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Pregenerated sensors for SNRNP200 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000003660

Ensembl transcript IDs: ENSMUST00000103220.4

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp CTTGACATGACACTTGAAAATACAAGACCCAGACCTTaGACTAAGGTCCAAAGTGGGACAGTAACTGGATGT +
Preference number: 3 (lower is better)
Translates to: LDMTLENTRPRP*TKVQSGTVTGC
Trigger: ACATCCAGTTACTGTCCCACTTTGGACCTTAGTTCAAGGTCTGGGTCTTGTATTTTCAAGTGTCATGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
3UTR TCA 72 bp CCATGCCTCCAAATATTGTACAGTTCATGCTTGACATaGCACTTGAAAATACAAGACCCAGACCTTGAACTA +
Preference number: 3 (lower is better)
Translates to: PCLQILYSSCLT*HLKIQDPDLEL
Trigger: TAGTTCAAGGTCTGGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACTGCAGCCCAGCCAGTaGGCCACATCCTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSLQPSQ*ATSLAL
Trigger: CAATGCCAAGGATGTGGCTCACTGGCTGGGCTGCAG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACGACTGAGCTGTCGCTaGAGCCAGAAGGCATCGATA +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSRLSCR*SQKASI
Trigger: TATCGATGCCTTCTGGCTGCAGCGACAGCTCAGTCG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACTGCAGGATATCCAGTaGTCCCAGCTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSLQDIQ*SQLCPT
Trigger: CGTTGGACAGAGCTGGGAGCACTGGATATCCTGCAG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGCATGTCAGGCAGCTTaGAGACCATCTGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSACQAA*RPSGSR
Trigger: TCGAGAGCCAGATGGTCTCCAAGCTGCCTGACATGC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAACAGAAAGGTCCAGGTaGGGTAGTCCACAGCATCCT +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSTERSR*GSPQHP
Trigger: AGGATGCTGTGGACTACCTCACCTGGACCTTTCTGT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATTGTGGGGGACCTTCTaGGCCAACTGGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASLWGTF*ANWRRR
Trigger: CCTCCTGCGCCAGTTGGCTCAGAAGGTCCCCCACAA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATCCAAATCCAGAACCTaGCTTGGAGCCAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSSKSRT*LGARAS
Trigger: AGAGGCTCTGGCTCCAAGGCAGGTTCTGGATTTGGA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACGCTGGGTTCCTCAATaGTCTCCTTTACAGGGATGG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSRWVPQ*SPLQGW
Trigger: CCATCCCTGTAAAGGAGAGCATTGAGGAACCCAGCG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGCAGTGAGGCGGGTCTaGTTACGAGATGGGACAAAA +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSAVRRV*LRDGTK
Trigger: TTTTGTCCCATCTCGTAAGCAGACCCGCCTCACTGC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACCGGAGCTGAAGAGCTaGTCTACCAGGCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASPELKS*STRRLS
Trigger: GGAGAGGCGCCTGGTAGAGCAGCTCTTCAGCTCCGG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGTCCGCCACTGCGGATaGTGTCTTTATCCACCACTT +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSVRHCG*CLYPPL
Trigger: AAGTGGTGGATAAAGACAGCATCCGCAGTGGCGGAC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAAGAGCCTCTCCACCCTaGTCCAAATCCATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSRASPP*SKSMVS
Trigger: GGAAACCATGGATTTGGACCAGGGTGGAGAGGCTCT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACCCTCAAATCCTGCCTaGGCATACTTTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSPSNPA*AYFGSF
Trigger: GAAGCTGCCAAAGTATGCCCAGGCAGGATTTGAGGG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAATGAGGTGCTCATCCTaGGCATACTTGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSMRCSS*AYLAFS
Trigger: GCTGAAGGCCAAGTATGCCCAGGATGAGCACCTCAT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATCGCCCCCAATAAGGTaGACCTCATCCACCACAAAG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSSPPIR*TSSTTK
Trigger: CTTTGTGGTGGATGAGGTCCACCTTATTGGGGGCGA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGTGTCCATTCGGGACTaGCGGACTCTCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRVSIRD*RTLSLR
Trigger: CCGGAGAGAGAGAGTCCGTCAGTCCCGAATGGACAC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAACTGCTCCAGGTCACTaGGGGTCTGCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRTAPGH*GSAPPA
Trigger: AGCTGGTGGAGCAGACCCTCAGTGACCTGGAGCAGT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATTGAAGCCCTGGATGTaGAGTTCCAAAGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSLKPWM*SSKGTG
Trigger: CCCTGTACCTTTGGAACTGCACATCCAGGGCTTCAA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATCCTTCTCGGTGCAGTaGAGGAACCTCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSFSVQ*RNLCRW
Trigger: CCAGCGGCAGAGGTTCCTGCACTGCACCGAGAAGGA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACCTGCATCTGTGGTTTaGTCCGTTGAGCCTTATCTC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSPASVV*SVEPYL
Trigger: GAGATAAGGCTCAACGGACCAAACCACAGATGCAGG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACGACTCGCAGAAAGGTaGCCACATCTTCATAGTTGG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSRLAER*PHLHSW
Trigger: CCAACTATGAAGATGTGGCCACCTTTCTGCGAGTCG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGCACTACCTTCTTGTTaGGCCTGTCCTGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSALPSC*ACPETS
Trigger: AGAAGTTTCAGGACAGGCTCAACAAGAAGGTAGTGC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAATGGGACAAAAACGATaGCAGGCTTCTTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSMGQKR*QASWVS
Trigger: ACTCACCCAAGAAGCCTGTCATCGTTTTTGTCCCAT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGTTCACTGCATCCTTTaGATTCTGGACATTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSVHCIL*ILDIAQ
Trigger: CTGGGCAATGTCCAGAATGCAAAGGATGCAGTGAAC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAACATGGACTGCCACATaGGCTTGTCAATCATCTTGC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSTWTAT*ACQSSC
Trigger: GCAAGATGATTGACAAGCGCATGTGGCAGTCCATGT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGTAATAGGCTGCAGGTaGACTGACAACTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSVIGCR*TDNSNL
Trigger: CAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATTAC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATCAGGTCCTTCTCGGTaGAGTGCAGGAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSGPSR*SAGTSA
Trigger: GGCAGAGGTTCCTGCACTGCACCGAGAAGGACCTGA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAGGTCACTGAGGGTCTaGTCCACCAGCTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRRSLRV*STSSDR
Trigger: CCTGTCAGAGCTGGTGGAGCAGACCCTCAGTGACCT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATGCCTGGGCATACTTTaGCAGCTTCTCCACCGGGAG +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASCLGIL*QLLHRE
Trigger: CTCCCGGTGGAGAAGCTGCCAAAGTATGCCCAGGCA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGGATGCCTTCACCCTTaGTGTCATACTGCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASGCLHP*CHTAAV
Trigger: GACGGCCGCAGTATGACACCAAGGGTGAAGGCATCC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATCCTTGCATAGCTGGTaGTCCCCAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSLHSW*SPVSSA
Trigger: TGCTGAGCTGACTGGGGATCACCAGCTATGCAAGGA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGGATGTCTATTGCAGTaGGGCGGGTCTGCTTACGAG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRGCLLQ*GGSAYE
Trigger: CTCGTAAGCAGACCCGCCTCACTGCAATAGACATCC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAATGATGATCACTAGATaGGCAGCAACATTCATGCCC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSMMITR*AATFMP
Trigger: GGGCATGAATGTTGCTGCTCATCTAGTGATCATCAT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACAGGACTTCATCAGCTaGTCCACAAAGAATATCTCG +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSQDFIS*STKNIS
Trigger: CGAGATATTCTTTGTGGAGCAGCTGATGAAGTCCTG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACCGCTGGATGTCTGCTaGACAGGTAGTGAGGATGTC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASPLDVC*TGSEDV
Trigger: GACATCCTCACTACCTGTGCAGCAGACATCCAGCGG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACTGCCGCTGGATGTCTaGTGCACAGGTAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASLPLDV*CTGSED
Trigger: ATCCTCACTACCTGTGCAGCAGACATCCAGCGGCAG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAGTAGGCAGCAATCATaGCCAGGTTCAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSRQQS*PGSEGP
Trigger: TGGCCCCTCTGAACCTGGGCATGATTGCTGCCTACT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACCAACGCCCCTTCTCTaGACTGTACACTTGGGTACC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASPTPLL*TVHLGT
Trigger: GGTACCCAAGTGTACAGTCCAGAGAAGGGGCGTTGG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAAGATGGACATACTTGTaGATGGTCTTCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSRWTYL*MVFPIF
Trigger: GAAGATGGGGAAGACCATCCACAAGTATGTCCATCT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAAAGAGGTTAATGTTCTaGACGTTCTTGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSKRLMF*TFLRCF
Trigger: GAAGCAGCGCAAGAACGTCCAGAACATTAACCTCTT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAATCTCAGCATTGAAGTaGTCATGCATACAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSISALK*SCIQWS
Trigger: GGACCACTGTATGCATGACCACTTCAATGCTGAGAT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGCAGGTTGTAGTAATTaGGGTTCTGTGTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSAGCSN*GSVSFC
Trigger: GCAGAATGACACAGAACCCCAATTACTACAACCTGC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACGCCACCGTAGTCTGTaGTCTTCTTGCCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASRHRSL*SSCPGL
Trigger: TAAACCTGGGCAAGAAGATCACAGACTACGGTGGCG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGCCCGTCTTTCTTCCTaGATCTGTGGTTTGGTCCGT +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRARLSS*ICGLVR
Trigger: ACGGACCAAACCACAGATGCAGGAAGAAAGACGGGC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATTGCATTCTGGACATTaGCCAGAACAATTTCCGCAT +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSLHSGH*PEQFPH
