Pregenerated sensors for SNRNP70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063511Ensembl transcript IDs: ENSMUST00000074575.11, ENSMUST00000209858.2, ENSMUST00000209993.2, ENSMUST00000210514.2, ENSMUST00000211121.2, ENSMUST00000211211.2, ENSMUST00000211378.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTTCTCTGCGCTCCCGCTCGCGGTCCCGGTCCCGGTCTCTGTGTaGAAGCGGGGAGGGGCCCGGCCTCTCATCATATCGGGAAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SFSALPLAVPVPVSV*KRGGARPLIISGSV Trigger: GACACTTCCCGATATGATGAGAGGCCGGGCCCCTCCCCGCTTCCACACAGAGACCGGGACCGGGACCGCGAGCGGGAGCGCAGAGAAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR GCA 90 bp | AGCCCTTCACAGTCCGGCCCCTCTCCACATCCACGAGGACCCTCCTaGCATCTATCTTCTTGCCATCTGCGTGCTTGTAAGCGGCATACA | + |
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Preference number: 1 (lower is better) Translates to: SPSQSGPSPHPRGPS*HLSSCHLRACKRHT Trigger: TGTATGCCGCTTACAAGCACGCAGATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGGATGTGGAGAGGGGCCGGACTGTGAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR TCA 90 bp | CCGGCCTCTCATCATATCGGGAAGTGTCATCTCGGCCCGAATGCCTaGTATTCACATCTGCCCCACCTCTTCTGGTACCACCAAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PASHHIGKCHLGPNA*YSHLPHLFWYHQGH Trigger: GTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGGCATTCGGGCCGAGATGACACTTCCCGATATGATGAGAGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR GCA 90 bp | GGCCCCTCTCCACATCCACGAGGACCCTCCTGCCATCTATCTTCTTaGCATCTGCGTGCTTGTAAGCGGCATACACTGAGGTGTTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: GPSPHPRGPSCHLSS*HLRACKRHTLRCCK Trigger: CTTACAACACCTCAGTGTATGCCGCTTACAAGCACGCAGATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGGATGTGGAGAGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR GCA 90 bp | GCAAGATTAGGAGCATGTCCACTACAGGCCTCTTCATTCGGGCGCTaGCTCCATCAGATATCCATTCTCTGGGGCCATGTACCCATCACC | + |
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Preference number: 1 (lower is better) Translates to: ARLGACPLQASSFGR*LHQISILWGHVPIT Trigger: GGTGATGGGTACATGGCCCCAGAGAATGGATATCTGATGGAGGCAGCGCCCGAATGAAGAGGCCTGTAGTGGACATGCTCCTAATCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211211.2 |
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| 3UTR TCA 90 bp | AGGCACAGTACTCACAGTGCATGTCTCGTTCATGCTCATACTCGATaGAGGCATAACCACGGGGTTTTCCAGAGCGTTTACTGTATACCA | + |
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Preference number: 1 (lower is better) Translates to: RHSTHSACLVHAHTR*RHNHGVFQSVYCIP Trigger: TGGTATACAGTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTGTGAGTACTGTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCGGGGAGGGGCCCGGCCTCTCATCATATCGGGAAGTGTCATCTCGGCCCCTGCCCCACCTCTTCTaGTACCACCAAGGCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: GSGEGPGLSSYREVSSRPLPHLF*YHQGHL Trigger: GAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAG...GGGCCGAGATGACACTTCCCGATATGATGAGAGGCCGGGCCCCTCCCCGCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCTGCGCTCCCGCTCGCGGTCCCGGTCCCGGTCTCTGTGTGGAAGCGGGGCCTGATATTCACATCTaGCCCACCTCTTCTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: FLCAPARGPGPGLCVEAGPDIHI*PTSSGT Trigger: GGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGG...CCCCGCTTCCACACAGAGACCGGGACCGGGACCGCGAGCGGGAGCGCAGAGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCGCCGGGGCCTCCAGCCCTTCACAGTCCGGCCCCTCTCCACATCCACGAGGTATCTTCTTGCCATCTaGGTGCTTGTAAGCGGCATA | + |
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Preference number: 2 (lower is better) Translates to: RRRGLQPFTVRPLSTSTRYLLAI*VLVSGI Trigger: TATGCCGCTTACAAGCACGCAGATGGCAAGAAGATA...CCTCGTGGATGTGGAGAGGGGCCGGACTGTGAAGGGCTGGAGGCCCCGGCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCCGGTCTCTGTGTGGAAGCGGGGAGGGGCCCGGCCTCTCATCATATCGGGACCACGAGGACCCTCCTaGCATCTATCTTCTTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VPVSVWKRGGARPLIISGPRGPS*HLSSCH Trigger: ATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGG...TCCCGATATGATGAGAGGCCGGGCCCCTCCCCGCTTCCACACAGAGACCGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCGGTCCCGGTCTCTGTGTGGAAGCGGGGAGGGGCCCGGCCTCTCATCATTGCCATCTATCTTCTTaGCATCTGCGTGCTTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: GPGPGLCVEAGRGPASHHCHLSS*HLRACK Trigger: CTTACAAGCACGCAGATGGCAAGAAGATAGATGGCA...ATGATGAGAGGCCGGGCCCCTCCCCGCTTCCACACAGAGACCGGGACCGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCGGTCCCGAGAGCGGGAGCGTCTCCTTTCTCTCTCCTTGTCTCGTTCTCGGTCATCTCGGCCCGAATaGCTGATATTCACATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LRSRERERLLSLSLSRSRSSRPE*LIFTSA Trigger: GGCAGATGTGAATATCAGGCATTCGGGCCGAGATGA...CCGAGAACGAGACAAGGAGAGAGAAAGGAGACGCTCCCGCTCTCGGGACCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCCTGATATTCACATCTGCCCCACCTCTTCTGGTACCACCAAGGCCACCTCCGTAAGCGGCATACACTaGGGTGTTGTAAGGGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: MPDIHICPTSSGTTKATSVSGIH*GVVRGA Trigger: CGCTCCCCTTACAACACCTCAGTGTATGCCGCTTAC...GGAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGCAGATATCCATTCTCTaGGGCCATGTACCCATCACC | + |
