Pregenerated sensors for SNTA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027488Ensembl transcript IDs: ENSMUST00000028991.7, ENSMUST00000109728.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGATCTCAGGGTGGCTTAGAGGCCTCCAGGAGGCCTGGCAGCTCTaGTGTTGGCTGGGGACGGGATCCACACAGGGTCAGGTCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: EISGWLRGLQEAWQL*CWLGTGSTQGQVPG Trigger: GCCTGGGACCTGACCCTGTGTGGATCCCGTCCCCAGCCAACAGCAGAGCTGCCAGGCCTCCTGGAGGCCTCTAAGCCACCCTGAGATCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| 3UTR GCA 90 bp | AGGCTGCCCAACACAAGCCAGACTCGCTGTCCCAGGTCTGAGTTCTaGTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RLPNTSQTRCPRSEF*FLRLVSEALVPLLS Trigger: GGAGAGGAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGGACAGCGAGTCTGGCTTGTGTTGGGCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| 3UTR-3UTR GCA 90 bp | CCACGGGGCTCAAGGGGAAGTGAACAGAAAGGCTCCTCTTCTTCCTCTTGCCACGAGGCCTGGCAGCTCTaGTGTTGGCTGGGGACGGGA | + |
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Preference number: 2 (lower is better) Translates to: PRGSRGSEQKGSSSSSCHEAWQL*CWLGTG Trigger: TCCCGTCCCCAGCCAACAGCAGAGCTGCCAGGCCTC...GTGGCAAGAGGAAGAAGAGGAGCCTTTCTGTTCACTTCCCCTTGAGCCCCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| 3UTR-3UTR CCA 90 bp | CCACGGGGCTCAAGGGGAAGTGAACAGAAAGGCTCCTCTTCTTCCTCTTGCCACGTCCCAGGCTCGGAATaGCTTCTGTGTACACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: PRGSRGSEQKGSSSSSCHVPGSE*LLCTQN Trigger: ATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGAC...GTGGCAAGAGGAAGAAGAGGAGCCTTTCTGTTCACTTCCCCTTGAGCCCCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTAGGTCGCTGTCCCAGGTCTaGGTTCTGCTTCCTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LCTQNISLRKALVEVSSRSLSQV*VLLPQA Trigger: AGCCTGAGGAAGCAGAACTCAGACCTGGGACAGCGA...CCTACTGCTCACCTCCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGTCTTCCTCTTGCCACTaGCCCAGAAGACTCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AAIVLTGCLLFKMKEGRESSSCH*PRRLQL Trigger: CAGCTGGAGTCTTCTGGGTCAGTGGCAAGAGGAAGA...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| 3UTR GCA 72 bp | AACACAAGCCAGACTCGCTGTCCCAGGTCTGAGTTCTaGTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: NTSQTRCPRSEF*FLRLVSEALVP Trigger: GGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGGACAGCGAGTCTGGCTTGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGCTGGCAGCTCTGCTGTaGGCTGGGGACGGGATCCAC | + |
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Preference number: 3 (lower is better) Translates to: AAIVLTGCLLFKMKEGRELAALL*AGDGIH Trigger: GTGGATCCCGTCCCCAGCCAACAGCAGAGCTGCCAG...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCGCTCAGCGGCGCCGTTaGGCTGCGCGGGCTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PRSEFCFLRLVSEALVPLAQRRR*AARAPA Trigger: AGCCGGAGCCCGCGCAGCTCAACGGCGCCGCTGAGC...GAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCGCTGTCGGAGCAGCATaGCTCGGGCTGCTCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PLPSLSPQTSRQSAEGQVAVGAA*LGLLQA Trigger: AGCCTGGAGCAGCCCGAGCCATGCTGCTCCGACAGC...GACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGGGAGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | CCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCAGGCCAAGAGCCCCAAGCGGGTaGCCTTGGCGGACAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PSLSPQTSRQSAEGQVRPRAPSG*PWRTGK Trigger: CTTTCCTGTCCGCCAAGGTCACCCGCTTGGGGCTCT...TGGCCTGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | TGTCCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCGTTCCAGCAACCCGGTaGGCGGAGCGCGCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CPRSEFCFLRLVSEALVPVPATR*AERACL Trigger: CAGGCAGGCGCGCTCCGCGCACCGGGTTGCTGGAAC...GGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | CCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCAGGCCATGTGCACAGACAGGCTaGAGGGACGGCCGTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: PSLSPQTSRQSAEGQVRPCAQTG*RDGRST Trigger: CGTGGAACGGCCGTCCCTGCAGCCTGTCTGTGCACA...TGGCCTGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCTGCCCAACACAAGCCAGACTCGCTGTCCCAGGTCTGAGTTCTGCTTCCGAGCAGCAGCGCTTCTaGCAGCTGTGGGGGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: EGCPTQARLAVPGLSSASEQQRF*QLWGRR Trigger: GCGGCGCCCCCACAGCTGCCAGAAGCGCTGCTGCTC...GGAAGCAGAACTCAGACCTGGGACAGCGAGTCTGGCTTGTGTTGGGCAGCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCCTCGTCACGCGGCGCCGCTaGAGCAGCAGCGCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RSEFCFLRLVSEALVPLLVTRRR*SSSASG Trigger: GCCAGAAGCGCTGCTGCTCCAGCGGCGCCGCGTGAC...GAGGAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | CCACGGGGCTCAAGGGGAAGTGAACAGAAAGGCTCCTCTTCTTCCTCTTGCCACCAGCAGGGCCAGGGTTaGTGCCGTTCCCCCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGSRGSEQKGSSSSSCHQQGQG*CRSPAG Trigger: CCCAGCGGGGGAACGGCACCAACCCTGGCCCTGCTG...GTGGCAAGAGGAAGAAGAGGAGCCTTTCTGTTCACTTCCCCTTGAGCCCCGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCCTCCGTGTTTGGCCTCACTaGGGTTCCGGGGTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSEFCFLRLVSEALVPLLRVWPH*GSGVGG Trigger: GCCCCCAACCCCGGAACCTCAGTGAGGCCAAACACG...GAGGAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | CCTCTCCCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCTCCACACTGAACAGGTaGGTGTCCACACCGTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: PLPSLSPQTSRQSAEGQVSTLNR*VSTPCR Trigger: ACGGCACGGTGTGGACACTCACCTGTTCAGTGTGGA...GACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGGGAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | GCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGGTTCCAGCAACCCGGTaGGCGGAGCGCGCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AGSQQKDRSGHKMNDPLQVPATR*AERACL Trigger: CAGGCAGGCGCGCTCCGCGCACCGGGTTGCTGGAAC...CTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGACTGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCATTGGAGGGGCCTGAGTaGACCAGCCTGGTGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: LSLPSAPRRAGSQQKDRSLEGPE*TSLVAM Trigger: CATTGCCACCAGGCTGGTGCACTCAGGCCCCTCCAA...TGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | TCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGGGCTGGTGGAGCAGCAGCGCTTCTaGCAGCTGTGGGGGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SAEGQVRPQDERSSSGLVEQQRF*QLWGRR Trigger: GCGGCGCCCCCACAGCTGCCAGAAGCGCTGCTGCTC...CACCAGCCCTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | CCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACCTTGCCTGTCTTCTTaGGGGCCTGTACCGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PSLSPQTSRQSAEGQVRPPCLSS*GPVPLH Trigger: ATGAAGCGGTACAGGCCCTCAAGAAGACAGGCAAGG...TGGCCTGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCGCCAGCCAATCTGCTTaGTGTCCTGGCTCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRSEFCFLRLVSEALVPLASQSA*CPGSQL Trigger: CAGCTGGGAGCCAGGACATCAAGCAGATTGGCTGGC...GAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCGCGGCGACTCCACACTaGACAGGTGAGTGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: PRSEFCFLRLVSEALVPLAATPH*TGECPH Trigger: GTGTGGACACTCACCTGTTCAGTGTGGAGTCGCCGC...GAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | AGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACAAGATGAAAGAGCCCCAAGCGGGTaGCCTTGGCGGACAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SPQTSRQSAEGQVRPQDERAPSG*PWRTGK Trigger: CTTTCCTGTCCGCCAAGGTCACCCGCTTGGGGCTCT...TTCATCTTGTGGCCTGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | AGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCCTCTGTGCACAGACAGGCTaGAGGGACGGCCGTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: RSEFCFLRLVSEALVPLLCAQTG*RDGRST Trigger: CGTGGAACGGCCGTCCCTGCAGCCTGTCTGTGCACA...GAGGAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGGTGAGCAGTAGGAAGGCTGCCCAACACAAGCCAGACTCGCTGTCCCAGCCCATGACCTTGCGCTaGCCTCATCCTTGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VEVSSRKAAQHKPDSLSQPMTLR*PHPWPS Trigger: TGAGGGCCAAGGATGAGGCCAGCGCAAGGTCATGGG...CTGGGACAGCGAGTCTGGCTTGTGTTGGGCAGCCTTCCTACTGCTCACCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGGCTCAGCGGCGCCGTTaGGCTGCGCGGGCTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: AAIVLTGCLLFKMKEGREAQRRR*AARAPA Trigger: AGCCGGAGCCCGCGCAGCTCAACGGCGCCGCTGAGC...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | TGTCCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCGCGGCGACTCCACACTaGACAGGTGAGTGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: CPRSEFCFLRLVSEALVPAATPH*TGECPH Trigger: GTGTGGACACTCACCTGTTCAGTGTGGAGTCGCCGC...GGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | TCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGGGCTGGTGGCTGTCGGAGCAGCATaGCTCGGGCTGCTCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SAEGQVRPQDERSSSGLVAVGAA*LGLLQA Trigger: AGCCTGGAGCAGCCCGAGCCATGCTGCTCCGACAGC...CACCAGCCCTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | GTGGAGGTGAGCAGTAGGAAGGCTGCCCAACACAAGCCAGACTCGCTGTCCCAGCCTTGCCTGTCTTCTTaGGGGCCTGTACCGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VEVSSRKAAQHKPDSLSQPCLSS*GPVPLH Trigger: ATGAAGCGGTACAGGCCCTCAAGAAGACAGGCAAGG...CTGGGACAGCGAGTCTGGCTTGTGTTGGGCAGCCTTCCTACTGCTCACCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | TCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTAGGAAGGCTGCCCAACACAAGCGTGTTTGGCCTCACTaGGGTTCCGGGGTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLRKALVEVSSRKAAQHKRVWPH*GSGVGG Trigger: GCCCCCAACCCCGGAACCTCAGTGAGGCCAAACACG...CTTGTGTTGGGCAGCCTTCCTACTGCTCACCTCCACCAGTGCCTTTCTAAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | AGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACAAGATGAATCCACACTGAACAGGTaGGTGTCCACACCGTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SPQTSRQSAEGQVRPQDESTLNR*VSTPCR Trigger: ACGGCACGGTGTGGACACTCACCTGTTCAGTGTGGA...TTCATCTTGTGGCCTGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | CCACGGGGCTCAAGGGGAAGTGAACAGAAAGGCTCCTCTTCTTCCTCTTGCCACCAGGCTGCCAGCTCTTaGGGCGACTCCACACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PRGSRGSEQKGSSSSSCHQAASS*GDSTLN Trigger: GTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTG...GTGGCAAGAGGAAGAAGAGGAGCCTTTCTGTTCACTTCCCCTTGAGCCCCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCACCGCTTCATCGTGGGTaGCAGAGGACAAATCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LSLPSAPRRAGSQQKDRSPLHRG*QRTNLH