Pregenerated sensors for SNAPC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028483Ensembl transcript IDs: ENSMUST00000030206.10, ENSMUST00000071544.11, ENSMUST00000123262.8, ENSMUST00000124856.8, ENSMUST00000137512.8, ENSMUST00000143533.8
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGCCGACTTGTAGAGGTCTTTGCTGATGTGCTCAGGGGCTTGGTCTaGCGCGTTGCTGAATTCTCCACCGATCTGGAGGTCACTGACACA | + |
Preference number: 1 (lower is better) Translates to: SRLVEVFADVLRGLV*RVAEFSTDLEVTDT Trigger: TGTGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATCAGCAAAGACCTCTACAAGTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR CCA 90 bp | TGCTCAGGGGCTTGGTCTGGCGCGTTGCTGAATTCTCCACCGATCTaGAGGTCACTGACACAGCAAATTGAATCTCTCAGTTCTGTGAGC | + |
Preference number: 1 (lower is better) Translates to: CSGAWSGALLNSPPI*RSLTQQIESLSSVS Trigger: GCTCACAGAACTGAGAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR CCA 90 bp | AAGACATGGAAAATTACAGAGAAGGTTAATGGGAGCTGGCTGAGATaGCACATACCTGGAATCCCGGCACTTATGGAGGCACAGCCGGGA | + |
Preference number: 1 (lower is better) Translates to: KTWKITEKVNGSWLR*HIPGIPALMEAQPG Trigger: TCCCGGCTGTGCCTCCATAAGTGCCGGGATTCCAGGTATGTGCCATCTCAGCCAGCTCCCATTAACCTTCTCTGTAATTTTCCATGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR TCA 90 bp | TTTCTAAGACATGGAAAATTACAGAGAAGGTTAATGGGAGCTGGCTaGGATGGCACATACCTGGAATCCCGGCACTTATGGAGGCACAGC | + |
Preference number: 1 (lower is better) Translates to: FLRHGKLQRRLMGAG*DGTYLESRHLWRHS Trigger: GCTGTGCCTCCATAAGTGCCGGGATTCCAGGTATGTGCCATCTCAGCCAGCTCCCATTAACCTTCTCTGTAATTTTCCATGTCTTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR TCA 90 bp | GTTGCTGAATTCTCCACCGATCTGGAGGTCACTGACACAGCAAATTaGATCTCTCAGTTCTGTGAGCTTCTGACTGCCCAGTACCAACAT | + |
Preference number: 1 (lower is better) Translates to: VAEFSTDLEVTDTAN*ISQFCELLTAQYQH Trigger: ATGTTGGTACTGGGCAGTCAGAAGCTCACAGAACTGAGAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR CCA 90 bp | AACCCACAAGCAGGCACTTGTCAGCTCCACGTCAGTCGCCATAACTaGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTT | + |
Preference number: 1 (lower is better) Translates to: NPQAGTCQLHVSRHN*MCNIMSMTRASPSF Trigger: AAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATGGCGACTGACGTGGAGCTGACAAGTGCCTGCTTGTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR TCA 90 bp | GGAATTCCCCTAGTTTGTTGCCTTCGGAATCATAGTGGAGCATTCTaGAGCAAACATCACAAAAGAAACATGGGTCCTCTGGTGCAAAGG | + |
Preference number: 1 (lower is better) Translates to: GIPLVCCLRNHSGAF*SKHHKRNMGPLVQR Trigger: CCTTTGCACCAGAGGACCCATGTTTCTTTTGTGATGTTTGCTTCAGAATGCTCCACTATGATTCCGAAGGCAACAAACTAGGGGAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR GCA 90 bp | TTGGTAAGAAGGGGATACAGTGTTCTATCCAAGCAGTCGTCATGGTaGACAAGCCTTATGTCTGTGATGACAACAACATGCTCACAGTCT | + |
Preference number: 1 (lower is better) Translates to: LVRRGYSVLSKQSSW*TSLMSVMTTTCSQS Trigger: AGACTGTGAGCATGTTGTTGTCATCACAGACATAAGGCTTGTGCACCATGACGACTGCTTGGATAGAACACTGTATCCCCTTCTTACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR GCA 90 bp | GTCCGTGGTGTCAGTAGCACATGGAGTTTTAAAGAATTACCACTGTaGTCCATGTCTGGGGAAATGTCATGTAGACATCGGGCTAAATAC | + |
Preference number: 1 (lower is better) Translates to: VRGVSSTWSFKELPL*SMSGEMSCRHRAKY Trigger: GTATTTAGCCCGATGTCTACATGACATTTCCCCAGACATGGAGCACAGTGGTAATTCTTTAAAACTCCATGTGCTACTGACACCACGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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3UTR CCA 90 bp | TTTTCACAAGCAGGCACTTGTCAGCTCCACGTCAGTCGCCATAACTaGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTT | + |
Preference number: 1 (lower is better) Translates to: FSQAGTCQLHVSRHN*MCNIMSMTRASPSF Trigger: AAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATGGCGACTGACGTGGAGCTGACAAGTGCCTGCTTGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR CCA 90 bp | TTACTTTCTAAGACATGGAAAATTACAGAGAAGGTTAATGGGAGCTaGCTGAGATGGCACATACCTGGAATCCCGGCACTTATGGAGGCA | + |
Preference number: 1 (lower is better) Translates to: LLSKTWKITEKVNGS*LRWHIPGIPALMEA Trigger: TGCCTCCATAAGTGCCGGGATTCCAGGTATGTGCCATCTCAGCCAGCTCCCATTAACCTTCTCTGTAATTTTCCATGTCTTAGAAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR CCA 90 bp | TTCTTGGTAAGAAGGGGATACAGTGTTCTATCCAAGCAGTCGTCATaGTGCACAAGCCTTATGTCTGTGATGACAACAACATGCTCACAG | + |
Preference number: 1 (lower is better) Translates to: FLVRRGYSVLSKQSS*CTSLMSVMTTTCSQ Trigger: CTGTGAGCATGTTGTTGTCATCACAGACATAAGGCTTGTGCACCATGACGACTGCTTGGATAGAACACTGTATCCCCTTCTTACCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR CCA 90 bp | GGAATCATAGTGGAGCATTCTGAAGCAAACATCACAAAAGAAACATaGGTCCTCTGGTGCAAAGGTGTCATTGTTCGTCACCCATCTAGC | + |
Preference number: 1 (lower is better) Translates to: GIIVEHSEANITKET*VLWCKGVIVRHPSS Trigger: GCTAGATGGGTGACGAACAATGACACCTTTGCACCAGAGGACCCATGTTTCTTTTGTGATGTTTGCTTCAGAATGCTCCACTATGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR TCA 90 bp | GGTAATGTAAAGTCTGCCAGTGTTTTCTCCGGCCATGGCTTTAAATaGTATTCTAAACTTAGTACATCTATCTTTCTGATTCTGTTAAGA | + |
Preference number: 1 (lower is better) Translates to: GNVKSASVFSGHGFK*YSKLSTSIFLILLR Trigger: TCTTAACAGAATCAGAAAGATAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGGCAGACTTTACATTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | GCAGTCGTCATGGTGCACAAGCCTTATGTCTGTGATGACAACAACATGCTCACAAATTCTCCACCGATCTaGAGGTCACTGACACAGCAA | + |
Preference number: 2 (lower is better) Translates to: AVVMVHKPYVCDDNNMLTNSPPI*RSLTQQ Trigger: TTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATT...TGTGAGCATGTTGTTGTCATCACAGACATAAGGCTTGTGCACCATGACGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR GCA 90 bp | GGTGTGTGCGTCTCAAGTGCTCTAGAATCAGATCTGAAACTCACAGTGGTGAGCACTCAGGGTACAGAATaGATAGGACTTGGAGAAAAG | + |
Preference number: 2 (lower is better) Translates to: GVCVSSALESDLKLTVVSTQGTE*IGLGEK Trigger: CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGT...GCTCACCACTGTGAGTTTCAGATCTGATTCTAGAGCACTTGAGACGCACACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTATGTGCTCAGGGGCTTaGTCTGGCGCGTTGCTGAAT | + |
Preference number: 2 (lower is better) Translates to: QGLTNTECVLDSLSSHVLMCSGA*SGALLN Trigger: ATTCAGCAACGCGCCAGACCAAGCCCCTGAGCACAT...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR TCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATACTGTGCAGGATGACTaGGGATTCACTGTGGTGTGT | + |
Preference number: 2 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNTVQDD*GFTVVC Trigger: ACACACCACAGTGAATCCTCAGTCATCCTGCACAGT...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | ACATTAGTGGATGTCATTTACCTTGAAAACAATGGCCTCCTCTACAACTTAAAAGAATCCCGGCACTTATaGAGGCACAGCCGGGAGAGC | + |
Preference number: 2 (lower is better) Translates to: TLVDVIYLENNGLLYNLKESRHL*RHSRES Trigger: GCTCTCCCGGCTGTGCCTCCATAAGTGCCGGGATTC...TTTTAAGTTGTAGAGGAGGCCATTGTTTTCAAGGTAAATGACATCCACTAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR-3UTR CCA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATCTCAGGGGCTTGGTCTaGCGCGTTGCTGAATTCTCC | + |
Preference number: 2 (lower is better) Translates to: KKQGLTNTECVLDSLSSHLRGLV*RVAEFS Trigger: GGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAG...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR TCA 90 bp | AAACATCACAAAAGAAACATGGGTCCTCTGGTGCAAAGGTGTCATTGTTCGTCACGATCTGGAGGTCACTaGCACAGCAAATTGAATCTC | + |
Preference number: 2 (lower is better) Translates to: KHHKRNMGPLVQRCHCSSRSGGH*HSKLNL Trigger: GAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCG...TGACGAACAATGACACCTTTGCACCAGAGGACCCATGTTTCTTTTGTGATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR TCA 90 bp | AAGGTGTCATTGTTCGTCACCCATCTAGCTGTATACATCTTACAGACAAAACATTGTAGAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT | + |
Preference number: 2 (lower is better) Translates to: KVSLFVTHLAVYILQTKHCRGLC*CAQGLG Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTCTACA...ATGTTTTGTCTGTAAGATGTATACAGCTAGATGGGTGACGAACAATGACACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR TCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCGTAACATTATGTCCATaGCACGTGCTTCACCTTCTT | + |
Preference number: 2 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFVTLCP*HVLHLL Trigger: AAGAAGGTGAAGCACGTGTCATGGACATAATGTTAC...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR GCA 90 bp | TTTTGTACCACCTTAAGAGCTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCACTCAGGGTACAGAATaGATAGGACTTGGAGAAAAG | + |