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Preference number: 2 (lower is better) Translates to: PQRQAKVEKARKADSKIRQISIL*GHVPIT Trigger: GGTGATGGGTACATGGCCCCAGAGAATGGATATCTG...CCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211211.2 |
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| 3UTR GCA 72 bp | CAGTCCGGCCCCTCTCCACATCCACGAGGACCCTCCTaGCATCTATCTTCTTGCCATCTGCGTGCTTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: QSGPSPHPRGPS*HLSSCHLRACK Trigger: CTTACAAGCACGCAGATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGGATGTGGAGAGGGGCCGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR GCA 72 bp | AGTGTCATCTCGGCCCGAATGCCTGATATTCACATCTaGCCCACCTCTTCTGGTACCACCAAGGCCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: SVISARMPDIHI*PTSSGTTKATS Trigger: GGAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGGCATTCGGGCCGAGATGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| 3UTR GCA 72 bp | GGGTCAGAAGGAAGGGCAGAGGCACAGTACTCACAGTaGATGTCTCGTTCATGCTCATACTCGATGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: GSEGRAEAQYSQ*MSRSCSYSMKA Trigger: TGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTGTGAGTACTGTGCCTCTGCCCTTCCTTCTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| 3UTR TCA 72 bp | ACTCACAGTGCATGTCTCGTTCATGCTCATACTCGATaGAGGCATAACCACGGGGTTTTCCAGAGCGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: THSACLVHAHTR*RHNHGVFQSVY Trigger: GTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| 3UTR TCA 72 bp | TTCCAGAGCGTTTACTGTATACCATGTGGATTCTTTTaGTGGGTCCATACACCTCAAACTCTCTCCGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: FQSVYCIPCGFF*WVHTPQTLSEA Trigger: AGCTTCGGAGAGAGTTTGAGGTGTATGGACCCATCAAAAGAATCCACATGGTATACAGTAAACGCTCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR CCA 90 bp | GCGGTCCCGGTCCCGGTCTCTGTGTGGAAGCGGGGAGGGGCCCGGCCTCTCATCCATCGCCCTGAGCATTaGGATCATTGTGAGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: AVPVPVSVWKRGGARPLIHRPEH*DHCEGP Trigger: GGGACCCTCACAATGATCCCAATGCTCAGGGCGATG...GATGAGAGGCCGGGCCCCTCCCCGCTTCCACACAGAGACCGGGACCGGGACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR TCA 90 bp | GGCCACCTCCTAGGCGCCGGGGCCTCCAGCCCTTCACAGTCCGGCCCCTCTCCAGCATTGGGATCATTGTaGGGGTCCCACATTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GHLLGAGASSPSQSGPSPALGSL*GSHIFS Trigger: GCTGAAAATGTGGGACCCTCACAATGATCCCAATGC...TGGAGAGGGGCCGGACTGTGAAGGGCTGGAGGCCCCGGCGCCTAGGAGGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR GCA 90 bp | GTCTCGTTCTCGGCTTCTTTCTCTGCGCTCCCGCTCGCGGTCCCGGTCCCGGTCCAGCTGCAAGCCAGCTaGGTGGTGGAGTGCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: VSFSASFSALPLAVPVPVQLQAS*VVECMS Trigger: AGACATGCACTCCACCACGCAGCTGGCTTGCAGCTG...GACCGGGACCGGGACCGCGAGCGGGAGCGCAGAGAAAGAAGCCGAGAACGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR GCA 90 bp | GTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCCCTGCCCCGCTCACTaGCCCGCTCCCCACGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VEKARKADSKIRSMSTTGPCPAH*PAPHAC Trigger: ACAAGCGTGGGGAGCGGGGCAGTGAGCGGGGCAGGG...GCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | TCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGACATTGTCCTGACCGCTaGCACCCCCACCCCGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: STLRGKPRWKRLGRQTARHCPDR*HPHPGP Trigger: AGGCCCGGGGTGGGGGTGGCAGCGGTCAGGACAATG...TCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | CCCGGTCTCTGTGTGGAAGCGGGGAGGGGCCCGGCCTCTCATCATATCGGGAAGGGTTTCTGCTCTTGTTaGAGGAGGAGCATCTCGAGN | + |
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Preference number: 4 (lower is better) Translates to: PGLCVEAGRGPASHHIGKGFCSC*RRSISX Trigger: NCTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACC...CTTCCCGATATGATGAGAGGCCGGGCCCCTCCCCGCTTCCACACAGAGACCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCTCTCCAGCCCATTGTCCTaGCCGCTGCCACCCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: EKARKADSKIRSMSTTGLSSPLS*PLPPPP Trigger: GGGTGGGGGTGGCAGCGGTCAGGACAATGGGCTGGA...GAGGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | CCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGCTCGGCTTCTTTCTCTaGGCTCCCGCTCGCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PQRQAKVEKARKADSKIRLGFFL*APARGP Trigger: GGGACCGCGAGCGGGAGCGCAGAGAAAGAAGCCGAG...CCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | TCGGGCGCTGCCTCCATCAGATATCCATTCTCTGGGGCCATGTACCCATCACCACTGCCCCACCTCTTCTaGTACCACCAAGGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: SGAASIRYPFSGAMYPSPLPHLF*YHQGHL Trigger: GAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAG...TGGTGATGGGTACATGGCCCCAGAGAATGGATATCTGATGGAGGCAGCGCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211211.2 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCAGTCCCGGTCTCTGTGTaGAAGCGGGGAGGGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: KPRWKRLGRQTARLGACPVPVSV*KRGGAR Trigger: CCGGGCCCCTCCCCGCTTCCACACAGAGACCGGGAC...TGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | CCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGCCGGCCCTTCTCCTCTaGGCCATCAGGGCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PQRQAKVEKARKADSKIRPALLL*AIRAFR Trigger: CCTGAAGGCCCTGATGGCCCAGAGGAGAAGGGCCGG...CCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | AGCCCTTCACAGTCCGGCCCCTCTCCACATCCACGAGGACCCTCCTGCCATCTAGTCTCTTTCTCTCCATaGGTTCTTCCCGGGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPSQSGPSPHPRGPSCHLVSFSP*VLPGFL Trigger: CAGAAACCCGGGAAGAACGCATGGAGAGAAAGAGAC...TAGATGGCAGGAGGGTCCTCGTGGATGTGGAGAGGGGCCGGACTGTGAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR GCA 90 bp | GGAGCGCCTCCTCCGGTCCCGAGAGCGGGAGCGTCTCCTTTCTCTCTCCTTGTCTCTGTCTCCACTTCCTaGTGTCGCCGTTCAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: GAPPPVPRAGASPFSLLVSVSTS*CRRSIF Trigger: AAAAATTGAACGGCGACAGCAGGAAGTGGAGACAGA...GACAAGGAGAGAGAAAGGAGACGCTCCCGCTCTCGGGACCGGAGGAGGCGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR GCA 90 bp | GGAAGCGGGGAGGGGCCCGGCCTCTCATCATATCGGGAAGTGTCATCTCGGCCCTGCATGTCTCGTTCATaGTCATACTCGATGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSGEGPGLSSYREVSSRPCMSRS*SYSMKA Trigger: TGCCTTCATCGAGTATGAGCATGAACGAGACATGCA...GGGCCGAGATGACACTTCCCGATATGATGAGAGGCCGGGCCCCTCCCCGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR CCA 90 bp | CCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGCTGCCCCACCTCTTCTaGTACCACCAAGGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: PQRQAKVEKARKADSKIRLPHLF*YHQGHL Trigger: GAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAG...CCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR CCA 90 bp | ATCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGCTGCCCCACCTCTTCTaGTACCACCAAGGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: IYPQRQAKVEKARKADSKLPHLF*YHQGHL Trigger: GAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAG...CTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACAGGGGTGGCAGGTATaGGATGGGATCTCGGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KPRWKRLGRQTARLGACPQGWQV*DGISGC Trigger: GCACCCCGAGATCCCATCCCATACCTGCCACCCCTG...TGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | AAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCTCTCTCGGTCCTTGTCCTTaGTACGCTCCCTGGACCGTC | + |
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Preference number: 4 (lower is better) Translates to: KRLGRQTARLGACPLQASLGPCP*YAPWTV Trigger: GACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAG...AGAGGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | GGCTTCTTTCTCTGCGCTCCCGCTCGCGGTCCCGGTCCCGGTCTCTGTGTGGAATTACTGTATACCATGTaGATTCTTTTGATGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GFFLCAPARGPGPGLCVELLYTM*ILLMGP Trigger: TGGACCCATCAAAAGAATCCACATGGTATACAGTAA...TTCCACACAGAGACCGGGACCGGGACCGCGAGCGGGAGCGCAGAGAAAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR GCA 90 bp | TCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTCTTCCCGGGTTTCTaGTCTTGTTGGAGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: STLRGKPRWKRLGRQTARFFPGF*SCWRRS Trigger: GCTCCTCCTCCAACAAGAGCAGAAACCCGGGAAGAA...TCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | TGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCCATCGCCCTGAGCATTaGGATCATTGTGAGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: WKRLGRQTARLGACPLQAHRPEH*DHCEGP Trigger: GGGACCCTCACAATGATCCCAATGCTCAGGGCGATG...GGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | GTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCCACGAGGACCCTCCTaGCATCTATCTTCTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VEKARKADSKIRSMSTTGPRGPS*HLSSCH Trigger: ATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGG...GCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGACCACGAGGACCCTCCTaGCATCTATCTTCTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LRGKPRWKRLGRQTARLGPRGPS*HLSSCH Trigger: ATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGG...TCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | TCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGACCTGATATTCACATCTaGCCCACCTCTTCTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: STLRGKPRWKRLGRQTARPDIHI*PTSSGT Trigger: GGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGG...TCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074575.11 ENSMUST00000211211.2 |