Trigger: ATGCGGAAATTGTTCTGGGCAATGTCCAGAATGCAA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAAAGGAGACAGGTAGCTaGGTCTCACAAGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASKETGS*VSQESQ
Trigger: CTGGCTCTCTTGTGAGACGCAGCTACCTGTCTCCTT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATCTGGTAGGATCAGATaGCGGAAGGAGACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSGRIR*RKETGS
Trigger: GCTACCTGTCTCCTTCCGGCATCTGATCCTACCAGA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGACACAGGCAATGGCTaGAGGTCCAACAGTTCGGTT +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRDTGNG*RSNSSV
Trigger: AACCGAACTGTTGGACCTGCAGCCATTGCCTGTGTC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACATGTATACCTGCTCTaGCAGAGCCTCCATAGGGGT +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASHVYLL*QSLHRG
Trigger: ACCCCTATGGAGGCTCTGGCAGAGCAGGTATACATG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATACGAAGGACTTCAGTaGAGGCAGAACCCTCGCGAA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASYEGLQ*RQNPRE
Trigger: TTCGCGAGGGTTCTGCCTCCACTGAAGTCCTTCGTA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATACTGGAGCTCCCCATaGGATGTGATGAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASYWSSP*DVMRMP
Trigger: AGGCATCCTCATCACATCCCATGGGGAGCTCCAGTA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGAGCAATTGTTCTTCTaGGCCAAAGGGCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLREQLFF*AKGLGL
Trigger: AAGCCCAAGCCCTTTGGCTCAGAAGAACAATTGCTC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGCACAGTATCATTGGTaGTATAGTAGTGACTTGCTA +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSAQYHW*YSSDLL
Trigger: TAGCAAGTCACTACTATATCACCAATGATACTGTGC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGACAGGCTTCTTGGGTaGGTGTTTGGTGATAGCATG +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASDRLLG*VFGDSM
Trigger: CATGCTATCACCAAACACTCACCCAAGAAGCCTGTC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATCCTTTTTAGAGCCCTaGCACATGATGACACAGCGC +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSFLEP*HMMTQR
Trigger: GCGCTGTGTCATCATGTGTCAGGGCTCTAAAAAGGA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAAGAAAATATTCATGGTaGAGAATCACCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSRKYSW*RITSLS
Trigger: GGACAGTGAGGTGATTCTGCACCATGAATATTTTCT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACAGTCCATGTATACCTaGTCTGCCAGAGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASQSMYT*SARASI
Trigger: TATGGAGGCTCTGGCAGAGCAGGTATACATGGACTG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAAGTGAGGATGTCTATTaGAGTGAGGCGGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSEDVY*SEAGLL
Trigger: AAGCAGACCCGCCTCACTGCAATAGACATCCTCACT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATCTGGACTGTACACTTaGGTACCTTTAATGATGACT +
Preference number: 4 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSSGLYT*VPLMMT
Trigger: AGTCATCATTAAAGGTACCCAAGTGTACAGTCCAGA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAAGTCTAGCTTCACCTTaGCTTTCTGCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSLASP*LSAAGS
Trigger: TGACCCTGCAGCAGAAAGCCAAGGTGAAGCTAGACT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATTTTCAGGTTCACTCTaGGCACTGGCCAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRFSGSL*ALANKV
Trigger: TACCTTGTTGGCCAGTGCTCAGAGTGAACCTGAAAA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGATGTTCTTGAACTCTaGGGACAAGGAGAACACTCG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRDVLEL*GQGEHS
Trigger: CGAGTGTTCTCCTTGTCCTCAGAGTTCAAGAACATC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATTCGAGTTTCAGCTGTaGGATGAAGGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRFEFQL*DEGLEK
Trigger: CTTCTCCAAGCCTTCATCTCACAGCTGAAACTCGAA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATCTCGTCCTCAATACTaGTGCATTTGGACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSRPQY*CIWTAP
Trigger: TGGAGCAGTCCAAATGCATCAGTATTGAGGACGAGA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATCCAAGTTCTTGCACTaGTCTGCTTCTGTACGAAGG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSKFLH*SASVRR
Trigger: CCTTCGTACAGAAGCAGAGCAGTGCAAGAACTTGGA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCCCCTTGGTGTCATACTaGGGCCGTCCAGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPPLVSY*GRPARP
Trigger: GGGCCGTGCTGGACGGCCGCAGTATGACACCAAGGG...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAGAGAGCGGTCAGCTTaGAGCACAAGATTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRRERSA*STRFEF
Trigger: GAACTCAAATCTTGTGCTCCAAGCTGACCGCTCTCT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACCTGGTCCAAATCCATaGTTTCCAGATCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASPGPNP*FPDLCP
Trigger: TGGACACAGATCTGGAAACCATGGATTTGGACCAGG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGACCAAGTTCTGTCACCTaGAAGTTGCCTGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRPSSVT*KLPVFL
Trigger: CAAGAAGACAGGCAACTTCCAGGTGACAGAACTTGG...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGGTCTGCTTACGAGATaGGACAAAAACGATGACAGG +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRGLLTR*DKNDDR
Trigger: CCTGTCATCGTTTTTGTCCCATCTCGTAAGCAGACC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGGCGGGTCCGGTCAATaGGAGAGCGGTCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPGGSGQ*ESGQLG
Trigger: TCCAAGCTGACCGCTCTCTCATTGACCGGACCCGCC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCAGCTGGGTGTAGGTaGGCTCCCCGCCCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRPAGCR*APRPCV
Trigger: CACGCAAGGGCGGGGAGCGCACCTACACCCAGCTGG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGGTGGAGGTGGCACTaGAGCCCAGCCAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPRWRWH*SPASEP
Trigger: TGGCTCACTGGCTGGGCTGCAGTGCCACCTCCACCT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAAGGAGCAAAACCAGTTaGTTCTCACATTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASRSKTS*FSHSRS
Trigger: TGACCGAGAATGTGAGAACCAACTGGTTTTGCTCCT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAAGTCGGACATCTTCTTaGGTCATCTCAATGTTTCGG +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSRTSS*VISMFR
Trigger: CCGAAACATTGAGATGACCCAAGAAGATGTCCGACT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAATCCCACTGGAAATCTaGTGTGATAGTCAGCTCTAC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASIPLEI*CDSQLY
Trigger: GTAGAGCTGACTATCACACCAGATTTCCAGTGGGAT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATGTTTGGTGATAGCATaGTACACAGGCTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASCLVIA*YTGLAI
Trigger: TATGGCCAAGCCTGTGTACCATGCTATCACCAAACA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATCTTCTTGTCGTACTTaGCCAGATTGTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSSCRT*PDCSCP
Trigger: TGGACAAGAACAATCTGGTCAAGTACGACAAGAAGA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAATCTTGTTCATGTCATaGCGGTCCTCATCACGTTTT +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASILFMS*RSSSRF
Trigger: AAAACGTGATGAGGACCGGCATGACATGAACAAGAT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATCGATATCCCGAGGGTaGAAATCCTTCTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSISRG*KSFFLE
Trigger: TTCTAAGAAGAAGGATTTGCACCCTCGGGATATCGA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAACTCTAGTCATGCCTaGATGATGAATAGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRNSSHA*MMNSKA
Trigger: GGCTTTGCTATTCATCATGCAGGCATGACTAGAGTT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCACATCAGGGCCACGTTaGTCTTGCCCGCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPTSGPR*SCPHQW
Trigger: CCACTGGTGCGGGCAAGACCAACGTGGCCCTGATGT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAACTTGGGGAAAAGATaGACATACTTGTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRNLGKR*TYLWMV
Trigger: GACCATCCACAAGTATGTCCATCTTTTCCCCAAGTT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAACCTTTTCATCCCACTaGAAATCTGGTGTGATAGTC +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASTFSSH*KSGVIV
Trigger: GACTATCACACCAGATTTCCAGTGGGATGAAAAGGT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACATCCTGGGCATACTTaGCCTTCAGCAGAAAATATT +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASHPGHT*PSAENI
Trigger: AATATTTTCTGCTGAAGGCCAAGTATGCCCAGGATG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGAAGCACATCATAGATaGGGTAATCCACATAGGCAT +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLREAHHR*GNPHRH
Trigger: ATGCCTATGTGGATTACCCCATCTATGATGTGCTTC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACAGGTGAGACTCTACTaGCAATGGCTCATACAAAAA +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASQVRLY*QWLIQK
Trigger: TTTTTGTATGAGCCATTGCCAGTAGAGTCTCACCTG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAATGATGACTGTATGTaGAGGAAGATTTACACCCCA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRNDDCM*RKIYTP
Trigger: TGGGGTGTAAATCTTCCTGCACATACAGTCATCATT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGCTTGTCAATCATCTTaGAGAGATTCAGGGTCTTAT +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRACQSS*RDSGSY
Trigger: ATAAGACCCTGAATCTCTGCAAGATGATTGACAAGC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGGAGCTTCAGATCTGTaGTGGTCTCCCCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPGASDL*WSPPSA
Trigger: TGCTGACGGGGGAGACCAGCACAGATCTGAAGCTCC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATTATTGGCCATGAAGTaGCTTCCTTGGGTAAAAACA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRLLAMK*LPWVKT
Trigger: TGTTTTTACCCAAGGAAGCCACTTCATGGCCAATAA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGACCCGTCAGGAAGCTaGCAGCGCTTATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPDPSGS*QRLLAM
Trigger: CATGGCCAATAAGCGCTGCCAGCTTCCTGACGGGTC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACTGCCCACCATCTCCTaGACCAGGGACCGCATGGGA +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLPTIS*TRDRMG
Trigger: TCCCATGCGGTCCCTGGTCCAGGAGATGGTGGGCAG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCTGCAGGGGCCGGTTaGCATGGCCCACCATCTGAA +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRPAGAG*HGPPSE