Trigger: GTGAAGATTTGTCCTCTGCCACCCACGATGAAGCGG...TGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGGGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | CCACGGGGCTCAAGGGGAAGTGAACAGAAAGGCTCCTCTTCTTCCTCTTGCCACTGGGCTCTGGGTCAGTaGGGGTGCACCTCCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PRGSRGSEQKGSSSSSCHWALGQ*GCTSLR Trigger: TCTCAAGGAGGTGCACCCCCACTGACCCAGAGCCCA...GTGGCAAGAGGAAGAAGAGGAGCCTTTCTGTTCACTTCCCCTTGAGCCCCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | TGTCCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCTCCCAGCTGTACCTGTaGCTGTCAGCAGAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CPRSEFCFLRLVSEALVPSQLYL*LSAEPG Trigger: TCCAGGCTCTGCTGACAGCCACAGGTACAGCTGGGA...GGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | TGTCCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCGGGGGTGCACCTCCTTaGGACATACGCCATCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: CPRSEFCFLRLVSEALVPGGAPP*DIRHLQ Trigger: TTGAAGATGGCGTATGTCTCAAGGAGGTGCACCCCC...GGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | CAGGGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTGATGGCGCCCGCCCATaGCCTTGCGCTGGCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: QGQVPGSEWLLCTQNISLDGARP*PCAGLI Trigger: GATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATC...AAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCGTTTTGGGACACGAGTaGAGGTCCAGCTGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRSEFCFLRLVSEALVPLVLGHE*RSSWIS Trigger: AGAGATCCAGCTGGACCTGCACTCGTGTCCCAAAAC...GAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | GGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGACAGCAGGGCCAGGGTTaGTGCCGTTCCCCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GQVPGSEWLLCTQNISLRQQGQG*CRSPAG Trigger: CCCAGCGGGGGAACGGCACCAACCCTGGCCCTGCTG...TCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR TCA 90 bp | TGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGGACGAGGAGATGGCGCCCGCCCATaGCCTTGCGCTGGCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: CAHRLFIIQDEGGERGRGDGARP*PCAGLI Trigger: GATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATC...TCCTCGTCCTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | TCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGGGCTGGTGGGCCTCCGTCTGGTCTaGTGCCAGTCCCTTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SAEGQVRPQDERSSSGLVGLRLV*CQSLED Trigger: ATCTTCAAGGGACTGGCAGCAGACCAGACGGAGGCC...CACCAGCCCTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR GCA 90 bp | CCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCAGGCCAGGAAAAGGAGACTCGTaGCATCATCTGATGACATCT | + |
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Preference number: 4 (lower is better) Translates to: PSLSPQTSRQSAEGQVRPGKGDS*HHLMTS Trigger: AGATGTCATCAGATGATGGCACGAGTCTCCTTTTCC...TGGCCTGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTCACGCGGCGCCGCTaGAGCAGCAGCGCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSEWLLCTQNISLRKALVTRRR*SSSASG Trigger: GCCAGAAGCGCTGCTGCTCCAGCGGCGCCGCGTGAC...CAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCGCTGTCAGCAGAGCCTaGAGCTCATCTTTGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPRSEFCFLRLVSEALVPAVSRA*SSSLTQ Trigger: TTGGGTCAAAGATGAGCTCCAGGCTCTGCTGACAGC...GGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCTGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTGAAGAAGGCTGCCGCTaGAGAGGCGAGGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGQVPGSEWLLCTQNISLEEGCR*RGEAGG Trigger: ACCTCCTGCCTCGCCTCTTCAGCGGCAGCCTTCTTC...AAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGGTCAGCCAGCCAATCTaGTTGATGTCCTGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGSQQKDRSGHKMNDPLQVSQPI*LMSWLP Trigger: TGGGAGCCAGGACATCAAGCAGATTGGCTGGCTGAC...CTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGACTGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGCTGTCGGGTCCAGGCTaGCAGCTCTTGCGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: AAIVLTGCLLFKMKEGRELSGPG*QLLRRL Trigger: GAGTCGCCGCAAGAGCTGGCAGCCTGGACCCGACAG...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCCCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTGGAAAAGGAGACTCGTaGCATCATCTGATGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPFPQPPDEQAVSRRTGGKGDS*HHLMTS Trigger: AGATGTCATCAGATGATGGCACGAGTCTCCTTTTCC...ACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGGGAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGCTGTCGGGTCCAGGCTaGCAGCTCTTGCGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSEWLLCTQNISLRKALLSGPG*QLLRRL Trigger: GAGTCGCCGCAAGAGCTGGCAGCCTGGACCCGACAG...CAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGGGCTGGTGCCGCTTCATCGTGGGTaGCAGAGGACAAATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAEGQVRPQDERSSSGLVPLHRG*QRTNLH Trigger: GTGAAGATTTGTCCTCTGCCACCCACGATGAAGCGG...CACCAGCCCTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGCAGCTGCCCACAGGGTaGAGCCCTTGTCGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAIVLTGCLLFKMKEGREQLPTG*SPCRCA Trigger: TGCACATCGACAAGGGCTTCACCCTGTGGGCAGCTG...