Pregenerated sensors for SNIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050213Ensembl transcript IDs: ENSMUST00000052183.7
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCAGCAACAGAGAAAAGACTTAAGGCAAGAAGAGGCGCTGGAGTaGCCACCACAGCCTCCGGTAGGGACGGTTTCTAACAGTAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: GQQQRKDLRQEEALE*PPQPPVGTVSNSRG Trigger: GCCTCTACTGTTAGAAACCGTCCCTACCGGAGGCTGTGGTGGTCACTCCAGCGCCTCTTCTTGCCTTAAGTCTTTTCTCTGTTGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR GCA 90 bp | ACTGTACAAAGAGAAGAAGCCACCATCCCCTTTCCAAGGGCAGTTTaGTATGCAGCAGTTCTGAAGGTGCCCACCACACGCTCTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: TVQREEATIPFPRAV*YAAVLKVPTTRSDQ Trigger: CTGGTCAGAGCGTGTGGTGGGCACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCTTCTCTTTGTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 90 bp | AATCAGGAATCCTCAGGGTGCAGATCTACAGACCAGTGCACAGTATaGCAGCAGCTCCTGTTGGTAGAAGCCACGACCTCCCTACAGTCT | + |
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Preference number: 1 (lower is better) Translates to: NQESSGCRSTDQCTV*QQLLLVEATTSLQS Trigger: AGACTGTAGGGAGGTCGTGGCTTCTACCAACAGGAGCTGCTGTCATACTGTGCACTGGTCTGTAGATCTGCACCCTGAGGATTCCTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CCA 90 bp | CAGGTGGGAAGTTCAGACACTCGGCTGTCTCTTACTTTCCACCCGTaGGAGGAAAATATGAACACATGGTCAAAGATGAACTGGAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: QVGSSDTRLSLTFHP*EENMNTWSKMNWKC Trigger: ACACTTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTAAGAGACAGCCGAGTGTCTGAACTTCCCACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 90 bp | GCTGAATCAGGTCAAAGCTTTGGTATAGGCTGGAGGCTGTTTTGGTaGCAACCAAAGCTGACTAAGATTCTCTACTCTAGGATTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: AESGQSFGIGWRLFW*QPKLTKILYSRICP Trigger: GGGACAAATCCTAGAGTAGAGAATCTTAGTCAGCTTTGGTTGTCACCAAAACAGCCTCCAGCCTATACCAAAGCTTTGACCTGATTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CCA 90 bp | TTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAACTaGAAGTGTGGAAGCTACACAACCTCGTTTAGACACATACACACA | + |
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Preference number: 1 (lower is better) Translates to: FHPWEENMNTWSKMN*KCGSYTTSFRHIHT Trigger: TGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACACTTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CCA 90 bp | ATGAAAACCTGCTCTCCAAATGCAGACAGGCCTTTGCCTATCATGTaGTATTATTTATATCGCAAAACACTGACATATGAAACCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: MKTCSPNADRPLPIM*YYLYRKTLTYETQH Trigger: GTGCTGGGTTTCATATGTCAGTGTTTTGCGATATAAATAATACCACATGATAGGCAAAGGCCTGTCTGCATTTGGAGAGCAGGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 90 bp | TTTGCCTATCATGTGGTATTATTTATATCGCAAAACACTGACATATaGAACCCAGCACATAGCTCTGAAGCACACAGACTGTCAGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: FAYHVVLFISQNTDI*NPAHSSEAHRLSVR Trigger: CCTTACTGACAGTCTGTGTGCTTCAGAGCTATGTGCTGGGTTTCATATGTCAGTGTTTTGCGATATAAATAATACCACATGATAGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCTCTTACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAAGAGGCGCTGGAGTaGCCACCACAGCCTCCGGTA | + |
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Preference number: 2 (lower is better) Translates to: AVSYFPPVGGKYEHMVKDEEALE*PPQPPV Trigger: TACCGGAGGCTGTGGTGGTCACTCCAGCGCCTCTTC...ATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTAAGAGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR TCA 90 bp | TACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAACTGGAAGCTATGCAGCAGTTCTaGAGGTGCCCACCACACGCT | + |
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Preference number: 2 (lower is better) Translates to: YFPPVGGKYEHMVKDELEAMQQF*RCPPHA Trigger: AGCGTGTGGTGGGCACCTTCAGAACTGCTGCATAGC...TTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGAATCAGGTCAAAGCTTTaGTATAGGCTGGAGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRIRSKL*YRLEAV Trigger: AACAGCCTCCAGCCTATACCAAAGCTTTGACCTGAT...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR TCA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGAGGTGACAACCAAAGCTaGCTAAGATTCTCTACTCTA | + |