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| CDS-3UTR CCA 90 bp | CCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAAAGGGCCAGAAGGTTaGGAGGCAGAAACTGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PQRQAKVEKARKADSKIRKGPEG*EAETVS Trigger: TGACACAGTTTCTGCCTCCCAACCTTCTGGCCCTTT...CCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | CAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCGTGGCAGGTATGGGATaGGATCTCGGGGTGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: QAKVEKARKADSKIRSMSVAGMG*DLGVQK Trigger: TTTTTGCACCCCGAGATCCCATCCCATACCTGCCAC...GGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | GCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTGGTTTCTGCTCTTGTTaGAGGAGGAGCATCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKVEKARKADSKIRSMSTGFCSC*RRSISR Trigger: CCTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACC...AGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | AAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCAGATGGGATCTCGGGGTaGAAAAAGGGCCAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPRWKRLGRQTARLGACPDGISG*KKGQKV Trigger: AACCTTCTGGCCCTTTTTGCACCCCGAGATCCCATC...TGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | TCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGACTCTCGGATGTATGGTaGAATGCCACAGTAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: STLRGKPRWKRLGRQTARLSDVW*NATVRL Trigger: CAACCTTACTGTGGCATTGCACCATACATCCGAGAG...TCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | CAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCGTCTCTTTCTCTCCATaGGTTCTTCCCGGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAKVEKARKADSKIRSMSVSFSP*VLPGFL Trigger: CAGAAACCCGGGAAGAACGCATGGAGAGAAAGAGAC...GGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR GCA 90 bp | GTCTCGTTCATGCTCATACTCGATGAAGGCATAACCACGGGGTTTTCCAGAGCGGTCTCTTTCTCTCCATaGGTTCTTCCCGGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSFMLILDEGITTGFSRAVSFSP*VLPGFL Trigger: CAGAAACCCGGGAAGAACGCATGGAGAGAAAGAGAC...CGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR GCA 90 bp | GAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCTCCCTGATATTCACATCTaGCCCACCTCTTCTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: EKARKADSKIRSMSTTGLPDIHI*PTSSGT Trigger: GGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGG...GAGGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074575.11 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | GGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTTCATCTCGGCCCGAATaGCTGATATTCACATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKPRWKRLGRQTARLGACSSRPE*LIFTSA Trigger: GGCAGATGTGAATATCAGGCATTCGGGCCGAGATGA...ACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | AGGAAGGGCAGAGGCACAGTACTCACAGTGCATGTCTCGTTCATGCTCATACTCAAAGGGCCAGAAGGTTaGGAGGCAGAAACTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGRGTVLTVHVSFMLILKGPEG*EAETVS Trigger: TGACACAGTTTCTGCCTCCCAACCTTCTGGCCCTTT...GAGTATGAGCATGAACGAGACATGCACTGTGAGTACTGTGCCTCTGCCCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR TCA 90 bp | AAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCTCTGCATTGGGATCATTGTaGGGGTCCCACATTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLGRQTARLGACPLQASALGSL*GSHIFS Trigger: GCTGAAAATGTGGGACCCTCACAATGATCCCAATGC...AGAGGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR TCA 90 bp | CAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCCTCCATGTACATGTCTaGTATTCACATCTGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAKVEKARKADSKIRSMSLHVHV*YSHLPH Trigger: GTGGGGCAGATGTGAATATCAGACATGTACATGGAG...GGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210514.2 |
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| CDS-3UTR GCA 90 bp | AAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCTCTTCTATCTTCTTGCCATCTaGGTGCTTGTAAGCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KARKADSKIRSMSTTGLFYLLAI*VLVSGV Trigger: CACTCCGCTTACAAGCACGCAGATGGCAAGAAGATA...GAAGAGGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | AAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACACCACGAGGACCCTCCTaGCATCTATCTTCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVEKARKADSKIRSMSTTPRGPS*HLSSCH Trigger: ATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGG...TGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGATCTGATATTCACATCTaGCCCACCTCTTCTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LRGKPRWKRLGRQTARLGSDIHI*PTSSGT Trigger: GGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGA...TCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210514.2 |