Preference number: 2 (lower is better) Translates to: FCTTLRAFEMVRSGFHGCTQGTE*IGLGEK Trigger: CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGT...GCAGCCATGGAATCCACTTCTGACCATCTCAAAAGCTCTTAAGGTGGTACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR-3UTR GCA 90 bp | GCAGTCGTCATGGTGCACAAGCCTTATGTCTGTGATGACAACAACATGCTCACATTCTTCAATCATGTCTaGTGGGTTTTCAGGTTTCTT | + |
Preference number: 2 (lower is better) Translates to: AVVMVHKPYVCDDNNMLTFFNHV*WVFRFL Trigger: AAGAAACCTGAAAACCCAGCAGACATGATTGAAGAA...TGTGAGCATGTTGTTGTCATCACAGACATAAGGCTTGTGCACCATGACGACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR CCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATGTGAGCCAAGCTTCATaGTATGCCTGTGGTAATGTA | + |
Preference number: 2 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNVSQAS*YACGNV Trigger: TACATTACCACAGGCATACCATGAAGCTTGGCTCAC...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | GTTCTATCCAAGCAGTCGTCATGGTGCACAAGCCTTATGTCTGTGATGACAACACAACATGGTCTGGTATaGTTTGTGTTCTTTGTGCTT | + |
Preference number: 2 (lower is better) Translates to: VLSKQSSWCTSLMSVMTTQHGLV*FVFFVL Trigger: AAGCACAAAGAACACAAACCATACCAGACCATGTTG...TGTTGTCATCACAGACATAAGGCTTGTGCACCATGACGACTGCTTGGATAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR TCA 90 bp | ATGCAGCATGCTGTAATTTTGTGCTTTCATGCTGCATGTTTCTTCTTGGAACCAGAAGGATGGAAGAGCTaGGCCAGGAAAAAGCTTTTT | + |
Preference number: 2 (lower is better) Translates to: MQHAVILCFHAACFFLEPEGWKS*ARKKLF Trigger: AAAAAGCTTTTTCCTGGCTCAGCTCTTCCATCCTTC...TGGTTCCAAGAAGAAACATGCAGCATGAAAGCACAAAATTACAGCATGCTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR-3UTR TCA 90 bp | TTGTATGACTGTGTCCGTGGTGTCAGTAGCACATGGAGTTTTAAAGAATTACCAGAAGGATGGAAGAGCTaGGCCAGGAAAAAGCTTTTT | + |
Preference number: 2 (lower is better) Translates to: LYDCVRGVSSTWSFKELPEGWKS*ARKKLF Trigger: AAAAAGCTTTTTCCTGGCTCAGCTCTTCCATCCTTC...TGGTAATTCTTTAAAACTCCATGTGCTACTGACACCACGGACACAGTCATACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATGTCAGTCGCCATAACTaGATGTGTAACATTATGTCC | + |
Preference number: 2 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNVSRHN*MCNIMS Trigger: GGACATAATGTTACACATCCAGTTATGGCGACTGAC...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | CTTTACACAGGGGAATATGGGCATCTGCTAACCTCAGTCACAAAGTTACAGTGTCAGAAGTTAAGAAAGTaGAGAAGAAGCGAGGTTAGT | + |
Preference number: 2 (lower is better) Translates to: LYTGEYGHLLTSVTKLQCQKLRK*RRSEVS Trigger: ACTAACCTCGCTTCTTCTCCACTTTCTTAACTTCTG...ACACTGTAACTTTGTGACTGAGGTTAGCAGATGCCCATATTCCCCTGTGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR-3UTR TCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTACTGTGCAGGATGACTaGGGATTCACTGTGGTGTGT | + |
Preference number: 2 (lower is better) Translates to: STSIFLILLRNKASLILSTVQDD*GFTVVC Trigger: ACACACCACAGTGAATCCTCAGTCATCCTGCACAGT...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR GCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATAGAAAGAGAAGCCTTTaGTGTAATAAGGGGTCAGAA | + |
Preference number: 2 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNRKRSL*CNKGSE Trigger: TTCTGACCCCTTATTACAGCAAAGGCTTCTCTTTCT...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGTGCCCAGTACCAACATaGTCTGGTATGGTTTGTGTT | + |
Preference number: 2 (lower is better) Translates to: LSLSKSTQGTECIGLGEKCPVPT*SGMVCV Trigger: AACACAAACCATACCAGACCATGTTGGTACTGGGCA...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR CCA 90 bp | AAACATCACAAAAGAAACATGGGTCCTCTGGTGCAAAGGTGTCATTGTTCGTCACAAGTCTCTGCATTCTaGGTATCTTCTGTCATTGTA | + |
Preference number: 2 (lower is better) Translates to: KHHKRNMGPLVQRCHCSSQVSAF*VSSVIV Trigger: TACAATGACAGAAGATACCCAGAATGCAGAGACTTG...TGACGAACAATGACACCTTTGCACCAGAGGACCCATGTTTCTTTTGTGATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR TCA 90 bp | AAGCAGGTCTATTTACTATTGAAGCCAATTTCTAAATCCCTTGAATTACCTGTCGTTAAAGGCACAAGGTaGAGCAGGGGTTTAAGAGGT | + |
Preference number: 2 (lower is better) Translates to: KQVYLLLKPISKSLELPVVKGTR*SRGLRG Trigger: ACCTCTTAAACCCCTGCTTCACCTTGTGCCTTTAAC...GACAGGTAATTCAAGGGATTTAGAAATTGGCTTCAATAGTAAATAGACCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR-3UTR TCA 90 bp | AAGGTGTCATTGTTCGTCACCCATCTAGCTGTATACATCTTACAGACAAAACATTCGATCATGGGACTCTaGCCACTCTATAATAGTTCT | + |
Preference number: 2 (lower is better) Translates to: KVSLFVTHLAVYILQTKHSIMGL*PLYNSS Trigger: AGAACTATTATAGAGTGGTCAGAGTCCCATGATCGA...ATGTTTTGTCTGTAAGATGTATACAGCTAGATGGGTGACGAACAATGACACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR GCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTAAGCAGTCGTCATGGTaGACAAGCCTTATGTCTGTG | + |
Preference number: 2 (lower is better) Translates to: STSIFLILLRNKASLILSKQSSW*TSLMSV Trigger: CACAGACATAAGGCTTGTGCACCATGACGACTGCTT...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR CCA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAAGTGAGCCAAGCTTCATaGTATGCCTGTGGTAATGTA | + |
Preference number: 2 (lower is better) Translates to: HNWMCNIMSMTRASPSFKVSQAS*YACGNV Trigger: TACATTACCACAGGCATACCATGAAGCTTGGCTCAC...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR GCA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAAACTCAGGGTACAGAATaGATAGGACTTGGAGAAAAG | + |
Preference number: 2 (lower is better) Translates to: HNWMCNIMSMTRASPSFKTQGTE*IGLGEK Trigger: CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGT...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTGTGAGCCAAGCTTCATaGTATGCCTGTGGTAATGTA | + |
Preference number: 2 (lower is better) Translates to: STSIFLILLRNKASLILSVSQAS*YACGNV Trigger: TACATTACCACAGGCATACCATGAAGCTTGGCTCAC...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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3UTR-3UTR CCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTAAGTACCAACATGGTCTaGTATGGTTTGTGTTCTTTG | + |
Preference number: 2 (lower is better) Translates to: PVFSPAMALNDILNLVHLSTNMV*YGLCSL Trigger: CAAAGAACACAAACCATACCAGACCATGTTGGTACT...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR GCA 90 bp | ACATTAGTGGATGTCATTTACCTTGAAAACAATGGCCTCCTCTACAACTTAAAATTTGTGCTTTCATGCTaGATGTTTCTTCTTGGAACC | + |
Preference number: 2 (lower is better) Translates to: TLVDVIYLENNGLLYNLKFVLSC*MFLLGT Trigger: GGTTCCAAGAAGAAACATGCAGCATGAAAGCACAAA...TTTTAAGTTGTAGAGGAGGCCATTGTTTTCAAGGTAAATGACATCCACTAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR CCA 72 bp | GTAGAGGTCTTTGCTGATGTGCTCAGGGGCTTGGTCTaGCGCGTTGCTGAATTCTCCACCGATCTGGAGGTC | + |
Preference number: 3 (lower is better) Translates to: VEVFADVLRGLV*RVAEFSTDLEV Trigger: GACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATCAGCAAAGACCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR TCA 72 bp | AAGAGGGGAGACTGCTTGATGACTGTGCAGGATGACTaGGGATTCACTGTGGTGTGTGCGTCTCAAGTGCTC | + |
Preference number: 3 (lower is better) Translates to: KRGDCLMTVQDD*GFTVVCASQVL Trigger: GAGCACTTGAGACGCACACACCACAGTGAATCCTCAGTCATCCTGCACAGTCATCAAGCAGTCTCCCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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3UTR TCA 72 bp | CAGGAAGAGGGGAGACTGCTTGATGACTGTGCAGGATaGCTGAGGATTCACTGTGGTGTGTGCGTCTCAAGT | + |
Preference number: 3 (lower is better) Translates to: QEEGRLLDDCAG*LRIHCGVCVSS Trigger: ACTTGAGACGCACACACCACAGTGAATCCTCAGTCATCCTGCACAGTCATCAAGCAGTCTCCCCTCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
||
3UTR CCA 72 bp | GCTTGGTCTGGCGCGTTGCTGAATTCTCCACCGATCTaGAGGTCACTGACACAGCAAATTGAATCTCTCAGT | + |
Preference number: 3 (lower is better) Translates to: AWSGALLNSPPI*RSLTQQIESLS Trigger: ACTGAGAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAGACCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
||
3UTR CCA 72 bp | GCAGGCACTTGTCAGCTCCACGTCAGTCGCCATAACTaGATGTGTAACATTATGTCCATGACACGTGCTTCA | + |
Preference number: 3 (lower is better) Translates to: AGTCQLHVSRHN*MCNIMSMTRAS Trigger: TGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATGGCGACTGACGTGGAGCTGACAAGTGCCTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
||
3UTR GCA 72 bp | AGGGGATACAGTGTTCTATCCAAGCAGTCGTCATGGTaGACAAGCCTTATGTCTGTGATGACAACAACATGC | + |