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Preference number: 2 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRGDNQS*LRFSTL Trigger: TAGAGTAGAGAATCTTAGTCAGCTTTGGTTGTCACC...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR CCA 90 bp | GTACAAAGAGAAGAAGCCACCATCCCCTTTCCAAGGGCAGTTTGCTATGCAGCATACTGCAACATAGGCTaGGCAGCAACAGAGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VQREEATIPFPRAVCYAAYCNIG*AATEKR Trigger: TCTTTTCTCTGTTGCTGCCCAGCCTATGTTGCAGTA...TGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCTTCTCTTTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCACCATCCCCTTTCCAAGGGCAGTTTGCTATGCAGCAGTTCTGAAGGTACATGCTGTAATTGGTaGGACTGTTCAGAAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: RSHHPLSKGSLLCSSSEGTCCNW*DCSENK Trigger: CTTGTTTTCTGAACAGTCTCACCAATTACAGCATGT...ACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR TCA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGAATGATGTCTGCTTCATaGAGAAATCAGGAATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRMMSAS*RNQESS Trigger: TGAGGATTCCTGATTTCTTCATGAAGCAGACATCAT...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCTCTTACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATCCACAAGCAGGCAGCTaGTGTGCCAACTTCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AVSYFPPVGGKYEHMVKDPQAGS*CANFKK Trigger: TTTCTTGAAGTTGGCACAGCAGCTGCCTGCTTGTGG...ATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTAAGAGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACAGCCAAGAAAACATGAAGTaGCAGTTCTCATACTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: CGSYTTSFRHIHTSLGHSQENMK*QFSYCN Trigger: GTTGCAGTATGAGAACTGTCACTTCATGTTTTCTTG...GCTGTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACCCTACAAAGTCAGTGTaGTGTTTCTCAAAGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: KCGSYTTSFRHIHTSLGHPTKSV*CFSKGE Trigger: TTCTCCCTTTGAGAAACACCACACTGACTTTGTAGG...GTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 72 bp | TCCCCTTTCCAAGGGCAGTTTGCTATGCAGCAGTTCTaGAGGTGCCCACCACACGCTCTGACCAGACTCGAC | + |
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Preference number: 3 (lower is better) Translates to: SPFQGQFAMQQF*RCPPHALTRLD Trigger: GTCGAGTCTGGTCAGAGCGTGTGGTGGGCACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR GCA 72 bp | AGAGAAGAAGCCACCATCCCCTTTCCAAGGGCAGTTTaGTATGCAGCAGTTCTGAAGGTGCCCACCACACGC | + |
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Preference number: 3 (lower is better) Translates to: REEATIPFPRAV*YAAVLKVPTTR Trigger: GCGTGTGGTGGGCACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 72 bp | CAGAGAAAAGACTTAAGGCAAGAAGAGGCGCTGGAGTaGCCACCACAGCCTCCGGTAGGGACGGTTTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: QRKDLRQEEALE*PPQPPVGTVSN Trigger: GTTAGAAACCGTCCCTACCGGAGGCTGTGGTGGTCACTCCAGCGCCTCTTCTTGCCTTAAGTCTTTTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CCA 72 bp | CTAGGCCACAGCAAGGCCCCTCCTACAAAGTCAGTGTaGTGTTTCTCAAAGGGAGAAGAGAGGCGACATTTG | + |
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Preference number: 3 (lower is better) Translates to: LGHSKAPPTKSV*CFSKGEERRHL Trigger: CAAATGTCGCCTCTCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGGCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR-3UTR CAA 90 bp | TGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACAGCCTTTCCAAGGGCAGTTaGCTATGCAGCAGTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: CGSYTTSFRHIHTSLGHSLSKGS*LCSSSE Trigger: TTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAG...GCTGTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CCA 72 bp | TCAGTAAGGAGTATCTTTCTACTCACAGATCCCAGGTaGGAAGTTCAGACACTCGGCTGTCTCTTACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SVRSIFLLTDPR*EVQTLGCLLLS Trigger: GGAAAGTAAGAGACAGCCGAGTGTCTGAACTTCCCACCTGGGATCTGTGAGTAGAAAGATACTCCTTACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 72 bp | GGTCAAAGCTTTGGTATAGGCTGGAGGCTGTTTTGGTaGCAACCAAAGCTGACTAAGATTCTCTACTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: GQSFGIGWRLFW*QPKLTKILYSR Trigger: CCTAGAGTAGAGAATCTTAGTCAGCTTTGGTTGTCACCAAAACAGCCTCCAGCCTATACCAAAGCTTTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CCA 72 bp | AGTTCAGACACTCGGCTGTCTCTTACTTTCCACCCGTaGGAGGAAAATATGAACACATGGTCAAAGATGAAC | + |