Trigger: TTCAGATGGTGGGCCATGCCAACCGGCCCCTGCAGG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCTCAGCTCAGCAACAGTaGTGCCATATGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPSAQQQ*CHMWPG
Trigger: GCCTGGCCACATATGGCATCACTGTTGCTGAGCTGA...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGTGGAAACTAAAACCTaGATATGCTTGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRVETKT*ICLSAK
Trigger: TTTTGCTGACAAGCATATTCAGGTTTTAGTTTCCAC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGGCTGCAGGTGCACTaGCAACTCCAACTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPRLQVH*QLQLGE
Trigger: TTCCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGGCGAGTCTGTGTGTaGCTGATGTTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPRRVCV*LMLKPW
Trigger: CCAGGGCTTCAACATCAGTCACACACAGACTCGCCT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCCTCTCCAGCAACTTCTaGAGCTCCAGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPLSSNF*SSSFSS
Trigger: GGAGGAGAAGCTGGAGCTGCAGAAGTTGCTGGAGAG...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGAGCAGCAACATTCATaGCCCAGCAGAGACTCCGAG +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPEQQHS*PSRDSE
Trigger: CTCGGAGTCTCTGCTGGGGCATGAATGTTGCTGCTC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCCTGTGGGAAGAGAGGTaGAATAACTGGGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPLWEER*NNWARD
Trigger: GTCACGGGCCCAGTTATTGCACCTCTCTTCCCACAG...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGATCTTGCCCGCACCAGTaGGAGCACACAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRSCPHQ*EHTAAG
Trigger: ACCTGCTGCTGTGTGCTCCCACTGGTGCGGGCAAGA...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATCATCATGTAGAAGATaGATCTCATCCAAGACAATG +
Preference number: 4 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSSCRR*ISSKTM
Trigger: CATTGTCTTGGATGAGATCCATCTTCTACATGATGA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGGAACCTCTGCCGCTaGATGTCTGCTGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPRNLCR*MSAAQV
Trigger: TACCTGTGCAGCAGACATCCAGCGGCAGAGGTTCCT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCCATCATAGAAACGACTaGGCTGTCGCTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPHHRND*AVAAAR
Trigger: TCTGGCTGCAGCGACAGCTCAGTCGTTTCTATGATG...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGGGACCTTTCTTCTCTaGTCAGGTCCTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPGTFLL*SGPPSQ
Trigger: CTGAGAAGGAGGACCTGATCAGAGAAGAAAGGTCCC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACTCTCGATAGGCAGCTaGTGGTTGAGGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLSIGS*WLRRER
Trigger: CCTCTCCCTCCTCAACCAGCAGCTGCCTATCGAGAG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGCAGACACAGGCAATaGCTGCAGGTCCAACAGTTC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPSRHRQ*LQVQQF
Trigger: GAACTGTTGGACCTGCAGCCATTGCCTGTGTCTGCT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGTGCCACAATGCGAATaGGCCGCTCAATCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRVPQCE*AAQSGR
Trigger: CCTCCCAGATTGAGCGGCCCATTCGCATTGTGGCAC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGTGAGCCACATCCTTaGCATTGGAGAGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPSEPHP*HWRVRS
Trigger: GCTCCTCACTCTCCAATGCCAAGGATGTGGCTCACT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGGGCGCACATTAGGATaGAAGTTGAAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPGRTLG*KLKVEV
Trigger: CACCTCCACCTTCAACTTCCATCCTAATGTGCGCCC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCACATCCACACAGGCCTaGATTAGCCGGATTGCCTTA +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPTSTQA*ISRIAL
Trigger: TAAGGCAATCCGGCTAATTCAGGCCTGTGTGGATGT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGACAATTTCGAAGATTaGACGCATCAACCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPDNFED*THQPAS
Trigger: GCTGGCCGGTTGATGCGTGCAATCTTCGAAATTGTC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGGCGAAGAGGACACATaGACTGCCACATGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRGEEDT*TATCAC
Trigger: ACAAGCGCATGTGGCAGTCCATGTGTCCTCTTCGCC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGATGTGGTTTGGTCCGTTaGGCCTTATCTCCCATTCGG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRCGLVR*ALSPIR
Trigger: CCGAATGGGAGATAAGGCTCAACGGACCAAACCACA...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACTGGTATCATCTGTCTaGCCCAGCAGCAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLVSSV*PSSRSI
Trigger: GATTGACCTGCTGCTGGGTCAGACAGATGATACCAG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCTTGTTGAGCCTGTCCTaGAACTTCTCATACCAGTCC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPLLSLS*NFSYQS
Trigger: GGACTGGTATGAGAAGTTTCAGGACAGGCTCAACAA...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAATACAGTGGTCCAGGTaGGACTCTACTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRIQWSR*DSTGNG
Trigger: GCCATTGCCAGTAGAGTCTCACCTGGACCACTGTAT...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCCATTCAGAGACATGCTaGAGAGCTCAATGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPHSETC*RAQWWC
Trigger: ACACCACCATTGAGCTCTTCAGCATGTCTCTGAATG...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCTGGCTGTCAGTCAACTaGAGCAATGCATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPWLSVN*SNAFRS
Trigger: AGAACGGAATGCATTGCTTCAGTTGACTGACAGCCA...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGAAGCCCTCAAATCCTaGCTGGGCATACTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTREALKS*LGILWQ
Trigger: CTGCCAAAGTATGCCCAGGCAGGATTTGAGGGCTTC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGTTCTTGCACTGCTCTaGTTCTGTACGAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPVLALL*FCTKDF
Trigger: GAAGTCCTTCGTACAGAAGCAGAGCAGTGCAAGAAC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGCCCAGCCAGTTCACTaGATCCTTTGCATTCTGGAC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRAQPVH*ILCILD
Trigger: GTCCAGAATGCAAAGGATGCAGTGAACTGGCTGGGC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGAGCGTGTAATAGGCTaGAGGTGCACTGACAACTCC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRERVIG*RCTDNS
Trigger: GGAGTTGTCAGTGCACCTGCAGCCTATTACACGCTC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACTGATGCATTTGGACTaGTCCAGGTCACTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLMHLD*SRSLRV
Trigger: GACCCTCAGTGACCTGGAGCAGTCCAAATGCATCAG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCTTCTTCCTGCATCTGTaGTTTGGTCCGTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPFFLHL*FGPLSL
Trigger: AAGGCTCAACGGACCAAACCACAGATGCAGGAAGAA...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGTCCAACAGTTCGGTTaGAGGTGGGTACTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRVQQFG*RWVLLW
Trigger: CCAGAGAAGTACCCACCTCCAACCGAACTGTTGGAC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGCAAGGGATCTCCCTTaGGGTCATCATGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRARDLP*GHHEKC
Trigger: GCATTTCTCATGATGACCTCAAGGGAGATCCCTTGC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACTTGGCATTGGAGAGTaGGGAGCTAAGTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLGIGE*GAKCHN
Trigger: ATTGTGGCACTTAGCTCCTCACTCTCCAATGCCAAG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACTTATCTGTAAGCTGTaGCCAACCTCGGTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLICKL*PTSVQD
Trigger: GTCCTGAACCGAGGTTGGGCACAGCTTACAGATAAG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGGAAGTTTTCGGAACTaGCGAAGAGGACACATGGAC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRGSFRN*RRGHMD
Trigger: GTCCATGTGTCCTCTTCGCCAGTTCCGAAAACTTCC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGGACATACTTGTGGATaGTCTTCCCCATCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRGHTCG*SSPSSA
Trigger: TGCCGAAGATGGGGAAGACCATCCACAAGTATGTCC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCTGTATGCGTCACTCATaGAGTACAGGGTATAGTTGT +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPCMRHS*STGYSC
Trigger: ACAACTATACCCTGTACTTCATGAGTGACGCATACA...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACTGTCACCTGGAAGTTaGCTGTCTTCTTGTCGTACT +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLSPGS*LSSCRT
Trigger: AGTACGACAAGAAGACAGGCAACTTCCAGGTGACAG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGGTTCTGTGTCATTCTaGGATACAGAAAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRGSVSF*DTERSR
Trigger: CCTGGACCTTTCTGTATCGCAGAATGACACAGAACC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCAGCACATGGTATCTaGTATCATCTGTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRPAHGI*YHLSDP
Trigger: TGGGTCAGACAGATGATACCAGATACCATGTGCTGG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGGTTTACCAGCACATaGTATCTGGTATCATCTGTC +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPRFTST*YLVSSV
Trigger: GACAGATGATACCAGATACCATGTGCTGGTAAACCT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAGAACTTGGAGAGCTCTaGATCAGCTTCCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRELGEL*ISFHLS
Trigger: GGAAAGATGGAAGCTGATCCAGAGCTCTCCAAGTTC...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCACGCCAGAGTTGCGGTaGAAACTAAAACCTGAATAT +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPTPELR*KLKPEY
Trigger: ATATTCAGGTTTTAGTTTCCACCGCAACTCTGGCGT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGCATCCTTTGCATTCTaGACATTGCCCAGAACAATT +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPASFAF*TLPRTI
Trigger: AATTGTTCTGGGCAATGTCCAGAATGCAAAGGATGC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCACGGTATTAAATACTTaGGTCTGGATGGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPTVLNT*VWMGLK
Trigger: CTTCAATCCCATCCAGACTCAAGTATTTAATACCGT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR TCA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCTGTCTTCATGATGCCTaGTTGGAATGTTCTCATACT +
Preference number: 4 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPCLHDA*LECSHT
