Pregenerated sensors for SNAPC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011837Ensembl transcript IDs: ENSMUST00000011981.5, ENSMUST00000208110.2, ENSMUST00000208316.2, ENSMUST00000208459.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTGGCCCTGTGGAGCCAGTCCCTCCATCTTCAGTCCCAGGCCTaGGCCTCTTCTCTCCAGGGAGAGCGGTCTGGGGAGCCATCAGTT | + |
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Preference number: 1 (lower is better) Translates to: PLALWSQSLHLQSQA*ASSLQGERSGEPSV Trigger: AACTGATGGCTCCCCAGACCGCTCTCCCTGGAGAGAAGAGGCCCAGGCCTGGGACTGAAGATGGAGGGACTGGCTCCACAGGGCCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR GCA 90 bp | GAGGCCCAGGGGTACCAGGAACGGGTTCAGTGGGCAGATCCCAACTaGTTTCCAGGCCAGCCTCGGCTCTATGGGCTCAGAAGCTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: EAQGYQERVQWADPN*FPGQPRLYGLRSLR Trigger: CCTCAAGCTTCTGAGCCCATAGAGCCGAGGCTGGCCTGGAAAGCAGTTGGGATCTGCCCACTGAACCCGTTCCTGGTACCCCTGGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR CCA 90 bp | CTCTATGGGCTCAGAAGCTTGAGGACTAGCTTGGTCAGGCTCCTCTaGCCCTGTGGAGCCAGTCCCTCCATCTTCAGTCCCAGGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LYGLRSLRTSLVRLL*PCGASPSIFSPRPG Trigger: CCCAGGCCTGGGACTGAAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCATAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR GCA 90 bp | GAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTaGTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: EHCVRKSTIKFQHQW*WTDVLGKTQHISSA Trigger: AGCAGACGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR CCA 90 bp | CACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTaGACTGATGTTCTGGGCAAAACTCAGCACATCTCGTCTGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: HCVRKSTIKFQHQWC*TDVLGKTQHISSAV Trigger: TACAGCAGACGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR CCA 90 bp | GCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTaGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGTCT | + |
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Preference number: 1 (lower is better) Translates to: AEHCVRKSTIKFQHQ*CWTDVLGKTQHISS Trigger: AGACGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR TCA 90 bp | CTAAGGCTGCTGGTGTATACAGCATCTGAAGGCTTAGCCTATGGCTaGACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LRLLVYTASEGLAYG*TLCQEVHNQVPTPV Trigger: CACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCATAGGCTAAGCCTTCAGATGCTGTATACACCAGCAGCCTTAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR TCA 90 bp | CACAATTGTGCTTCACTTTCTAAGGCTGCTGGTGTATACAGCATCTaGAGGCTTAGCCTATGGCTGAACACTGTGTCAGGAAGTCCACAA | + |
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Preference number: 1 (lower is better) Translates to: HNCASLSKAAGVYSI*RLSLWLNTVSGSPQ Trigger: TTGTGGACTTCCTGACACAGTGTTCAGCCATAGGCTAAGCCTTCAGATGCTGTATACACCAGCAGCCTTAGAAAGTGAAGCACAATTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGGCCTGGCTCACGAGGCCCAGGGGTACCAGGAACGGGTTCAGTGGGCCAGCCTCGGCTCTATaGGCTCAGAAGCTTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GLGAWLTRPRGTRNGFSGPASAL*AQKLED Trigger: GTCCTCAAGCTTCTGAGCCCATAGAGCCGAGGCTGG...CCCACTGAACCCGTTCCTGGTACCCCTGGGCCTCGTGAGCCAGGCCCCCAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGCTCACGAGGCCCAGGGGTACCAGGAACGGGTTCAGTGGGCAGATCCCAGCTCCTCTGGCCCTGTaGAGCCAGTCCCTCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: AWLTRPRGTRNGFSGQIPAPLAL*SQSLHL Trigger: AAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGC...TGGGATCTGCCCACTGAACCCGTTCCTGGTACCCCTGGGCCTCGTGAGCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCAGTGGGCAGATCCCAACTGCTTTCCAGGCCAGCCTCGGCTCTATGGGCTTTGGTCAGGCTCCTCTaGCCCTGTGGAGCCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GSVGRSQLLSRPASALWALVRLL*PCGASP Trigger: GGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAA...AGCCCATAGAGCCGAGGCTGGCCTGGAAAGCAGTTGGGATCTGCCCACTGAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR CAA 90 bp | CCCAACTGCTTTCCAGGCCAGCCTCGGCTCTATGGGCTCAGAAGCTaGAGGACTAGCTTGGTCAGGCTCCTCTGGCCCTGTGGAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PNCFPGQPRLYGLRS*RTSLVRLLWPCGAS Trigger: ACTGGCTCCACAGGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCATAGAGCCGAGGCTGGCCTGGAAAGCAGTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCACCAGTGGTGCTGGACTaGTGTTCTGGGCAAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: PQSTSAGILLCVEPSVSPPVVLD*CSGQNS Trigger: TGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGG...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR CAA 90 bp | GGGCTAGAGACACTTGCCCCAATCTACCAGTGCAGGAATCCTGCTTaGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTCATCACAATTG | + |
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Preference number: 2 (lower is better) Translates to: GLETLAPIYQCRNPA*CRAFRLSSPHSSQL Trigger: CAATTGTGATGAATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGGCAAGTGTCTCTAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAAAGTTCCAACACCAGTaGTGCTGGACTGATGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PQSTSAGILLCVEPSVSPKFQHQ*CWTDVL Trigger: CAGAACATCAGTCCAGCACCACTGGTGTTGGAACTT...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTCATCACAATTGTGCGCTGGACTGATGTTCTaGGCAAAACTCAGCACATCT | + |