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Preference number: 3 (lower is better) Translates to: SSDTRLSLTFHP*EENMNTWSKMN Trigger: GTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTAAGAGACAGCCGAGTGTCTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CCA 72 bp | TGGGAGGAAAATATGAACACATGGTCAAAGATGAACTaGAAGTGTGGAAGCTACACAACCTCGTTTAGACAC | + |
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Preference number: 3 (lower is better) Translates to: WEENMNTWSKMN*KCGSYTTSFRH Trigger: GTGTCTAAACGAGGTTGTGTAGCTTCCACACTTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 72 bp | AAAAGACCAGATGATCAAACTATGATGTCTGCTTCATaGAGAAATCAGGAATCCTCAGGGTGCAGATCTACA | + |
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Preference number: 3 (lower is better) Translates to: KRPDDQTMMSAS*RNQESSGCRST Trigger: TGTAGATCTGCACCCTGAGGATTCCTGATTTCTTCATGAAGCAGACATCATAGTTTGATCATCTGGTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR TCA 72 bp | CATGTGGTATTATTTATATCGCAAAACACTGACATATaGAACCCAGCACATAGCTCTGAAGCACACAGACTG | + |
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Preference number: 3 (lower is better) Translates to: HVVLFISQNTDI*NPAHSSEAHRL Trigger: CAGTCTGTGTGCTTCAGAGCTATGTGCTGGGTTTCATATGTCAGTGTTTTGCGATATAAATAATACCACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR GCA 90 bp | TGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACAGCCGGGAATGGCCCCGGTaGCGGTCTCGCTCACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CGSYTTSFRHIHTSLGHSREWPR*RSRSLF Trigger: GAACAGTGAGCGAGACCGGCACCGGGGCCATTCCCG...GCTGTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR TCA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGACGAGGGATCACCTCCTaGGCCTCACTGCCAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRRGITS*ASLPAL Trigger: AAGTGCTGGCAGTGAGGCTCAGGAGGTGATCCCTCG...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR GCA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGATCTGATGGTTCCCGGTaGTGCCGATCCTCTCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRSDGSR*CRSSRP Trigger: AGGACGAGAGGATCGGCAGCACCGGGAACCATCAGA...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR GCA 90 bp | GAAATCAGGAATCCTCAGGGTGCAGATCTACAGACCAGTGCACAGTATGACAGCTCATTCTGCTGGCGGTaGTCCCGGCGCCTGGCATTA | + |
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Preference number: 4 (lower is better) Translates to: EIRNPQGADLQTSAQYDSSFCWR*SRRLAL Trigger: TAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGA...GCTGTCATACTGTGCACTGGTCTGTAGATCTGCACCCTGAGGATTCCTGATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CCA 90 bp | AGAAGCCACCATCCCCTTTCCAAGGGCAGTTTGCTATGCAGCAGTTCTGAAGGTACTTGCTTTTCTTCTTaGCTGGGGACCGGGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: RSHHPLSKGSLLCSSSEGTCFSS*LGTGLG Trigger: GCCGAGCCCGGTCCCCAGCCAAGAAGAAAAGCAAGT...ACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| 3UTR CAA 72 bp | AAGAGAAGAAGCCACCATCCCCTTTCCAAGGGCAGTTaGCTATGCAGCAGTTCTGAAGGTGCCCACCACACG | + |
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Preference number: 4 (lower is better) Translates to: KRRSHHPLSKGS*LCSSSEGAHHT Trigger: CGTGTGGTGGGCACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCTTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CCA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGACACCCCGGAAGGTATTaGTGTCCTCAAGAAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRHPGRY*CPQEVP Trigger: GGGCACTTCTTGAGGACACCAATACCTTCCGGGGTG...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CCA 90 bp | GAAATCAGGAATCCTCAGGGTGCAGATCTACAGACCAGTGCACAGTATGACAGCAAGAGGGATGGTCGATaGGAATGTCTGCGATGCGTC | + |