Trigger: AGTATGAGAACATTCCAATCAGGCATCATGAAGACA...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAATCATCATCCTGTGCTaGCGCAACACTTTAATGAAG +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRIIILC*RNTLMK
Trigger: CTTCATTAAAGTGTTGCGGCAGCACAGGATGATGAT...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR GCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACATAGGCATGGATCTTaGCATTGTAGTACTGAGTAT +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRHRHGS*HCSTEY
Trigger: ATACTCAGTACTACAATGGCAAGATCCATGCCTATG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGATCTTCTGTGACACAATaGCATCATCATAGAAACGAC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRSSVTQ*HHHRND
Trigger: GTCGTTTCTATGATGATGCCATTGTGTCACAGAAGA...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CCA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGATTCATGATGCCTGATTaGAATGTTCTCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRFMMPD*NVLILC
Trigger: GCAGAGTATGAGAACATTCCAATCAGGCATCATGAA...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAGTGCGCTCCCCGCCCTaGCGTGTGATGATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSVRSPP*RVMMSH
Trigger: GTGGGACATCATCACACGCAAGGGCGGGGAGCGCAC...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp GGGACAGAACCTCTCCCGTCGGTTCATCCCGGCGGGTCCGGTCAATaGGAGAGCGGTCAGCTTGGAGCACAAGATTTGAGTTCGCCTTGT +
Preference number: 5 (lower is better)
Translates to: GTEPLPSVHPGGSGQ*ESGQLGAQDLSSPC
Trigger: ACAAGGCGAACTCAAATCTTGTGCTCCAAGCTGACCGCTCTCTCATTGACCGGACCCGCCGGGATGAACCGACGGGAGAGGTTCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp GGCACTGCAGCCCAGCCAGTGAGCCACATCCTTGGCATTGGAGAGTaGGGAGCTAAGTGCCACAATGCGAATGGGCCGCTCAATCTGGGA +
Preference number: 5 (lower is better)
Translates to: GTAAQPVSHILGIGE*GAKCHNANGPLNLG
Trigger: TCCCAGATTGAGCGGCCCATTCGCATTGTGGCACTTAGCTCCTCACTCTCCAATGCCAAGGATGTGGCTCACTGGCTGGGCTGCAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp TCCCCATGGGATGTGATGAGGATGCCTTCACCCTTGGTGTCATACTaGGGCCGTCCAGCACGGCCCAGCATCTGCAGGATATCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SPWDVMRMPSPLVSY*GRPARPSICRISSA
Trigger: AGCACTGGATATCCTGCAGATGCTGGGCCGTGCTGGACGGCCGCAGTATGACACCAAGGGTGAAGGCATCCTCATCACATCCCATGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAAATCCAGAACCTGCCTaGGAGCCAGAGCCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSNPEPA*EPEPLH
Trigger: GTGGAGAGGCTCTGGCTCCAAGGCAGGTTCTGGATT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAAGGATGCCTTCACCCTaGGTGTCATACTGCGGCCGT +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSRMPSP*VSYCGR
Trigger: ACGGCCGCAGTATGACACCAAGGGTGAAGGCATCCT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp GCATTTGGACTGCTCCAGGTCACTGAGGGTCTGCTCCACCAGCTCTaGCAGGTGGTCAGACAGATGACGATGGGATATCCCCTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: AFGLLQVTEGLLHQL*QVVRQMTMGYPLQV
Trigger: AACCTGCAGGGGATATCCCATCGTCATCTGTCTGACCACCTGTCAGAGCTGGTGGAGCAGACCCTCAGTGACCTGGAGCAGTCCAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp AGAGGGGCCACATCCATCTCGTCCTCAATACTGATGCATTTGGACTaGTCCAGGTCACTGAGGGTCTGCTCCACCAGCTCTGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: RGATSISSSILMHLD*SRSLRVCSTSSDRW
Trigger: CCACCTGTCAGAGCTGGTGGAGCAGACCCTCAGTGACCTGGAGCAGTCCAAATGCATCAGTATTGAGGACGAGATGGATGTGGCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp GAACCTGCCTTGGAGCCAGAGCCTCTCCACCCTGGTCCAAATCCATaGTTTCCAGATCTGTGTCCATTCGGGACTGACGGACTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: EPALEPEPLHPGPNP*FPDLCPFGTDGLSL
Trigger: GAGAGAGAGTCCGTCAGTCCCGAATGGACACAGATCTGGAAACCATGGATTTGGACCAGGGTGGAGAGGCTCTGGCTCCAAGGCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp CTCCTCTTGGCCCGTCTTTCTTCCTGCATCTGTGGTTTGGTCCGTTaGGCCTTATCTCCCATTCGGGTTCCCTCCAACTTCCCAACCAGG +
Preference number: 5 (lower is better)
Translates to: LLLARLSSCICGLVR*ALSPIRVPSNFPTR
Trigger: CCTGGTTGGGAAGTTGGAGGGAACCCGAATGGGAGATAAGGCTCAACGGACCAAACCACAGATGCAGGAAGAAAGACGGGCCAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp TTAGGATGGAAGTTGAAGGTGGAGGTGGCACTGCAGCCCAGCCAGTaGGCCACATCCTTGGCATTGGAGAGTGAGGAGCTAAGTGCCACA +
Preference number: 5 (lower is better)
Translates to: LGWKLKVEVALQPSQ*ATSLALESEELSAT
Trigger: TGTGGCACTTAGCTCCTCACTCTCCAATGCCAAGGATGTGGCTCACTGGCTGGGCTGCAGTGCCACCTCCACCTTCAACTTCCATCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp TCCAACAGTTCGGTTGGAGGTGGGTACTTCTCTGGTAGGATCAGATaGCGGAAGGAGACAGGTAGCTGCGTCTCACAAGAGAGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: SNSSVGGGYFSGRIR*RKETGSCVSQESQR
Trigger: TCGCTGGCTCTCTTGTGAGACGCAGCTACCTGTCTCCTTCCGGCATCTGATCCTACCAGAGAAGTACCCACCTCCAACCGAACTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp GTCGGTTCATCCCGGCGGGTCCGGTCAATGAGAGAGCGGTCAGCTTaGAGCACAAGATTTGAGTTCGCCTTGTACTCGTACTGCAAACTG +
Preference number: 5 (lower is better)
Translates to: VGSSRRVRSMRERSA*STRFEFALYSYCKL
Trigger: CAGTTTGCAGTACGAGTACAAGGCGAACTCAAATCTTGTGCTCCAAGCTGACCGCTCTCTCATTGACCGGACCCGCCGGGATGAACCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCACTGCCTGGGCATACTTaGGCAGCTTCTCCACCGGGA +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASLPGHT*AASPPG
Trigger: TCCCGGTGGAGAAGCTGCCAAAGTATGCCCAGGCAG...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp CCCTGGTCCAAATCCATGGTTTCCAGATCTGTGTCCATTCGGGACTaGCGGACTCTCTCTCTCCGGGACCTTTCTTCTCTGATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PWSKSMVSRSVSIRD*RTLSLRDLSSLIRS
Trigger: GGACCTGATCAGAGAAGAAAGGTCCCGGAGAGAGAGAGTCCGTCAGTCCCGAATGGACACAGATCTGGAAACCATGGATTTGGACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp CCTCTGCCGCTGGATGTCTGCTGCACAGGTAGTGAGGATGTCTATTaGAGTGAGGCGGGTCTGCTTACGAGATGGGACAAAAACGATGAC +
Preference number: 5 (lower is better)
Translates to: PLPLDVCCTGSEDVY*SEAGLLTRWDKNDD
Trigger: GTCATCGTTTTTGTCCCATCTCGTAAGCAGACCCGCCTCACTGCAATAGACATCCTCACTACCTGTGCAGCAGACATCCAGCGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp CCGTCAGGAAGCTGGCAGCGCTTATTGGCCATGAAGTGGCTTCCTTaGGTAAAAACAAGGTCCTCCAAATCCAGAACCTGCCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PSGSWQRLLAMKWLP*VKTRSSKSRTCLGA
Trigger: GGCTCCAAGGCAGGTTCTGGATTTGGAGGACCTTGTTTTTACCCAAGGAAGCCACTTCATGGCCAATAAGCGCTGCCAGCTTCCTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp CGGAAGGACCCGTCAGGAAGCTGGCAGCGCTTATTGGCCATGAAGTaGCTTCCTTGGGTAAAAACAAGGTCCTCCAAATCCAGAACCTGC +
Preference number: 5 (lower is better)
Translates to: RKDPSGSWQRLLAMK*LPWVKTRSSKSRTC
Trigger: GCAGGTTCTGGATTTGGAGGACCTTGTTTTTACCCAAGGAAGCCACTTCATGGCCAATAAGCGCTGCCAGCTTCCTGACGGGTCCTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp CCCCCAATAAGGTGGACCTCATCCACCACAAAGAGGTTAATGTTCTaGACGTTCTTGCGCTGCTTCCACCTCCGAGAGAGGATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: PPIRWTSSTTKRLMF*TFLRCFHLRERMSH
Trigger: GTGGGACATCCTCTCTCGGAGGTGGAAGCAGCGCAAGAACGTCCAGAACATTAACCTCTTTGTGGTGGATGAGGTCCACCTTATTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACATGAAGTGGCTTCCTaGGGTAAAAACAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSHEVAS*GKNKVL
Trigger: GAGGACCTTGTTTTTACCCAAGGAAGCCACTTCATG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGATGCCCACATATGTTaGTTCCAGAGGCACGGGGCG +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRDAHIC*FQRHGA
Trigger: CGCCCCGTGCCTCTGGAACAAACATATGTGGGCATC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAAGCATGTCAGGCAGCTaGGAGACCATCTGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSMSGS*ETIWLS
Trigger: CGAGAGCCAGATGGTCTCCAAGCTGCCTGACATGCT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGCATGGTACACAGGCTaGGCCATAGAGAGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASAWYTG*AIESRR
Trigger: TCGCCTGCTCTCTATGGCCAAGCCTGTGTACCATGC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCAACGATGACAGGCTTCTaGGGTGAGTGTTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSTMTGF*GECLVI
Trigger: TATCACCAAACACTCACCCAAGAAGCCTGTCATCGT...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp TCGTACTTGACCAGATTGTTCTTGTCCAGCATCAAGGCAGCAGTGTaGACAAGATCGAGTCGGCGCTGGTCCAGCAAGGGATCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: SYLTRLFLSSIKAAV*TRSSRRWSSKGSPL
Trigger: CAAGGGAGATCCCTTGCTGGACCAGCGCCGACTCGATCTTGTTCACACTGCTGCCTTGATGCTGGACAAGAACAATCTGGTCAAGTACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp CGACTGAGCTGTCGCTGCAGCCAGAAGGCATCGATATCCCGAGGGTaGAAATCCTTCTTCTTAGAACTCATCAGTTCGCCTGAGGCTACA +
Preference number: 5 (lower is better)
Translates to: RLSCRCSQKASISRG*KSFFLELISSPEAT
Trigger: TGTAGCCTCAGGCGAACTGATGAGTTCTAAGAAGAAGGATTTGCACCCTCGGGATATCGATGCCTTCTGGCTGCAGCGACAGCTCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp GAGCTTACTCTGGATCCGGTTCAGCGTTTTGAAGCCCTCAAATCCTaGCTGGGCATACTTTGGCAGCTTCTCCACCGGGAGCAATTGTTC +
Preference number: 5 (lower is better)
Translates to: ELTLDPVQRFEALKS*LGILWQLLHREQLF
Trigger: GAACAATTGCTCCCGGTGGAGAAGCTGCCAAAGTATGCCCAGGCAGGATTTGAGGGCTTCAAAACGCTGAACCGGATCCAGAGTAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp ATCTGTAAGCTGTGCCCAACCTCGGTTCAGGACAATTTCGAAGATTaGACGCATCAACCGGCCAGCCGACTGGGTCACATACACCATGTC +
Preference number: 5 (lower is better)
Translates to: ICKLCPTSVQDNFED*THQPASRLGHIHHV
Trigger: GACATGGTGTATGTGACCCAGTCGGCTGGCCGGTTGATGCGTGCAATCTTCGAAATTGTCCTGAACCGAGGTTGGGCACAGCTTACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp GGGTACTTCTCTGGTAGGATCAGATGCCGGAAGGAGACAGGTAGCTaGGTCTCACAAGAGAGCCAGCGATCAGACACTACTCGAATGAAG +
Preference number: 5 (lower is better)
Translates to: GYFSGRIRCRKETGS*VSQESQRSDTTRMK
Trigger: CTTCATTCGAGTAGTGTCTGATCGCTGGCTCTCTTGTGAGACGCAGCTACCTGTCTCCTTCCGGCATCTGATCCTACCAGAGAAGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp AGGCTCTCAAAAGCACTGTTTCTCAGAGCAGACACAGGCAATGGCTaGAGGTCCAACAGTTCGGTTGGAGGTGGGTACTTCTCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: RLSKALFLRADTGNG*RSNSSVGGGYFSGR
Trigger: CCTACCAGAGAAGTACCCACCTCCAACCGAACTGTTGGACCTGCAGCCATTGCCTGTGTCTGCTCTGAGAAACAGTGCTTTTGAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp ACCTCATCCACCACAAAGAGGTTAATGTTCTGGACGTTCTTGCGCTaGTTCCACCTCCGAGAGAGGATGTCCCACTTCTCAGGGGTACTG +