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGTTGGAGGGGCCTGAGTaGACCAGCCTGTGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAIVLTGCLLFKMKEGRELEGPE*TSLCAE Trigger: CTCTGCACACAGGCTGGTGCACTCAGGCCCCTCCAA...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028991.7 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGACAGGCTGCCAGCTCTTaGGGCGACTCCACACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQVPGSEWLLCTQNISLRQAASS*GDSTLN Trigger: GTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTG...TCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGTGTACCGCTTCATCGTaGGTGGCAGAGGACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSQQKDRSGHKMNDPLQCTASS*VAEDKS Trigger: AGATTTGTCCTCTGCCACCCACGATGAAGCGGTACA...CTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGACTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAGATCTCCAGGTACCTaGGCTCTGGGTCAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVPGSEWLLCTQNISLRRSPGT*ALGQWG Trigger: CCCCCACTGACCCAGAGCCCAGGTACCTGGAGATCT...TCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTTCCCAGCTGTACCTGTaGCTGTCAGCAGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQVPGSEWLLCTQNISLSQLYL*LSAEPG Trigger: TCCAGGCTCTGCTGACAGCCACAGGTACAGCTGGGA...AAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTGAAGAAGGCTGCCGCTaGAGAGGCGAGGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCTQNISLRKALVEVSSEEGCR*RGEAGG Trigger: ACCTCCTGCCTCGCCTCTTCAGCGGCAGCCTTCTTC...ACTGCTCACCTCCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAGTGCACCAGCCTGTGTaGAGAGCTGGTGGCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVPGSEWLLCTQNISLRVHQPV*RAGGNE Trigger: CTCATTGCCACCAGCTCTGCACACAGGCTGGTGCAC...TCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028991.7 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGTGGGCTCTGGGTCAGTaGGGGTGCACCTCCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGSEWLLCTQNISLRKALWALGQ*GCTSLR Trigger: TCTCAAGGAGGTGCACCCCCACTGACCCAGAGCCCA...CAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTAGGAGATCTCCAGGTACCTaGGCTCTGGGTCAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCTQNISLRKALVEVSSRRSPGT*ALGQWG Trigger: CCCCCACTGACCCAGAGCCCAGGTACCTGGAGATCT...CCTACTGCTCACCTCCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGCCCATGACCTTGCGCTaGCCTCATCCTTGGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGSEWLLCTQNISLRKALPMTLR*PHPWPS Trigger: TGAGGGCCAAGGATGAGGCCAGCGCAAGGTCATGGG...CAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTGCCAGCCAATCTGCTTaGTGTCCTGGCTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCTQNISLRKALVEVSSASQSA*CPGSQL Trigger: CAGCTGGGAGCCAGGACATCAAGCAGATTGGCTGGC...ACTGCTCACCTCCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGGCCTCCGTCTGGTCTaGTGCCAGTCCCTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGSEWLLCTQNISLRKALGLRLV*CQSLED Trigger: ATCTTCAAGGGACTGGCAGCAGACCAGACGGAGGCC...CAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTGCTGTCAGCAGAGCCTaGAGCTCATCTTTGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGQVPGSEWLLCTQNISLAVSRA*SSSLTQ Trigger: TTGGGTCAAAGATGAGCTCCAGGCTCTGCTGACAGC...AAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | GCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGGGGGGTGCACCTCCTTaGGACATACGCCATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARNGFCVHKISLLERHWWGGAPP*DIRHLQ Trigger: TTGAAGATGGCGTATGTCTCAAGGAGGTGCACCCCC...CCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGC 50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTAGGAAGGCTGCCCAACACAAGGCGGACAGGAAAGAGTaGATGATAAAGACCATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKALVEVSSRKAAQHKADRKE*MIKTIV Trigger: AACGATGGTCTTTATCATCCACTCTTTCCTGTCCGC...CTTGTGTTGGGCAGCCTTCCTACTGCTCACCTCCACCAGTGCCTTTCTAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTAGGGTTTTGGGACACGAGTaGAGGTCCAGCTGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCTQNISLRKALVEVSSRVLGHE*RSSWIS Trigger: AGAGATCCAGCTGGACCTGCACTCGTGTCCCAAAAC...CCTACTGCTCACCTCCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGTGTACCGCTTCATCGTaGGTGGCAGAGGACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AAIVLTGCLLFKMKEGRECTASS*VAEDKS Trigger: AGATTTGTCCTCTGCCACCCACGATGAAGCGGTACA...