Preference number: 3 (lower is better) Translates to: RGYSVLSKQSSW*TSLMSVMTTTC Trigger: GCATGTTGTTGTCATCACAGACATAAGGCTTGTGCACCATGACGACTGCTTGGATAGAACACTGTATCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
||
3UTR CCA 72 bp | AAGACATGGAAAATTACAGAGAAGGTTAATGGGAGCTaGCTGAGATGGCACATACCTGGAATCCCGGCACTT | + |
Preference number: 3 (lower is better) Translates to: KTWKITEKVNGS*LRWHIPGIPAL Trigger: AAGTGCCGGGATTCCAGGTATGTGCCATCTCAGCCAGCTCCCATTAACCTTCTCTGTAATTTTCCATGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
||
3UTR TCA 72 bp | AATACCTGGCCATTTTTGTACCACCTTAAGAGCTTTTaGGATGGTCAGAAGTGGATTCCATGGCTGCCTTGG | + |
Preference number: 3 (lower is better) Translates to: NTWPFLYHLKSF*DGQKWIPWLPW Trigger: CCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAGCTCTTAAGGTGGTACAAAAATGGCCAGGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
||
3UTR CCA 72 bp | AGAAGGGGATACAGTGTTCTATCCAAGCAGTCGTCATaGTGCACAAGCCTTATGTCTGTGATGACAACAACA | + |
Preference number: 3 (lower is better) Translates to: RRGYSVLSKQSS*CTSLMSVMTTT Trigger: TGTTGTTGTCATCACAGACATAAGGCTTGTGCACCATGACGACTGCTTGGATAGAACACTGTATCCCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
||
3UTR CCA 72 bp | AACATGGACATAGAGGAGGCTGGAGAAATTAGTCATTaGGCAGTTTCATTGTATGACTGTGTCCGTGGTGTC | + |
Preference number: 3 (lower is better) Translates to: NMDIEEAGEISH*AVSLYDCVRGV Trigger: GACACCACGGACACAGTCATACAATGAAACTGCCCAATGACTAATTTCTCCAGCCTCCTCTATGTCCATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
||
3UTR-3UTR CAA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTTTCACAAGCAGGCACTaGTCAGCTCCACGTCAGTCG | + |
Preference number: 3 (lower is better) Translates to: STSIFLILLRNKASLILSFTSRH*SAPRQS Trigger: CGACTGACGTGGAGCTGACAAGTGCCTGCTTGTGAA...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
||
3UTR TCA 72 bp | CTAGTTTGTTGCCTTCGGAATCATAGTGGAGCATTCTaGAGCAAACATCACAAAAGAAACATGGGTCCTCTG | + |
Preference number: 3 (lower is better) Translates to: LVCCLRNHSGAF*SKHHKRNMGPL Trigger: CAGAGGACCCATGTTTCTTTTGTGATGTTTGCTTCAGAATGCTCCACTATGATTCCGAAGGCAACAAACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
||
3UTR CCA 72 bp | TCATTGTATGACTGTGTCCGTGGTGTCAGTAGCACATaGAGTTTTAAAGAATTACCACTGTGCTCCATGTCT | + |
Preference number: 3 (lower is better) Translates to: SLYDCVRGVSST*SFKELPLCSMS Trigger: AGACATGGAGCACAGTGGTAATTCTTTAAAACTCCATGTGCTACTGACACCACGGACACAGTCATACAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
||
3UTR-3UTR CAA 90 bp | GTGTCATTGTTCGTCACCCATCTAGCTGTATACATCTTACAGACAAAACATTTTCACAGCCAGTGCTTCTaGGTAAGAAGGGGATACAGT | + |
Preference number: 3 (lower is better) Translates to: VSLFVTHLAVYILQTKHFHSQCF*VRRGYS Trigger: ACTGTATCCCCTTCTTACCAAGAAGCACTGGCTGTG...AAAATGTTTTGTCTGTAAGATGTATACAGCTAGATGGGTGACGAACAATGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
||
3UTR TCA 72 bp | AGTCTGAAATTTTCCATATCCTCGATCATGGGACTCTaGCCACTCTATAATAGTTCTGCTCAAGTCTCTGCA | + |
Preference number: 3 (lower is better) Translates to: SLKFSISSIMGL*PLYNSSAQVSA Trigger: TGCAGAGACTTGAGCAGAACTATTATAGAGTGGTCAGAGTCCCATGATCGAGGATATGGAAAATTTCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
||
3UTR CCA 72 bp | AAGCCAATTTCTAAATCCCTTGAATTACCTGTCCTTTaGAGATGTGGGGTACAGCTGGTCTACTTTAGTATG | + |
Preference number: 3 (lower is better) Translates to: KPISKSLELPVL*RCGVQLVYFSM Trigger: CATACTAAAGTAGACCAGCTGTACCCCACATCTCCAAAGGACAGGTAATTCAAGGGATTTAGAAATTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
||
3UTR CCA 72 bp | GAGCTTCTGACTGCCCAGTACCAACATGGTCTGGTATaGTTTGTGTTCTTTGTGCTTATTAAATATAACAGG | + |
Preference number: 3 (lower is better) Translates to: ELLTAQYQHGLV*FVFFVLIKYNR Trigger: CCTGTTATATTTAATAAGCACAAAGAACACAAACCATACCAGACCATGTTGGTACTGGGCAGTCAGAAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
||
3UTR-3UTR CAA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTGAAAAGAATCAGAAGTaGTGTTTCCGACAAGGTTTA | + |
Preference number: 3 (lower is better) Translates to: QGLTNTECVLDSLSSHVLEKNQK*CFRQGL Trigger: TAAACCTTGTCGGAAACACAACTTCTGATTCTTTTC...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
||
3UTR-3UTR CAA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGATGGTCTGGTATGGTTaGTGTTCTTTGTGCTTATTA | + |
Preference number: 3 (lower is better) Translates to: LSLSKSTQGTECIGLGEKMVWYG*CSLCLL Trigger: TAATAAGCACAAAGAACACAAACCATACCAGACCAT...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR-3UTR CAA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGAAAAGAATCAGAAGTaGTGTTTCCGACAAGGTTTA | + |
Preference number: 3 (lower is better) Translates to: KKQGLTNTECVLDSLSSHEKNQK*CFRQGL Trigger: TAAACCTTGTCGGAAACACAACTTCTGATTCTTTTC...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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3UTR TCA 72 bp | AAGTCTGCCAGTGTTTTCTCCGGCCATGGCTTTAAATaGTATTCTAAACTTAGTACATCTATCTTTCTGATT | + |
Preference number: 3 (lower is better) Translates to: KSASVFSGHGFK*YSKLSTSIFLI Trigger: AATCAGAAAGATAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGGCAGACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGGCACTGGGGACTGGGTaGTGTGGGCCACCCGCACCG | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALALGTG*CGPPAP Trigger: CGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGC...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CCA 90 bp | GCTTGGTCTGGCGCGTTGCTGAATTCTCCACCGATCTGGAGGTCACTGACACAGTGCTGTGGCTCGCACTaGGGACTGGGTGCTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: AWSGALLNSPPIWRSLTQCCGSH*GLGAVG Trigger: GCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCA...CTGTGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAGACCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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CDS-3UTR CCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGTGCTGTGGCTCGCACTaGGGACTGGGTGCTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRCCGSH*GLGAVG Trigger: GCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCA...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGTCCGGAAAGCTGCTGTaGCTCGCACTGGGGACTGGG | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALSGKLL*LALGTG Trigger: CCCAGTCCCCAGTGCGAGCCACAGCAGCTTTCCGGA...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGCCTCAGCTCTGCTGCTaGCTCCAGACTGCAGCCCAG | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRPQLCC*LQTAAQ Trigger: CTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGG...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGCACGACCCTCAGCTCTaGTGCTGCCTCCAGACTGCA | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALHDPQL*CCLQTA Trigger: TGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTG...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGCGTATTCCGGAAAGCTaGTGTGGCTCGCACTGGGGA | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRRIPES*CGSHWG Trigger: TCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACG...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGCTCAGGGGCTTGGTCTaGCGCGTTGCTGAATTCTCC | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRLRGLV*RVAEFS Trigger: GGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAG...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGATGTGCTCAGGGGCTTaGTCTGGCGCGTTGCTGAAT | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALMCSGA*SGALLN Trigger: ATTCAGCAACGCGCCAGACCAAGCCCCTGAGCACAT...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR TCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGTGTAGAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALCRGLC*CAQGLG Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTCTACA...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCTGGC | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRRSLLM*SGAWSG Trigger: GCCAGACCAAGCCCCTGAGCACATCAGCAAAGACCT...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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3UTR CAA 72 bp | TCTTTGCTGATGTGCTCAGGGGCTTGGTCTGGCGCGTaGCTGAATTCTCCACCGATCTGGAGGTCACTGACA | + |
Preference number: 4 (lower is better) Translates to: SLLMCSGAWSGA*LNSPPIWRSLT Trigger: TGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATCAGCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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3UTR CAA 72 bp | CGACTTGTAGAGGTCTTTGCTGATGTGCTCAGGGGCTaGGTCTGGCGCGTTGCTGAATTCTCCACCGATCTG | + |