Preference number: 5 (lower is better)
Translates to: TSSTTKRLMFWTFLR*FHLRERMSHFSGVL
Trigger: CAGTACCCCTGAGAAGTGGGACATCCTCTCTCGGAGGTGGAAGCAGCGCAAGAACGTCCAGAACATTAACCTCTTTGTGGTGGATGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCACTCTGGACTGTACACTaGGGTACCTTTAATGATGAC +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSLWTVH*GTFNDD
Trigger: GTCATCATTAAAGGTACCCAAGTGTACAGTCCAGAG...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATCGTACTTGACCAGATaGTTCTTGTCCAGCATCAAG +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSSYLTR*FLSSIK
Trigger: CTTGATGCTGGACAAGAACAATCTGGTCAAGTACGA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATCATCCTGGGCATACTaGGCCTTCAGCAGAAAATAT +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSSSWAY*AFSRKY
Trigger: ATATTTTCTGCTGAAGGCCAAGTATGCCCAGGATGA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGGTCCAACAGTTCGGTaGGAGGTGGGTACTTCTCTG +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASGPTVR*EVGTSL
Trigger: CAGAGAAGTACCCACCTCCAACCGAACTGTTGGACC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp CAGACGATAATCTGTGTGGCACTGATTTCCTCCTTGCATAGCTGGTaGTCCCCAGTCAGCTCAGCAACAGTGATGCCATATGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QTIICVALISSLHSW*SPVSSATVMPYVAR
Trigger: CCTGGCCACATATGGCATCACTGTTGCTGAGCTGACTGGGGATCACCAGCTATGCAAGGAGGAAATCAGTGCCACACAGATTATCGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp CTGCAGGATATCCAGTGCTCCCAGCTCTGTCCAACGCCCCTTCTCTaGACTGTACACTTGGGTACCTTTAATGATGACTGTATGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LQDIQCSQLCPTPLL*TVHLGTFNDDCMCR
Trigger: CCTGCACATACAGTCATCATTAAAGGTACCCAAGTGTACAGTCCAGAGAAGGGGCGTTGGACAGAGCTGGGAGCACTGGATATCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAATCCGGTTCAGCGTTTaGAAGCCCTCAAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASIRFSV*KPSNPA
Trigger: GGCAGGATTTGAGGGCTTCAAAACGCTGAACCGGAT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGGACAATTTCGAAGATaGCACGCATCAACCGGCCAG +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASGQFRR*HASTGQ
Trigger: CTGGCCGGTTGATGCGTGCAATCTTCGAAATTGTCC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACAGTAACTGGATGTGGACTGGGGACAGCAGCGGCCTGAATGGCCAGACCTCATTGTTCTCAATGGTCTaGGTGACAATCTCAGCATTG +
Preference number: 5 (lower is better)
Translates to: DSNWMWTGDSSGLNGQTSLFSMV*VTISAL
Trigger: CAATGCTGAGATTGTCACCAAGACCATTGAGAACAA...TGAGGTCTGGCCATTCAGGCCGCTGCTGTCCCCAGTCCACATCCAGTTACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGCCTGCAGCAGCAGATaGGTCTTCACATGTGGATCA +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASACSSR*VFTCGS
Trigger: TGATCCACATGTGAAGACCAATCTGCTGCTGCAGGC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAAGTCTAGCTTCACCTaGGCTTTCTGCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRKSSFT*AFCCRV
Trigger: GACCCTGCAGCAGAAAGCCAAGGTGAAGCTAGACTT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp TTCTTGCCCAGGTTTACCAGCACATGGTATCTGGTATCATCTGTCTaGCCCAGCAGCAGGTCAATCTCCCGTCTTCTCTCCTTGTCTCGA +
Preference number: 5 (lower is better)
Translates to: FLPRFTSTWYLVSSV*PSSRSISRLLSLSR
Trigger: TCGAGACAAGGAGAGAAGACGGGAGATTGACCTGCTGCTGGGTCAGACAGATGATACCAGATACCATGTGCTGGTAAACCTGGGCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp ATACACCATGTCAGCCATCAGCGCAAAGCCTTCGAGTTTCAGCTGTaGGATGAAGGCTTGGAGAAGCACGTTGATCTTAGCGCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: IHHVSHQRKAFEFQL*DEGLEKHVDLSAGF
Trigger: GAACCCAGCGCTAAGATCAACGTGCTTCTCCAAGCCTTCATCTCACAGCTGAAACTCGAAGGCTTTGCGCTGATGGCTGACATGGTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp TTACTCTGGATCCGGTTCAGCGTTTTGAAGCCCTCAAATCCTGCCTaGGCATACTTTGGCAGCTTCTCCACCGGGAGCAATTGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLWIRFSVLKPSNPA*AYFGSFSTGSNCSS
Trigger: AGAAGAACAATTGCTCCCGGTGGAGAAGCTGCCAAAGTATGCCCAGGCAGGATTTGAGGGCTTCAAAACGCTGAACCGGATCCAGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp GAGCAGATCACTTCCAAGACAGGCCCATTCTCGCCCCCAATAAGGTaGACCTCATCCACCACAAAGAGGTTAATGTTCTGGACGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EQITSKTGPFSPPIR*TSSTTKRLMFWTFL
Trigger: CAAGAACGTCCAGAACATTAACCTCTTTGTGGTGGATGAGGTCCACCTTATTGGGGGCGAGAATGGGCCTGTCTTGGAAGTGATCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGTACTGATGATGATGTaGCCTTTGCCCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASVLMMM*PLPRSF
Trigger: GAAGCTCCTGGGCAAAGGCAACATCATCATCAGTAC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAACATTAGGATGGAAGTaGAAGGTGGAGGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRTLGWK*KVEVAL
Trigger: CAGTGCCACCTCCACCTTCAACTTCCATCCTAATGT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGATCCACAGCATCCTGCTaGTTCTCAATGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRSTASC*FSMVLV
Trigger: CACCAAGACCATTGAGAACAAGCAGGATGCTGTGGA...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp GGTCTGCTTACGAGATGGGACAAAAACGATGACAGGCTTCTTGGGTaGGTGTTTGGTGATAGCATGGTACACAGGCTTGGCCATAGAGAG +
Preference number: 5 (lower is better)
Translates to: GLLTRWDKNDDRLLG*VFGDSMVHRLGHRE
Trigger: CTCTCTATGGCCAAGCCTGTGTACCATGCTATCACCAAACACTCACCCAAGAAGCCTGTCATCGTTTTTGTCCCATCTCGTAAGCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGACTTGGAGCACAAGATTaGAGTTCGCCTTGTACTCGT +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRLGAQD*SSPCTR
Trigger: ACGAGTACAAGGCGAACTCAAATCTTGTGCTCCAAG...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATCCCGTCTTCTCTCCTaGTCTCGAAGCTTTTCATTC +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASSRLLS*SRSFSF
Trigger: GAATGAAAAGCTTCGAGACAAGGAGAGAAGACGGGA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATTCAGCTCCAAGTTCTaGCACTGCTCTGCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASFSSKF*HCSASV
Trigger: TACAGAAGCAGAGCAGTGCAAGAACTTGGAGCTGAA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp CAGCTCTACTTTCAGCGTAGAGCGTGTAATAGGCTGCAGGTGCACTaGCAACTCCAACTTGGGGAAAAGATGGACATACTTGTGGATGGT +
Preference number: 5 (lower is better)
Translates to: QLYFQRRACNRLQVH*QLQLGEKMDILVDG
Trigger: ACCATCCACAAGTATGTCCATCTTTTCCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATTACACGCTCTACGCTGAAAGTAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp GTAGCTGCGTCTCACAAGAGAGCCAGCGATCAGACACTACTCGAATaGAGTACTGAGGAGGTAGTGGTTCAAAGACTGGAACAAAGAACG +
Preference number: 5 (lower is better)
Translates to: VAASHKRASDQTLLE*STEEVVVQRLEQRT
Trigger: CGTTCTTTGTTCCAGTCTTTGAACCACTACCTCCTCAGTACTTCATTCGAGTAGTGTCTGATCGCTGGCTCTCTTGTGAGACGCAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp GGTGTGATAGTCAGCTCTACTTTCAGCGTAGAGCGTGTAATAGGCTaGAGGTGCACTGACAACTCCAACTTGGGGAAAAGATGGACATAC +
Preference number: 5 (lower is better)
Translates to: GVIVSSTFSVERVIG*RCTDNSNLGKRWTY
Trigger: GTATGTCCATCTTTTCCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATTACACGCTCTACGCTGAAAGTAGAGCTGACTATCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCCACATCAGGGCCACGTaGGTCTTGCCCGCACCAGTG +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPHIRAT*VLPAPV
Trigger: CACTGGTGCGGGCAAGACCAACGTGGCCCTGATGTG...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAATTGTGCCGTCCATGTaGATGTGTTTCCCTATCTCT +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASIVPSM*MCFPIS
Trigger: AGAGATAGGGAAACACATCAACATGGACGGCACAAT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCATTGAAGTCATCCACATaGATTGTGCCGTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASLKSST*IVPSML
Trigger: CAACATGGACGGCACAATCAATGTGGATGACTTCAA...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGTCTTCTTGTCGTACTaGACCAGATTGTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASVFLSY*TRLFLS
Trigger: GGACAAGAACAATCTGGTCAAGTACGACAAGAAGAC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAAGTTGCCTGTCTTCTaGTCGTACTTGACCAGATTG +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRKLPVF*SYLTRL
Trigger: CAATCTGGTCAAGTACGACAAGAAGACAGGCAACTT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGACTTACAGTGATGTTCTaGAACTCTGAGGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRLTVMF*NSEDKE
Trigger: CTCCTTGTCCTCAGAGTTCAAGAACATCACTGTAAG...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGACGCTTGTCAATCATCTaGCAGAGATTCAGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRRLSII*QRFRVL
Trigger: TAAGACCCTGAATCTCTGCAAGATGATTGACAAGCG...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAAAAAGATGGACATACTaGTGGATGGTCTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASKRWTY*WMVFPI
Trigger: GATGGGGAAGACCATCCACAAGTATGTCCATCTTTT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAACTGACAACTCCAACTaGGGGAAAAGATGGACATAC +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRTDNSN*GKRWTY
Trigger: GTATGTCCATCTTTTCCCCAAGTTGGAGTTGTCAGT...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAGTGACAATCTCAGCATaGAAGTGGTCATGCATACAG +
Preference number: 5 (lower is better)
Translates to: PQPDRPSPHSCFQVQCLRVTISA*KWSCIQ
Trigger: CTGTATGCATGACCACTTCAATGCTGAGATTGTCAC...TCTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp CAGCTCCAGCTTCTCCTCCTCTCTTACAGTGATGTTCTTGAACTCTaGGGACAAGGAGAACACTCGGAAAAGCTCAATCTCACTCAGAGT +
Preference number: 5 (lower is better)
Translates to: QLQLLLLSYSDVLEL*GQGEHSEKLNLTQS
Trigger: ACTCTGAGTGAGATTGAGCTTTTCCGAGTGTTCTCCTTGTCCTCAGAGTTCAAGAACATCACTGTAAGAGAGGAGGAGAAGCTGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp GTCTCACAAGAGAGCCAGCGATCAGACACTACTCGAATGAAGTACTaGGGAGGTAGTGGTTCAAAGACTGGAACAAAGAACGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: VSQESQRSDTTRMKY*GGSGSKTGTKNVMR
Trigger: CCTCATCACGTTCTTTGTTCCAGTCTTTGAACCACTACCTCCTCAGTACTTCATTCGAGTAGTGTCTGATCGCTGGCTCTCTTGTGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp ATAGTCAGCTCTACTTTCAGCGTAGAGCGTGTAATAGGCTGCAGGTaGACTGACAACTCCAACTTGGGGAAAAGATGGACATACTTGTGG +
Preference number: 5 (lower is better)
Translates to: IVSSTFSVERVIGCR*TDNSNLGKRWTYLW