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Preference number: 2 (lower is better) Translates to: PALCRAFRLSSPHSSQLCAGLMF*AKLSTS Trigger: AGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGC...GCACAATTGTGATGAATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGGCTGGACTGATGTTCTaGGCAAAACTCAGCACATCT | + |
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Preference number: 2 (lower is better) Translates to: PMAEHCVRKSTIKFQHQWAGLMF*AKLSTS Trigger: AGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGC...CCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGAAGTTCCAACACCAGTaGTGCTGGACTGATGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FIEGYRTPQEKVKRTIQRKFQHQ*CWTDVL Trigger: CAGAACATCAGTCCAGCACCACTGGTGTTGGAACTT...CCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGGGGGCCTGGCTCACGAGGCCCAGGGGTACCAGGAACGGGTTCAGTGGGAGCTTGAGGACTAGCTaGGTCAGGCTCCTCTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GLGAWLTRPRGTRNGFSGSLRTS*VRLLWP Trigger: GGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCT...CCCACTGAACCCGTTCCTGGTACCCCTGGGCCTCGTGAGCCAGGCCCCCAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCCTGGCTCACGAGGCCCAGGGGTACCAGGAACGGGTTCAGTGGGCAGATCCTATGGGCTCAGAAGCTaGAGGACTAGCTTGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: GPGSRGPGVPGTGSVGRSYGLRS*RTSLVR Trigger: CCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCATA...GGATCTGCCCACTGAACCCGTTCCTGGTACCCCTGGGCCTCGTGAGCCAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR TCA 72 bp | TTCCAGGCCAGCCTCGGCTCTATGGGCTCAGAAGCTTaGGGACTAGCTTGGTCAGGCTCCTCTGGCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FQASLGSMGSEA*GLAWSGSSGPV Trigger: CACAGGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCATAGAGCCGAGGCTGGCCTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR GCA 72 bp | GGGTACCAGGAACGGGTTCAGTGGGCAGATCCCAACTaGTTTCCAGGCCAGCCTCGGCTCTATGGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: GYQERVQWADPN*FPGQPRLYGLR Trigger: TCTGAGCCCATAGAGCCGAGGCTGGCCTGGAAAGCAGTTGGGATCTGCCCACTGAACCCGTTCCTGGTACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR CCA 72 bp | CTCAGAAGCTTGAGGACTAGCTTGGTCAGGCTCCTCTaGCCCTGTGGAGCCAGTCCCTCCATCTTCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LRSLRTSLVRLL*PCGASPSIFSP Trigger: GGGACTGAAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCTTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR GCA 72 bp | CACAGTGGGCTAGAGACACTTGCCCCAATCTACCAGTaGAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: HSGLETLAPIYQ*RNPALCRAFRL Trigger: GAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGGCAAGTGTCTCTAGCCCACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR TCA 72 bp | GTCCACAATCAAGTTCCAACACCAGTGGTGCTGGACTaGTGTTCTGGGCAAAACTCAGCACATCTCGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: VHNQVPTPVVLD*CSGQNSAHLVC Trigger: GCAGACGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR GCA 72 bp | GTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTaGTGGACTGATGTTCTGGGCAAAACTCAGCACATC | + |
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Preference number: 3 (lower is better) Translates to: VRKSTIKFQHQW*WTDVLGKTQHI Trigger: GATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR CCA 72 bp | TCAAGTTCCAACACCAGTGGTGCTGGACTGATGTTCTaGGCAAAACTCAGCACATCTCGTCTGCTGTACTCT | + |
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Preference number: 3 (lower is better) Translates to: SSSNTSGAGLMF*AKLSTSRLLYS Trigger: AGAGTACAGCAGACGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR CCA 72 bp | AGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTaGACTGATGTTCTGGGCAAAACTCAGCACATCTCG | + |
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Preference number: 3 (lower is better) Translates to: RKSTIKFQHQWC*TDVLGKTQHIS Trigger: CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR TCA 72 bp | GCTTCACTTTCTAAGGCTGCTGGTGTATACAGCATCTaGAGGCTTAGCCTATGGCTGAACACTGTGTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: ASLSKAAGVYSI*RLSLWLNTVSG Trigger: TCCTGACACAGTGTTCAGCCATAGGCTAAGCCTTCAGATGCTGTATACACCAGCAGCCTTAGAAAGTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| 3UTR TCA 72 bp | CTGGTGTATACAGCATCTGAAGGCTTAGCCTATGGCTaGACACTGTGTCAGGAAGTCCACAATCAAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LVYTASEGLAYG*TLCQEVHNQVP Trigger: TGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCATAGGCTAAGCCTTCAGATGCTGTATACACCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR GCA 90 bp | CTCGTCTGCTGTACTCTTCACCTCGAAGGGCTGGGGGCCTGGCTCACGAGGCCCGTTCCAGCAGGGCCGTaGAAGGCAGGTGGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: LVCCTLHLEGLGAWLTRPVPAGP*KAGGTV Trigger: AACTGTCCCACCTGCCTTGCACGGCCCTGCTGGAAC...GGGCCTCGTGAGCCAGGCCCCCAGCCCTTCGAGGTGAAGAGTACAGCAGACGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCCCAGGCCTGGGCCTCTTCTCTCCAGGGAGAGCGGTCTGGGGAGCCAGAGAGCTCAGGGCCATaGCCACCTCTTCAGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQSQAWASSLQGERSGEPESSGP*PPLQMQ Trigger: CTGCATCTGAAGAGGTGGCCATGGCCCTGAGCTCTC...TGGCTCCCCAGACCGCTCTCCCTGGAGAGAAGAGGCCCAGGCCTGGGACTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR CCA 90 bp | CTTCACCTCGAAGGGCTGGGGGCCTGGCTCACGAGGCCCAGGGGTACCAGGAACGTGGGACAGTTCCTCTaGAAGTGCCATGAGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LHLEGLGAWLTRPRGTRNVGQFL*KCHEQV Trigger: AACCTGCTCATGGCACTTCCAGAGGAACTGTCCCAC...GTTCCTGGTACCCCTGGGCCTCGTGAGCCAGGCCCCCAGCCCTTCGAGGTGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| 3UTR CAA 72 bp | CCTCGGCTCTATGGGCTCAGAAGCTTGAGGACTAGCTaGGTCAGGCTCCTCTGGCCCTGTGGAGCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PRLYGLRSLRTS*VRLLWPCGASP Trigger: GGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCATAGAGCCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR CCA 90 bp | GCTTGGTCAGGCTCCTCTGGCCCTGTGGAGCCAGTCCCTCCATCTTCAGTCCCAGCCGTGCAAGGCAGGTaGGACAGTTCCTCTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: AWSGSSGPVEPVPPSSVPAVQGR*DSSSGS Trigger: ACTTCCAGAGGAACTGTCCCACCTGCCTTGCACGGC...TGGGACTGAAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR CCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGAAGGGCTGGGGGCCTaGCTCACGAGGCCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PQSTSAGILLCVEPSVSPEGLGA*LTRPRG Trigger: ACCCCTGGGCCTCGTGAGCCAGGCCCCCAGCCCTTC...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGTCCACTGAAGGGCTGGGGGCCTaGCTCACGAGGCCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: EGYRTPQEKVKRTIQRSTEGLGA*LTRPRG Trigger: ACCCCTGGGCCTCGTGAGCCAGGCCCCCAGCCCTTC...AGTGGACCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR GCA 90 bp | TGGCTCACGAGGCCCAGGGGTACCAGGAACGGGTTCAGTGGGCAGATCCCAACTGGCCACCTCTTCAGATaGAGGATCCTTCTGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: WLTRPRGTRNGFSGQIPTGHLFR*RILLPI Trigger: GATGGGCAGAAGGATCCTGCATCTGAAGAGGTGGCC...AGTTGGGATCTGCCCACTGAACCCGTTCCTGGTACCCCTGGGCCTCGTGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR TCA 90 bp | ATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCAGGGTCAGGGACAGTaGCCTCTGAGGCAAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IYQCRNPALCRAFRLSSPQGQGQ*PLRQGQ Trigger: CTGGCCTTGCCTCAGAGGTCACTGTCCCTGACCCTG...AGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
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| CDS-3UTR GCA 90 bp | GCTTGGTCAGGCTCCTCTGGCCCTGTGGAGCCAGTCCCTCCATCTTCAGTCCCACAGTTCCTCTGGAAGTaGCATGAGCAGGTTAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: AWSGSSGPVEPVPPSSVPQFLWK*HEQVKD Trigger: GTCCTTAACCTGCTCATGGCACTTCCAGAGGAACTG...TGGGACTGAAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR TCA 90 bp | GAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGTCCACTTGGCCCCGCCGAGCCTaGAGTAGTCTCAGTAGATGC | + |
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Preference number: 4 (lower is better) Translates to: EGYRTPQEKVKRTIQRSTWPRRA*SSLSRC Trigger: GCATCTACTGAGACTACTTCAGGCTCGGCGGGGCCA...AGTGGACCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR TCA 90 bp | TACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTGGCCCCGCCGAGCCTaGAGTAGTCTCAGTAGATGC | + |
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Preference number: 4 (lower is better) Translates to: YQCRNPALCRAFRLSSPHWPRRA*SSLSRC Trigger: GCATCTACTGAGACTACTTCAGGCTCGGCGGGGCCA...ATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR TCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCATGGAGTGCAGGAGGCTaGGGGGTTCTGCAGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PQSTSAGILLCVEPSVSPWSAGG*GVLQQQ Trigger: TTGCTGCTGCAGAACCCCTCAGCCTCCTGCACTCCA...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
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| CDS-3UTR GCA 90 bp | AGGACTAGCTTGGTCAGGCTCCTCTGGCCCTGTGGAGCCAGTCCCTCCATCTTCGATGCAGGATCCTTCTaGCCATCTTGGTTGCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: RTSLVRLLWPCGASPSIFDAGSF*PSWLLK Trigger: CTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATC...GAAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAAGCTAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGTCCACTGTTCCAGCAGGGCCGTaGAAGGCAGGTGGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: EGYRTPQEKVKRTIQRSTVPAGP*KAGGTV Trigger: AACTGTCCCACCTGCCTTGCACGGCCCTGCTGGAAC...AGTGGACCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CCA 90 bp | TACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATGAGAGCTCAGGGCCATaGCCACCTCTGGAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YQCRNPALCRAFRLSSPHESSGP*PPLEEK Trigger: CTTCTCCTCCAGAGGTGGCCATGGCCCTGAGCTCTC...ATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCACTTCAGTCCCAGGCCTaGGCCTCTTCTCTCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQSTSAGILLCVEPSVSPLQSQA*ASSLQG Trigger: TCCCTGGAGAGAAGAGGCCCAGGCCTGGGACTGAAG...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCTCCTCTGGCCCTGTaGAGCCAGTCCCTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQSTSAGILLCVEPSVSPAPLAL*SQSLHL Trigger: AAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGC...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTCATCATTGGTCAGGCTCCTCTaGCCCTGTGGAGCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRNPALCRAFRLSSPHSSLVRLL*PCGASP Trigger: GGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAA...TGATGAATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGGGAGCGGTGTTCCTTaGTGCCTTGGCCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLNTVSGSPQSSSNTSGAGSGVP*CLGPSL Trigger: CAGAGAGGGGCCAAGGCATCAAGGAACACCGCTCCC...AGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR GCA 90 bp | TACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATGAGGCTGAGGGGTTCTaGAGCAGCAATGGTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YQCRNPALCRAFRLSSPHEAEGF*SSNGEH Trigger: GTGCTCACCATTGCTGCTGCAGAACCCCTCAGCCTC...ATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | ATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTGGTCAGCAGCAGTCATaGGGACAGGCCCAGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYQCRNPALCRAFRLSSPGQQQS*GQAQNL Trigger: AAGGTTCTGGGCCTGTCCCCATGACTGCTGCTGACC...AGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | TTCCAACACCAGTGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGAGCCAGGGACTTGGTTaGGGCATCAGGGTCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQHQWCWTDVLGKTQHISSQGLG*GIRVRD Trigger: GTCCCTGACCCTGATGCCCCAACCAAGTCCCTGGCT...CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | TGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTCATCAGCTCCTCTGGCCCTGTaGAGCCAGTCCCTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRNPALCRAFRLSSPHSSAPLAL*SQSLHL Trigger: AAGATGGAGGGACTGGCTCCACAGGGCCAGAGGAGC...TGATGAATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | GAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGGACTTTGGTCAGGCTCCTCTaGCCCTGTGGAGCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EHCVRKSTIKFQHQWCWTLVRLL*PCGASP Trigger: GGGACTGGCTCCACAGGGCCAGAGGAGCCTGACCAA...AGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | ATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCCAGCCTCGGCTCTATaGGCTCAGAAGCTTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IYQCRNPALCRAFRLSSPPASAL*AQKLED Trigger: GTCCTCAAGCTTCTGAGCCCATAGAGCCGAGGCTGG...AGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGGGGAGCGGTGTTCCTTaGTGCCTTGGCCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIEGYRTPQEKVKRTIQRGSGVP*CLGPSL Trigger: CAGAGAGGGGCCAAGGCATCAAGGAACACCGCTCCC...CCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAACACCAGTGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGCTGCAGCAGCAATGGTaGGCACCTGGGAGAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQHQWCWTDVLGKTQHISLQQQW*APGRKL Trigger: CAGCTTTCTCCCAGGTGCTCACCATTGCTGCTGCAG...CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCAGGGACAGTGACCTCTaGGGCAAGGCCAGAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MAEHCVRKSTIKFQHQWCRDSDL*GKARGL Trigger: GAGACCTCTGGCCTTGCCTCAGAGGTCACTGTCCCT...GCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGTCCACTCACCTGGGAGAAAGCTaGAGTCAGGGCTTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGYRTPQEKVKRTIQRSTHLGES*SQGFLH Trigger: ATGGAGGAAGCCCTGACTGCAGCTTTCTCCCAGGTG...AGTGGACCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | TTCCAACACCAGTGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGCCCCTCTCTGCCACCTaGCTGCATCTTCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQHQWCWTDVLGKTQHISPLSAT*LHLLNG Trigger: GCCATTCAGAAGATGCAGCCAGGTGGCAGAGAGGGG...CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAACACCAGTGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGTGTTCCTTGATGCCTTaGCCCCTCTCTGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQHQWCWTDVLGKTQHISCSLMP*PLSATW Trigger: CCAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACA...CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGTCCACTGCAATGGTGAGCACCTaGGAGAAAGCTGCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGYRTPQEKVKRTIQRSTAMVST*EKAAVR Trigger: CCTGACTGCAGCTTTCTCCCAGGTGCTCACCATTGC...AGTGGACCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCCTTTGTGGGCTTGCCTaGCCTGGAGTGCAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAEHCVRKSTIKFQHQWCLCGLA*PGVQEA Trigger: AGCCTCCTGCACTCCAGGCCAGGCAAGCCCACAAAG...GCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | CCTATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGCTTCAGTCCCAGGCCTaGGCCTCTTCTCTCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PMAEHCVRKSTIKFQHQWLQSQA*ASSLQG Trigger: TCCCTGGAGAGAAGAGGCCCAGGCCTGGGACTGAAG...CCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGGCCTTGGCCCCTCTCTaGCACCTGGCTGCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIEGYRTPQEKVKRTIQRALAPL*HLAASS Trigger: AGAAGATGCAGCCAGGTGGCAGAGAGGGGCCAAGGC...CCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTCTCTCCAGCCCTCATTCATCACAATTGTGCTTCACTTTCTAAGGCTGGCCTTGGCCCCTCTCTaGCACCTGGCTGCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLQPSFITIVLHFLRLALAPL*HLAASS Trigger: AGAAGATGCAGCCAGGTGGCAGAGAGGGGCCAAGGC...CAGCCTTAGAAAGTGAAGCACAATTGTGATGAATGAGGGCTGGAGAGACGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCACCCAGAACCTTCAGATaGAGGATCCTTCTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PQSTSAGILLCVEPSVSPPRTFR*RILLPI Trigger: GATGGGCAGAAGGATCCTGCATCTGAAGGTTCTGGG...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | TTCCAACACCAGTGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGCAAGGTCTCTCTCTGTaGAGGATCCAGCCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FQHQWCWTDVLGKTQHISQGLSL*RIQPGT Trigger: AGTCCCTGGCTGGATCCTCCACAGAGAGAGACCTTG...CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
