARAPPPPAGAATAA Trigger: AGCGGCTGTGGCTGCGCCGGCTGGCGGTGGAGGCGCCCGGGCGCAGCGGAGCGGACTGCTGGAAGTTTTGGTGCGGGATCGCTGGCATAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
||
| CDS CCA 90 bp | GGACCGGGTGCCCGGTCCCGGAGCCCCTGCAGAACGAACCATTGGTaGCAGCCCCTATGCCGTTGTACGCCGCAGCGCCCTCCTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPGARSRSPCRTNHW*QPLCRCTPQRPPRS Trigger: GCTGCGAGGAGGGCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAGGGGCTCCGGGACCGGGCACCCGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
||
| CDS GCA 90 bp | CGGTCCCGGAGCCCCTGCAGAACGAACCATTGGTGGCAGCCCCTATaGCGTTGTACGCCGCAGCGCCCTCCTCGCAGCTCAACACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRSPCRTNHWWQPL*RCTPQRPPRSSTPG Trigger: CCCTGGTGTTGAGCTGCGAGGAGGGCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAGGGGCTCCGGGACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
||
| CDS TCA 90 bp | TCTTCTGGTTTGAGATGGACTCAGGTACCTGCTCCGGGAGGTCGGTaGAGGCGGTGCGGACCCCGGCGGGAGAGTCCGGGGCTTGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSGLRWTQVPAPGGR*RRCGPRRESPGLER Trigger: TCGCTCAAGCCCCGGACTCTCCCGCCGGGGTCCGCACCGCCTTCACCGACCTCCCGGAGCAGGTACCTGAGTCCATCTCAAACCAGAAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
||
| CDS GCA 90 bp | AGCACCTTCACGCCCCTCTTCTGGTTTGAGATGGACTCAGGTACCTaGTCCGGGAGGTCGGTGAAGGCGGTGCGGACCCCGGCGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STFTPLFWFEMDSGT*SGRSVKAVRTPAGE Trigger: CTCTCCCGCCGGGGTCCGCACCGCCTTCACCGACCTCCCGGAGCAGGTACCTGAGTCCATCTCAAACCAGAAGAGGGGCGTGAAGGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
||
| CDS GCA 90 bp | CAGCTCAACACCAGGGCGTCCTCGCTCAAGTTCACCAGAACTTTATaGCAGCGATCCCGCACCAAAACTTCCAGCAGTCCGCTCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLNTRASSLKFTRTL*QRSRTKTSSSPLRC Trigger: GCAGCGGAGCGGACTGCTGGAAGTTTTGGTGCGGGATCGCTGGCATAAAGTTCTGGTGAACTTGAGCGAGGACGCCCTGGTGTTGAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
||
| CDS GCA 90 bp | CCTGGACCTGAATGGACCAGCCTGGTAGCAAGAAGTGGATACGAATaGACCGGGCTGAACCAGGCCTCTTTCCTCCGTGGCATGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGPEWTSLVARSGYE*TGLNQASFLRGMLS Trigger: CGACAGCATGCCACGGAGGAAAGAGGCCTGGTTCAGCCCGGTGCATTCGTATCCACTTCTTGCTACCAGGCTGGTCCATTCAGGTCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | ATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCTGGCTCTCGCCCACATACAGGGCTaGGGTCTGATCCGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IIPPGLIPLSLLLLLLALAHIQG*GLIRCQ Trigger: CTGGCAGCGGATCAGACCCAAGCCCTGTATGTGGGC...GAGAGCCAGCAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS CCA 90 bp | TGCTTGGTGCCAGTTCGTGTTGCAAAGGACAGATCCATCCCAGCCTaGGGTGATCCTTTCCCTGGACCTGAATGGACCAGCCTGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLVPVRVAKDRSIPA*GDPFPGPEWTSLVA Trigger: TGCTACCAGGCTGGTCCATTCAGGTCCAGGGAAAGGATCACCCCAGGCTGGGATGGATCTGTCCTTTGCAACACGAACTGGCACCAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | TCAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGACAAAGGCAGCCCCTATGCCGTaGTACGCCGCAGCGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRNKLQAQGISGKRGGTKAAPMP*YAAAPS Trigger: GGAGGGCGCTGCGGCGTACAACGGCATAGGGGCTGC...CTTTGTCCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CAA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTGCAGCCCCTATGCCGTaGTACGCCGCAGCGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NYQTNESRLGQLRKNLPSAAPMP*YAAAPS Trigger: GGAGGGCGCTGCGGCGTACAACGGCATAGGGGCTGC...