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| CDS-3UTR CCA 90 bp | ATCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGAAACTCTCGGATGTATaGTGCAATGCCACAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYPQRQAKVEKARKADSKKLSDV*CNATVR Trigger: CCTTACTGTGGCATTGCACCATACATCCGAGAGTTT...CTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | TCGTTCATGCTCATACTCGATGAAGGCATAACCACGGGGTTTTCCAGAGCGTTTGGTTTCTGCTCTTGTTaGAGGAGGAGCATCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFMLILDEGITTGFSRAFGFCSC*RRSISR Trigger: CCTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACC...AAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR CCA 90 bp | ATGCTCATACTCGATGAAGGCATAACCACGGGGTTTTCCAGAGCGTTTACTGTACATCGCCCTGAGCATTaGGATCATTGTGAGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MLILDEGITTGFSRAFTVHRPEH*DHCEGP Trigger: GGGACCCTCACAATGATCCCAATGCTCAGGGCGATG...TACAGTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR GCA 90 bp | GAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCTCTGCATGTCTCGTTCATaGTCATACTCGATGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKARKADSKIRSMSTTGLCMSRS*SYSMKA Trigger: TGCCTTCATCGAGTATGAGCATGAACGAGACATGCA...GAGGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | GTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCTGCATGTCTCGTTCATaGTCATACTCGATGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEKARKADSKIRSMSTTGCMSRS*SYSMKA Trigger: TGCCTTCATCGAGTATGAGCATGAACGAGACATGCA...GCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | AAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCATATCTTCTTGCCATCTaGGTGCTTGTAAGCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPRWKRLGRQTARLGACPYLLAI*VLVSGV Trigger: CACTCCGCTTACAAGCACGCAGATGGCAAGAAGATA...TGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | GGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTTGCCATCTATCTTCTTaGCATCTGCGTGCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKPRWKRLGRQTARLGACCHLSS*HLRACK Trigger: CTTACAAGCACGCAGATGGCAAGAAGATAGATGGCA...ACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | TGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTACAGGCCTGCCATCTATCTTCTTaGCATCTGCGTGCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WKRLGRQTARLGACPLQACHLSS*HLRACK Trigger: CTTACAAGCACGCAGATGGCAAGAAGATAGATGGCA...GGCCTGTAGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | GCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTTGCCATCTATCTTCTTaGCATCTGCGTGCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKVEKARKADSKIRSMSTCHLSS*HLRACK Trigger: CTTACAAGCACGCAGATGGCAAGAAGATAGATGGCA...AGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR GCA 90 bp | TACCATGTGGATTCTTTTGATGGGTCCATACACCTCAAACTCTCTCCGAAGCTTGATGGGATCTCGGGGTaGAAAAAGGGCCAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YHVDSFDGSIHLKLSPKLDGISG*KKGQKV Trigger: AACCTTCTGGCCCTTTTTGCACCCCGAGATCCCATC...AAGCTTCGGAGAGAGTTTGAGGTGTATGGACCCATCAAAAGAATCCACATGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGCATGTCTCGTTCATGCTCATACTCGATGAAGGCATAACCACGGGGTTTCTCTCGGATGTATGGTaGAATGCCACAGTAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVHVSFMLILDEGITTGFLSDVW*NATVRL Trigger: CAACCTTACTGTGGCATTGCACCATACATCCGAGAG...AAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR GCA 90 bp | AAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCATCTGTCTCCACTTCCTaGTGTCGCCGTTCAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPRWKRLGRQTARLGACPSVSTS*CRRSIF Trigger: AAAAATTGAACGGCGACAGCAGGAAGTGGAGACAGA...TGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CCA 90 bp | GTGGATTCTTTTGATGGGTCCATACACCTCAAACTCTCTCCGAAGCTTAGATTCGTGGCAGGTATGGGATaGGATCTCGGGGTGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VDSFDGSIHLKLSPKLRFVAGMG*DLGVQK Trigger: TTTTTGCACCCCGAGATCCCATCCCATACCTGCCAC...GAATCTAAGCTTCGGAGAGAGTTTGAGGTGTATGGACCCATCAAAAGAATCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR GCA 90 bp | ATGCTCATACTCGATGAAGGCATAACCACGGGGTTTTCCAGAGCGTTTACTGTATCTGTCTCCACTTCCTaGTGTCGCCGTTCAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLILDEGITTGFSRAFTVSVSTS*CRRSIF Trigger: AAAAATTGAACGGCGACAGCAGGAAGTGGAGACAGA...TACAGTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR CCA 90 bp | AAAATCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCTTACTGTATACCATGTaGATTCTTTTGATGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KIYPQRQAKVEKARKADSLLYTM*ILLMGP Trigger: TGGACCCATCAAAAGAATCCACATGGTATACAGTAA...GCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR TCA 90 bp | GGTTTTCCAGAGCGTTTACTGTATACCATGTGGATTCTTTTGATGGGTCCATACGCATTGGGATCATTGTaGGGGTCCCCTTACACATTT | + |