Preference number: 4 (lower is better) Translates to: RLVEVFADVLRG*VWRVAEFSTDL Trigger: CAGATCGGTGGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATCAGCAAAGACCTCTACAAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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CDS-3UTR TCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGCAGTGTTCTCTGGGATaGCTTCCGGGTCTTCATCTT | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRQCSLG*LPGLHL Trigger: AAGATGAAGACCCGGAAGTCATCCCAGAGAACACTG...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR TCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGCGATCTGGAGGTCACTaGCACAGCAAATTGAATCTC | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALRSGGH*HSKLNL Trigger: GAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCG...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTGCACTGGGGACTGGGTaGTGTGGGCCACCCGCACCG | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLALGTG*CGPPAP Trigger: CGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGC...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGAATTCTCCACCGATCTaGAGGTCACTGACACAGCAA | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALNSPPI*RSLTQQ Trigger: TTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATT...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR TCA 90 bp | GTCTGGCGCGTTGCTGAATTCTCCACCGATCTGGAGGTCACTGACACAGCAAATCAGTGTTCTCTGGGATaGCTTCCGGGTCTTCATCTT | + |
Preference number: 4 (lower is better) Translates to: VWRVAEFSTDLEVTDTANQCSLG*LPGLHL Trigger: AAGATGAAGACCCGGAAGTCATCCCAGAGAACACTG...ATTTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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CDS-3UTR TCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGAATCTCTCAGTTCTGTaGGCTTCTGACTGCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRNLSVL*ASDCPV Trigger: TACTGGGCAGTCAGAAGCTCACAGAACTGAGAGATT...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | TTTCATTGTATGACTGTGTCCGTGGTGTCAGTAGCACATGGAGTTTTAAAGAATGCACTGGGGACTGGGTaGTGTGGGCCACCCGCACCG | + |
Preference number: 4 (lower is better) Translates to: FHCMTVSVVSVAHGVLKNALGTG*CGPPAP Trigger: CGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGC...ATTCTTTAAAACTCCATGTGCTACTGACACCACGGACACAGTCATACAATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CTTTACACAGGGGAATATGGGCATCTGCTAACCTCAGTCACAAAGTTACAGTGTCCTCAGCTCTGCTGCTaGCTCCAGACTGCAGCCCAG | + |
Preference number: 4 (lower is better) Translates to: LYTGEYGHLLTSVTKLQCPQLCC*LQTAAQ Trigger: CTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGG...ACACTGTAACTTTGTGACTGAGGTTAGCAGATGCCCATATTCCCCTGTGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR TCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGAGGCGCGATCTATTGTaGTGTTTTCTTCCCGATAGT | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRRRDLL*CFLPDS Trigger: ACTATCGGGAAGAAAACATCACAATAGATCGCGCCT...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGCACTGGGGACTGGGTaGTGTGGGCCACCCGCACCG | + |
Preference number: 4 (lower is better) Translates to: KKQGLTNTECVLDSLSSHALGTG*CGPPAP Trigger: CGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGC...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTAGCACTGGGGACTGGGTaGTGTGGGCCACCCGCACCG | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLALGTG*CGPPAP Trigger: CGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGC...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGACCTGCTCAAGTCTCTaGATTCTGGGTATCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRTCSSL*ILGIFC Trigger: ACAGAAGATACCCAGAATGCAGAGACTTGAGCAGGT...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTTGCTGTGGCTCGCACTaGGGACTGGGTGCTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLCCGSH*GLGAVG Trigger: GCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCA...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGTTCAATCATGTCTGCTaGGTTTTCAGGTTTCTTCCC | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALFNHVC*VFRFLP Trigger: GGGAAGAAACCTGAAAACCCAGCAGACATGATTGAA...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGTGCCCAGTACCAACATaGTCTGGTATGGTTTGTGTT | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRCPVPT*SGMVCV Trigger: AACACAAACCATACCAGACCATGTTGGTACTGGGCA...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
||
CDS-3UTR TCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGACTGACACAGCAAATTaGATCTCTCAGTTCTGTGAG | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRTDTAN*ISQFCE Trigger: CTCACAGAACTGAGAGATTCAATTTGCTGTGTCAGT...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
||
CDS-3UTR GCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCCGTATTCCGGAAAGCTaGTGTGGCTCGCACTGGGGA | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFRIPES*CGSHWG Trigger: TCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACG...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATCACGACCCTCAGCTCTaGTGCTGCCTCCAGACTGCA | + |
Preference number: 4 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNHDPQL*CCLQTA Trigger: TGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTG...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGCAACATGGTCTGGTATaGTTTGTGTTCTTTGTGCTT | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALQHGLV*FVFFVL Trigger: AAGCACAAAGAACACAAACCATACCAGACCATGTTG...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATCGTATTCCGGAAAGCTaGTGTGGCTCGCACTGGGGA | + |
Preference number: 4 (lower is better) Translates to: LLRWSEVDSMAALVINSYRIPES*CGSHWG Trigger: TCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACG...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR GCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTCACGACCCTCAGCTCTaGTGCTGCCTCCAGACTGCA | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLHDPQL*CCLQTA Trigger: TGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTG...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGTTCTTCAATCATGTCTaGTGGGTTTTCAGGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: QGLGHPGAQSESLPPRALFFNHV*WVFRFL Trigger: AAGAAACCTGAAAACCCAGCAGACATGATTGAAGAA...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR GCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCTGGC | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFRSLLM*SGAWSG Trigger: GCCAGACCAAGCCCCTGAGCACATCAGCAAAGACCT...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | GGTGTGTGCGTCTCAAGTGCTCTAGAATCAGATCTGAAACTCACAGTGGTGAGCAAGCAGTCGTCATGGTaGACAAGCCTTATGTCTGTG | + |
Preference number: 4 (lower is better) Translates to: GVCVSSALESDLKLTVVSKQSSW*TSLMSV Trigger: CACAGACATAAGGCTTGTGCACCATGACGACTGCTT...GCTCACCACTGTGAGTTTCAGATCTGATTCTAGAGCACTTGAGACGCACACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTATGCTGTGGCTCGCACTaGGGACTGGGTGCTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLCCGSH*GLGAVG Trigger: GCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCA...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGAGTACCAACATGGTCTaGTATGGTTTGTGTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRSTNMV*YGLCSL Trigger: CAAAGAACACAAACCATACCAGACCATGTTGGTACT...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CCA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATCTCAGGGGCTTGGTCTaGCGCGTTGCTGAATTCTCC | + |
Preference number: 4 (lower is better) Translates to: LLRWSEVDSMAALVINSYLRGLV*RVAEFS Trigger: GGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAG...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CCA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGCAAGTCTCTGCATTCTaGGTATCTTCTGTCATTGTA | + |
Preference number: 4 (lower is better) Translates to: MNQGLGHPGAQSESLPPRQVSAF*VSSVIV Trigger: TACAATGACAGAAGATACCCAGAATGCAGAGACTTG...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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3UTR CAA 72 bp | GAGGAGGCTGGAGAAATTAGTCATTGGGCAGTTTCATaGTATGACTGTGTCCGTGGTGTCAGTAGCACATGG | + |
Preference number: 4 (lower is better) Translates to: EEAGEISHWAVS*YDCVRGVSSTW Trigger: CCATGTGCTACTGACACCACGGACACAGTCATACAATGAAACTGCCCAATGACTAATTTCTCCAGCCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | GTGTCATTGTTCGTCACCCATCTAGCTGTATACATCTTACAGACAAAACATTTTCCTCAGCTCTGCTGCTaGCTCCAGACTGCAGCCCAG | + |