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTGCGGACAGGAAAGAGTaGATGATAAAGACCATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGQVPGSEWLLCTQNISLADRKE*MIKTIV Trigger: AACGATGGTCTTTATCATCCACTCTTTCCTGTCCGC...AAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGGACGAGGATCATCTGATGACATCTaGAGTTTCTCGAAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CAHRLFIIQDEGGERGRGSSDDI*SFSKGC Trigger: ACAGCCCTTCGAGAAACTTCAGATGTCATCAGATGA...TCCTCGTCCTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGATCATCTGATGACATCTaGAGTTTCTCGAAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQVPGSEWLLCTQNISLRSSDDI*SFSKGC Trigger: ACAGCCCTTCGAGAAACTTCAGATGTCATCAGATGA...TCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGCATTCACAGACAGGATaGCATCCCCAACAAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSEWLLCTQNISLRKALHSQTG*HPQQKG Trigger: CCCTTTTTGTTGGGGATGCCATCCTGTCTGTGAATG...CAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGGACGAGGAATTCTTGAAATAGGGTaGGACCTCCTTCATGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: CAHRLFIIQDEGGERGRGILEIG*DLLHVL Trigger: AAGTACATGAAGGAGGTCTCACCCTATTTCAAGAAT...TCCTCGTCCTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS TCA 90 bp | TGGAGGGGCCTGAGTGCACCAGCCTGTGTGCAGAGCTGGTGGCAATaGGCGGGGCAGTGCGGGTCGGCCTGCTCAGGGCCTCTCGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRGLSAPACVQSWWQ*AGQCGSACSGPLGS Trigger: AGAGCCGAGAGGCCCTGAGCAGGCCGACCCGCACTGCCCCGCTCATTGCCACCAGCTCTGCACACAGGCTGGTGCACTCAGGCCCCTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028991.7 |
||
| CDS TCA 90 bp | GGAGCAGCATGGCTCGGGCTGCTCCAGGCTCAGCTGCCCACAGGGTaGAGCCCTTGTCGATGTGCACAGACAGGCTGCAGGGACGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GAAWLGLLQAQLPTG*SPCRCAQTGCRDGR Trigger: ACGGCCGTCCCTGCAGCCTGTCTGTGCACATCGACAAGGGCTTCACCCTGTGGGCAGCTGAGCCTGGAGCAGCCCGAGCCATGCTGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS TCA 90 bp | CGGGTCCAGGCTGCCAGCTCTTGCGGCGACTCCACACTGAACAGGTaGGTGTCCACACCGTGCCGTGTACCCGTGCGCAGGGCAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVQAASSCGDSTLNR*VSTPCRVPVRRAKE Trigger: CTCCTTTGCCCTGCGCACGGGTACACGGCACGGTGTGGACACTCACCTGTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTGGACCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS TCA 90 bp | CCAACTGTCGGGTCCAGGCTGCCAGCTCTTGCGGCGACTCCACACTaGACAGGTGAGTGTCCACACCGTGCCGTGTACCCGTGCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PTVGSRLPALAATPH*TGECPHRAVYPCAG Trigger: CCCTGCGCACGGGTACACGGCACGGTGTGGACACTCACCTGTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTGGACCCGACAGTTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS CCA 90 bp | ATGTGCCGATCTGCGCTTGGATGGCGCCCGCCCATGACCTTGCGCTaGCCTCATCCTTGGCCCTCAAGAAGACAGCGTCCTGGCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MCRSALGWRPPMTLR*PHPWPSRRQRPGRP Trigger: CGGACGGCCAGGACGCTGTCTTCTTGAGGGCCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCAGATCGGCACAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS CCA 90 bp | GACCTTGCGCTGGCCTCATCCTTGGCCCTCAAGAAGACAGCGTCCTaGCCGTCCGCTGCACAGATCTCCAGGTACCTGGGCTCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLALASSLALKKTAS*PSAAQISRYLGSGS Trigger: TGACCCAGAGCCCAGGTACCTGGAGATCTGTGCAGCGGACGGCCAGGACGCTGTCTTCTTGAGGGCCAAGGATGAGGCCAGCGCAAGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS CCA 90 bp | AGAAGACAGCGTCCTGGCCGTCCGCTGCACAGATCTCCAGGTACCTaGGCTCTGGGTCAGTGGGGGTGCACCTCCTTGAGACATACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRQRPGRPLHRSPGT*ALGQWGCTSLRHTP Trigger: TGGCGTATGTCTCAAGGAGGTGCACCCCCACTGACCCAGAGCCCAGGTACCTGGAGATCTGTGCAGCGGACGGCCAGGACGCTGTCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGTCAGCAGGGCCAGGGTaGGTGCCGTTCCCCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSQQKDRSGHKMNDPLQSAGPG*VPFPRW Trigger: CCAGCGGGGGAACGGCACCAACCCTGGCCCTGCTGA...CTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGACTGCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCCTCTCCCTTCCCTCACCAGGCTGCCAGCTCTaGCGGCGACTCCACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CFLRLVSEALVPLLSLPSPGCQL*RRLHTE Trigger: TTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTGG...TGAGGGAAGGGAGAGGAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCAGGCCACACAGGGTGAAGCCCTaGTCGATGTGCACAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLSPQTSRQSAEGQVRPHRVKP*SMCTDR Trigger: CCTGTCTGTGCACATCGACAAGGGCTTCACCCTGTG...TGGCCTGACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS TCA 90 bp | CCAAGGTATGAATGTGCCGATCTGCGCTTGGATGGCGCCCGCCCATaGCCTTGCGCTGGCCTCATCCTTGGCCCTCAAGAAGACAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRYECADLRLDGARP*PCAGLILGPQEDSV Trigger: GACGCTGTCTTCTTGAGGGCCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCAGATCGGCACATTCATACCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS GCA 90 bp | TTCAGCAGCCCGATGACAGCCATCCACCAACTGTCGGGTCCAGGCTaGCAGCTCTTGCGGCGACTCCACACTGAACAGGTGAGTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSPMTAIHQLSGPG*QLLRRLHTEQVSVH Trigger: GTGGACACTCACCTGTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTGGACCCGACAGTTGGTGGATGGCTGTCATCGGGCTGCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS CCA 90 bp | TGCGCAGGGCAAAGGAGAGTTCTGCATCATAGGGCACTGAGCCCTTaGAGGGGCCTGAGTGCACCAGCCTGTGTGCAGAGCTGGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CAGQRRVLHHRALSP*RGLSAPACVQSWWQ Trigger: TTGCCACCAGCTCTGCACACAGGCTGGTGCACTCAGGCCCCTCCAAGGGCTCAGTGCCCTATGATGCAGAACTCTCCTTTGCCCTGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028991.7 |