|
Preference number: 4 (lower is better) Translates to: GFPERLLYTMWILLMGPYALGSL*GSPYTF Trigger: AAATGTGTAAGGGGACCCTCACAATGATCCCAATGC...GTATGGACCCATCAAAAGAATCCACATGGTATACAGTAAACGCTCTGGAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR CCA 90 bp | TCTTTTGATGGGTCCATACACCTCAAACTCTCTCCGAAGCTTAGATTCTGTTGTAAACTCTCGGATGTATaGTGCAATGCCACAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFDGSIHLKLSPKLRFCCKLSDV*CNATVR Trigger: CCTTACTGTGGCATTGCACCATACATCCGAGAGTTT...ACAACAGAATCTAAGCTTCGGAGAGAGTTTGAGGTGTATGGACCCATCAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS GCA 90 bp | CCCGGCTCCGACTGCTTCGTCGCTTTCGGTCTCGGTCCTTGTCCTTaGTACGCTCCCTGGACCGTCGCCGCTCATCCTTGTCTCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSDCFVAFGLGPCP*YAPWTVAAHPCLDS Trigger: GGAGTCGAGACAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTCGGAGCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS GCA 90 bp | CCTCTTTTCGCTCCCGTTCCCTGCGTGCTCGCTCCCGGCTCCGACTaGTTCGTCGCTTTCGGTCTCGGTCCTTGTCCTTGCTACGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLFAPVPCVLAPGSD*FVAFGLGPCPCYAP Trigger: GGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTCGGAGCCGGGAGCGAGCACGCAGGGAACGGGAGCGAAAAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS GCA 90 bp | CAGCTTCAGAGGGTTCAGCCATGTCGCCGCCGCCACCACCACCACTaGCACCACCGCCACCACCTCCTCCACCTCGAAGCTCCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLQRVQPCRRRHHHH*HHRHHLLHLEAPLF Trigger: GAAAAGAGGAGCTTCGAGGTGGAGGAGGTGGTGGCGGTGGTGGCAGTGGTGGTGGTGGCGGCGGCGACATGGCTGAACCCTCTGAAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS CCA 90 bp | TGCTTCGTCGCTTTCGGTCTCGGTCCTTGTCCTTGCTACGCTCCCTaGACCGTCGCCGCTCATCCTTGTCTCGACTCCGGGAGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFVAFGLGPCPCYAP*TVAAHPCLDSGSAS Trigger: GGAGGCGCTCCCGGAGTCGAGACAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CAA 90 bp | AGCCCTTCACAGTCCGGCCCCTCTCCACATCCACGAGGACCCTCCTGCCATCTAGGGTTTCTGCTCTTGTaGGAGGAGGAGCATCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSQSGPSPHPRGPSCHLGFLLL*EEEHLE Trigger: CTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACCC...TAGATGGCAGGAGGGTCCTCGTGGATGTGGAGAGGGGCCGGACTGTGAAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS GCA 90 bp | AGCCCTTCACAGTCCGGCCCCTCTCCACATCCACGAGGACCCTCCTaGCATCTATCTTCTTGCCATCTGCGTGCTTGTAAGCGGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSQSGPSPHPRGPS*HLSSCHLRACKRSA Trigger: TGCACTCCGCTTACAAGCACGCAGATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGGATGTGGAGAGGGGCCGGACTGTGAAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS GCA 90 bp | GGCCCCTCTCCACATCCACGAGGACCCTCCTGCCATCTATCTTCTTaGCATCTGCGTGCTTGTAAGCGGAGTGCATGTCTCGTTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSPHPRGPSCHLSS*HLRACKRSACLVHA Trigger: AGCATGAACGAGACATGCACTCCGCTTACAAGCACGCAGATGGCAAGAAGATAGATGGCAGGAGGGTCCTCGTGGATGTGGAGAGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS-3UTR CAA 90 bp | ATCTACCCTCAGAGGCAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGCCCGGGTTTCTGCTCTaGTTGGAGGAGGAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: IYPQRQAKVEKARKADSKPGFLL*LEEEHL Trigger: GAGATGCTCCTCCTCCAACAAGAGCAGAAACCCGGG...CTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTGCCTCTGAGGGTAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CAA 90 bp | TCATCTCGGCCCGAATGCCTGATATTCACATCTGCCCCACCTCTTCTGGTACCACCCGGGTTTCTGCTCTaGTTGGAGGAGGAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRPECLIFTSAPPLLVPPGFLL*LEEEHL Trigger: GAGATGCTCCTCCTCCAACAAGAGCAGAAACCCGGG...TGGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGGCATTCGGGCCGAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS CCA 90 bp | CCGTCTCTTTCTCTCCATGCGTTCTTCCCGGGTTTCTGCTCTTGTTaGAGGAGGAGCATCTCGAGGGTCCTCAAACTCTCGGATGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLSLHAFFPGFCSC*RRSISRVLKLSDVW Trigger: CCATACATCCGAGAGTTTGAGGACCCTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACCCGGGAAGAACGCATGGAGAGAAAGAGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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| CDS-3UTR CAA 90 bp | GCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCACTTTTCGGTCTCGGTCCTaGTCCTTGCTACGCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKVEKARKADSKIRSMSTFRSRS*SLLRSL Trigger: CAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAA...AGTGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCAGGGTTTCTGCTCTTGTaGGAGGAGGAGCATCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KPRWKRLGRQTARLGACPGFLLL*EEEHLE Trigger: CTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACCC...TGGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