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| CDS-3UTR CCA 90 bp | TACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATGGCCATGGCCACCTCTaGAGGAGAAGGAAAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YQCRNPALCRAFRLSSPHGHGHL*RRRKGI Trigger: AATACCTTTCCTTCTCCTCCAGAGGTGGCCATGGCC...ATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGGAGAGCTCAGGGCCATaGCCACCTCTGGAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIEGYRTPQEKVKRTIQRESSGP*PPLEEK Trigger: CTTCTCCTCCAGAGGTGGCCATGGCCCTGAGCTCTC...CCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CCA 90 bp | GAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGGACTGCCGTGCAAGGCAGGTaGGACAGTTCCTCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EHCVRKSTIKFQHQWCWTAVQGR*DSSSGS Trigger: ACTTCCAGAGGAACTGTCCCACCTGCCTTGCACGGC...AGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CCA 90 bp | GTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGGACTGATGTTCTGGCCGTGCAAGGCAGGTaGGACAGTTCCTCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRKSTIKFQHQWCWTDVLAVQGR*DSSSGS Trigger: ACTTCCAGAGGAACTGTCCCACCTGCCTTGCACGGC...CAGAACATCAGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CCA 90 bp | CCCCAATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCACAGGAACGGGTTCAGTaGGCAGATCCCAACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PQSTSAGILLCVEPSVSPQERVQ*ADPNCF Trigger: AAAGCAGTTGGGATCTGCCCACTGAACCCGTTCCTG...TGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGATTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCATGGGCTCAGAAGCTTaGGGACTAGCTTGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MAEHCVRKSTIKFQHQWCMGSEA*GLAWSG Trigger: GCCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCAT...GCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGCCCCTCTCTGCCACCTaGCTGCATCTTCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIEGYRTPQEKVKRTIQRPLSAT*LHLLNG Trigger: GCCATTCAGAAGATGCAGCCAGGTGGCAGAGAGGGG...CCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCGTCTCTCCAGCCCTCATTCATCACAATTGTGCTTCACTTTCTAAGGCTGTGTTCCTTGATGCCTTaGCCCCTCTCTGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLQPSFITIVLHFLRLCSLMP*PLSATW Trigger: CCAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACA...CAGCCTTAGAAAGTGAAGCACAATTGTGATGAATGAGGGCTGGAGAGACGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CCA 90 bp | TTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGATCCAGCCAGGGACTTaGTTGGGGCATCAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIEGYRTPQEKVKRTIQRIQPGT*LGHQGQ Trigger: CTGACCCTGATGCCCCAACCAAGTCCCTGGCTGGAT...CCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CCA 90 bp | TGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTCATCAGTGGGACAGTTCCTCTaGAAGTGCCATGAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CRNPALCRAFRLSSPHSSVGQFL*KCHEQV Trigger: AACCTGCTCATGGCACTTCCAGAGGAACTGTCCCAC...TGATGAATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGCCAGCCTCGGCTCTATaGGCTCAGAAGCTTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFIEGYRTPQEKVKRTIQPASAL*AQKLED Trigger: GTCCTCAAGCTTCTGAGCCCATAGAGCCGAGGCTGG...CTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTCATCACAATTGTGCCAGGAACGGGTTCAGTaGGCAGATCCCAACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PALCRAFRLSSPHSSQLCQERVQ*ADPNCF Trigger: AAAGCAGTTGGGATCTGCCCACTGAACCCGTTCCTG...GCACAATTGTGATGAATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGATGGGCTCAGAAGCTTaGGGACTAGCTTGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFIEGYRTPQEKVKRTIQMGSEA*GLAWSG Trigger: GCCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCAT...CTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAACACCAGTGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGTCTGCCCATCTTGGTTaGTCAAGAACACCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQHQWCWTDVLGKTQHISSAHLG*SRTPVP Trigger: AGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGA...CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR GCA 90 bp | TGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGTCTGCTGTACTCGATGCAGGATCCTTCTaGCCATCTTGGTTGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WCWTDVLGKTQHISSAVLDAGSF*PSWLLK Trigger: CTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATC...GAGTACAGCAGACGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR GCA 90 bp | TTCCAACACCAGTGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGCAGTTCCTCTGGAAGTaGCATGAGCAGGTTAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQHQWCWTDVLGKTQHISQFLWK*HEQVKD Trigger: GTCCTTAACCTGCTCATGGCACTTCCAGAGGAACTG...CGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCACTGGTGTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCGTGGGACAGTTCCTCTaGAAGTGCCATGAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MAEHCVRKSTIKFQHQWCVGQFL*KCHEQV Trigger: AACCTGCTCATGGCACTTCCAGAGGAACTGTCCCAC...GCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR TCA 90 bp | ATCTACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTTGGGGAGCCATCAGTTaGGCATATGTTTTGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: IYQCRNPALCRAFRLSSPWGAIS*AYVLVI Trigger: TATGACCAAAACATATGCTCAACTGATGGCTCCCCA...AGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCGTCTCTCCAGCCCTCATTCATCACAATTGTGCTTCACTTTCTAAGGCTGGGCCATGGCCACCTCTaGAGGAGAAGGAAAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLQPSFITIVLHFLRLGHGHL*RRRKGI Trigger: AATACCTTTCCTTCTCCTCCAGAGGTGGCCATGGCC...CAGCCTTAGAAAGTGAAGCACAATTGTGATGAATGAGGGCTGGAGAGACGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTCAGTTCCTCTGGAAGTaGCATGAGCAGGTTAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLWLNTVSGSPQSSSNTSQFLWK*HEQVKD Trigger: GTCCTTAACCTGCTCATGGCACTTCCAGAGGAACTG...ACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCATAGGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGGGGAGCCATCAGTTaGGCATATGTTTTGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: MAEHCVRKSTIKFQHQWCWGAIS*AYVLVI Trigger: TATGACCAAAACATATGCTCAACTGATGGCTCCCCA...GCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS CCA 90 bp | GGCTGGGAGCGGTGTTCCTTGATGCCTTGGCCCCTCTCTGCCACCTaGCTGCATCTTCTGAATGGCCTCTCGAACCACCCGGCCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWERCSLMPWPLSAT*LHLLNGLSNHPALE Trigger: CTCAAGGGCCGGGTGGTTCGAGAGGCCATTCAGAAGATGCAGCCAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACACCGCTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS TCA 90 bp | AGCCAGGGACTTGGTTGGGGCATCAGGGTCAGGGACAGTGACCTCTaGGGCAAGGCCAGAGGTCTCAGGGTTGGCTCCAGAGGCCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQGLGWGIRVRDSDL*GKARGLRVGSRGLR Trigger: CCTAAGGCCTCTGGAGCCAACCCTGAGACCTCTGGCCTTGCCTCAGAGGTCACTGTCCCTGACCCTGATGCCCCAACCAAGTCCCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
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| CDS TCA 90 bp | AGGATCCAGCCAGGGACTTGGTTGGGGCATCAGGGTCAGGGACAGTaGCCTCTGAGGCAAGGCCAGAGGTCTCAGGGTTGGCTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RIQPGTWLGHQGQGQ*PLRQGQRSQGWLQR Trigger: CCTCTGGAGCCAACCCTGAGACCTCTGGCCTTGCCTCAGAGGTCACTGTCCCTGACCCTGATGCCCCAACCAAGTCCCTGGCTGGATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
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| CDS TCA 90 bp | CTGGGCCTCTTCTCTCCAGGGAGAGCGGTCTGGGGAGCCATCAGTTaGGCATATGTTTTGGTCATATGTTCCAGCAGGGCCGTGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGLFSPGRAVWGAIS*AYVLVICSSRAVQG Trigger: GCCTTGCACGGCCCTGCTGGAACATATGACCAAAACATATGCTCAACTGATGGCTCCCCAGACCGCTCTCCCTGGAGAGAAGAGGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 ENSMUST00000208459.2 |
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| CDS GCA 90 bp | AGATGCAGGATCCTTCTGCCCATCTTGGTTGCTCAAGAACACCAGTaGCTTTCCACGGGCCTTTGTGGGCTTGCCTGGCCTGGAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCRILLPILVAQEHQ*LSTGLCGLAWPGVQ Trigger: CTGCACTCCAGGCCAGGCAAGCCCACAAAGGCCCGTGGAAAGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
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| CDS GCA 90 bp | GCAGTCATGGGGACAGGCCCAGAACCTTCAGATGCAGGATCCTTCTaGCCATCTTGGTTGCTCAAGAACACCAGTGCCTTTCCACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVMGTGPEPSDAGSF*PSWLLKNTSAFPRA Trigger: GGCCCGTGGAAAGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATCTGAAGGTTCTGGGCCTGTCCCCATGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
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| CDS CCA 90 bp | CTCCAGGGAGAGCGGTCTGGGGAGCCATCAGTTGAGCATATGTTTTaGTCATATGTTCCAGCAGGGCCGTGCAAGGCAGGTGGGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQGERSGEPSVEHMF*SYVPAGPCKAGGTV Trigger: AACTGTCCCACCTGCCTTGCACGGCCCTGCTGGAACATATGACCAAAACATATGCTCAACTGATGGCTCCCCAGACCGCTCTCCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 ENSMUST00000208459.2 |
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| CDS CCA 90 bp | AGGTTAAGGACCACAGCTGACTCAGCTGCTGAGAGCTCAGGGCCATaGCCACCTCTTCAGATGCAGGATCCTTCTGCCCATCTTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLRTTADSAAESSGP*PPLQMQDPSAHLGC Trigger: GCAACCAAGATGGGCAGAAGGATCCTGCATCTGAAGAGGTGGCCATGGCCCTGAGCTCTCAGCAGCTGAGTCAGCTGTGGTCCTTAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR CAA 90 bp | TACCAGTGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATGTGTTCCTTGATGCCTaGGCCCCTCTCTGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: YQCRNPALCRAFRLSSPHVFLDA*APLCHL Trigger: CAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACAC...ATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCACTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CAA 90 bp | CCTATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGCCTTTCCACGGGCCTTaGTGGGCTTGCCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PMAEHCVRKSTIKFQHQWPFHGP*WACLAW Trigger: CCAGGCCAGGCAAGCCCACAAAGGCCCGTGGAAAGG...CCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
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| CDS-3UTR CAA 90 bp | ACGGGTTCAGTGGGCAGATCCCAACTGCTTTCCAGGCCAGCCTCGGCTCTATGGATCCTTCTGCCCATCTaGGTTGCTCAAGAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGSVGRSQLLSRPASALWILLPI*VAQEHQ Trigger: CTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGAT...CCATAGAGCCGAGGCTGGCCTGGAAAGCAGTTGGGATCTGCCCACTGAACCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208110.2 |