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | ATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCTGGCTCTCTCCGCTGCCAGCCCCTaGAAGATCTTGCTGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IIPPGLIPLSLLLLLLALSAASP*KILLMS Trigger: ACTCATCAGCAAGATCTTCAAGGGGCTGGCAGCGGA...GAGAGCCAGCAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS TCA 90 bp | GTTTCTGTAGGTGCAGGCTGTGGTGATTTCGGCAGTGAGCTCCGCTaGATTGTGGCACCCCTGTACTATGCTTCTTGTCCAGTGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSVGAGCGDFGSELR*IVAPLYYASCPVGE Trigger: CTCTCCCACTGGACAAGAAGCATAGTACAGGGGTGCCACAATTCAGCGGAGCTCACTGCCGAAATCACCACAGCCTGCACCTACAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGACTACCTCATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTTTTTCCTTGCCCCCTTaGATGCTAATGCCCAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VGGLPHHSTWLDSSLTAAFSLPP*MLMPSP Trigger: CGGGCTGGGCATTAGCATCAAAGGGGGCAAGGAAAA...AGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGATGAGGTAGTCCTCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS CCA 90 bp | AGCTCCGCTGAATTGTGGCACCCCTGTACTATGCTTCTTGTCCAGTaGGAGAGGTCCCTGCTGATCTCTGCCCTGAAGAGATGTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAELWHPCTMLLVQ*ERSLLISALKRCVS Trigger: TGAAACACATCTCTTCAGGGCAGAGATCAGCAGGGACCTCTCCCACTGGACAAGAAGCATAGTACAGGGGTGCCACAATTCAGCGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | CAGTCAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGACACTGCAGAACGAACCATaGGTGGCAGCCCCTATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QSRNKLQAQGISGKRGGTLQNEP*VAAPMP Trigger: CGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAG...TGTCCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAACGCCCCTCTTCTGGTTaGAGATGGACTCAGGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LPVLAEHRAWASVKLHGKRPSSG*RWTQVP Trigger: AGGTACCTGAGTCCATCTCAAACCAGAAGAGGGGCG...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGTGCTGGCAGAACACAGGGCATGGGCTAGCGTAAAACTCCATGGAAAATTTTCCTTGCCCCCTTaGATGCTAATGCCCAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPVLAEHRAWASVKLHGKFSLPP*MLMPSP Trigger: CGGGCTGGGCATTAGCATCAAAGGGGGCAAGGAAAA...TTTTCCATGGAGTTTTACGCTAGCCCATGCCCTGTGTTCTGCCAGCACTGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTGAGGAAGCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTTGCATGGGTGGTGCCAGTTCGTGTaGCAAAGGACAGATCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TELRKPNPGPLGSFALHGWCQFV*QRTDPS Trigger: GGATGGATCTGTCCTTTGCAACACGAACTGGCACCA...CCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCTCAGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS CCA 90 bp | CCCATCCAATCTCAGACACCGGGGACCCTTTCTTCACGTAAGGTGTaGCTTCTCTCATATACTTCACTTCCAGCAGCACTTCCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PIQSQTPGTLSSRKV*LLSYTSLPAALPCL Trigger: CAGGCAAGGAAGTGCTGCTGGAAGTGAAGTATATGAGAGAAGCCACACCTTACGTGAAGAAAGGGTCCCCGGTGTCTGAGATTGGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
||
| CDS-3UTR CAA 90 bp | ATCATTCCACCTGGCTTGATTCCTCTCTCACTGCTGCTGCTGCTGCTGGCTCTCATGAGTATGGGCATCTaGTTTTCCTTGCCCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IIPPGLIPLSLLLLLLALMSMGI*FSLPPL Trigger: CAAAGGGGGCAAGGAAAACAAGATGCCCATACTCAT...GAGAGCCAGCAGCAGCAGCAGCAGTGAGAGAGGAATCAAGCCAGGTGGAATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CAA 90 bp | AATTACCAGACTAATGAATCCAGGCTCGGGCAACTGAGGAAGAATCTACCAAGTCTGCAGAACGAACCATaGGTGGCAGCCCCTATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NYQTNESRLGQLRKNLPSLQNEP*VAAPMP