||
| CDS TCA 90 bp | CCAGCTGCGTGGTGGAGTGCATGTCTCGTTCATGCTCATACTCGATaGAGGCATAACCACGGGGTTTTCCAGAGCGTTTACTGTATACCA | + |
|
Preference number: 5 (lower is better) Translates to: PAAWWSACLVHAHTR*RHNHGVFQSVYCIP Trigger: TGGTATACAGTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTCCACCACGCAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS-3UTR CAA 90 bp | CTCATACTCGATGAAGGCATAACCACGGGGTTTTCCAGAGCGTTTACTGTATACCCCGGGTTTCTGCTCTaGTTGGAGGAGGAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LILDEGITTGFSRAFTVYPGFLL*LEEEHL Trigger: GAGATGCTCCTCCTCCAACAAGAGCAGAAACCCGGG...GTATACAGTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS TCA 90 bp | CGTGCTTGTAAGCGGAGTGCATGTCTCGTTCATGCTCATACTCGATaGAGGCATAACCACGGGGTTTTCCAGAGCGTTTACTGTATACCA | + |
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Preference number: 5 (lower is better) Translates to: RACKRSACLVHAHTR*RHNHGVFQSVYCIP Trigger: TGGTATACAGTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTCCGCTTACAAGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS GCA 90 bp | GAGGAGCATCTCGAGGGTCCTCAAACTCTCGGATGTATGGTGCAATaGCACAGTAAGGTTGGTTATGGTGTTTTTCATGTGGCAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: EEHLEGPQTLGCMVQ*HSKVGYGVFHVAAF Trigger: AAAAGCTGCCACATGAAAAACACCATAACCAACCTTACTGTGGCATTGCACCATACATCCGAGAGTTTGAGGACCCTCGAGATGCTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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| CDS-3UTR CAA 90 bp | GGGTTTTCCAGAGCGTTTACTGTATACCATGTGGATTCTTTTGATGGGTCCATAGGGTTTCTGCTCTTGTaGGAGGAGGAGCATCTCGAG | + |
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Preference number: 5 (lower is better) Translates to: GFSRAFTVYHVDSFDGSIGFLLL*EEEHLE Trigger: CTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACCC...TATGGACCCATCAAAAGAATCCACATGGTATACAGTAAACGCTCTGGAAAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS-3UTR CAA 90 bp | CAAGCCAAGGTGGAAAAGGCTAGGAAGGCAGACAGCAAGATTAGGAGCATGTCCAATGCCACAGTAAGGTaGGTTATGGTGTTTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: QAKVEKARKADSKIRSMSNATVR*VMVFFM Trigger: CATGAAAAACACCATAACCAACCTTACTGTGGCATT...GGACATGCTCCTAATCTTGCTGTCTGCCTTCCTAGCCTTTTCCACCTTGGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS-3UTR CAA 90 bp | TCTTTTGATGGGTCCATACACCTCAAACTCTCTCCGAAGCTTAGATTCTGTTGTAATGCCACAGTAAGGTaGGTTATGGTGTTTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: SFDGSIHLKLSPKLRFCCNATVR*VMVFFM Trigger: CATGAAAAACACCATAACCAACCTTACTGTGGCATT...ACAACAGAATCTAAGCTTCGGAGAGAGTTTGAGGTGTATGGACCCATCAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211378.2 |
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| CDS CAA 90 bp | CGGTCCTTGTCCTTGCTACGCTCCCTGGACCGTCGCCGCTCATCCTaGTCTCGACTCCGGGAGCGCCTCCTCCGGTCCCGAGAGCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RSLSLLRSLDRRRSS*SRLRERLLRSRERE Trigger: CTCCCGCTCTCGGGACCGGAGGAGGCGCTCCCGGAGTCGAGACAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS GCA 72 bp | AGGGTTCAGCCATGTCGCCGCCGCCACCACCACCACTaGCACCACCGCCACCACCTCCTCCACCTCGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: RVQPCRRRHHHH*HHRHHLLHLEA Trigger: AGCTTCGAGGTGGAGGAGGTGGTGGCGGTGGTGGCAGTGGTGGTGGTGGCGGCGGCGACATGGCTGAACCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS CAA 72 bp | TCCTTGCTACGCTCCCTGGACCGTCGCCGCTCATCCTaGTCTCGACTCCGGGAGCGCCTCCTCCGGTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SLLRSLDRRRSS*SRLRERLLRSR Trigger: TCGGGACCGGAGGAGGCGCTCCCGGAGTCGAGACAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS GCA 72 bp | GCTCCCGTTCCCTGCGTGCTCGCTCCCGGCTCCGACTaGTTCGTCGCTTTCGGTCTCGGTCCTTGTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: APVPCVLAPGSD*FVAFGLGPCPC Trigger: GCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTCGGAGCCGGGAGCGAGCACGCAGGGAACGGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS CAA 72 bp | CGGCTCCGACTGCTTCGTCGCTTTCGGTCTCGGTCCTaGTCCTTGCTACGCTCCCTGGACCGTCGCCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RLRLLRRFRSRS*SLLRSLDRRRS Trigger: TGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTCGGAGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS CAA 90 bp | GCTCGCTCCCGGCTCCGACTGCTTCGTCGCTTTCGGTCTCGGTCCTaGTCCTTGCTACGCTCCCTGGACCGTCGCCGCTCATCCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ARSRLRLLRRFRSRS*SLLRSLDRRRSSLS Trigger: AGACAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTCGGAGCCGGGAGCGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS CAA 90 bp | TCCCGGCTCCGACTGCTTCGTCGCTTTCGGTCTCGGTCCTTGTCCTaGCTACGCTCCCTGGACCGTCGCCGCTCATCCTTGTCTCGACTC | + |