Preference number: 4 (lower is better) Translates to: VSLFVTHLAVYILQTKHFPQLCC*LQTAAQ Trigger: CTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGG...AAAATGTTTTGTCTGTAAGATGTATACAGCTAGATGGGTGACGAACAATGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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CDS-3UTR GCA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCTGGC | + |
Preference number: 4 (lower is better) Translates to: LLRWSEVDSMAALVINSYRSLLM*SGAWSG Trigger: GCCAGACCAAGCCCCTGAGCACATCAGCAAAGACCT...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR GCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGCGTATTCCGGAAAGCTaGTGTGGCTCGCACTGGGGA | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKRIPES*CGSHWG Trigger: TCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACG...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CAGGATATAAGATGTTCACAGATAGGATACACTCTCCTTCTTCAATCATGTCTGCGTATTCCGGAAAGCTaGTGTGGCTCGCACTGGGGA | + |
Preference number: 4 (lower is better) Translates to: QDIRCSQIGYTLLLQSCLRIPES*CGSHWG Trigger: TCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACG...CAGACATGATTGAAGAAGGAGAGTGTATCCTATCTGTGAACATCTTATATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |
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CDS-3UTR GCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTCCTCAGCTCTGCTGCTaGCTCCAGACTGCAGCCCAG | + |
Preference number: 4 (lower is better) Translates to: STSIFLILLRNKASLILSPQLCC*LQTAAQ Trigger: CTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGG...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | TTTCATTGTATGACTGTGTCCGTGGTGTCAGTAGCACATGGAGTTTTAAAGAATCTCAGGGGCTTGGTCTaGCGCGTTGCTGAATTCTCC | + |
Preference number: 4 (lower is better) Translates to: FHCMTVSVVSVAHGVLKNLRGLV*RVAEFS Trigger: GGAGAATTCAGCAACGCGCCAGACCAAGCCCCTGAG...ATTCTTTAAAACTCCATGTGCTACTGACACCACGGACACAGTCATACAATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCAATCTCTCAGTTCTGTaGGCTTCTGACTGCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFNLSVL*ASDCPV Trigger: TACTGGGCAGTCAGAAGCTCACAGAACTGAGAGATT...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTTGTAGAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLCRGLC*CAQGLG Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTCTACA...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTCACGACCCTCAGCTCTaGTGCTGCCTCCAGACTGCA | + |
Preference number: 4 (lower is better) Translates to: STSIFLILLRNKASLILSHDPQL*CCLQTA Trigger: TGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTG...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | GGTGTGTGCGTCTCAAGTGCTCTAGAATCAGATCTGAAACTCACAGTGGTGAGCCAACATGGTCTGGTATaGTTTGTGTTCTTTGTGCTT | + |
Preference number: 4 (lower is better) Translates to: GVCVSSALESDLKLTVVSQHGLV*FVFFVL Trigger: AAGCACAAAGAACACAAACCATACCAGACCATGTTG...GCTCACCACTGTGAGTTTCAGATCTGATTCTAGAGCACTTGAGACGCACACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCAATTCTCCACCGATCTaGAGGTCACTGACACAGCAA | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFNSPPI*RSLTQQ Trigger: TTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATT...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | ATGCAGCATGCTGTAATTTTGTGCTTTCATGCTGCATGTTTCTTCTTGGAACCACAGTGTTCTCTGGGATaGCTTCCGGGTCTTCATCTT | + |
Preference number: 4 (lower is better) Translates to: MQHAVILCFHAACFFLEPQCSLG*LPGLHL Trigger: AAGATGAAGACCCGGAAGTCATCCCAGAGAACACTG...TGGTTCCAAGAAGAAACATGCAGCATGAAAGCACAAAATTACAGCATGCTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR TCA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATAATCTCTCAGTTCTGTaGGCTTCTGACTGCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: LLRWSEVDSMAALVINSYNLSVL*ASDCPV Trigger: TACTGGGCAGTCAGAAGCTCACAGAACTGAGAGATT...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR TCA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATCGATCTGGAGGTCACTaGCACAGCAAATTGAATCTC | + |
Preference number: 4 (lower is better) Translates to: LLRWSEVDSMAALVINSYRSGGH*HSKLNL Trigger: GAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCG...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR TCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATCGATCTGGAGGTCACTaGCACAGCAAATTGAATCTC | + |
Preference number: 4 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNRSGGH*HSKLNL Trigger: GAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCG...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCTGCCCAGTACCAACATaGTCTGGTATGGTTTGTGTT | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFCPVPT*SGMVCV Trigger: AACACAAACCATACCAGACCATGTTGGTACTGGGCA...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | ACAGGGGAATATGGGCATCTGCTAACCTCAGTCACAAAGTTACAGTGTTTTGAAAATTCTCCACCGATCTaGAGGTCACTGACACAGCAA | + |
Preference number: 4 (lower is better) Translates to: TGEYGHLLTSVTKLQCFENSPPI*RSLTQQ Trigger: TTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATT...TTCAAAACACTGTAACTTTGTGACTGAGGTTAGCAGATGCCCATATTCCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTAATGTGCTCAGGGGCTTaGTCTGGCGCGTTGCTGAAT | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLMCSGA*SGALLN Trigger: ATTCAGCAACGCGCCAGACCAAGCCCCTGAGCACAT...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCCCATATCCTCGATCATaGGACTCTGACCACTCTATA | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFPYPRS*DSDHSI Trigger: TATAGAGTGGTCAGAGTCCCATGATCGAGGATATGG...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | ACAGGGGAATATGGGCATCTGCTAACCTCAGTCACAAAGTTACAGTGTTTTGAATCCAAGCAGTCGTCATaGTGCACAAGCCTTATGTCT | + |
Preference number: 4 (lower is better) Translates to: TGEYGHLLTSVTKLQCFESKQSS*CTSLMS Trigger: AGACATAAGGCTTGTGCACCATGACGACTGCTTGGA...TTCAAAACACTGTAACTTTGTGACTGAGGTTAGCAGATGCCCATATTCCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTCCAAGCAGTCGTCATaGTGCACAAGCCTTATGTCT | + |
Preference number: 4 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNSKQSS*CTSLMS Trigger: AGACATAAGGCTTGTGCACCATGACGACTGCTTGGA...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | GGTGTGTGCGTCTCAAGTGCTCTAGAATCAGATCTGAAACTCACAGTGGTGAGCCTAATTAAAGGTTCCTaGGTCAACATAAGGATAAGC | + |
Preference number: 4 (lower is better) Translates to: GVCVSSALESDLKLTVVSLIKGS*VNIRIS Trigger: GCTTATCCTTATGTTGACCCAGGAACCTTTAATTAG...GCTCACCACTGTGAGTTTCAGATCTGATTCTAGAGCACTTGAGACGCACACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCACTGACACAGCAAATTaGATCTCTCAGTTCTGTGAG | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFTDTAN*ISQFCE Trigger: CTCACAGAACTGAGAGATTCAATTTGCTGTGTCAGT...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATTGTAGAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: KKQGLTNTECVLDSLSSHCRGLC*CAQGLG Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTCTACA...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTATGTAGAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLCRGLC*CAQGLG Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTCTACA...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCTTCTGCTCAAGTCTCTaGATTCTGGGTATCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFFCSSL*ILGIFC Trigger: ACAGAAGATACCCAGAATGCAGAGACTTGAGCAGAA...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTACATGGGTCCTCTGGTaGAAAGGTGTCATTGTTCGT | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLTWVLW*KGVIVR Trigger: ACGAACAATGACACCTTTGCACCAGAGGACCCATGT...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | TTGTATGACTGTGTCCGTGGTGTCAGTAGCACATGGAGTTTTAAAGAATTACCAAATTCTCCACCGATCTaGAGGTCACTGACACAGCAA | + |
Preference number: 4 (lower is better) Translates to: LYDCVRGVSSTWSFKELPNSPPI*RSLTQQ Trigger: TTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATT...TGGTAATTCTTTAAAACTCCATGTGCTACTGACACCACGGACACAGTCATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTACAGTGTTCTCTGGGATaGCTTCCGGGTCTTCATCTT | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLQCSLG*LPGLHL Trigger: AAGATGAAGACCCGGAAGTCATCCCAGAGAACACTG...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGAATCTCTCAGTTCTGTaGGCTTCTGACTGCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKNLSVL*ASDCPV Trigger: TACTGGGCAGTCAGAAGCTCACAGAACTGAGAGATT...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