Trigger: CGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAG...ACTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTGAGGAAGCCAAATCCTGGGCCTTTAGGCAGTTTCGCTTTGCATGGGATGAGTATGGGCATCTaGTTTTCCTTGCCCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TELRKPNPGPLGSFALHGMSMGI*FSLPPL Trigger: CAAAGGGGGCAAGGAAAACAAGATGCCCATACTCAT...CCCATGCAAAGCGAAACTGCCTAAAGGCCCAGGATTTGGCTTCCTCAGCTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGGCCCACATACAGGGCTaGGGTCTGATCCGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRAHIQG*GLIRCQ Trigger: CTGGCAGCGGATCAGACCCAAGCCCTGTATGTGGGC...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGTAAGAGTCTTCAGGATAGTCTTGCAATTGAAACAGTCCACTTTGCTTCAGGCGCTGAACCAGGCTaGGGCAGTGGCAGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCKSLQDSLAIETVHFASGAEPG*GSGRVL Trigger: AAGGACTCTGCCACTGCCCAAGCCTGGTTCAGCGCC...TGAAGCAAAGTGGACTGTTTCAATTGCAAGACTATCCTGAAGACTCTTACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | GGAACAGGTATAACTATCCATTTCTCATCTGCTCGGCTCTGGCTTACCTGGGTGGGCATCTTGTTTTCCTaGCCCCCTTTGATGCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: GTGITIHFSSARLWLTWVGILFS*PPLMLM Trigger: CATTAGCATCAAAGGGGGCAAGGAAAACAAGATGCC...CACCCAGGTAAGCCAGAGCCGAGCAGATGAGAAATGGATAGTTATACCTGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
||
| CDS-3UTR CAA 90 bp | GAGCAGTCAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGGGCATCTTGTTTTCCTaGCCCCCTTTGATGCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: EQSRNKLQAQGISGKRGGGILFS*PPLMLM Trigger: CATTAGCATCAAAGGGGGCAAGGAAAACAAGATGCC...CCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTGACTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CAA 90 bp | CAAGAAATAAACTGCAGGCCCAGGGAATCAGTGGAAAAAGAGGAGGGACAAAGCAGCCCCTTGAAGATCTaGCTGATGAGTATGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: QEINCRPRESVEKEEGQSSPLKI*LMSMGI Trigger: GATGCCCATACTCATCAGCAAGATCTTCAAGGGGCT...GCTTTGTCCCTCCTCTTTTTCCACTGATTCCCTGGGCCTGCAGTTTATTTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110200.3 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGATACGACGTGTACATTCACCTGCCCTCACCTCTTTGTTCTGATCTATCCGCTGCCAGCCCCTaGAAGATCTTGCTGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FKRYDVYIHLPSPLCSDLSAASP*KILLMS Trigger: ACTCATCAGCAAGATCTTCAAGGGGCTGGCAGCGGA...TAGATCAGAACAAAGAGGTGAGGGCAGGTGAATGTACACGTCGTATCTTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR CAA 90 bp | TTTAAAAGATACGACGTGTACATTCACCTGCCCTCACCTCTTTGTTCTGATCTAGTGAGCTCCGCTGAATaGTGGCACCCCTGTACTATG | + |
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Preference number: 5 (lower is better) Translates to: FKRYDVYIHLPSPLCSDLVSSAE*WHPCTM Trigger: CATAGTACAGGGGTGCCACAATTCAGCGGAGCTCAC...TAGATCAGAACAAAGAGGTGAGGGCAGGTGAATGTACACGTCGTATCTTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR CAA 90 bp | AGAGATGCTTTCCATTACTTAAAATGCATGTGCATGGGAACAGGCAGAAACAGGAGCCCCTTGAAGATCTaGCTGATGAGTATGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: RDAFHYLKCMCMGTGRNRSPLKI*LMSMGI Trigger: GATGCCCATACTCATCAGCAAGATCTTCAAGGGGCT...CCTGTTTCTGCCTGTTCCCATGCACATGCATTTTAAGTAATGGAAAGCATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR CAA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAAGGAGTGAAGGTCCAGTaGAATCTCTCCTTCTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: SSALFHSCSTYAKENTLEGVKVQ*NLSFFA Trigger: GGCAAAGAAGGAGAGATTCAACTGGACCTTCACTCC...