Trigger: CCACAAGTATGTCCATCTTTTCCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATTACACGCTCTACGCTGAAAGTAGAGCTGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAATTCTCGGTCATCACTaGCTGTCTTCAAAATCTCCA +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASILGHH*LSSKSP
Trigger: TGGAGATTTTGAAGACAGCAAGTGATGACCGAGAAT...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp ACTTGCTGTCTTCAAAATCTCCAACACCTCATCTGCCTTCTTCTGTaGCACAATGGCATCATCATAGAAACGACTGAGCTGTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TCCLQNLQHLICLLL*HNGIIIETTELSLQ
Trigger: CTGCAGCGACAGCTCAGTCGTTTCTATGATGATGCCATTGTGTCACAGAAGAAGGCAGATGAGGTGTTGGAGATTTTGAAGACAGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp AAGAAACAGACCCAAAGTGTCCTTCTCCAGACACATGTCACGGATTaGCCTTGCTGTCTTCCCAGTTTCTTTTCGAGAATGGACAAACAC +
Preference number: 5 (lower is better)
Translates to: KKQTQSVLLQTHVTD*PCCLPSFFSRMDKH
Trigger: GTGTTTGTCCATTCTCGAAAAGAAACTGGGAAGACAGCAAGGGCAATCCGTGACATGTGTCTGGAGAAGGACACTTTGGGTCTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 90 bp TGTTGTCATCCATATTCTGTATCTCCTTGTCGCCACCGTAGTCTGTaGTCTTCTTGCCCAGGTTTACCAGCACATGGTATCTGGTATCAT +
Preference number: 5 (lower is better)
Translates to: CCHPYSVSPCRHRSL*SSCPGLPAHGIWYH
Trigger: ATGATACCAGATACCATGTGCTGGTAAACCTGGGCAAGAAGATCACAGACTACGGTGGCGACAAGGAGATACAGAATATGGATGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp CTTGTCAATCATCTTGCAGAGATTCAGGGTCTTATCTGTAAGCTGTaGCCAACCTCGGTTCAGGACAATTTCGAAGATTGCACGCATCAA +
Preference number: 5 (lower is better)
Translates to: LVNHLAEIQGLICKL*PTSVQDNFEDCTHQ
Trigger: TTGATGCGTGCAATCTTCGAAATTGTCCTGAACCGAGGTTGGGCACAGCTTACAGATAAGACCCTGAATCTCTGCAAGATGATTGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp GACCTCAGCCTGACAGACCTAGTCCACATTCCTGTTTTCAGGTTCAGTGCCTCAGAAAGGAAATTTATCTaGGTAAAGGCTCTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: DLSLTDLVHIPVFRFSASERKFI*VKALKS
Trigger: GCTTTTGAGAGCCTTTACCAAGATAAATTTCCTTTC...TGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCATGTTCTGGACGTTCTaGCGCTGCTTCCACCTCCGA +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPMFWTF*RCFHLR
Trigger: TCGGAGGTGGAAGCAGCGCAAGAACGTCCAGAACAT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCCTGTGGTTTGGTCCGTaGAGCCTTATCTCCCATTCG +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPLWFGP*SLISHS
Trigger: CGAATGGGAGATAAGGCTCAACGGACCAAACCACAG...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGCCACATCCTTGGCATaGGAGAGTGAGGAGCTAAGT +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPATSLA*ESEELS
Trigger: ACTTAGCTCCTCACTCTCCAATGCCAAGGATGTGGC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 90 bp AGCAAAAAGATCTTCTACAAGTGTTCGGTCAACTCTAGTCATGCCTaGATGATGAATAGCAAAGCCATAGGGCAAAAGATCCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SKKIFYKCSVNSSHA*MMNSKAIGQKILQL
Trigger: GAGCTGAAGGATCTTTTGCCCTATGGCTTTGCTATTCATCATGCAGGCATGACTAGAGTTGACCGAACACTTGTAGAAGATCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACACCCCACGCCAGAGTaGCGGTGGAAACTAAAACCT +
Preference number: 5 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRHPTPE*RWKLKP
Trigger: AGGTTTTAGTTTCCACCGCAACTCTGGCGTGGGGTG...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGACTGCCACATGCGCTaGTCAATCATCTTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPDCHMR*SIILQR
Trigger: TCTCTGCAAGATGATTGACAAGCGCATGTGGCAGTC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGATCACGTTTTCTCCTCTaGGCCCGTCTTTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRSRFLL*ARLSSC
Trigger: GCAGGAAGAAAGACGGGCCAAGAGGAGAAAACGTGA...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCGAGTCGGACATCTTCTaGGGTCATCTCAATGTTTCG +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPESDIF*GHLNVS
Trigger: CGAAACATTGAGATGACCCAAGAAGATGTCCGACTC...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCAGAACAATTTCCGCATaGAGCATGTCAGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPRTISA*SMSGSL
Trigger: CAAGCTGCCTGACATGCTCAATGCGGAAATTGTTCT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCATGATGATGTTGCCTTaGCCCAGGAGCTTCAGATCT +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPMMMLP*PRSFRS
Trigger: AGATCTGAAGCTCCTGGGCAAAGGCAACATCATCAT...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 90 bp ACTTTAATGAAGTCAAACGTGTTGAAACCAAGGAGCAAAACCAGTTaGTTCTCACATTCTCGGTCATCACTTGCTGTCTTCAAAATCTCC +
Preference number: 5 (lower is better)
Translates to: TLMKSNVLKPRSKTS*FSHSRSSLAVFKIS
Trigger: GGAGATTTTGAAGACAGCAAGTGATGACCGAGAATGTGAGAACCAACTGGTTTTGCTCCTTGGTTTCAACACGTTTGACTTCATTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp CCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGACCCTTCTTGGGTGAGTGTTaGGTGATAGCATGGTACACA +
Preference number: 5 (lower is better)
Translates to: PPNIVQFMLDMTLENTRPFLGEC*VIAWYT
Trigger: TGTGTACCATGCTATCACCAAACACTCACCCAAGAA...GGGTCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGAAGTTCACTGCATCCTTaGCATTCTGGACATTGCCCA +
Preference number: 5 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRSSLHP*HSGHCP
Trigger: TGGGCAATGTCCAGAATGCAAAGGATGCAGTGAACT...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGATTGACCAGATTGTTCTaGTCCAGCATCAAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRLTRLF*SSIKAA
Trigger: TGCTGCCTTGATGCTGGACAAGAACAATCTGGTCAA...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS-3UTR CAA 90 bp ATGCCTCCAAATATTGTACAGTTCATGCTTGACATGACACTTGAAAATACAAGATTTAACAGGGTCTCTTaGAGTGTGCTGTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: MPPNIVQFMLDMTLENTRFNRVS*SVLSLS
Trigger: GCTCAGTGACAGCACACTCAAAGAGACCCTGTTAAA...TCTTGTATTTTCAAGTGTCATGTCAAGCATGAACTGTACAATATTTGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp AGCTCCCCATGGGATGTGATGAGGATGCCTTCACCCTaGGTGTCATACTGCGGCCGTCCAGCACGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SSPWDVMRMPSP*VSYCGRPARPS
Trigger: GCTGGGCCGTGCTGGACGGCCGCAGTATGACACCAAGGGTGAAGGCATCCTCATCACATCCCATGGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp CCTCTCCCGTCGGTTCATCCCGGCGGGTCCGGTCAATaGGAGAGCGGTCAGCTTGGAGCACAAGATTTGAGT +
Preference number: 6 (lower is better)
Translates to: PLPSVHPGGSGQ*ESGQLGAQDLS
Trigger: ACTCAAATCTTGTGCTCCAAGCTGACCGCTCTCTCATTGACCGGACCCGCCGGGATGAACCGACGGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp GCCCAGCCAGTGAGCCACATCCTTGGCATTGGAGAGTaGGGAGCTAAGTGCCACAATGCGAATGGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: AQPVSHILGIGE*GAKCHNANGPL
Trigger: GAGCGGCCCATTCGCATTGTGGCACTTAGCTCCTCACTCTCCAATGCCAAGGATGTGGCTCACTGGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp CCTTTACGCTGGCGTCGGAAGGACCCGTCAGGAAGCTaGCAGCGCTTATTGGCCATGAAGTGGCTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PLRWRRKDPSGS*QRLLAMKWLPW
Trigger: CCAAGGAAGCCACTTCATGGCCAATAAGCGCTGCCAGCTTCCTGACGGGTCCTTCCGACGCCAGCGTAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp TCCCTATCTCTCGGAGCATACACATCAGGGCCACGTTaGTCTTGCCCGCACCAGTGGGAGCACACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SLSLGAYTSGPR*SCPHQWEHTAA
Trigger: TGCTGCTGTGTGCTCCCACTGGTGCGGGCAAGACCAACGTGGCCCTGATGTGTATGCTCCGAGAGATAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp ATCTCTCGGAGCATACACATCAGGGCCACGTTGGTCTaGCCCGCACCAGTGGGAGCACACAGCAGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: ISRSIHIRATLV*PAPVGAHSSRF
Trigger: GAACCTGCTGCTGTGTGCTCCCACTGGTGCGGGCAAGACCAACGTGGCCCTGATGTGTATGCTCCGAGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp TTCCCTATCTCTCGGAGCATACACATCAGGGCCACGTaGGTCTTGCCCGCACCAGTGGGAGCACACAGCAGC +
Preference number: 6 (lower is better)
Translates to: FPISRSIHIRAT*VLPAPVGAHSS
Trigger: GCTGCTGTGTGCTCCCACTGGTGCGGGCAAGACCAACGTGGCCCTGATGTGTATGCTCCGAGAGATAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp GATGTGATGAGGATGCCTTCACCCTTGGTGTCATACTaGGGCCGTCCAGCACGGCCCAGCATCTGCAGGATA +
Preference number: 6 (lower is better)
Translates to: DVMRMPSPLVSY*GRPARPSICRI
Trigger: TATCCTGCAGATGCTGGGCCGTGCTGGACGGCCGCAGTATGACACCAAGGGTGAAGGCATCCTCATCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp GGTGCAGTGCAGGAACCTCTGCCGCTGGATGTCTGCTaGACAGGTAGTGAGGATGTCTATTGCAGTGAGGCG +
Preference number: 6 (lower is better)
Translates to: GAVQEPLPLDVC*TGSEDVYCSEA
Trigger: CGCCTCACTGCAATAGACATCCTCACTACCTGTGCAGCAGACATCCAGCGGCAGAGGTTCCTGCACTGCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp CTGGATCCGGTTCAGCGTTTTGAAGCCCTCAAATCCTaGCTGGGCATACTTTGGCAGCTTCTCCACCGGGAG +
Preference number: 6 (lower is better)
Translates to: LDPVQRFEALKS*LGILWQLLHRE
Trigger: CTCCCGGTGGAGAAGCTGCCAAAGTATGCCCAGGCAGGATTTGAGGGCTTCAAAACGCTGAACCGGATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp TCCCGGCGGGTCCGGTCAATGAGAGAGCGGTCAGCTTaGAGCACAAGATTTGAGTTCGCCTTGTACTCGTAC +
Preference number: 6 (lower is better)
Translates to: SRRVRSMRERSA*STRFEFALYSY
Trigger: GTACGAGTACAAGGCGAACTCAAATCTTGTGCTCCAAGCTGACCGCTCTCTCATTGACCGGACCCGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GCTGTGCCCAACCTCGGTTCAGGACAATTTCGAAGATaGCACGCATCAACCGGCCAGCCGACTGGGTCACAT +
Preference number: 6 (lower is better)
Translates to: AVPNLGSGQFRR*HASTGQPTGSH
Trigger: ATGTGACCCAGTCGGCTGGCCGGTTGATGCGTGCAATCTTCGAAATTGTCCTGAACCGAGGTTGGGCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GGGGCCACATCCATCTCGTCCTCAATACTGATGCATTaGGACTGCTCCAGGTCACTGAGGGTCTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: GATSISSSILMH*DCSRSLRVCST
Trigger: GGTGGAGCAGACCCTCAGTGACCTGGAGCAGTCCAAATGCATCAGTATTGAGGACGAGATGGATGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp AGGTTCAGAGGGGCCACATCCATCTCGTCCTCAATACTGATGCATTaGGACTGCTCCAGGTCACTGAGGGTCTGCTCCACCAGCTCTGAC +
Preference number: 6 (lower is better)
Translates to: RFRGATSISSSILMH*DCSRSLRVCSTSSD
Trigger: GTCAGAGCTGGTGGAGCAGACCCTCAGTGACCTGGAGCAGTCCAAATGCATCAGTATTGAGGACGAGATGGATGTGGCCCCTCTGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp CTGTGCCCAACCTCGGTTCAGGACAATTTCGAAGATTaGACGCATCAACCGGCCAGCCGACTGGGTCACATA +
Preference number: 6 (lower is better)
Translates to: LCPTSVQDNFED*THQPASRLGHI
Trigger: TATGTGACCCAGTCGGCTGGCCGGTTGATGCGTGCAATCTTCGAAATTGTCCTGAACCGAGGTTGGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp TTGGAGCCAGAGCCTCTCCACCCTGGTCCAAATCCATaGTTTCCAGATCTGTGTCCATTCGGGACTGACGGA +