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Preference number: 4 (lower is better) Translates to: EIRNPQGADLQTSAQYDSKRDGR*ECLRCV Trigger: GACGCATCGCAGACATTCCCATCGACCATCCCTCTT...GCTGTCATACTGTGCACTGGTCTGTAGATCTGCACCCTGAGGATTCCTGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR GCA 90 bp | AAGTGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACCCTCCTGAGCCTCACTaGCAGCACTTTCATTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: KCGSYTTSFRHIHTSLGHPPEPH*QHFHSA Trigger: AGCAGAATGAAAGTGCTGGCAGTGAGGCTCAGGAGG...GTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CCA 90 bp | AAACATGAAGTGACAGTTCTCATACTGCAACATAGGCTGGGCAGCAACAGAGAATGGGCCTGCAGGTTCTaGCTGTCTCTATCCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: KHEVTVLILQHRLGSNREWACRF*LSLSRS Trigger: GGATCGGGATAGAGACAGCCAGAACCTGCAGGCCCA...TTCTCTGTTGCTGCCCAGCCTATGTTGCAGTATGAGAACTGTCACTTCATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR GCA 90 bp | GAAATCAGGAATCCTCAGGGTGCAGATCTACAGACCAGTGCACAGTATGACAGCTGGAAGACTGCATGTTaGTTTGAGCAAGAGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: EIRNPQGADLQTSAQYDSWKTAC*FEQEGW Trigger: CCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCA...GCTGTCATACTGTGCACTGGTCTGTAGATCTGCACCCTGAGGATTCCTGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CCA 90 bp | TACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAACTGGAACGTCCTCTCCGAGGATaGTCCTCACGTTCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: YFPPVGGKYEHMVKDELERPLRG*SSRSCF Trigger: GAAGCAGGAACGTGAGGACCATCCTCGGAGAGGACG...TTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR GCA 90 bp | AAACATGAAGTGACAGTTCTCATACTGCAACATAGGCTGGGCAGCAACAGAGAATCTTCTTCCTGGGCCTaGAGGTTCTGGCTGTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: KHEVTVLILQHRLGSNRESSSWA*RFWLSL Trigger: TAGAGACAGCCAGAACCTGCAGGCCCAGGAAGAAGA...TTCTCTGTTGCTGCCCAGCCTATGTTGCAGTATGAGAACTGTCACTTCATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR GCA 90 bp | GTACAAAGAGAAGAAGCCACCATCCCCTTTCCAAGGGCAGTTTGCTATGCAGCAAGAAGGTATGCACTCTaGCGATGGATGTACATGACT | + |
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Preference number: 4 (lower is better) Translates to: VQREEATIPFPRAVCYAARRYAL*RWMYMT Trigger: AGTCATGTACATCCATCGGCAGAGTGCATACCTTCT...TGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCTTCTCTTTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CCA 90 bp | TGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACAGCTATGCACTCTGCCGATaGATGTACATGACTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: CGSYTTSFRHIHTSLGHSYALCR*MYMTGS Trigger: ACTTCCAGTCATGTACATCCATCGGCAGAGTGCATA...GCTGTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR TCA 90 bp | TATATAAATAGGAAACTGTACAAAGAGAAGAAGCCACCATCCCCTTTCCAAGGGGTTCCTGCTTCACTTTaGCCATGGGGTAGTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: YINRKLYKEKKPPSPFQGVPASL*PWGSGD Trigger: GTCCCCACTACCCCATGGTCAAAGTGAAGCAGGAAC...CCCTTGGAAAGGGGATGGTGGCTTCTTCTCTTTGTACAGTTTCCTATTTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR TCA 90 bp | AAGTGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACGAATGTTCCATTGCCTaGGCCAAGGTCGATAATGTA | + |
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Preference number: 4 (lower is better) Translates to: KCGSYTTSFRHIHTSLGHECSIA*AKVDNV Trigger: TACATTATCGACCTTGGCTCAGGCAATGGAACATTC...GTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR TCA 90 bp | AAGTGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACAAGTTCAGAGGTGTCTaGAGACTCATGAAGCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KCGSYTTSFRHIHTSLGHKFRGV*RLMKQD Trigger: GTCTTGCTTCATGAGTCTTCAGACACCTCTGAACTT...GTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR TCA 90 bp | AAAATCAACTTCTATGACTCAAGAGCTGAATCAGGTCAAAGCTTTGGTATAGGCCGGCGCCTGGCATTATaGAAGTCCCTCTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KINFYDSRAESGQSFGIGRRLAL*KSLSSS Trigger: GGAAGAAGAGAGGGACTTTCATAATGCCAGGCGCCG...GCCTATACCAAAGCTTTGACCTGATTCAGCTCTTGAGTCATAGAAGTTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR GCA 90 bp | TACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAACTGGAATTCTCCCAGAGGACTTaGTTTTCTTCTTGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YFPPVGGKYEHMVKDELEFSQRT*FSSWLG