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS-3UTR CAA 90 bp | TCCAGTGCTCTATTTCATTCCTGTTCAACATATGCTAAGGAGAACACTTTGGAAATGTGTTTCAATTCCTaGCTTGGTGCCAGTTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: SSALFHSCSTYAKENTLEMCFNS*LGASSC Trigger: ACACGAACTGGCACCAAGCAAGGAATTGAAACACAT...TTCCAAAGTGTTCTCCTTAGCATATGTTGAACAGGAATGAAATAGAGCACTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS CCA 72 bp | GCCCGGTCCCGGAGCCCCTGCAGAACGAACCATTGGTaGCAGCCCCTATGCCGTTGTACGCCGCAGCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ARSRSPCRTNHW*QPLCRCTPQRP Trigger: AGGGCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAGGGGCTCCGGGACCGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS CCA 72 bp | GGTGCCCGGTCCCGGAGCCCCTGCAGAACGAACCATTaGTGGCAGCCCCTATGCCGTTGTACGCCGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GARSRSPCRTNH*WQPLCRCTPQR Trigger: GCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAGGGGCTCCGGGACCGGGCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS CAA 72 bp | GGGTGCCCGGTCCCGGAGCCCCTGCAGAACGAACCATaGGTGGCAGCCCCTATGCCGTTGTACGCCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: GCPVPEPLQNEP*VAAPMPLYAAA Trigger: CGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAGGGGCTCCGGGACCGGGCACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS CAA 90 bp | CCGGAGCCCCTGCAGAACGAACCATTGGTGGCAGCCCCTATGCCGTaGTACGCCGCAGCGCCCTCCTCGCAGCTCAACACCAGGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PEPLQNEPLVAAPMP*YAAAPSSQLNTRAS Trigger: GGACGCCCTGGTGTTGAGCTGCGAGGAGGGCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAGGGGCTCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS GCA 72 bp | AGCCCCTGCAGAACGAACCATTGGTGGCAGCCCCTATaGCGTTGTACGCCGCAGCGCCCTCCTCGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SPCRTNHWWQPL*RCTPQRPPRSS Trigger: TGAGCTGCGAGGAGGGCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAGGGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS GCA 72 bp | ACGCCCCTCTTCTGGTTTGAGATGGACTCAGGTACCTaGTCCGGGAGGTCGGTGAAGGCGGTGCGGACCCCG | + |
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Preference number: 6 (lower is better) Translates to: TPLFWFEMDSGT*SGRSVKAVRTP Trigger: CGGGGTCCGCACCGCCTTCACCGACCTCCCGGAGCAGGTACCTGAGTCCATCTCAAACCAGAAGAGGGGCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS CAA 72 bp | CTGCAGAACGAACCATTGGTGGCAGCCCCTATGCCGTaGTACGCCGCAGCGCCCTCCTCGCAGCTCAACACC | + |
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Preference number: 6 (lower is better) Translates to: LQNEPLVAAPMP*YAAAPSSQLNT Trigger: GGTGTTGAGCTGCGAGGAGGGCGCTGCGGCGTACAACGGCATAGGGGCTGCCACCAATGGTTCGTTCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS CAA 72 bp | GCTCCTGCTTCAGCACCTTCACGCCCCTCTTCTGGTTaGAGATGGACTCAGGTACCTGCTCCGGGAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: APASAPSRPSSG*RWTQVPAPGGR Trigger: CCGACCTCCCGGAGCAGGTACCTGAGTCCATCTCAAACCAGAAGAGGGGCGTGAAGGTGCTGAAGCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS TCA 72 bp | CTCCTGCTTCAGCACCTTCACGCCCCTCTTCTGGTTTaGGATGGACTCAGGTACCTGCTCCGGGAGGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: LLLQHLHAPLLV*DGLRYLLREVG Trigger: ACCGACCTCCCGGAGCAGGTACCTGAGTCCATCTCAAACCAGAAGAGGGGCGTGAAGGTGCTGAAGCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS GCA 72 bp | GAATGGACCAGCCTGGTAGCAAGAAGTGGATACGAATaGACCGGGCTGAACCAGGCCTCTTTCCTCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: EWTSLVARSGYE*TGLNQASFLRG Trigger: GCCACGGAGGAAAGAGGCCTGGTTCAGCCCGGTGCATTCGTATCCACTTCTTGCTACCAGGCTGGTCCATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS TCA 72 bp | GGGTCAGCAAGTCACCAGCGTTGGAATGAATGGCGCTaGACCAGGCTTGGGCAGTGGCAGAGTCCTTACTTC | + |