||
CDS-3UTR GCA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATTTCTGCTCAAGTCTCTaGATTCTGGGTATCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: LLRWSEVDSMAALVINSYFCSSL*ILGIFC Trigger: ACAGAAGATACCCAGAATGCAGAGACTTGAGCAGAA...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
||
CDS-3UTR GCA 90 bp | TTTCATTGTATGACTGTGTCCGTGGTGTCAGTAGCACATGGAGTTTTAAAGAATACATGGGTCCTCTGGTaGAAAGGTGTCATTGTTCGT | + |
Preference number: 4 (lower is better) Translates to: FHCMTVSVVSVAHGVLKNTWVLW*KGVIVR Trigger: ACGAACAATGACACCTTTGCACCAGAGGACCCATGT...ATTCTTTAAAACTCCATGTGCTACTGACACCACGGACACAGTCATACAATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATATTCCCCTAGTTTGTTaGCTTCGGAATCATAGTGGA | + |
Preference number: 4 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNIPLVC*LRNHSG Trigger: TCCACTATGATTCCGAAGGCAACAAACTAGGGGAAT...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTTGCCCAGTACCAACATaGTCTGGTATGGTTTGTGTT | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLCPVPT*SGMVCV Trigger: AACACAAACCATACCAGACCATGTTGGTACTGGGCA...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | TTGTATGACTGTGTCCGTGGTGTCAGTAGCACATGGAGTTTTAAAGAATTACCACCATATCCTCGATCATaGGACTCTGACCACTCTATA | + |
Preference number: 4 (lower is better) Translates to: LYDCVRGVSSTWSFKELPPYPRS*DSDHSI Trigger: TATAGAGTGGTCAGAGTCCCATGATCGAGGATATGG...TGGTAATTCTTTAAAACTCCATGTGCTACTGACACCACGGACACAGTCATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTGAAACATGGGTCCTCTaGTGCAAAGGTGTCATTGTT | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLETWVL*CKGVIV Trigger: AACAATGACACCTTTGCACCAGAGGACCCATGTTTC...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | ATGCAGCATGCTGTAATTTTGTGCTTTCATGCTGCATGTTTCTTCTTGGAACCAACTGACACAGCAAATTaGATCTCTCAGTTCTGTGAG | + |
Preference number: 4 (lower is better) Translates to: MQHAVILCFHAACFFLEPTDTAN*ISQFCE Trigger: CTCACAGAACTGAGAGATTCAATTTGCTGTGTCAGT...TGGTTCCAAGAAGAAACATGCAGCATGAAAGCACAAAATTACAGCATGCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR TCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTACTGACACAGCAAATTaGATCTCTCAGTTCTGTGAG | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLTDTAN*ISQFCE Trigger: CTCACAGAACTGAGAGATTCAATTTGCTGTGTCAGT...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
||
CDS-3UTR TCA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAACGATCTGGAGGTCACTaGCACAGCAAATTGAATCTC | + |
Preference number: 4 (lower is better) Translates to: HNWMCNIMSMTRASPSFKRSGGH*HSKLNL Trigger: GAGATTCAATTTGCTGTGTCAGTGACCTCCAGATCG...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
||
CDS-3UTR GCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTAAAGCAGTCGTCATGGTaGACAAGCCTTATGTCTGTG | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLKQSSW*TSLMSV Trigger: CACAGACATAAGGCTTGTGCACCATGACGACTGCTT...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTAACATGGGTCCTCTGGTaGAAAGGTGTCATTGTTCGT | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLTWVLW*KGVIVR Trigger: ACGAACAATGACACCTTTGCACCAGAGGACCCATGT...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTATTCCCCTAGTTTGTTaGCTTCGGAATCATAGTGGA | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLIPLVC*LRNHSG Trigger: TCCACTATGATTCCGAAGGCAACAAACTAGGGGAAT...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | ATGCAGCATGCTGTAATTTTGTGCTTTCATGCTGCATGTTTCTTCTTGGAACCATTCAATCATGTCTGCTaGGTTTTCAGGTTTCTTCCC | + |
Preference number: 4 (lower is better) Translates to: MQHAVILCFHAACFFLEPFNHVC*VFRFLP Trigger: GGGAAGAAACCTGAAAACCCAGCAGACATGATTGAA...TGGTTCCAAGAAGAAACATGCAGCATGAAAGCACAAAATTACAGCATGCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CCA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATCAACATGGTCTGGTATaGTTTGTGTTCTTTGTGCTT | + |
Preference number: 4 (lower is better) Translates to: LLRWSEVDSMAALVINSYQHGLV*FVFFVL Trigger: AAGCACAAAGAACACAAACCATACCAGACCATGTTG...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CCA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCCTAATTAAAGGTTCCTaGGTCAACATAAGGATAAGC | + |
Preference number: 4 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFLIKGS*VNIRIS Trigger: GCTTATCCTTATGTTGACCCAGGAACCTTTAATTAG...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGTCGATCATGGGACTCTaGCCACTCTATAATAGTTCT | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKSIMGL*PLYNSS Trigger: AGAACTATTATAGAGTGGTCAGAGTCCCATGATCGA...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATGTGCTTTCCATTCTAGCAGTCTaGAATTTTCCATATCCTCGA | + |
Preference number: 4 (lower is better) Translates to: QGLTNTECVLDSLSSHVLSILAV*NFPYPR Trigger: TCGAGGATATGGAAAATTTCAGACTGCTAGAATGGA...AAGCACATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGTTCTGCTCAAGTCTCTaGATTCTGGGTATCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKFCSSL*ILGIFC Trigger: ACAGAAGATACCCAGAATGCAGAGACTTGAGCAGAA...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | ACATTAGTGGATGTCATTTACCTTGAAAACAATGGCCTCCTCTACAACTTAAAAAAGCAGTCGTCATGGTaGACAAGCCTTATGTCTGTG | + |
Preference number: 4 (lower is better) Translates to: TLVDVIYLENNGLLYNLKKQSSW*TSLMSV Trigger: CACAGACATAAGGCTTGTGCACCATGACGACTGCTT...TTTTAAGTTGTAGAGGAGGCCATTGTTTTCAAGGTAAATGACATCCACTAATGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGTTCAATCATGTCTGCTaGGTTTTCAGGTTTCTTCCC | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKFNHVC*VFRFLP Trigger: GGGAAGAAACCTGAAAACCCAGCAGACATGATTGAA...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTTCCAAGCAGTCGTCATaGTGCACAAGCCTTATGTCT | + |
Preference number: 4 (lower is better) Translates to: STSIFLILLRNKASLILSSKQSS*CTSLMS Trigger: AGACATAAGGCTTGTGCACCATGACGACTGCTTGGA...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAAGAAACATGGGTCCTCTaGTGCAAAGGTGTCATTGTT | + |
Preference number: 4 (lower is better) Translates to: HNWMCNIMSMTRASPSFKETWVL*CKGVIV Trigger: AACAATGACACCTTTGCACCAGAGGACCCATGTTTC...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATTCGATCATGGGACTCTaGCCACTCTATAATAGTTCT | + |
Preference number: 4 (lower is better) Translates to: KKQGLTNTECVLDSLSSHSIMGL*PLYNSS Trigger: AGAACTATTATAGAGTGGTCAGAGTCCCATGATCGA...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGTCCATTCTAGCAGTCTaGAATTTTCCATATCCTCGA | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKSILAV*NFPYPR Trigger: TCGAGGATATGGAAAATTTCAGACTGCTAGAATGGA...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGCATAGTGGAGCATTCTaGAGCAAACATCACAAAAGA | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKHSGAF*SKHHKR Trigger: TCTTTTGTGATGTTTGCTTCAGAATGCTCCACTATG...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAATTCAATCATGTCTGCTaGGTTTTCAGGTTTCTTCCC | + |
Preference number: 4 (lower is better) Translates to: HNWMCNIMSMTRASPSFKFNHVC*VFRFLP Trigger: GGGAAGAAACCTGAAAACCCAGCAGACATGATTGAA...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGCAACATGGTCTGGTATaGTTTGTGTTCTTTGTGCTT | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKQHGLV*FVFFVL Trigger: AAGCACAAAGAACACAAACCATACCAGACCATGTTG...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGAGTACCAACATGGTCTaGTATGGTTTGTGTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: LSLSKSTQGTECIGLGEKSTNMV*YGLCSL Trigger: CAAAGAACACAAACCATACCAGACCATGTTGGTACT...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | ACATTAGTGGATGTCATTTACCTTGAAAACAATGGCCTCCTCTACAACTTAAAACCATATCCTCGATCATaGGACTCTGACCACTCTATA | + |
Preference number: 4 (lower is better) Translates to: TLVDVIYLENNGLLYNLKPYPRS*DSDHSI Trigger: TATAGAGTGGTCAGAGTCCCATGATCGAGGATATGG...TTTTAAGTTGTAGAGGAGGCCATTGTTTTCAAGGTAAATGACATCCACTAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR TCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTTCGATCATGGGACTCTaGCCACTCTATAATAGTTCT | + |
Preference number: 4 (lower is better) Translates to: STSIFLILLRNKASLILSSIMGL*PLYNSS Trigger: AGAACTATTATAGAGTGGTCAGAGTCCCATGATCGA...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTATCCATTCTAGCAGTCTaGAATTTTCCATATCCTCGA | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLSILAV*NFPYPR Trigger: TCGAGGATATGGAAAATTTCAGACTGCTAGAATGGA...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATCATAGTGGAGCATTCTaGAGCAAACATCACAAAAGA | + |