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| CDS-3UTR CAA 90 bp | TCAGCAGAAGGACAGGTCAGGCCACAAGATGAACGATCCTCTTCAGGGCTGGTGCGCCCGCCCATGACCTaGCGCTGGCCTCATCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAEGQVRPQDERSSSGLVRPPMT*RWPHPW Trigger: CCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCG...CACCAGCCCTGAAGAGGATCGTTCATCTTGTGGCCTGACCTGTCCTTCTGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTCGGCTGTAGACACTTCTaGTATGCCTTCAGCAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLPSLSPQTSRQSAEGQVGCRHF*YAFSSP Trigger: CGGGCTGCTGAAGGCATACAAGAAGTGTCTACAGCC...GACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGGGAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 90 bp | AGAGCCTGGAGCTCATCTTTGACCCAAGGTATGAATGTGCCGATCTaGGCTTGGATGGCGCCCGCCCATGACCTTGCGCTGGCCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RAWSSSLTQGMNVPI*AWMAPAHDLALASS Trigger: GGATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCAGATCGGCACATTCATACCTTGGGTCAAAGATGAGCTCCAGGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CCA 90 bp | TGGAGCTCATCTTTGACCCAAGGTATGAATGTGCCGATCTGCGCTTaGATGGCGCCCGCCCATGACCTTGCGCTGGCCTCATCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WSSSLTQGMNVPICA*MAPAHDLALASSLA Trigger: GGCCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCAGATCGGCACATTCATACCTTGGGTCAAAGATGAGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CCA 90 bp | CCGCTGGGCAACTGTTCTGTCAGCCAGCCAATCTGCTTGATGTCCTaGCTCCCAGCTGTACCTGTGGCTGTCAGCAGAGCCTGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGNCSVSQPICLMS*LPAVPVAVSRAWSS Trigger: TGAGCTCCAGGCTCTGCTGACAGCCACAGGTACAGCTGGGAGCCAGGACATCAAGCAGATTGGCTGGCTGACAGAACAGTTGCCCAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | TCCTCTCCCTTCCCTCAGCCCCCAGACGAGCAGGCAGTCAGCAGAAGGACAGGTGGCTGTAGACACTTCTaGTATGCCTTCAGCAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSPFPQPPDEQAVSRRTGGCRHF*YAFSSP Trigger: CGGGCTGCTGAAGGCATACAAGAAGTGTCTACAGCC...ACCTGTCCTTCTGCTGACTGCCTGCTCGTCTGGGGGCTGAGGGAAGGGAGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 90 bp | CACGTGCAGGCTGTAGACACTTCTTGTATGCCTTCAGCAGCCCGATaGCAGCCATCCACCAACTGTCGGGTCCAGGCTGCCAGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HVQAVDTSCMPSAAR*QPSTNCRVQAASSC Trigger: GCAAGAGCTGGCAGCCTGGACCCGACAGTTGGTGGATGGCTGTCATCGGGCTGCTGAAGGCATACAAGAAGTGTCTACAGCCTGCACGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CCA 90 bp | GGCCGTCCGCTGCACAGATCTCCAGGTACCTGGGCTCTGGGTCAGTaGGGGTGCACCTCCTTGAGACATACGCCATCTTCAAAGATACGT | + |
|
Preference number: 5 (lower is better) Translates to: GRPLHRSPGTWALGQ*GCTSLRHTPSSKIR Trigger: ACGTATCTTTGAAGATGGCGTATGTCTCAAGGAGGTGCACCCCCACTGACCCAGAGCCCAGGTACCTGGAGATCTGTGCAGCGGACGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | AGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCCTCCACAGGGTGAAGCCCTaGTCGATGTGCACAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSEFCFLRLVSEALVPLLHRVKP*SMCTDR Trigger: CCTGTCTGTGCACATCGACAAGGGCTTCACCCTGTG...GAGGAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | GAAGGCTGCCCAACACAAGCCAGACTCGCTGTCCCAGGTCTGAGTTCTGCTTCCTCCTTGCCTGTCTTCTaGAGGGCCTGTACCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EGCPTQARLAVPGLSSASSLPVF*RACTAS Trigger: TGAAGCGGTACAGGCCCTCAAGAAGACAGGCAAGGA...GGAAGCAGAACTCAGACCTGGGACAGCGAGTCTGGCTTGTGTTGGGCAGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | AGGTCTGAGTTCTGCTTCCTCAGGCTGGTCTCTGAGGCCCTAGTTCCCCTCCTCTCCAACACAACCTCCTaGCCTGTCTTCTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSEFCFLRLVSEALVPLLSNTTS*PVFLRA Trigger: GGCCCTCAAGAAGACAGGCAAGGAGGTTGTGTTGGA...GAGGAGGGGAACTAGGGCCTCAGAGACCAGCCTGAGGAAGCAGAACTCAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCATTGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGTCAGCAGGGCCAGGGTaGGTGCCGTTCCCCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAIVLTGCLLFKMKEGRESAGPG*VPFPRW Trigger: CCAGCGGGGGAACGGCACCAACCCTGGCCCTGCTGA...CTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACAATGGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 90 bp | GATCTCCAGGTACCTGGGCTCTGGGTCAGTGGGGGTGCACCTCCTTaGGACATACGCCATCTTCAAAGATACGTGTTTGGCCTCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DLQVPGLWVSGGAPP*DIRHLQRYVFGLTE Trigger: CTCAGTGAGGCCAAACACGTATCTTTGAAGATGGCGTATGTCTCAAGGAGGTGCACCCCCACTGACCCAGAGCCCAGGTACCTGGAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CCA 90 bp | CATCGTGGGTGGCAGAGGACAAATCTTCACCATTCACAGACAGGATaGCATCCCCAACAAAAAGGGCCTCCGTCTGGTCTGCTGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HRGWQRTNLHHSQTG*HPQQKGPPSGLLPV Trigger: GACTGGCAGCAGACCAGACGGAGGCCCTTTTTGTTGGGGATGCCATCCTGTCTGTGAATGGTGAAGATTTGTCCTCTGCCACCCACGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | GCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGCGCCCGCCCATGACCTaGCGCTGGCCTCATCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARNGFCVHKISLLERHWWRPPMT*RWPHPW Trigger: CCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCG...CCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTCCAGGCTGCCAGCTCTaGCGGCGACTCCACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QGQVPGSEWLLCTQNISLPGCQL*RRLHTE Trigger: TTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTGG...AAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 90 bp | CCAAAGTCCAGGAAAAGGAGACTCGTGCCATCATCTGATGACATCTaGAGTTTCTCGAAGGGCTGTCGGAGCAGCATGGCTCGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PKSRKRRLVPSSDDI*SFSKGCRSSMARAA