Preference number: 6 (lower is better)
Translates to: LEPEPLHPGPNP*FPDLCPFGTDG
Trigger: TCCGTCAGTCCCGAATGGACACAGATCTGGAAACCATGGATTTGGACCAGGGTGGAGAGGCTCTGGCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp CGTCGGAAGGACCCGTCAGGAAGCTGGCAGCGCTTATaGGCCATGAAGTGGCTTCCTTGGGTAAAAACAAGG +
Preference number: 6 (lower is better)
Translates to: RRKDPSGSWQRL*AMKWLPWVKTR
Trigger: CCTTGTTTTTACCCAAGGAAGCCACTTCATGGCCAATAAGCGCTGCCAGCTTCCTGACGGGTCCTTCCGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp TCTCCTCTTGGCCCGTCTTTCTTCCTGCATCTGTGGTTTGGTCCGTaGAGCCTTATCTCCCATTCGGGTTCCCTCCAACTTCCCAACCAG +
Preference number: 6 (lower is better)
Translates to: SPLGPSFFLHLWFGP*SLISHSGSLQLPNQ
Trigger: CTGGTTGGGAAGTTGGAGGGAACCCGAATGGGAGATAAGGCTCAACGGACCAAACCACAGATGCAGGAAGAAAGACGGGCCAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp CCCGTCAGGAAGCTGGCAGCGCTTATTGGCCATGAAGTGGCTTCCTaGGGTAAAAACAAGGTCCTCCAAATCCAGAACCTGCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: PVRKLAALIGHEVAS*GKNKVLQIQNLPWS
Trigger: GCTCCAAGGCAGGTTCTGGATTTGGAGGACCTTGTTTTTACCCAAGGAAGCCACTTCATGGCCAATAAGCGCTGCCAGCTTCCTGACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp TTACGCTGGCGTCGGAAGGACCCGTCAGGAAGCTGGCAGCGCTTATaGGCCATGAAGTGGCTTCCTTGGGTAAAAACAAGGTCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: LRWRRKDPSGSWQRL*AMKWLPWVKTRSSK
Trigger: TTTGGAGGACCTTGTTTTTACCCAAGGAAGCCACTTCATGGCCAATAAGCGCTGCCAGCTTCCTGACGGGTCCTTCCGACGCCAGCGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp AGGTGGACCTCATCCACCACAAAGAGGTTAATGTTCTGGACGTTCTaGCGCTGCTTCCACCTCCGAGAGAGGATGTCCCACTTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: RWTSSTTKRLMFWTF*RCFHLRERMSHFSG
Trigger: CCCTGAGAAGTGGGACATCCTCTCTCGGAGGTGGAAGCAGCGCAAGAACGTCCAGAACATTAACCTCTTTGTGGTGGATGAGGTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp GCCCGTCTTTCTTCCTGCATCTGTGGTTTGGTCCGTTaGGCCTTATCTCCCATTCGGGTTCCCTCCAACTTC +
Preference number: 6 (lower is better)
Translates to: ARLSSCICGLVR*ALSPIRVPSNF
Trigger: GAAGTTGGAGGGAACCCGAATGGGAGATAAGGCTCAACGGACCAAACCACAGATGCAGGAAGAAAGACGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp ACCAGATTGTTCTTGTCCAGCATCAAGGCAGCAGTGTaGACAAGATCGAGTCGGCGCTGGTCCAGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: TRLFLSSIKAAV*TRSSRRWSSKG
Trigger: TCCCTTGCTGGACCAGCGCCGACTCGATCTTGTTCACACTGCTGCCTTGATGCTGGACAAGAACAATCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp TCTGGTAGGATCAGATGCCGGAAGGAGACAGGTAGCTaGGTCTCACAAGAGAGCCAGCGATCAGACACTACT +
Preference number: 6 (lower is better)
Translates to: SGRIRCRKETGS*VSQESQRSDTT
Trigger: AGTAGTGTCTGATCGCTGGCTCTCTTGTGAGACGCAGCTACCTGTCTCCTTCCGGCATCTGATCCTACCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp TCCTCTTGGCCCGTCTTTCTTCCTGCATCTGTGGTTTaGTCCGTTGAGCCTTATCTCCCATTCGGGTTCCCT +
Preference number: 6 (lower is better)
Translates to: SSWPVFLPASVV*SVEPYLPFGFP
Trigger: AGGGAACCCGAATGGGAGATAAGGCTCAACGGACCAAACCACAGATGCAGGAAGAAAGACGGGCCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp ATCCGGTTCAGCGTTTTGAAGCCCTCAAATCCTGCCTaGGCATACTTTGGCAGCTTCTCCACCGGGAGCAAT +
Preference number: 6 (lower is better)
Translates to: IRFSVLKPSNPA*AYFGSFSTGSN
Trigger: ATTGCTCCCGGTGGAGAAGCTGCCAAAGTATGCCCAGGCAGGATTTGAGGGCTTCAAAACGCTGAACCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp AGGTGGACCTCATCCACCACAAAGAGGTTAATGTTCTaGACGTTCTTGCGCTGCTTCCACCTCCGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: RWTSSTTKRLMF*TFLRCFHLRER
Trigger: CCTCTCTCGGAGGTGGAAGCAGCGCAAGAACGTCCAGAACATTAACCTCTTTGTGGTGGATGAGGTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GAGCGGTCAGCTTGGAGCACAAGATTTGAGTTCGCCTaGTACTCGTACTGCAAACTGCGGGCAGTCACATCC +
Preference number: 6 (lower is better)
Translates to: ERSAWSTRFEFA*YSYCKLRAVTS
Trigger: GGATGTGACTGCCCGCAGTTTGCAGTACGAGTACAAGGCGAACTCAAATCTTGTGCTCCAAGCTGACCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GGCCCGTCTTTCTTCCTGCATCTGTGGTTTGGTCCGTaGAGCCTTATCTCCCATTCGGGTTCCCTCCAACTT +
Preference number: 6 (lower is better)
Translates to: GPSFFLHLWFGP*SLISHSGSLQL
Trigger: AAGTTGGAGGGAACCCGAATGGGAGATAAGGCTCAACGGACCAAACCACAGATGCAGGAAGAAAGACGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp CTGGATGTCTGCTGCACAGGTAGTGAGGATGTCTATTaGAGTGAGGCGGGTCTGCTTACGAGATGGGACAAA +
Preference number: 6 (lower is better)
Translates to: LDVCCTGSEDVY*SEAGLLTRWDK
Trigger: TTTGTCCCATCTCGTAAGCAGACCCGCCTCACTGCAATAGACATCCTCACTACCTGTGCAGCAGACATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp CCGTCAGGAAGCTGGCAGCGCTTATTGGCCATGAAGTaGCTTCCTTGGGTAAAAACAAGGTCCTCCAAATCC +
Preference number: 6 (lower is better)
Translates to: PSGSWQRLLAMK*LPWVKTRSSKS
Trigger: GGATTTGGAGGACCTTGTTTTTACCCAAGGAAGCCACTTCATGGCCAATAAGCGCTGCCAGCTTCCTGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp TCATCCACCACAAAGAGGTTAATGTTCTGGACGTTCTaGCGCTGCTTCCACCTCCGAGAGAGGATGTCCCAC +
Preference number: 6 (lower is better)
Translates to: SSTTKRLMFWTF*RCFHLRERMSH
Trigger: GTGGGACATCCTCTCTCGGAGGTGGAAGCAGCGCAAGAACGTCCAGAACATTAACCTCTTTGTGGTGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp ACTGCATCCTTTGCATTCTGGACATTGCCCAGAACAATTTCCGCATaGAGCATGTCAGGCAGCTTGGAGACCATCTGGCTCTCGATAGGC +
Preference number: 6 (lower is better)
Translates to: TASFAFWTLPRTISA*SMSGSLETIWLSIG
Trigger: GCCTATCGAGAGCCAGATGGTCTCCAAGCTGCCTGACATGCTCAATGCGGAAATTGTTCTGGGCAATGTCCAGAATGCAAAGGATGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp AGGCGGGTCTGCTTACGAGATGGGACAAAAACGATGACAGGCTTCTaGGGTGAGTGTTTGGTGATAGCATGGTACACAGGCTTGGCCATA +
Preference number: 6 (lower is better)
Translates to: RRVCLRDGTKTMTGF*GECLVIAWYTGLAI
Trigger: TATGGCCAAGCCTGTGTACCATGCTATCACCAAACACTCACCCAAGAAGCCTGTCATCGTTTTTGTCCCATCTCGTAAGCAGACCCGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp AGGTTTACCAGCACATGGTATCTGGTATCATCTGTCTaGCCCAGCAGCAGGTCAATCTCCCGTCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: RFTSTWYLVSSV*PSSRSISRLLS
Trigger: GGAGAGAAGACGGGAGATTGACCTGCTGCTGGGTCAGACAGATGATACCAGATACCATGTGCTGGTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp AAATCCATGGTTTCCAGATCTGTGTCCATTCGGGACTaGCGGACTCTCTCTCTCCGGGACCTTTCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: KSMVSRSVSIRD*RTLSLRDLSSL
Trigger: CAGAGAAGAAAGGTCCCGGAGAGAGAGAGTCCGTCAGTCCCGAATGGACACAGATCTGGAAACCATGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp GTCAGCCATCAGCGCAAAGCCTTCGAGTTTCAGCTGTaGGATGAAGGCTTGGAGAAGCACGTTGATCTTAGC +
Preference number: 6 (lower is better)
Translates to: VSHQRKAFEFQL*DEGLEKHVDLS
Trigger: GCTAAGATCAACGTGCTTCTCCAAGCCTTCATCTCACAGCTGAAACTCGAAGGCTTTGCGCTGATGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp ACCACAAAGAGGTTAATGTTCTGGACGTTCTTGCGCTaGTTCCACCTCCGAGAGAGGATGTCCCACTTCTCA +
Preference number: 6 (lower is better)
Translates to: TTKRLMFWTFLR*FHLRERMSHFS
Trigger: TGAGAAGTGGGACATCCTCTCTCGGAGGTGGAAGCAGCGCAAGAACGTCCAGAACATTAACCTCTTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp CAGGTAGTGAGGATGTCTATTGCAGTGAGGCGGGTCTaGTTACGAGATGGGACAAAAACGATGACAGGCTTC +
Preference number: 6 (lower is better)
Translates to: QVVRMSIAVRRV*LRDGTKTMTGF
Trigger: GAAGCCTGTCATCGTTTTTGTCCCATCTCGTAAGCAGACCCGCCTCACTGCAATAGACATCCTCACTACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp ACTTCCAAGACAGGCCCATTCTCGCCCCCAATAAGGTaGACCTCATCCACCACAAAGAGGTTAATGTTCTGG +
Preference number: 6 (lower is better)
Translates to: TSKTGPFSPPIR*TSSTTKRLMFW
Trigger: CCAGAACATTAACCTCTTTGTGGTGGATGAGGTCCACCTTATTGGGGGCGAGAATGGGCCTGTCTTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp CCCAGCCAGTTCACTGCATCCTTTGCATTCTGGACATaGCCCAGAACAATTTCCGCATTGAGCATGTCAGGC +
Preference number: 6 (lower is better)
Translates to: PSQFTASFAFWT*PRTISALSMSG
Trigger: GCCTGACATGCTCAATGCGGAAATTGTTCTGGGCAATGTCCAGAATGCAAAGGATGCAGTGAACTGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp GTGCAAATCCTTCTTCTTAGAACTCATCAGTTCGCCTaGGGCTACAAGATTAGCAGAGAGGGTGCAGCGCAC +
Preference number: 6 (lower is better)
Translates to: VQILLLRTHQFA*GYKISREGAAH
Trigger: GTGCGCTGCACCCTCTCTGCTAATCTTGTAGCCTCAGGCGAACTGATGAGTTCTAAGAAGAAGGATTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp TCTTCTGTGACACAATGGCATCATCATAGAAACGACTaGGCTGTCGCTGCAGCCAGAAGGCATCGATATCCC +
Preference number: 6 (lower is better)
Translates to: SSVTQWHHHRND*AVAAARRHRYP
Trigger: GGGATATCGATGCCTTCTGGCTGCAGCGACAGCTCAGTCGTTTCTATGATGATGCCATTGTGTCACAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp ATCTGTGTGGCACTGATTTCCTCCTTGCATAGCTGGTaGTCCCCAGTCAGCTCAGCAACAGTGATGCCATAT +
Preference number: 6 (lower is better)
Translates to: ICVALISSLHSW*SPVSSATVMPY
Trigger: ATATGGCATCACTGTTGCTGAGCTGACTGGGGATCACCAGCTATGCAAGGAGGAAATCAGTGCCACACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp TTGCATTCTGGACATTGCCCAGAACAATTTCCGCATTaGGCATGTCAGGCAGCTTGGAGACCATCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: LHSGHCPEQFPH*ACQAAWRPSGS
Trigger: AGAGCCAGATGGTCTCCAAGCTGCCTGACATGCTCAATGCGGAAATTGTTCTGGGCAATGTCCAGAATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp CCCGTCAGCAGCACTACCTTCTTGTTGAGCCTGTCCTaGAACTTCTCATACCAGTCCATGTATACCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PVSSTTFLLSLS*NFSYQSMYTCS
Trigger: AGAGCAGGTATACATGGACTGGTATGAGAAGTTTCAGGACAGGCTCAACAAGAAGGTAGTGCTGCTGACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp ACGAGATGGGACAAAAACGATGACAGGCTTCTTGGGTaGGTGTTTGGTGATAGCATGGTACACAGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: TRWDKNDDRLLG*VFGDSMVHRLG
Trigger: GCCAAGCCTGTGTACCATGCTATCACCAAACACTCACCCAAGAAGCCTGTCATCGTTTTTGTCCCATCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp GGTTCTGTGTCATTCTGCGATACAGAAAGGTCCAGGTaGGGTAGTCCACAGCATCCTGCTTGTTCTCAATGG +
Preference number: 6 (lower is better)
Translates to: GSVSFCDTERSR*GSPQHPACSQW
Trigger: CCATTGAGAACAAGCAGGATGCTGTGGACTACCTCACCTGGACCTTTCTGTATCGCAGAATGACACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp GTCAGCTCTACTTTCAGCGTAGAGCGTGTAATAGGCTaGAGGTGCACTGACAACTCCAACTTGGGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: VSSTFSVERVIG*RCTDNSNLGKR