Trigger: CCCCAGCCAAGAAGAAAAGCAAGTCCTCTGGGAGAA...TTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR TCA 90 bp | TACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAACTGGAAGCCGATGGATGTACATaGCTGGAAGTACCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: YFPPVGGKYEHMVKDELEADGCT*LEVPHH Trigger: ATGATGAGGTACTTCCAGTCATGTACATCCATCGGC...TTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR CCA 90 bp | TACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAACTGGAAAGAAAGTTCAAAGCTTaGTTTCTCTTTAACGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YFPPVGGKYEHMVKDELERKFKA*FLFNGH Trigger: GTGCCCGTTAAAGAGAAACCAAGCTTTGAACTTTCT...TTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR CCA 90 bp | AAACATGAAGTGACAGTTCTCATACTGCAACATAGGCTGGGCAGCAACAGAGAAATGGATGTACATGACTaGAAGTACCTCATCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHEVTVLILQHRLGSNREMDVHD*KYLIIF Trigger: AAAAATGATGAGGTACTTCCAGTCATGTACATCCAT...TTCTCTGTTGCTGCCCAGCCTATGTTGCAGTATGAGAACTGTCACTTCATGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 90 bp | TGTCCACTGACGGGCCTCTCATCAGAGCTCCTCCCTTGGCGGGAATaGCCCCGGTGCCGGTCTCGCTCACTGTTCCGAGCTCTCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPLTGLSSELLPWRE*PRCRSRSLFRALLC Trigger: GCACAGGAGAGCTCGGAACAGTGAGCGAGACCGGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS TCA 90 bp | CCTGGGCCTGCAGGTTCTGGCTGTCTCTATCCCGATCCTGTCCACTaGCGGGCCTCTCATCAGAGCTCCTCCCTTGGCGGGAATGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGPAGSGCLYPDPVH*RASHQSSSLGGNGP Trigger: GGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACAGGATCGGGATAGAGACAGCCAGAACCTGCAGGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 90 bp | ACGGGCCTCTCATCAGAGCTCCTCCCTTGGCGGGAATGGCCCCGGTaGCGGTCTCGCTCACTGTTCCGAGCTCTCCTGTGCTCCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGLSSELLPWREWPR*RSRSLFRALLCSCS Trigger: AGAACAGGAGCACAGGAGAGCTCGGAACAGTGAGCGAGACCGGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 90 bp | GAATGGCCCCGGTGCCGGTCTCGCTCACTGTTCCGAGCTCTCCTGTaGTCCTGTTCTGATGGTTCCCGGTGCTGCCGATCCTCTCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EWPRCRSRSLFRALL*SCSDGSRCCRSSRP Trigger: AGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAGTGAGCGAGACCGGCACCGGGGCCATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 90 bp | CTGTTCCGAGCTCTCCTGTGCTCCTGTTCTGATGGTTCCCGGTGCTaGCGATCCTCTCGTCCTCTCCGAGGATGGTCCTCACGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFRALLCSCSDGSRC*RSSRPLRGWSSRSC Trigger: GCAGGAACGTGAGGACCATCCTCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 90 bp | TCACTGTTCCGAGCTCTCCTGTGCTCCTGTTCTGATGGTTCCCGGTaGTGCCGATCCTCTCGTCCTCTCCGAGGATGGTCCTCACGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLFRALLCSCSDGSR*CRSSRPLRGWSSRS Trigger: GGAACGTGAGGACCATCCTCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS TCA 90 bp | CCAGCACTTTCATTCTGCTGGCGGTGCTCCCGGCGCCTGGCATTATaGAAGTCCCTCTCTTCTTCCTGGGCCTGCAGGTTCTGGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PALSFCWRCSRRLAL*KSLSSSWACRFWLS Trigger: AGACAGCCAGAACCTGCAGGCCCAGGAAGAAGAGAGGGACTTTCATAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGAAAGTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 90 bp | CCTCACTGCCAGCACTTTCATTCTGCTGGCGGTGCTCCCGGCGCCTaGCATTATGAAAGTCCCTCTCTTCTTCCTGGGCCTGCAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PHCQHFHSAGGAPGA*HYESPSLLPGPAGS Trigger: AGAACCTGCAGGCCCAGGAAGAAGAGAGGGACTTTCATAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGAAAGTGCTGGCAGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 90 bp | CGACCAACCGTGCCGTCAGCACGGGTGTACTCCACAAGCCGGTACTaGAAGACTGCATGTTGCTTTGAGCAAGAGGGATGGTCGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPTVPSARVYSTSRY*KTACCFEQEGWSMG Trigger: TCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGTACACCCGTGCTGACGGCACGGTTGGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCACCATCCCCTTTCCAAGGGCAGTTTGCTATGCAGCAGTTCTGAAGGTAGGCGCCACCGTTTTTaGGGGATCCGGGCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSHHPLSKGSLLCSSSEGRRHRF*GIRASG