Preference number: 4 (lower is better) Translates to: KKQGLTNTECVLDSLSSHHSGAF*SKHHKR Trigger: TCTTTTGTGATGTTTGCTTCAGAATGCTCCACTATG...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | AAGCAGGTCTATTTACTATTGAAGCCAATTTCTAAATCCCTTGAATTACCTGTCATTCCCCTAGTTTGTTaGCTTCGGAATCATAGTGGA | + |
Preference number: 4 (lower is better) Translates to: KQVYLLLKPISKSLELPVIPLVC*LRNHSG Trigger: TCCACTATGATTCCGAAGGCAACAAACTAGGGGAAT...GACAGGTAATTCAAGGGATTTAGAAATTGGCTTCAATAGTAAATAGACCTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CCA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAAAGTACCAACATGGTCTaGTATGGTTTGTGTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: HNWMCNIMSMTRASPSFKSTNMV*YGLCSL Trigger: CAAAGAACACAAACCATACCAGACCATGTTGGTACT...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTACAAGTCTCTGCATTCTaGGTATCTTCTGTCATTGTA | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLQVSAF*VSSVIV Trigger: TACAATGACAGAAGATACCCAGAATGCAGAGACTTG...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATCAAGTCTCTGCATTCTaGGTATCTTCTGTCATTGTA | + |
Preference number: 4 (lower is better) Translates to: KKQGLTNTECVLDSLSSHQVSAF*VSSVIV Trigger: TACAATGACAGAAGATACCCAGAATGCAGAGACTTG...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR TCA 90 bp | AAGCAGGTCTATTTACTATTGAAGCCAATTTCTAAATCCCTTGAATTACCTGTCCATAGTGGAGCATTCTaGAGCAAACATCACAAAAGA | + |
Preference number: 4 (lower is better) Translates to: KQVYLLLKPISKSLELPVHSGAF*SKHHKR Trigger: TCTTTTGTGATGTTTGCTTCAGAATGCTCCACTATG...GACAGGTAATTCAAGGGATTTAGAAATTGGCTTCAATAGTAAATAGACCTGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR GCA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATTTCTTCAATCATGTCTaGTGGGTTTTCAGGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: KKQGLTNTECVLDSLSSHFFNHV*WVFRFL Trigger: AAGAAACCTGAAAACCCAGCAGACATGATTGAAGAA...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CCAGTGTTTTCTCCGGCCATGGCTTTAAATGATATTCTAAACTTAGTACATCTATTCTTCAATCATGTCTaGTGGGTTTTCAGGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: PVFSPAMALNDILNLVHLFFNHV*WVFRFL Trigger: AAGAAACCTGAAAACCCAGCAGACATGATTGAAGAA...TAGATGTACTAAGTTTAGAATATCATTTAAAGCCATGGCCGGAGAAAACACTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR GCA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAATTCTTCAATCATGTCTaGTGGGTTTTCAGGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: HNWMCNIMSMTRASPSFKFFNHV*WVFRFL Trigger: AAGAAACCTGAAAACCCAGCAGACATGATTGAAGAA...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTAGTACCAACATGGTCTaGTATGGTTTGTGTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: STSIFLILLRNKASLILSSTNMV*YGLCSL Trigger: CAAAGAACACAAACCATACCAGACCATGTTGGTACT...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CCA 90 bp | ACATTAGTGGATGTCATTTACCTTGAAAACAATGGCCTCCTCTACAACTTAAAACTAATTAAAGGTTCCTaGGTCAACATAAGGATAAGC | + |
Preference number: 4 (lower is better) Translates to: TLVDVIYLENNGLLYNLKLIKGS*VNIRIS Trigger: GCTTATCCTTATGTTGACCCAGGAACCTTTAATTAG...TTTTAAGTTGTAGAGGAGGCCATTGTTTTCAAGGTAAATGACATCCACTAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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3UTR CAA 72 bp | ACAAACAACAGTAGCTTAAAGCAGGTCTATTTACTATaGAAGCCAATTTCTAAATCCCTTGAATTACCTGTC | + |
Preference number: 4 (lower is better) Translates to: TNNSSLKQVYLL*KPISKSLELPV Trigger: GACAGGTAATTCAAGGGATTTAGAAATTGGCTTCAATAGTAAATAGACCTGCTTTAAGCTACTGTTGTTTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS CCA 90 bp | GCAACTCGGGAAGCTCGTATTCCGGAAAGCTGCTGTGGCTCGCACTaGGGACTGGGTGCTGTGGGCCACCCGCACCGCCGCCCTGCAGGT | + |
Preference number: 5 (lower is better) Translates to: ATREARIPESCCGSH*GLGAVGHPHRRPAG Trigger: ACCTGCAGGGCGGCGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACGAGCTTCCCGAGTTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 90 bp | ACGCGCGTGTGCAACTCGGGAAGCTCGTATTCCGGAAAGCTGCTGTaGCTCGCACTGGGGACTGGGTGCTGTGGGCCACCCGCACCGCCG | + |
Preference number: 5 (lower is better) Translates to: TRVCNSGSSYSGKLL*LALGTGCCGPPAPP Trigger: CGGCGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACGAGCTTCCCGAGTTGCACACGCGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 90 bp | TCGGTCGGCTGCTCGGCTGCCTGCGGTTCGCTCAGCGACAAATCCTaGGCCCCTAGCCGGCCACGCCATAGCTCCCCAAAGGAGCCCACA | + |
Preference number: 5 (lower is better) Translates to: SVGCSAACGSLSDKS*APSRPRHSSPKEPT Trigger: TGTGGGCTCCTTTGGGGAGCTATGGCGTGGCCGGCTAGGGGCCCAGGATTTGTCGCTGAGCGAACCGCAGGCAGCCGAGCAGCCGACCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 90 bp | GGAACACGCGCGTGTGCAACTCGGGAAGCTCGTATTCCGGAAAGCTaGTGTGGCTCGCACTGGGGACTGGGTGCTGTGGGCCACCCGCAC | + |
Preference number: 5 (lower is better) Translates to: GTRACATREARIPES*CGSHWGLGAVGHPH Trigger: GTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACGAGCTTCCCGAGTTGCACACGCGCGTGTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 90 bp | CAGCTCTGCTGCTGCCTCCAGACTGCAGCCCAGATCGCTGGCTACTaGAGCATCCTCAAAGCCGTCGTTGGATGCCCCTCCGTCGGTCGG | + |
Preference number: 5 (lower is better) Translates to: QLCCCLQTAAQIAGY*SILKAVVGCPSVGR Trigger: CCGACCGACGGAGGGGCATCCAACGACGGCTTTGAGGATGCTGCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 90 bp | TGGGCCCCTAGCCGGCCACGCCATAGCTCCCCAAAGGAGCCCACATaGAACACGCGCGTGTGCAACTCGGGAAGCTCGTATTCCGGAAAG | + |
Preference number: 5 (lower is better) Translates to: WAPSRPRHSSPKEPT*NTRVCNSGSSYSGK Trigger: CTTTCCGGAATACGAGCTTCCCGAGTTGCACACGCGCGTGTTCCATGTGGGCTCCTTTGGGGAGCTATGGCGTGGCCGGCTAGGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 90 bp | CGACCCTCAGCTCTGCTGCTGCCTCCAGACTGCAGCCCAGATCGCTaGCTACTGCAGCATCCTCAAAGCCGTCGTTGGATGCCCCTCCGT | + |
Preference number: 5 (lower is better) Translates to: RPSALLLPPDCSPDR*LLQHPQSRRWMPLR Trigger: ACGGAGGGGCATCCAACGACGGCTTTGAGGATGCTGCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 90 bp | CCACGCCATAGCTCCCCAAAGGAGCCCACATGGAACACGCGCGTGTaGAACTCGGGAAGCTCGTATTCCGGAAAGCTGCTGTGGCTCGCA | + |
Preference number: 5 (lower is better) Translates to: PRHSSPKEPTWNTRV*NSGSSYSGKLLWLA Trigger: TGCGAGCCACAGCAGCTTTCCGGAATACGAGCTTCCCGAGTTGCACACGCGCGTGTTCCATGTGGGCTCCTTTGGGGAGCTATGGCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 90 bp | TATCAAGGCCGCACACGACCCTCAGCTCTGCTGCTGCCTCCAGACTaGAGCCCAGATCGCTGGCTACTGCAGCATCCTCAAAGCCGTCGT | + |
Preference number: 5 (lower is better) Translates to: YQGRTRPSALLLPPD*SPDRWLLQHPQSRR Trigger: ACGACGGCTTTGAGGATGCTGCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTGTGCGGCCTTGATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 90 bp | GAGGCATCTCAGTTTATCAAGGCCGCACACGACCCTCAGCTCTGCTaGTGCCTCCAGACTGCAGCCCAGATCGCTGGCTACTGCAGCATC | + |
Preference number: 5 (lower is better) Translates to: EASQFIKAAHDPQLC*CLQTAAQIAGYCSI Trigger: GATGCTGCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTGTGCGGCCTTGATAAACTGAGATGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS-3UTR CAA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGGATGTGCTCAGGGGCTaGGTCTGGCGCGTTGCTGAA | + |
Preference number: 5 (lower is better) Translates to: QGLGHPGAQSESLPPRALDVLRG*VWRVAE Trigger: TTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATC...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CAA 90 bp | GGTGTGTGCGTCTCAAGTGCTCTAGAATCAGATCTGAAACTCACAGTGGTGAGCGATGTGCTCAGGGGCTaGGTCTGGCGCGTTGCTGAA | + |
Preference number: 5 (lower is better) Translates to: GVCVSSALESDLKLTVVSDVLRG*VWRVAE Trigger: TTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATC...GCTCACCACTGTGAGTTTCAGATCTGATTCTAGAGCACTTGAGACGCACACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS TCA 90 bp | GCCCCTTCCTCACACATAAAGTCACTAGGTCAGTGTTCTCTGGGATaGCTTCCGGGTCTTCATCTTCCCCGAGGCATCTCAGTTTATCAA | + |
Preference number: 5 (lower is better) Translates to: APSSHIKSLGQCSLG*LPGLHLPRGISVYQ Trigger: TTGATAAACTGAGATGCCTCGGGGAAGATGAAGACCCGGAAGTCATCCCAGAGAACACTGACCTAGTGACTTTATGTGTGAGGAAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CAA 90 bp | CTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCTTGGTGATTAACAGTTATGATGTGCTCAGGGGCTaGGTCTGGCGCGTTGCTGAA | + |
Preference number: 5 (lower is better) Translates to: LLRWSEVDSMAALVINSYDVLRG*VWRVAE Trigger: TTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATC...ATAACTGTTAATCACCAAGGCAGCCATGGAATCCACTTCTGACCATCTCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CAA 90 bp | CAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGGCTTTGATAAGCAAATATTTCTaGTCTACAGGCGCGATCTAT | + |