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| CDS-3UTR CAA 90 bp | TGGTGCTGGACTGATGTTCTGGGCAAAACTCAGCACATCTCGTCTGCTGTACTCGTGTTCCTTGATGCCTaGGCCCCTCTCTGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: WCWTDVLGKTQHISSAVLVFLDA*APLCHL Trigger: CAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACAC...GAGTACAGCAGACGAGATGTGCTGAGTTTTGCCCAGAACATCAGTCCAGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CAA 90 bp | AGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGTCCACTGAGGTGGGGTCAGGGCTTCCTCCATaGGGCCTGTTAGTTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTPQEKVKRTIQRSTEVGSGLPP*GLLVSQ Trigger: CTGAGAAACTAACAGGCCCAATGGAGGAAGCCCTGA...CCCCACCTCAGTGGACCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CAA 90 bp | TGCAGGAATCCTGCTTTGTGTAGAGCCTTCCGTCTCTCCAGCCCTCATTCATCAAGCTTGAGGACTAGCTaGGTCAGGCTCCTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CRNPALCRAFRLSSPHSSSLRTS*VRLLWP Trigger: GGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCT...TGATGAATGAGGGCTGGAGAGACGGAAGGCTCTACACAAAGCAGGATTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGGGAGCGGTGTTCCTaGATGCCTTGGCCCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MAEHCVRKSTIKFQHQWCWERCS*MPWPLS Trigger: AGAGAGGGGCCAAGGCATCAAGGAACACCGCTCCCA...GCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGATCCAGCCAGGGACTaGGTTGGGGCATCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLNTVSGSPQSSSNTSGADPARD*VGASGS Trigger: TGACCCTGATGCCCCAACCAAGTCCCTGGCTGGATC...AGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CAA 90 bp | CCTATGGCTGAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGAGCTTGAGGACTAGCTaGGTCAGGCTCCTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PMAEHCVRKSTIKFQHQWSLRTS*VRLLWP Trigger: GGGCCAGAGGAGCCTGACCAAGCTAGTCCTCAAGCT...CCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTCAGCCATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS CCA 90 bp | GCATATGTTTTGGTCATATGTTCCAGCAGGGCCGTGCAAGGCAGGTaGGACAGTTCCTCTGGAAGTGCCATGAGCAGGTTAAGGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: AYVLVICSSRAVQGR*DSSSGSAMSRLRTT Trigger: TGTGGTCCTTAACCTGCTCATGGCACTTCCAGAGGAACTGTCCCACCTGCCTTGCACGGCCCTGCTGGAACATATGACCAAAACATATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 ENSMUST00000208459.2 |
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| CDS-3UTR CAA 90 bp | CTTCCGTCTCTCCAGCCCTCATTCATCACAATTGTGCTTCACTTTCTAAGGCTGTGGGAGCGGTGTTCCTaGATGCCTTGGCCCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSLQPSFITIVLHFLRLWERCS*MPWPLS Trigger: AGAGAGGGGCCAAGGCATCAAGGAACACCGCTCCCA...CAGCCTTAGAAAGTGAAGCACAATTGTGATGAATGAGGGCTGGAGAGACGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CAA 90 bp | GAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGAGGTCCACTTATGGGCTCAGAAGCTaGAGGACTAGCTTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGYRTPQEKVKRTIQRSTYGLRS*RTSLVR Trigger: CCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCATA...AGTGGACCTCTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS-3UTR CAA 90 bp | GAACACTGTGTCAGGAAGTCCACAATCAAGTTCCAACACCAGTGGTGCTGGACTATCCTTCTGCCCATCTaGGTTGCTCAAGAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: EHCVRKSTIKFQHQWCWTILLPI*VAQEHQ Trigger: CTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGAT...AGTCCAGCACCACTGGTGTTGGAACTTGATTGTGGACTTCCTGACACAGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011981.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTTATTGAGGGTTACAGGACACCCCAGGAAAAGGTGAAGAGAACCATCCAGTATGGGCTCAGAAGCTaGAGGACTAGCTTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFIEGYRTPQEKVKRTIQYGLRS*RTSLVR Trigger: CCTGACCAAGCTAGTCCTCAAGCTTCTGAGCCCATA...CTGGATGGTTCTCTTCACCTTTTCCTGGGGTGTCCTGTAACCCTCAATAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS CCA 72 bp | CGACAGATCTCGGCCTCGCTGCGGCCTCGCAGCTCCTaGGCCAGCTCCGCGGCGTCTGGCTCCGGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RQISASLRPRSS*ASSAASGSGWP Trigger: GGGCCAGCCGGAGCCAGACGCCGCGGAGCTGGCCCAGGAGCTGCGAGGCCGCAGCGAGGCCGAGATCTGTCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS TCA 72 bp | TCCGCGGCGTCTGGCTCCGGCTGGCCCCGCCGAGCCTaGAGTAGTCTCAGTAGATGCCGCATCTCGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAASGSGWPRRA*SSLSRCRISRG Trigger: CCCCCGCGAGATGCGGCATCTACTGAGACTACTTCAGGCTCGGCGGGGCCAGCCGGAGCCAGACGCCGCGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS GCA 72 bp | CCAAGCGGTGGGGCCCGTAGCTTCACCTACGTAGCGTaGTGGGACCCTCCGCCGTCTCTGCGGTGGCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PSGGARSFTYVA*WDPPPSLRWLH Trigger: ATGAAGCCACCGCAGAGACGGCGGAGGGTCCCAGCACGCTACGTAGGTGAAGCTACGGGCCCCACCGCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS TCA 72 bp | ATCCATACCTCTACCGGGGCTGGGAGCGGTGTTCCTTaGTGCCTTGGCCCCTCTCTGCCACCTGGCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: IHTSTGAGSGVP*CLGPSLPPGCI Trigger: GATGCAGCCAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACACCGCTCCCAGCCCCGGTAGAGGTATGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