Trigger: TCTTTTCCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATTACACGCTCTACGCTGAAAGTAGAGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp TGGTGGTGTAGTTTATGTAATAGTAGGCAGCAATCATaGCCAGGTTCAGAGGGGCCACATCCATCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: WWCSLCNSRQQS*PGSEGPHPSRP
Trigger: AGGACGAGATGGATGTGGCCCCTCTGAACCTGGGCATGATTGCTGCCTACTATTACATAAACTACACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp ATCTTCTTCACTACTTCCTCAGGAAGTTTTCGGAACTaGCGAAGAGGACACATGGACTGCCACATGCGCTTG +
Preference number: 6 (lower is better)
Translates to: IFFTTSSGSFRN*RRGHMDCHMRL
Trigger: CAAGCGCATGTGGCAGTCCATGTGTCCTCTTCGCCAGTTCCGAAAACTTCCTGAGGAAGTAGTGAAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp TTTGCATTCTGGACATTGCCCAGAACAATTTCCGCATaGAGCATGTCAGGCAGCTTGGAGACCATCTGGCTC +
Preference number: 6 (lower is better)
Translates to: FAFWTLPRTISA*SMSGSLETIWL
Trigger: GAGCCAGATGGTCTCCAAGCTGCCTGACATGCTCAATGCGGAAATTGTTCTGGGCAATGTCCAGAATGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GGACACATGGACTGCCACATGCGCTTGTCAATCATCTaGCAGAGATTCAGGGTCTTATCTGTAAGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: GHMDCHMRLSII*QRFRVLSVSCA
Trigger: GGCACAGCTTACAGATAAGACCCTGAATCTCTGCAAGATGATTGACAAGCGCATGTGGCAGTCCATGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp ACAGACCCAAAGTGTCCTTCTCCAGACACATGTCACGGATTGCCCTaGCTGTCTTCCCAGTTTCTTTTCGAGAATGGACAAACACGAGCA +
Preference number: 6 (lower is better)
Translates to: TDPKCPSPDTCHGLP*LSSQFLFENGQTRA
Trigger: TGCTCGTGTTTGTCCATTCTCGAAAAGAAACTGGGAAGACAGCAAGGGCAATCCGTGACATGTGTCTGGAGAAGGACACTTTGGGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp ACCCAAAGTGTCCTTCTCCAGACACATGTCACGGATTaGCCTTGCTGTCTTCCCAGTTTCTTTTCGAGAATG +
Preference number: 6 (lower is better)
Translates to: TQSVLLQTHVTD*PCCLPSFFSRM
Trigger: CATTCTCGAAAAGAAACTGGGAAGACAGCAAGGGCAATCCGTGACATGTGTCTGGAGAAGGACACTTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp GGTCTGCACAGTATCATTGGTGATATAGTAGTGACTTaGTATCCGGCCAAGTTCTGTCACCTGGAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: GLHSIIGDIVVT*YPAKFCHLEVA
Trigger: GGCAACTTCCAGGTGACAGAACTTGGCCGGATAGCAAGTCACTACTATATCACCAATGATACTGTGCAGACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp TCTACTTTCAGCGTAGAGCGTGTAATAGGCTGCAGGTaGACTGACAACTCCAACTTGGGGAAAAGATGGACA +
Preference number: 6 (lower is better)
Translates to: STFSVERVIGCR*TDNSNLGKRWT
Trigger: TGTCCATCTTTTCCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATTACACGCTCTACGCTGAAAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp GATGACGATGGGATATCCCCTGCAGGTTGTAGTAATTaGGGTTCTGTGTCATTCTGCGATACAGAAAGGTCC +
Preference number: 6 (lower is better)
Translates to: DDDGISPAGCSN*GSVSFCDTERS
Trigger: GGACCTTTCTGTATCGCAGAATGACACAGAACCCCAATTACTACAACCTGCAGGGGATATCCCATCGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GACCCAAAGTGTCCTTCTCCAGACACATGTCACGGATaGCCCTTGCTGTCTTCCCAGTTTCTTTTCGAGAAT +
Preference number: 6 (lower is better)
Translates to: DPKCPSPDTCHG*PLLSSQFLFEN
Trigger: ATTCTCGAAAAGAAACTGGGAAGACAGCAAGGGCAATCCGTGACATGTGTCTGGAGAAGGACACTTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp AGCTCCAGCTTCTCCTCCTCTCTTACAGTGATGTTCTaGAACTCTGAGGACAAGGAGAACACTCGGAAAAGC +
Preference number: 6 (lower is better)
Translates to: SSSFSSSLTVMF*NSEDKENTRKS
Trigger: GCTTTTCCGAGTGTTCTCCTTGTCCTCAGAGTTCAAGAACATCACTGTAAGAGAGGAGGAGAAGCTGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp TGCTTACGAGATGGGACAAAAACGATGACAGGCTTCTaGGGTGAGTGTTTGGTGATAGCATGGTACACAGGC +
Preference number: 6 (lower is better)
Translates to: CLRDGTKTMTGF*GECLVIAWYTG
Trigger: GCCTGTGTACCATGCTATCACCAAACACTCACCCAAGAAGCCTGTCATCGTTTTTGTCCCATCTCGTAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp GAAGAAACAGACCCAAAGTGTCCTTCTCCAGACACATGTCACGGATaGCCCTTGCTGTCTTCCCAGTTTCTTTTCGAGAATGGACAAACA +
Preference number: 6 (lower is better)
Translates to: EETDPKCPSPDTCHG*PLLSSQFLFENGQT
Trigger: TGTTTGTCCATTCTCGAAAAGAAACTGGGAAGACAGCAAGGGCAATCCGTGACATGTGTCTGGAGAAGGACACTTTGGGTCTGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp TCAGCAGCTGGTTGTAGGTCTGCACAGTATCATTGGTaGTATAGTAGTGACTTGCTATCCGGCCAAGTTCTG +
Preference number: 6 (lower is better)
Translates to: SAAGCRSAQYHW*YSSDLLSGQVL
Trigger: CAGAACTTGGCCGGATAGCAAGTCACTACTATATCACCAATGATACTGTGCAGACCTACAACCAGCTGCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp TTTCAGCGTAGAGCGTGTAATAGGCTGCAGGTGCACTaGCAACTCCAACTTGGGGAAAAGATGGACATACTT +
Preference number: 6 (lower is better)
Translates to: FQRRACNRLQVH*QLQLGEKMDIL
Trigger: AAGTATGTCCATCTTTTCCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATTACACGCTCTACGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp AGTGTCCTTCTCCAGACACATGTCACGGATTGCCCTTaGTGTCTTCCCAGTTTCTTTTCGAGAATGGACAAA +
Preference number: 6 (lower is better)
Translates to: SVLLQTHVTDCP*CLPSFFSRMDK
Trigger: TTTGTCCATTCTCGAAAAGAAACTGGGAAGACAGCAAGGGCAATCCGTGACATGTGTCTGGAGAAGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp ACTGTACACTTGGGTACCTTTAATGATGACTGTATGTaGAGGAAGATTTACACCCCACGCCAGAGTTGCGGT +
Preference number: 6 (lower is better)
Translates to: TVHLGTFNDDCM*RKIYTPRQSCG
Trigger: ACCGCAACTCTGGCGTGGGGTGTAAATCTTCCTGCACATACAGTCATCATTAAAGGTACCCAAGTGTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp CATCTTGCAGAGATTCAGGGTCTTATCTGTAAGCTGTaGCCAACCTCGGTTCAGGACAATTTCGAAGATTGC +
Preference number: 6 (lower is better)
Translates to: HLAEIQGLICKL*PTSVQDNFEDC
Trigger: GCAATCTTCGAAATTGTCCTGAACCGAGGTTGGGCACAGCTTACAGATAAGACCCTGAATCTCTGCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp AATGCCTCTGACGAACCATGGACCTTTTCATCCCACTaGAAATCTGGTGTGATAGTCAGCTCTACTTTCAGC +
Preference number: 6 (lower is better)
Translates to: NASDEPWTFSSH*KSGVIVSSTFS
Trigger: GCTGAAAGTAGAGCTGACTATCACACCAGATTTCCAGTGGGATGAAAAGGTCCATGGTTCGTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp AAGTGTCCTTCTCCAGACACATGTCACGGATTGCCCTaGCTGTCTTCCCAGTTTCTTTTCGAGAATGGACAA +
Preference number: 6 (lower is better)
Translates to: KCPSPDTCHGLP*LSSQFLFENGQ
Trigger: TTGTCCATTCTCGAAAAGAAACTGGGAAGACAGCAAGGGCAATCCGTGACATGTGTCTGGAGAAGGACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp CTGTATGTGCAGGAAGATTTACACCCCACGCCAGAGTaGCGGTGGAAACTAAAACCTGAATATGCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: LYVQEDLHPTPE*RWKLKPEYACQ
Trigger: CTGACAAGCATATTCAGGTTTTAGTTTCCACCGCAACTCTGGCGTGGGGTGTAAATCTTCCTGCACATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp AACCAAGGAGCAAAACCAGTTGGTTCTCACATTCTCGGTCATCACTaGCTGTCTTCAAAATCTCCAACACCTCATCTGCCTTCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: NQGAKPVGSHILGHH*LSSKSPTPHLPSSV
Trigger: CACAGAAGAAGGCAGATGAGGTGTTGGAGATTTTGAAGACAGCAAGTGATGACCGAGAATGTGAGAACCAACTGGTTTTGCTCCTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp GTGCAGGAAGATTTACACCCCACGCCAGAGTTGCGGTaGAAACTAAAACCTGAATATGCTTGTCAGCAAAAA +
Preference number: 6 (lower is better)
Translates to: VQEDLHPTPELR*KLKPEYACQQK
Trigger: TTTTTGCTGACAAGCATATTCAGGTTTTAGTTTCCACCGCAACTCTGGCGTGGGGTGTAAATCTTCCTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GCAAAACCAGTTGGTTCTCACATTCTCGGTCATCACTaGCTGTCTTCAAAATCTCCAACACCTCATCTGCCT +
Preference number: 6 (lower is better)
Translates to: AKPVGSHILGHH*LSSKSPTPHLP
Trigger: AGGCAGATGAGGTGTTGGAGATTTTGAAGACAGCAAGTGATGACCGAGAATGTGAGAACCAACTGGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp ATCATCATCCTGTGCTGCCGCAACACTTTAATGAAGTCAAACGTGTaGAAACCAAGGAGCAAAACCAGTTGGTTCTCACATTCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: IIILCCRNTLMKSNV*KPRSKTSWFSHSRS
Trigger: TGACCGAGAATGTGAGAACCAACTGGTTTTGCTCCTTGGTTTCAACACGTTTGACTTCATTAAAGTGTTGCGGCAGCACAGGATGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp CAAAACCAGTTGGTTCTCACATTCTCGGTCATCACTTaGTGTCTTCAAAATCTCCAACACCTCATCTGCCTT +
Preference number: 6 (lower is better)
Translates to: QNQLVLTFSVIT*CLQNLQHLICL
Trigger: AAGGCAGATGAGGTGTTGGAGATTTTGAAGACAGCAAGTGATGACCGAGAATGTGAGAACCAACTGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CCA 72 bp AAGTCAAACGTGTTGAAACCAAGGAGCAAAACCAGTTaGTTCTCACATTCTCGGTCATCACTTGCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: KSNVLKPRSKTS*FSHSRSSLAVF
Trigger: GAAGACAGCAAGTGATGACCGAGAATGTGAGAACCAACTGGTTTTGCTCCTTGGTTTCAACACGTTTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp GAAGTCAAACGTGTTGAAACCAAGGAGCAAAACCAGTaGGTTCTCACATTCTCGGTCATCACTTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: EVKRVETKEQNQ*VLTFSVITCCL
Trigger: AAGACAGCAAGTGATGACCGAGAATGTGAGAACCAACTGGTTTTGCTCCTTGGTTTCAACACGTTTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 72 bp ATCTTGAAGTCATCCACATTGATTGTGCCGTCCATGTaGATGTGTTTCCCTATCTCTCGGAGCATACACATC +
Preference number: 6 (lower is better)
Translates to: ILKSSTLIVPSM*MCFPISRSIHI
Trigger: GATGTGTATGCTCCGAGAGATAGGGAAACACATCAACATGGACGGCACAATCAATGTGGATGACTTCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS TCA 72 bp TCAGCATTGAAGTGGTCATGCATACAGTGGTCCAGGTaGGACTCTACTGGCAATGGCTCATACAAAAATTTT +
Preference number: 6 (lower is better)
Translates to: SALKWSCIQWSR*DSTGNGSYKNF
Trigger: AAAATTTTTGTATGAGCCATTGCCAGTAGAGTCTCACCTGGACCACTGTATGCATGACCACTTCAATGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS CAA 90 bp CACTTTAATGAAGTCAAACGTGTTGAAACCAAGGAGCAAAACCAGTaGGTTCTCACATTCTCGGTCATCACTTGCTGTCTTCAAAATCTC +
Preference number: 6 (lower is better)
Translates to: HFNEVKRVETKEQNQ*VLTFSVITCCLQNL
Trigger: GAGATTTTGAAGACAGCAAGTGATGACCGAGAATGTGAGAACCAACTGGTTTTGCTCCTTGGTTTCAACACGTTTGACTTCATTAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4
CDS GCA 72 bp GCCAACAAGGTACAGTATAAAATCATCATCCTGTGCTaGCGCAACACTTTAATGAAGTCAAACGTGTTGAAA +
Preference number: 6 (lower is better)
Translates to: ANKVQYKIIILC*RNTLMKSNVLK
Trigger: TTTCAACACGTTTGACTTCATTAAAGTGTTGCGGCAGCACAGGATGATGATTTTATACTGTACCTTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103220.4