Trigger: CCCAGAAGCCCGGATCCCCAAAAAACGGTGGCGCCT...ACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS TCA 90 bp | ACGGGTGTACTCCACAAGCCGGTACTGGAAGACTGCATGTTGCTTTaGGCAAGAGGGATGGTCGATGGGAATGTCTGCGATGCGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGVLHKPVLEDCMLL*ARGMVDGNVCDASM Trigger: CATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGTACACCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 90 bp | TCAGCACGGGTGTACTCCACAAGCCGGTACTGGAAGACTGCATGTTaGTTTGAGCAAGAGGGATGGTCGATGGGAATGTCTGCGATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SARVYSTSRYWKTAC*FEQEGWSMGMSAMR Trigger: ACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGTACACCCGTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 90 bp | ACAAGCCGGTACTGGAAGACTGCATGTTGCTTTGAGCAAGAGGGATaGTCGATGGGAATGTCTGCGATGCGTCGATGTCTACCCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRYWKTACCFEQEG*SMGMSAMRRCLPRR Trigger: CCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR CAA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGAGGACTCTGGCTTCTCTaGGTCCGTGGTGACTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRGLWLL*VRGDLL Trigger: AAGCAAGTCACCACGGACCAAGAGAAGCCAGAGTCC...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 90 bp | CATGTTGCTTTGAGCAAGAGGGATGGTCGATGGGAATGTCTGCGATaGGTCGATGTCTACCCAGAAGGTATGCACTCTGCCGATGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: HVALSKRDGRWECLR*VDVYPEGMHSADGC Trigger: ACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 90 bp | GGTACTGGAAGACTGCATGTTGCTTTGAGCAAGAGGGATGGTCGATaGGAATGTCTGCGATGCGTCGATGTCTACCCAGAAGGTATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTGRLHVALSKRDGR*ECLRCVDVYPEGMH Trigger: GTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR CAA 90 bp | AAGTGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACACACCCCGGAAGGTATaGGTGTCCTCAAGAAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KCGSYTTSFRHIHTSLGHTPRKV*VSSRSA Trigger: GGCACTTCTTGAGGACACCAATACCTTCCGGGGTGT...GTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS TCA 90 bp | TCTCTGTGGCTCAATACGCTTGTTGTTCAAGAATGTTCCATTGCCTaGGCCAAGGTCGATAATGTAGGGCTTCACCCTCCGACCAACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLWLNTLVVQECSIA*AKVDNVGLHPPTNR Trigger: ACGGTTGGTCGGAGGGTGAAGCCCTACATTATCGACCTTGGCTCAGGCAATGGAACATTCTTGAACAACAAGCGTATTGAGCCACAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 90 bp | GTCGATGGGAATGTCTGCGATGCGTCGATGTCTACCCAGAAGGTATaGACTCTGCCGATGGATGTACATGACTGGAAGTACCTCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: VDGNVCDASMSTQKV*TLPMDVHDWKYLII Trigger: AATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CAA 90 bp | TACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGAACTGGAAGACTTGCTTTTCTTCTaGGCTGGGGACCGGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YFPPVGGKYEHMVKDELEDLLFF*AGDRAR Trigger: CCGAGCCCGGTCCCCAGCCAAGAAGAAAAGCAAGTC...TTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CAA 90 bp | CCACAGCAAGGCCCCTCCTACAAAGTCAGTGTGGTGTTTCTCAAAGGGAGAAGATTCAAGAATGTTCCATaGCCTGAGCCAAGGTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: PQQGPSYKVSVVFLKGRRFKNVP*PEPRSI Trigger: TATCGACCTTGGCTCAGGCAATGGAACATTCTTGAA...TCTTCTCCCTTTGAGAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS CCA 90 bp | ATGTCTACCCAGAAGGTATGCACTCTGCCGATGGATGTACATGACTaGAAGTACCTCATCATTTTTAAAGGGGTAGAGGCGCCACCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MSTQKVCTLPMDVHD*KYLIIFKGVEAPPF Trigger: AAACGGTGGCGCCTCTACCCCTTTAAAAATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS GCA 90 bp | GGAATGTCTGCGATGCGTCGATGTCTACCCAGAAGGTATGCACTCTaGCGATGGATGTACATGACTGGAAGTACCTCATCATTTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GMSAMRRCLPRRYAL*RWMYMTGSTSSFLK Trigger: CTTTAAAAATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CAA 90 bp | TGTGGAAGCTACACAACCTCGTTTAGACACATACACACATCCCTAGGCCACAGCTGTGGCTCAATACGCTaGTTGTTCAAGAATGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGSYTTSFRHIHTSLGHSCGSIR*LFKNVP Trigger: TGGAACATTCTTGAACAACAAGCGTATTGAGCCACA...GCTGTGGCCTAGGGATGTGTGTATGTGTCTAAACGAGGTTGTGTAGCTTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CAA 90 bp | TATATAAATAGGAAACTGTACAAAGAGAAGAAGCCACCATCCCCTTTCCAAGGGCTTCTCCCAGAGGACTaGCTTTTCTTCTTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YINRKLYKEKKPPSPFQGLLPED*LFFLAG Trigger: CCCAGCCAAGAAGAAAAGCAAGTCCTCTGGGAGAAG...CCCTTGGAAAGGGGATGGTGGCTTCTTCTCTTTGTACAGTTTCCTATTTATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS-3UTR CAA 90 bp | AAAATCAACTTCTATGACTCAAGAGCTGAATCAGGTCAAAGCTTTGGTATAGGCTTAACGGGCACCTCTTaGCTTCTGTTCCCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KINFYDSRAESGQSFGIGLTGTS*LLFPAG Trigger: TCCTGCTGGGAACAGAAGCAAAGAGGTGCCCGTTAA...GCCTATACCAAAGCTTTGACCTGATTCAGCTCTTGAGTCATAGAAGTTGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS TCA 90 bp | CTCCTCATCATCTTCATCTTCCTTCCTGTCAAGTTCAGAGGTGTCTaGAGACTCATGAAGCAAGACATATTCTCTGCTACTGAACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLIIFIFLPVKFRGV*RLMKQDIFSATEPK Trigger: TTTGGGTTCAGTAGCAGAGAATATGTCTTGCTTCATGAGTCTTCAGACACCTCTGAACTTGACAGGAAGGAAGATGAAGATGATGAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTCTTACTTTCCACCCGTGGGAGGAAAATATGAACACATGGTCAAAGATGGCTCAATACGCTTGTaGTTCAAGAATGTTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: AVSYFPPVGGKYEHMVKDGSIRL*FKNVPL Trigger: CAATGGAACATTCTTGAACAACAAGCGTATTGAGCC...ATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTAAGAGACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS TCA 72 bp | TTCTTCTTGGCTGGGGACCGGGCTCGGCTCCCGCGGTaGCCCGAGTGGCCAGGCTCGGCGGCGGGCGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FFLAGDRARLPR*PEWPGSAAGGD Trigger: GTCCCCGCCCGCCGCCGAGCCTGGCCACTCGGGTCACCGCGGGAGCCGAGCCCGGTCCCCAGCCAAGAAGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS TCA 72 bp | CTCCTGTTTCACCACCACGGTCGTCAGAGCGTCGCCTaGCCGGTGTCGCCGCCGGCCGCTCCGCTCCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLFHHHGRQSVA*PVSPPAAPLPL Trigger: GAGCGGGAGCGGAGCGGCCGGCGGCGACACCGGTCAGGCGACGCTCTGACGACCGTGGTGGTGAAACAGGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CAA 72 bp | CTGTCCACTGACGGGCCTCTCATCAGAGCTCCTCCCTaGGCGGGAATGGCCCCGGTGCCGGTCTCGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LSTDGPLIRAPP*AGMAPVPVSLT Trigger: AGTGAGCGAGACCGGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CAA 90 bp | ATCCCGATCCTGTCCACTGACGGGCCTCTCATCAGAGCTCCTCCCTaGGCGGGAATGGCCCCGGTGCCGGTCTCGCTCACTGTTCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IPILSTDGPLIRAPP*AGMAPVPVSLTVPS Trigger: GCTCGGAACAGTGAGCGAGACCGGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACAGGATCGGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 72 bp | TCATCAGAGCTCCTCCCTTGGCGGGAATGGCCCCGGTaGCGGTCTCGCTCACTGTTCCGAGCTCTCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSELLPWREWPR*RSRSLFRALLC Trigger: GCACAGGAGAGCTCGGAACAGTGAGCGAGACCGGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 72 bp | CGGTGCCGGTCTCGCTCACTGTTCCGAGCTCTCCTGTaGTCCTGTTCTGATGGTTCCCGGTGCTGCCGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RCRSRSLFRALL*SCSDGSRCCRS Trigger: GGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAGTGAGCGAGACCGGCACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 72 bp | TCCCAGCAGGACGAGGGATCACCTCCTGAGCCTCACTaGCAGCACTTTCATTCTGCTGGCGGTGCTCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SQQDEGSPPEPH*QHFHSAGGAPG Trigger: GCCGGGAGCACCGCCAGCAGAATGAAAGTGCTGGCAGTGAGGCTCAGGAGGTGATCCCTCGTCCTGCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 72 bp | CGAGCTCTCCTGTGCTCCTGTTCTGATGGTTCCCGGTaGTGCCGATCCTCTCGTCCTCTCCGAGGATGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RALLCSCSDGSR*CRSSRPLRGWS Trigger: GGACCATCCTCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 72 bp | GCTCTCCTGTGCTCCTGTTCTGATGGTTCCCGGTGCTaGCGATCCTCTCGTCCTCTCCGAGGATGGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLCSCSDGSRC*RSSRPLRGWSS Trigger: TGAGGACCATCCTCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 72 bp | TCCCGGTGCTGCCGATCCTCTCGTCCTCTCCGAGGATaGTCCTCACGTTCCTGCTTCACTTTGACCATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRCCRSSRPLRG*SSRSCFTLTMG