||
| CDS TCA 72 bp | CCAGGGACTTGGTTGGGGCATCAGGGTCAGGGACAGTaGCCTCTGAGGCAAGGCCAGAGGTCTCAGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGTWLGHQGQGQ*PLRQGQRSQGW Trigger: CCAACCCTGAGACCTCTGGCCTTGCCTCAGAGGTCACTGTCCCTGACCCTGATGCCCCAACCAAGTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
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| CDS CCA 72 bp | CGGTGTTCCTTGATGCCTTGGCCCCTCTCTGCCACCTaGCTGCATCTTCTGAATGGCCTCTCGAACCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: RCSLMPWPLSAT*LHLLNGLSNHP Trigger: CGGGTGGTTCGAGAGGCCATTCAGAAGATGCAGCCAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS CAA 90 bp | GGGTCAGGGACAGTGACCTCTGAGGCAAGGCCAGAGGTCTCAGGGTaGGCTCCAGAGGCCTTAGGGTCAGAGACAGAAGCCTCACGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSGTVTSEARPEVSG*APEALGSETEASRV Trigger: TACTCGTGAGGCTTCTGTCTCTGACCCTAAGGCCTCTGGAGCCAACCCTGAGACCTCTGGCCTTGCCTCAGAGGTCACTGTCCCTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS GCA 72 bp | CTGGGAGCGGTGTTCCTTGATGCCTTGGCCCCTCTCTaGCACCTGGCTGCATCTTCTGAATGGCCTCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGAVFLDALAPL*HLAASSEWPLE Trigger: TTCGAGAGGCCATTCAGAAGATGCAGCCAGGTGGCAGAGAGGGGCCAAGGCATCAAGGAACACCGCTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 |
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| CDS CAA 72 bp | ACAGTGACCTCTGAGGCAAGGCCAGAGGTCTCAGGGTaGGCTCCAGAGGCCTTAGGGTCAGAGACAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVTSEARPEVSG*APEALGSETEA Trigger: GGCTTCTGTCTCTGACCCTAAGGCCTCTGGAGCCAACCCTGAGACCTCTGGCCTTGCCTCAGAGGTCACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS CAA 72 bp | GCAAGGTCTCTCTCTGTGGAGGATCCAGCCAGGGACTaGGTTGGGGCATCAGGGTCAGGGACAGTGACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARSLSVEDPARD*VGASGSGTVTS Trigger: AGAGGTCACTGTCCCTGACCCTGATGCCCCAACCAAGTCCCTGGCTGGATCCTCCACAGAGAGAGACCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS CAA 90 bp | CCTGGGCCTCTTCTCTCCAGGGAGAGCGGTCTGGGGAGCCATCAGTaGAGCATATGTTTTGGTCATATGTTCCAGCAGGGCCGTGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGPLLSRESGLGSHQ*SICFGHMFQQGRAR Trigger: CCTTGCACGGCCCTGCTGGAACATATGACCAAAACATATGCTCAACTGATGGCTCCCCAGACCGCTCTCCCTGGAGAGAAGAGGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 ENSMUST00000208459.2 |
||
| CDS GCA 72 bp | ATCCTTCTGCCCATCTTGGTTGCTCAAGAACACCAGTaGCTTTCCACGGGCCTTTGTGGGCTTGCCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ILLPILVAQEHQ*LSTGLCGLAWP Trigger: AGGCCAGGCAAGCCCACAAAGGCCCGTGGAAAGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS CCA 72 bp | GAGCGGTCTGGGGAGCCATCAGTTGAGCATATGTTTTaGTCATATGTTCCAGCAGGGCCGTGCAAGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ERSGEPSVEHMF*SYVPAGPCKAG Trigger: ACCTGCCTTGCACGGCCCTGCTGGAACATATGACCAAAACATATGCTCAACTGATGGCTCCCCAGACCGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000011981.5 ENSMUST00000208316.2 ENSMUST00000208459.2 |
||
| CDS CAA 72 bp | CCCAGAACCTTCAGATGCAGGATCCTTCTGCCCATCTaGGTTGCTCAAGAACACCAGTGCCTTTCCACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRTFRCRILLPI*VAQEHQCLSTG Trigger: GCCCGTGGAAAGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATCTGAAGGTTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS GCA 72 bp | GGGACAGGCCCAGAACCTTCAGATGCAGGATCCTTCTaGCCATCTTGGTTGCTCAAGAACACCAGTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GTGPEPSDAGSF*PSWLLKNTSAF Trigger: AAAGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATCTGAAGGTTCTGGGCCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS GCA 72 bp | AGCAGCAGTCATGGGGACAGGCCCAGAACCTTCAGATaGAGGATCCTTCTGCCCATCTTGGTTGCTCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSSHGDRPRTFR*RILLPILVAQE Trigger: TTCTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATCTGAAGGTTCTGGGCCTGTCCCCATGACTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS CCA 72 bp | AGATCTTCTCAAAGTCCACAGCAAGGTCTCTCTCTGTaGAGGATCCAGCCAGGGACTTGGTTGGGGCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSSQSPQQGLSL*RIQPGTWLGHQ Trigger: CTGATGCCCCAACCAAGTCCCTGGCTGGATCCTCCACAGAGAGAGACCTTGCTGTGGACTTTGAGAAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS GCA 72 bp | AACCTTCAGATGCAGGATCCTTCTGCCCATCTTGGTTaGTCAAGAACACCAGTGCCTTTCCACGGGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: NLQMQDPSAHLG*SRTPVPFHGPL Trigger: CAAAGGCCCGTGGAAAGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATCTGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS CAA 72 bp | GCACCTGGGAGAAAGCTGCAGTCAGGGCTTCCTCCATaGGGCCTGTTAGTTTCTCAGCAAGATCCATCCATA | + |
|
Preference number: 6 (lower is better) Translates to: APGRKLQSGLPP*GLLVSQQDPSI Trigger: TATGGATGGATCTTGCTGAGAAACTAACAGGCCCAATGGAGGAAGCCCTGACTGCAGCTTTCTCCCAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
||
| CDS CAA 72 bp | GAACCTTCAGATGCAGGATCCTTCTGCCCATCTTGGTaGCTCAAGAACACCAGTGCCTTTCCACGGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EPSDAGSFCPSW*LKNTSAFPRAF Trigger: AAAGGCCCGTGGAAAGGCACTGGTGTTCTTGAGCAACCAAGATGGGCAGAAGGATCCTGCATCTGAAGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011981.5 ENSMUST00000208459.2 |
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