Preference number: 5 (lower is better) Translates to: QGLGHPGAQSESLPPRALISKYF*STGAIY Trigger: ATAGATCGCGCCTGTAGACAAGAAATATTTGCTTAT...CAAAGCCCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CAA 90 bp | ATGAACCAAGGTCTAGGCCATCCAGGGGCACAGAGTGAATCCCTTCCTCCAAGGATGGTCTGGTATGGTTaGTGTTCTTTGTGCTTATTA | + |
Preference number: 5 (lower is better) Translates to: MNQGLGHPGAQSESLPPRMVWYG*CSLCLL Trigger: TAATAAGCACAAAGAACACAAACCATACCAGACCAT...CCTTGGAGGAAGGGATTCACTCTGTGCCCCTGGATGGCCTAGACCTTGGTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071544.11 |
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CDS-3UTR CAA 90 bp | TTTTGTACCACCTTAAGAGCTTTTGAGATGGTCAGAAGTGGATTCCATGGCTGCCACAGCCAGTGCTTCTaGGTAAGAAGGGGATACAGT | + |
Preference number: 5 (lower is better) Translates to: FCTTLRAFEMVRSGFHGCHSQCF*VRRGYS Trigger: ACTGTATCCCCTTCTTACCAAGAAGCACTGGCTGTG...GCAGCCATGGAATCCACTTCTGACCATCTCAAAAGCTCTTAAGGTGGTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CAA 90 bp | TCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATTTCCACAGCCAGTGCTTCTaGGTAAGAAGGGGATACAGT | + |
Preference number: 5 (lower is better) Translates to: SHTFHPDYSVPVFSFLNFHSQCF*VRRGYS Trigger: ACTGTATCCCCTTCTTACCAAGAAGCACTGGCTGTG...GAAATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CAA 90 bp | AGTACATCTATCTTTCTGATTCTGTTAAGAAACAAGGCCTCACTAATACTGAGTGATGTGCTCAGGGGCTaGGTCTGGCGCGTTGCTGAA | + |
Preference number: 5 (lower is better) Translates to: STSIFLILLRNKASLILSDVLRG*VWRVAE Trigger: TTCAGCAACGCGCCAGACCAAGCCCCTGAGCACATC...ACTCAGTATTAGTGAGGCCTTGTTTCTTAACAGAATCAGAAAGATAGATGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CAA 90 bp | ATGCAGCATGCTGTAATTTTGTGCTTTCATGCTGCATGTTTCTTCTTGGAACCAGGTGCAAAGGTGTCATaGTTCGTCACCCATCTAGCT | + |
Preference number: 5 (lower is better) Translates to: MQHAVILCFHAACFFLEPGAKVS*FVTHLA Trigger: AGCTAGATGGGTGACGAACAATGACACCTTTGCACC...TGGTTCCAAGAAGAAACATGCAGCATGAAAGCACAAAATTACAGCATGCTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CAA 90 bp | AAGAAACAAGGCCTCACTAATACTGAGTGTGTCTTAGATTCATTGTCATCTCATCACAGCCAGTGCTTCTaGGTAAGAAGGGGATACAGT | + |
Preference number: 5 (lower is better) Translates to: KKQGLTNTECVLDSLSSHHSQCF*VRRGYS Trigger: ACTGTATCCCCTTCTTACCAAGAAGCACTGGCTGTG...ATGAGATGACAATGAATCTAAGACACACTCAGTATTAGTGAGGCCTTGTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CAA 90 bp | CATAACTGGATGTGTAACATTATGTCCATGACACGTGCTTCACCTTCTTTTAAAGGTGCAAAGGTGTCATaGTTCGTCACCCATCTAGCT | + |
Preference number: 5 (lower is better) Translates to: HNWMCNIMSMTRASPSFKGAKVS*FVTHLA Trigger: AGCTAGATGGGTGACGAACAATGACACCTTTGCACC...TTTAAAAGAAGGTGAAGCACGTGTCATGGACATAATGTTACACATCCAGTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CAA 90 bp | ACAGGGGAATATGGGCATCTGCTAACCTCAGTCACAAAGTTACAGTGTTTTGAAATAAGCAAATATTTCTaGTCTACAGGCGCGATCTAT | + |
Preference number: 5 (lower is better) Translates to: TGEYGHLLTSVTKLQCFEISKYF*STGAIY Trigger: ATAGATCGCGCCTGTAGACAAGAAATATTTGCTTAT...TTCAAAACACTGTAACTTTGTGACTGAGGTTAGCAGATGCCCATATTCCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123262.8 |
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CDS-3UTR CAA 90 bp | TTTTCTCATACGTTCCATCCCGACTACAGCGTCCCAGTTTTCAGTTTCTTGAATATAAGCAAATATTTCTaGTCTACAGGCGCGATCTAT | + |
Preference number: 5 (lower is better) Translates to: FSHTFHPDYSVPVFSFLNISKYF*STGAIY Trigger: ATAGATCGCGCCTGTAGACAAGAAATATTTGCTTAT...ATTCAAGAAACTGAAAACTGGGACGCTGTAGTCGGGATGGAACGTATGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS-3UTR CAA 90 bp | CTATCATTATCAAAATCCACTCAGGGTACAGAATGCATAGGACTTGGAGAAAAGATAAGCAAATATTTCTaGTCTACAGGCGCGATCTAT | + |
Preference number: 5 (lower is better) Translates to: LSLSKSTQGTECIGLGEKISKYF*STGAIY Trigger: ATAGATCGCGCCTGTAGACAAGAAATATTTGCTTAT...CTTTTCTCCAAGTCCTATGCATTCTGTACCCTGAGTGGATTTTGATAATGATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS GCA 72 bp | TCCGGAAAGCTGCTGTGGCTCGCACTGGGGACTGGGTaGTGTGGGCCACCCGCACCGCCGCCCTGCAGGTCC | + |
Preference number: 6 (lower is better) Translates to: SGKLLWLALGTG*CGPPAPPPCRS Trigger: GGACCTGCAGGGCGGCGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCAGCTTTCCGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 72 bp | AAAGCTGCTGTGGCTCGCACTGGGGACTGGGTGCTGTaGGCCACCCGCACCGCCGCCCTGCAGGTCCTCCGC | + |
Preference number: 6 (lower is better) Translates to: KAAVARTGDWVL*ATRTAALQVLR Trigger: GCGGAGGACCTGCAGGGCGGCGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCAGCTTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 72 bp | GAAGCTCGTATTCCGGAAAGCTGCTGTGGCTCGCACTaGGGACTGGGTGCTGTGGGCCACCCGCACCGCCGC | + |
Preference number: 6 (lower is better) Translates to: EARIPESCCGSH*GLGAVGHPHRR Trigger: GCGGCGGTGCGGGTGGCCCACAGCACCCAGTCCCCAGTGCGAGCCACAGCAGCTTTCCGGAATACGAGCTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 72 bp | TGCTCGGCTGCCTGCGGTTCGCTCAGCGACAAATCCTaGGCCCCTAGCCGGCCACGCCATAGCTCCCCAAAG | + |
Preference number: 6 (lower is better) Translates to: CSAACGSLSDKS*APSRPRHSSPK Trigger: CTTTGGGGAGCTATGGCGTGGCCGGCTAGGGGCCCAGGATTTGTCGCTGAGCGAACCGCAGGCAGCCGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 72 bp | TGCTGCCTCCAGACTGCAGCCCAGATCGCTGGCTACTaGAGCATCCTCAAAGCCGTCGTTGGATGCCCCTCC | + |
Preference number: 6 (lower is better) Translates to: CCLQTAAQIAGY*SILKAVVGCPS Trigger: GGAGGGGCATCCAACGACGGCTTTGAGGATGCTGCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 72 bp | CGCACACGACCCTCAGCTCTGCTGCTGCCTCCAGACTaGAGCCCAGATCGCTGGCTACTGCAGCATCCTCAA | + |
Preference number: 6 (lower is better) Translates to: RTRPSALLLPPD*SPDRWLLQHPQ Trigger: TTGAGGATGCTGCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 72 bp | AGCCGGCCACGCCATAGCTCCCCAAAGGAGCCCACATaGAACACGCGCGTGTGCAACTCGGGAAGCTCGTAT | + |
Preference number: 6 (lower is better) Translates to: SRPRHSSPKEPT*NTRVCNSGSSY Trigger: ATACGAGCTTCCCGAGTTGCACACGCGCGTGTTCCATGTGGGCTCCTTTGGGGAGCTATGGCGTGGCCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 72 bp | TTTATCAAGGCCGCACACGACCCTCAGCTCTGCTGCTaGCTCCAGACTGCAGCCCAGATCGCTGGCTACTGC | + |
Preference number: 6 (lower is better) Translates to: FIKAAHDPQLCC*LQTAAQIAGYC Trigger: GCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTGTGCGGCCTTGATAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 72 bp | CAGTTTATCAAGGCCGCACACGACCCTCAGCTCTGCTaGTGCCTCCAGACTGCAGCCCAGATCGCTGGCTAC | + |
Preference number: 6 (lower is better) Translates to: QFIKAAHDPQLC*CLQTAAQIAGY Trigger: GTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGCTGAGGGTCGTGTGCGGCCTTGATAAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS CCA 72 bp | GCTCTGCTGCTGCCTCCAGACTGCAGCCCAGATCGCTaGCTACTGCAGCATCCTCAAAGCCGTCGTTGGATG | + |
Preference number: 6 (lower is better) Translates to: ALLLPPDCSPDR*LLQHPQSRRWM Trigger: CATCCAACGACGGCTTTGAGGATGCTGCAGTAGCCAGCGATCTGGGCTGCAGTCTGGAGGCAGCAGCAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS GCA 72 bp | AGCTCCCCAAAGGAGCCCACATGGAACACGCGCGTGTaGAACTCGGGAAGCTCGTATTCCGGAAAGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: SSPKEPTWNTRV*NSGSSYSGKLL Trigger: CAGCAGCTTTCCGGAATACGAGCTTCCCGAGTTGCACACGCGCGTGTTCCATGTGGGCTCCTTTGGGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000137512.8 ENSMUST00000143533.8 |
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CDS TCA 72 bp | TCACACATAAAGTCACTAGGTCAGTGTTCTCTGGGATaGCTTCCGGGTCTTCATCTTCCCCGAGGCATCTCA | + |
Preference number: 6 (lower is better) Translates to: SHIKSLGQCSLG*LPGLHLPRGIS Trigger: TGAGATGCCTCGGGGAAGATGAAGACCCGGAAGTCATCCCAGAGAACACTGACCTAGTGACTTTATGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030206.10 ENSMUST00000071544.11 ENSMUST00000123262.8 ENSMUST00000124856.8 ENSMUST00000143533.8 |
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CDS TCA 72 bp | GATTCCATAAAGTCACTAGGTCAGTGTTCTCTGGGATaGCTTCCGGGTCTTCATCTTCCCCGAGGCATCTCA | + |
Preference number: 6 (lower is better) Translates to: DSIKSLGQCSLG*LPGLHLPRGIS Trigger: TGAGATGCCTCGGGGAAGATGAAGACCCGGAAGTCATCCCAGAGAACACTGACCTAGTGACTTTATGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137512.8 |