Trigger: CCCCATGGTCAAAGTGAAGCAGGAACGTGAGGACCATCCTCGGAGAGGACGAGAGGATCGGCAGCACCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 72 bp | CAGCACTTTCATTCTGCTGGCGGTGCTCCCGGCGCCTaGCATTATGAAAGTCCCTCTCTTCTTCCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QHFHSAGGAPGA*HYESPSLLPGP Trigger: AGGCCCAGGAAGAAGAGAGGGACTTTCATAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGAAAGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CAA 72 bp | TTGGTCCGTGGTGACTTGCTTCTTCTCCCAGAGGACTaGCTTTTCTTCTTGGCTGGGGACCGGGCTCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVRGDLLLLPED*LFFLAGDRARL Trigger: GAGCCGAGCCCGGTCCCCAGCCAAGAAGAAAAGCAAGTCCTCTGGGAGAAGAAGCAAGTCACCACGGACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CCA 72 bp | GTGCCGTCAGCACGGGTGTACTCCACAAGCCGGTACTaGAAGACTGCATGTTGCTTTGAGCAAGAGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: VPSARVYSTSRY*KTACCFEQEGW Trigger: CCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGTACACCCGTGCTGACGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS CAA 90 bp | CACGGGTGTACTCCACAAGCCGGTACTGGAAGACTGCATGTTGCTTaGAGCAAGAGGGATGGTCGATGGGAATGTCTGCGATGCGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: HGCTPQAGTGRLHVA*SKRDGRWECLRCVD Trigger: ATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGTACACCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
||
| CDS GCA 72 bp | TTGAGCAAGAGGGATGGTCGATGGGAATGTCTGCGATaGGTCGATGTCTACCCAGAAGGTATGCACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LSKRDGRWECLR*VDVYPEGMHSA Trigger: GGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS TCA 72 bp | CTCCACAAGCCGGTACTGGAAGACTGCATGTTGCTTTaGGCAAGAGGGATGGTCGATGGGAATGTCTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: LHKPVLEDCMLL*ARGMVDGNVCD Trigger: ATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS GCA 72 bp | AGTGGGGACTCTGGCTTCTCTTGGTCCGTGGTGACTTaGTTCTTCTCCCAGAGGACTTGCTTTTCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGDSGFSWSVVT*FFSQRTCFSSW Trigger: CCAAGAAGAAAAGCAAGTCCTCTGGGAGAAGAAGCAAGTCACCACGGACCAAGAGAAGCCAGAGTCCCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS CAA 72 bp | ACTCCACAAGCCGGTACTGGAAGACTGCATGTTGCTTaGAGCAAGAGGGATGGTCGATGGGAATGTCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: TPQAGTGRLHVA*SKRDGRWECLR Trigger: TCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS GCA 72 bp | GCGATGCGTCGATGTCTACCCAGAAGGTATGCACTCTaGCGATGGATGTACATGACTGGAAGTACCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: AMRRCLPRRYAL*RWMYMTGSTSS Trigger: TGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS CCA 72 bp | AGACTGCATGTTGCTTTGAGCAAGAGGGATGGTCGATaGGAATGTCTGCGATGCGTCGATGTCTACCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RLHVALSKRDGR*ECLRCVDVYPE Trigger: TTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS GCA 72 bp | AATGTCTGCGATGCGTCGATGTCTACCCAGAAGGTATaGACTCTGCCGATGGATGTACATGACTGGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: NVCDASMSTQKV*TLPMDVHDWKY Trigger: GTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS CCA 72 bp | TACTGGAAGACTGCATGTTGCTTTGAGCAAGAGGGATaGTCGATGGGAATGTCTGCGATGCGTCGATGTCTA | + |
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Preference number: 6 (lower is better) Translates to: YWKTACCFEQEG*SMGMSAMRRCL Trigger: TAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS TCA 72 bp | CTCAATACGCTTGTTGTTCAAGAATGTTCCATTGCCTaGGCCAAGGTCGATAATGTAGGGCTTCACCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LNTLVVQECSIA*AKVDNVGLHPP Trigger: CGGAGGGTGAAGCCCTACATTATCGACCTTGGCTCAGGCAATGGAACATTCTTGAACAACAAGCGTATTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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| CDS CCA 72 bp | CGTCGATGTCTACCCAGAAGGTATGCACTCTGCCGATaGATGTACATGACTGGAAGTACCTCATCATTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RRCLPRRYALCR*MYMTGSTSSFL Trigger: TAAAAATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052183.7 |
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