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Preference number: 6 (lower is better) Translates to: SRLRLLRRFRSRSLS*LRSLDRRRSSLSRL Trigger: GAGTCGAGACAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTCGGAGCCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS CAA 72 bp | CGACTGCTTCGTCGCTTTCGGTCTCGGTCCTTGTCCTaGCTACGCTCCCTGGACCGTCGCCGCTCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RLLRRFRSRSLS*LRSLDRRRSSL Trigger: CAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS GCA 72 bp | GACTGCTTCGTCGCTTTCGGTCTCGGTCCTTGTCCTTaGTACGCTCCCTGGACCGTCGCCGCTCATCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DCFVAFGLGPCP*YAPWTVAAHPC Trigger: ACAAGGATGAGCGGCGACGGTCCAGGGAGCGTAGCAAGGACAAGGACCGAGACCGAAAGCGACGAAGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074575.11 |
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| CDS GCA 72 bp | CTAGCCCTTCCAGCCCATTGTCCTGATATTCACATCTaGCCCACCTCTTCTGGTACCACCAAGGCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: LALPAHCPDIHI*PTSSGTTKATS Trigger: GGAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGGACAATGGGCTGGAAGGGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211211.2 |
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| CDS GCA 72 bp | CCCTCTGCCTCCATGTACATGTCTGATATTCACATCTaGCCCACCTCTTCTGGTACCACCAAGGCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSASMYMSDIHI*PTSSGTTKATS Trigger: GGAGGTGGCCTTGGTGGTACCAGAAGAGGTGGGGCAGATGTGAATATCAGACATGTACATGGAGGCAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210514.2 |
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| CDS CCA 72 bp | TCTCTCCATGCGTTCTTCCCGGGTTTCTGCTCTTGTTaGAGGAGGAGCATCTCGAGGGTCCTCAAACTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SLHAFFPGFCSC*RRSISRVLKLS Trigger: CGAGAGTTTGAGGACCCTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACCCGGGAAGAACGCATGGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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| CDS CAA 72 bp | TTCTCTCCATGCGTTCTTCCCGGGTTTCTGCTCTTGTaGGAGGAGGAGCATCTCGAGGGTCCTCAAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: FSPCVLPGFLLL*EEEHLEGPQTL Trigger: GAGAGTTTGAGGACCCTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACCCGGGAAGAACGCATGGAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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| CDS CAA 72 bp | TCTTTCTCTCCATGCGTTCTTCCCGGGTTTCTGCTCTaGTTGGAGGAGGAGCATCTCGAGGGTCCTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: SFSPCVLPGFLL*LEEEHLEGPQT Trigger: AGTTTGAGGACCCTCGAGATGCTCCTCCTCCAACAAGAGCAGAAACCCGGGAAGAACGCATGGAGAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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| CDS TCA 72 bp | AAGCGGAGTGCATGTCTCGTTCATGCTCATACTCGATaGAGGCATAACCACGGGGTTTTCCAGAGCGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: KRSACLVHAHTR*RHNHGVFQSVY Trigger: GTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTCCGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074575.11 ENSMUST00000210514.2 ENSMUST00000211211.2 |
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| CDS TCA 72 bp | TGGTGGAGTGCATGTCTCGTTCATGCTCATACTCGATaGAGGCATAACCACGGGGTTTTCCAGAGCGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: WWSACLVHAHTR*RHNHGVFQSVY Trigger: GTAAACGCTCTGGAAAACCCCGTGGTTATGCCTTCATCGAGTATGAGCATGAACGAGACATGCACTCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209993.2 |
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| CDS CCA 72 bp | AGGAGCATCTCGAGGGTCCTCAAACTCTCGGATGTATaGTGCAATGCCACAGTAAGGTTGGTTATGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RSISRVLKLSDV*CNATVRLVMVF Trigger: AAACACCATAACCAACCTTACTGTGGCATTGCACCATACATCCGAGAGTTTGAGGACCCTCGAGATGCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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| CDS GCA 72 bp | CTCGAGGGTCCTCAAACTCTCGGATGTATGGTGCAATaGCACAGTAAGGTTGGTTATGGTGTTTTTCATGTG | + |
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Preference number: 6 (lower is better) Translates to: LEGPQTLGCMVQ*HSKVGYGVFHV Trigger: CACATGAAAAACACCATAACCAACCTTACTGTGGCATTGCACCATACATCCGAGAGTTTGAGGACCCTCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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| CDS GCA 72 bp | AGCATCTCGAGGGTCCTCAAACTCTCGGATGTATGGTaGAATGCCACAGTAAGGTTGGTTATGGTGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SISRVLKLSDVW*NATVRLVMVFF Trigger: GAAAAACACCATAACCAACCTTACTGTGGCATTGCACCATACATCCGAGAGTTTGAGGACCCTCGAGATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074575.11 ENSMUST00000209858.2 ENSMUST00000211121.2 ENSMUST00000211378.2 |
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