Trigger: AGCAGCCCGAGCCATGCTGCTCCGACAGCCCTTCGAGAAACTTCAGATGTCATCAGATGATGGCACGAGTCTCCTTTTCCTGGACTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 90 bp | GTCCCAGCCAACGGAGGTCCCTCCAGCAGAATTCTTGAAATAGGGTaGGACCTCCTTCATGTACTTAACCTCCAACACAACCTCCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPANGGPSSRILEIG*DLLHVLNLQHNLLA Trigger: GGCAAGGAGGTTGTGTTGGAGGTTAAGTACATGAAGGAGGTCTCACCCTATTTCAAGAATTCTGCTGGAGGGACCTCCGTTGGCTGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 90 bp | GGATCTCTCCTTCAGCACCCCCAAAGTCCAGGAAAAGGAGACTCGTaGCATCATCTGATGACATCTGAAGTTTCTCGAAGGGCTGTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSLLQHPQSPGKGDS*HHLMTSEVSRRAVG Trigger: TCCGACAGCCCTTCGAGAAACTTCAGATGTCATCAGATGATGGCACGAGTCTCCTTTTCCTGGACTTTGGGGGTGCTGAAGGAGAGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | TCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTAGGAAGGCTGCCCAACACAAGATAAAGACCATCGTTTaGGGACACGAGTGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRKALVEVSSRKAAQHKIKTIV*GHECRS Trigger: GGACCTGCACTCGTGTCCCAAAACGATGGTCTTTAT...CTTGTGTTGGGCAGCCTTCCTACTGCTCACCTCCACCAGTGCCTTTCTAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGTGTACACAAAATATCTCTCTTAGAAAGGCACTGGTGGAGGTGAGCAGTTCCTTGCCTGTCTTCTaGAGGGCCTGTACCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLCTQNISLRKALVEVSSSLPVF*RACTAS Trigger: TGAAGCGGTACAGGCCCTCAAGAAGACAGGCAAGGA...ACTGCTCACCTCCACCAGTGCCTTTCTAAGAGAGATATTTTGTGTACACAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | GGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGAATAAAGACCATCGTTTaGGGACACGAGTGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQVPGSEWLLCTQNISLRIKTIV*GHECRS Trigger: GGACCTGCACTCGTGTCCCAAAACGATGGTCTTTAT...TCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | GGTCAGGTCCCAGGCTCGGAATGGCTTCTGTGTACACAAAATATCTCTCTTAGATCTGCTGCCAGTCCCTaGAAGATCTTGGAAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GQVPGSEWLLCTQNISLRSAASP*KILEMR Trigger: TCTCATTTCCAAGATCTTCAAGGGACTGGCAGCAGA...TCTAAGAGAGATATTTTGTGTACACAGAAGCCATTCCGAGCCTGGGACCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS-3UTR CAA 90 bp | TGTGCTCACAGGCTGTTTATTATTCAAGATGAAGGAGGGGAGAGAGGACGAGGATCTGCTGCCAGTCCCTaGAAGATCTTGGAAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CAHRLFIIQDEGGERGRGSAASP*KILEMR Trigger: TCTCATTTCCAAGATCTTCAAGGGACTGGCAGCAGA...TCCTCGTCCTCTCTCCCCTCCTTCATCTTGAATAATAAACAGCCTGTGAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 72 bp | GTCAGCGCGTCCTCCGCCAGAGAGAGCAACACCCGCTaGCACCGCTCGCCACCCGCCCCGGAGCCCGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSASSARESNTR*HRSPPAPEPAP Trigger: CGGGGCGGGCTCCGGGGCGGGTGGCGAGCGGTGGCAGCGGGTGTTGCTCTCTCTGGCGGAGGACGCGCTGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CCA 72 bp | CCGGCGTCGGCCTTGCGCACCGTCACGCGGCGCCGCTaGAGCAGCAGCGCTTCTGGCAGCTGTGGGGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PASALRTVTRRR*SSSASGSCGGA Trigger: GGCGCCCCCACAGCTGCCAGAAGCGCTGCTGCTCCAGCGGCGCCGCGTGACGGTGCGCAAGGCCGACGCCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 72 bp | CTGAGTGCACCAGCCTGTGTGCAGAGCTGGTGGCAATaGGCGGGGCAGTGCGGGTCGGCCTGCTCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSAPACVQSWWQ*AGQCGSACSGP Trigger: AGGCCCTGAGCAGGCCGACCCGCACTGCCCCGCTCATTGCCACCAGCTCTGCACACAGGCTGGTGCACTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028991.7 |
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| CDS CAA 90 bp | TGCGCTTGGATGGCGCCCGCCCATGACCTTGCGCTGGCCTCATCCTaGGCCCTCAAGAAGACAGCGTCCTGGCCGTCCGCTGCACAGATC | + |
|
Preference number: 6 (lower is better) Translates to: CAWMAPAHDLALASS*ALKKTASWPSAAQI Trigger: GATCTGTGCAGCGGACGGCCAGGACGCTGTCTTCTTGAGGGCCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 72 bp | GCTGCCAGCTCTTGCGGCGACTCCACACTGAACAGGTaGGTGTCCACACCGTGCCGTGTACCCGTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AASSCGDSTLNR*VSTPCRVPVRR Trigger: CCTGCGCACGGGTACACGGCACGGTGTGGACACTCACCTGTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 72 bp | GGCTCAGCTGCCCACAGGGTGAAGCCCTTGTCGATGTaGACAGACAGGCTGCAGGGACGGCCGTTCCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSAAHRVKPLSM*TDRLQGRPFHV Trigger: CACGTGGAACGGCCGTCCCTGCAGCCTGTCTGTGCACATCGACAAGGGCTTCACCCTGTGGGCAGCTGAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CCA 72 bp | TCTGCGCTTGGATGGCGCCCGCCCATGACCTTGCGCTaGCCTCATCCTTGGCCCTCAAGAAGACAGCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SALGWRPPMTLR*PHPWPSRRQRP Trigger: AGGACGCTGTCTTCTTGAGGGCCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CAA 72 bp | TGCCGATCTGCGCTTGGATGGCGCCCGCCCATGACCTaGCGCTGGCCTCATCCTTGGCCCTCAAGAAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: CRSALGWRPPMT*RWPHPWPSRRQ Trigger: CTGTCTTCTTGAGGGCCAAGGATGAGGCCAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCAGATCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CAA 90 bp | CCGATGACAGCCATCCACCAACTGTCGGGTCCAGGCTGCCAGCTCTaGCGGCGACTCCACACTGAACAGGTGAGTGTCCACACCGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PMTAIHQLSGPGCQL*RRLHTEQVSVHTVP Trigger: CGGCACGGTGTGGACACTCACCTGTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTGGACCCGACAGTTGGTGGATGGCTGTCATCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 72 bp | CTTGGCCCTCAAGAAGACAGCGTCCTGGCCGTCCGCTaGACAGATCTCCAGGTACCTGGGCTCTGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGPQEDSVLAVR*TDLQVPGLWVS Trigger: ACTGACCCAGAGCCCAGGTACCTGGAGATCTGTGCAGCGGACGGCCAGGACGCTGTCTTCTTGAGGGCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 72 bp | CCGATGACAGCCATCCACCAACTGTCGGGTCCAGGCTaGCAGCTCTTGCGGCGACTCCACACTGAACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PMTAIHQLSGPG*QLLRRLHTEQV Trigger: CACCTGTTCAGTGTGGAGTCGCCGCAAGAGCTGGCAGCCTGGACCCGACAGTTGGTGGATGGCTGTCATCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 72 bp | CCCCCGCTGGGCAACTGTTCTGTCAGCCAGCCAATCTaGTTGATGTCCTGGCTCCCAGCTGTACCTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPLGNCSVSQPI*LMSWLPAVPVA Trigger: AGCCACAGGTACAGCTGGGAGCCAGGACATCAAGCAGATTGGCTGGCTGACAGAACAGTTGCCCAGCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CAA 90 bp | CTCCCAGCTGTACCTGTGGCTGTCAGCAGAGCCTGGAGCTCATCTTaGACCCAAGGTATGAATGTGCCGATCTGCGCTTGGATGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPAVPVAVSRAWSSS*TQGMNVPICAWMAP Trigger: GGGCGCCATCCAAGCGCAGATCGGCACATTCATACCTTGGGTCAAAGATGAGCTCCAGGCTCTGCTGACAGCCACAGGTACAGCTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 72 bp | GCTGTAGACACTTCTTGTATGCCTTCAGCAGCCCGATaGCAGCCATCCACCAACTGTCGGGTCCAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVDTSCMPSAAR*QPSTNCRVQAA Trigger: GGCAGCCTGGACCCGACAGTTGGTGGATGGCTGTCATCGGGCTGCTGAAGGCATACAAGAAGTGTCTACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 72 bp | AGCTCATCTTTGACCCAAGGTATGAATGTGCCGATCTaGGCTTGGATGGCGCCCGCCCATGACCTTGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLTQGMNVPI*AWMAPAHDLAL Trigger: CAGCGCAAGGTCATGGGCGGGCGCCATCCAAGCGCAGATCGGCACATTCATACCTTGGGTCAAAGATGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS CCA 72 bp | CTGCACAGATCTCCAGGTACCTGGGCTCTGGGTCAGTaGGGGTGCACCTCCTTGAGACATACGCCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LHRSPGTWALGQ*GCTSLRHTPSS Trigger: TGAAGATGGCGTATGTCTCAAGGAGGTGCACCCCCACTGACCCAGAGCCCAGGTACCTGGAGATCTGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CCA 72 bp | AACTGTTCTGTCAGCCAGCCAATCTGCTTGATGTCCTaGCTCCCAGCTGTACCTGTGGCTGTCAGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NCSVSQPICLMS*LPAVPVAVSRA Trigger: GGCTCTGCTGACAGCCACAGGTACAGCTGGGAGCCAGGACATCAAGCAGATTGGCTGGCTGACAGAACAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 72 bp | GTACCTGGGCTCTGGGTCAGTGGGGGTGCACCTCCTTaGGACATACGCCATCTTCAAAGATACGTGTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VPGLWVSGGAPP*DIRHLQRYVFG Trigger: GCCAAACACGTATCTTTGAAGATGGCGTATGTCTCAAGGAGGTGCACCCCCACTGACCCAGAGCCCAGGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS GCA 72 bp | GAGTGGATGATAAAGACCATCGTTTTGGGACACGAGTaGAGGTCCAGCTGGATCTCTCCTTCAGCACCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EWMIKTIVLGHE*RSSWISPSAPP Trigger: TGGGGGTGCTGAAGGAGAGATCCAGCTGGACCTGCACTCGTGTCCCAAAACGATGGTCTTTATCATCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS CCA 72 bp | TGGCAGAGGACAAATCTTCACCATTCACAGACAGGATaGCATCCCCAACAAAAAGGGCCTCCGTCTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WQRTNLHHSQTG*HPQQKGPPSGL Trigger: CAGACCAGACGGAGGCCCTTTTTGTTGGGGATGCCATCCTGTCTGTGAATGGTGAAGATTTGTCCTCTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
||
| CDS CCA 72 bp | TTGCCTGTCTTCTTGAGGGCCTGTACCGCTTCATCGTaGGTGGCAGAGGACAAATCTTCACCATTCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LPVFLRACTASS*VAEDKSSPFTD Trigger: GTCTGTGAATGGTGAAGATTTGTCCTCTGCCACCCACGATGAAGCGGTACAGGCCCTCAAGAAGACAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 72 bp | AGGAAAAGGAGACTCGTGCCATCATCTGATGACATCTaGAGTTTCTCGAAGGGCTGTCGGAGCAGCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: RKRRLVPSSDDI*SFSKGCRSSMA Trigger: AGCCATGCTGCTCCGACAGCCCTTCGAGAAACTTCAGATGTCATCAGATGATGGCACGAGTCTCCTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS CAA 72 bp | ACCTCCTTCATGTACTTAACCTCCAACACAACCTCCTaGCCTGTCTTCTTGAGGGCCTGTACCGCTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: TSFMYLTSNTTS*PVFLRACTASS Trigger: CGATGAAGCGGTACAGGCCCTCAAGAAGACAGGCAAGGAGGTTGTGTTGGAGGTTAAGTACATGAAGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS GCA 72 bp | CTTCAGCACCCCCAAAGTCCAGGAAAAGGAGACTCGTaGCATCATCTGATGACATCTGAAGTTTCTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LQHPQSPGKGDS*HHLMTSEVSRR Trigger: CCTTCGAGAAACTTCAGATGTCATCAGATGATGGCACGAGTCTCCTTTTCCTGGACTTTGGGGGTGCTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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| CDS TCA 72 bp | AACGGAGGTCCCTCCAGCAGAATTCTTGAAATAGGGTaGGACCTCCTTCATGTACTTAACCTCCAACACAAC | + |
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Preference number: 6 (lower is better) Translates to: NGGPSSRILEIG*DLLHVLNLQHN Trigger: GTTGTGTTGGAGGTTAAGTACATGAAGGAGGTCTCACCCTATTTCAAGAATTCTGCTGGAGGGACCTCCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028991.7 ENSMUST00000109728.8 |
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