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Preference number: 6 (lower is better) Translates to: GSASHQRWNEWR*TRLGQWQSPYF Trigger: GAAGTAAGGACTCTGCCACTGCCCAAGCCTGGTTCAGCGCCATTCATTCCAACGCTGGTGACTTGCTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS GCA 72 bp | ACCAGGGCGTCCTCGCTCAAGTTCACCAGAACTTTATaGCAGCGATCCCGCACCAAAACTTCCAGCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: TRASSLKFTRTL*QRSRTKTSSSP Trigger: CGGACTGCTGGAAGTTTTGGTGCGGGATCGCTGGCATAAAGTTCTGGTGAACTTGAGCGAGGACGCCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS CAA 90 bp | AGAAGGACTGGGATGACAGAGGCTCTGCAGAGCCACCCCCTAATCTaGGAGACTCAGGTGGAGGTGTTTCCCATCCAATCTCAGACACCG | + |
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Preference number: 6 (lower is better) Translates to: RRTGMTEALQSHPLI*ETQVEVFPIQSQTP Trigger: CGGTGTCTGAGATTGGATGGGAAACACCTCCACCTGAGTCTCCAAGATTAGGGGGTGGCTCTGCAGAGCCTCTGTCATCCCAGTCCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS TCA 72 bp | GGTGCAGGCTGTGGTGATTTCGGCAGTGAGCTCCGCTaGATTGTGGCACCCCTGTACTATGCTTCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GAGCGDFGSELR*IVAPLYYASCP Trigger: TGGACAAGAAGCATAGTACAGGGGTGCCACAATTCAGCGGAGCTCACTGCCGAAATCACCACAGCCTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS GCA 72 bp | CTCTCTCCGGGCACCTTTTCTGCAAGCCAGCCAAGATaGCTGATCTCACGACTGCCAGCAATGCCTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LSPGTFSASQPR*LISRLPAMPVF Trigger: GAAAACAGGCATTGCTGGCAGTCGTGAGATCAGGCATCTTGGCTGGCTTGCAGAAAAGGTGCCCGGAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS CCA 72 bp | GCTGTGGTGATTTCGGCAGTGAGCTCCGCTGAATTGTaGCACCCCTGTACTATGCTTCTTGTCCAGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: AVVISAVSSAEL*HPCTMLLVQWE Trigger: CTCCCACTGGACAAGAAGCATAGTACAGGGGTGCCACAATTCAGCGGAGCTCACTGCCGAAATCACCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS CAA 72 bp | CTGATGAGTATGGGCATCTTGTTTTCCTTGCCCCCTTaGATGCTAATGCCCAGCCCGCCCAGCTCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LMSMGILFSLPP*MLMPSPPSSCF Trigger: GAAGCAGGAGCTGGGCGGGCTGGGCATTAGCATCAAAGGGGGCAAGGAAAACAAGATGCCCATACTCATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039769.13 ENSMUST00000110200.3 |
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| CDS CAA 72 bp | CAGGCTGTGGTGATTTCGGCAGTGAGCTCCGCTGAATaGTGGCACCCCTGTACTATGCTTCTTGTCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: QAVVISAVSSAE*WHPCTMLLVQW Trigger: CCACTGGACAAGAAGCATAGTACAGGGGTGCCACAATTCAGCGGAGCTCACTGCCGAAATCACCACAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS CAA 72 bp | GTCACCAGCGTTGGAATGAATGGCGCTGAACCAGGCTaGGGCAGTGGCAGAGTCCTTACTTCTCAGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: VTSVGMNGAEPG*GSGRVLTSQNH Trigger: GTGATTCTGAGAAGTAAGGACTCTGCCACTGCCCAAGCCTGGTTCAGCGCCATTCATTCCAACGCTGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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| CDS CAA 72 bp | GATGTGTTTCAATTCCTTGCTTGGTGCCAGTTCGTGTaGCAAAGGACAGATCCATCCCAGCCTGGGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: DVFQFLAWCQFV*QRTDPSQPGVI Trigger: GATCACCCCAGGCTGGGATGGATCTGTCCTTTGCAACACGAACTGGCACCAAGCAAGGAATTGAAACACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039769.13 |
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