Pregenerated sensors for SNAPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021113Ensembl transcript IDs: ENSMUST00000021532.6, ENSMUST00000220882.2, ENSMUST00000220909.2, ENSMUST00000221556.2, ENSMUST00000222025.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTATAATCCCAGCAGTGGGGAGGCCGAGCAAGGCAGTACTCGCATaGAGAGTTCAAGGCCAGCCTAGCATACACAGGCAGACCCTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: SIIPAVGRPSKAVLA*RVQGQPSIHRQTLS Trigger: GGACAGGGTCTGCCTGTGTATGCTAGGCTGGCCTTGAACTCTCCATGCGAGTACTGCCTTGCTCGGCCTCCCCACTGCTGGGATTATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | GGCGTCCACATCCGGATACTGCATCACTGCTTGCAGGCTGTGGAGTaGGTCCATGGTTACCAGGACAACACTGACAAGCTCCAACAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: GVHIRILHHCLQAVE*VHGYQDNTDKLQQA Trigger: GGCCTGTTGGAGCTTGTCAGTGTTGTCCTGGTAACCATGGACTCACTCCACAGCCTGCAAGCAGTGATGCAGTATCCGGATGTGGACGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR CCA 90 bp | TGGCAGGCGTCCACATCCGGATACTGCATCACTGCTTGCAGGCTGTaGAGTGAGTCCATGGTTACCAGGACAACACTGACAAGCTCCAAC | + |
|
Preference number: 1 (lower is better) Translates to: WQASTSGYCITACRL*SESMVTRTTLTSSN Trigger: GTTGGAGCTTGTCAGTGTTGTCCTGGTAACCATGGACTCACTCCACAGCCTGCAAGCAGTGATGCAGTATCCGGATGTGGACGCCTGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR GCA 90 bp | GCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAAGCCCACACCTaGCCTGTCTCATTTCCTGTAGCCATCCAGCCAGCACAATTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: ATSSGLDKVLQEAHT*PVSFPVAIQPAQLV Trigger: AACCAATTGTGCTGGCTGGATGGCTACAGGAAATGAGACAGGGCAGGTGTGGGCTTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 90 bp | CAGAATTCCTGGCAGGCGTCCACATCCGGATACTGCATCACTGCTTaGAGGCTGTGGAGTGAGTCCATGGTTACCAGGACAACACTGACA | + |
|
Preference number: 1 (lower is better) Translates to: QNSWQASTSGYCITA*RLWSESMVTRTTLT Trigger: TGTCAGTGTTGTCCTGGTAACCATGGACTCACTCCACAGCCTGCAAGCAGTGATGCAGTATCCGGATGTGGACGCCTGCCAGGAATTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR GCA 90 bp | CCTTCCTGCTGGTCCTGCTGGTTCTCTGGTTCTCTTTCTCTTAGCTaGTCTGCCTTGCACTTGTCCAGACCCAGAGTCAGAGTCAGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: PSCWSCWFSGSLSLS*SALHLSRPRVRVRR Trigger: TCTTCTGACTCTGACTCTGGGTCTGGACAAGTGCAAGGCAGAGCAGCTAAGAGAAAGAGAACCAGAGAACCAGCAGGACCAGCAGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR GCA 90 bp | ACTTTAAAGCAAATACTACAGAGGGTAAGGAGTGAGGCCCGGCGGTaGATTATCTATAATCCCAGCAGTGGGGAGGCCGAGCAAGGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: TLKQILQRVRSEARR*IIYNPSSGEAEQGS Trigger: ACTGCCTTGCTCGGCCTCCCCACTGCTGGGATTATAGATAATGCACCGCCGGGCCTCACTCCTTACCCTCTGTAGTATTTGCTTTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 90 bp | CCCCTCATCTCTCTGGCATCACACAGTGAGTCTAGGGCTAATAAGTaGCTGACATCACAAAGTACCAAGCAGAGTTTTCGGCAGCTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: PLISLASHSESRANK*LTSQSTKQSFRQLQ Trigger: CTGAAGCTGCCGAAAACTCTGCTTGGTACTTTGTGATGTCAGCCACTTATTAGCCCTAGACTCACTGTGTGATGCCAGAGAGATGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | GTAATGAGGGTTCCCTTCAGCTGTGGAGTGAACCACAGGTTAGCCTaGTCAACTCAGGGAGCTGGGCAAACACAAACTTTCGGTTACTAT | + |
|
Preference number: 1 (lower is better) Translates to: VMRVPFSCGVNHRLA*STQGAGQTQTFGYY Trigger: ATAGTAACCGAAAGTTTGTGTTTGCCCAGCTCCCTGAGTTGATCAGGCTAACCTGTGGTTCACTCCACAGCTGAAGGGAACCCTCATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | GCTGACACTGCATTTTGTCAAACCACGACTACACTGAGAAACCCGTaGGACTGTAAAGGCCTGACCTTTCTCACCTTTGCTGAGGAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: ADTAFCQTTTTLRNP*DCKGLTFLTFAEES Trigger: GCTTTCCTCAGCAAAGGTGAGAAAGGTCAGGCCTTTACAGTCTCACGGGTTTCTCAGTGTAGTCGTGGTTTGACAAAATGCAGTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | TCATCTCTCTGGCATCACACAGTGAGTCTAGGGCTAATAAGTGGCTaGCATCACAAAGTACCAAGCAGAGTTTTCGGCAGCTTCAGACTC | + |
|
Preference number: 1 (lower is better) Translates to: SSLWHHTVSLGLISG*HHKVPSRVFGSFRL Trigger: GAGTCTGAAGCTGCCGAAAACTCTGCTTGGTACTTTGTGATGTCAGCCACTTATTAGCCCTAGACTCACTGTGTGATGCCAGAGAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 90 bp | TATTACAGATGGCATAAATTATTAAATGCCAGAGCAAACCCAGCCTaGCCCAGAGCTGAGGTCCTTCACCACTGTGCAGTGACTTACCTG | + |
|
Preference number: 1 (lower is better) Translates to: YYRWHKLLNARANPA*PRAEVLHHCAVTYL Trigger: CAGGTAAGTCACTGCACAGTGGTGAAGGACCTCAGCTCTGGGGCAGGCTGGGTTTGCTCTGGCATTTAATAATTTATGCCATCTGTAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 90 bp | GCCAGCCTAACGATGCTACCAAGGGATGCTATGCACCAACCACATTaGAGGAAACTAAGACAAACCAGCCACCTAAAGCCTTTAACAAAC | + |
|
Preference number: 1 (lower is better) Translates to: ASLTMLPRDAMHQPH*RKLRQTSHLKPLTN Trigger: GTTTGTTAAAGGCTTTAGGTGGCTGGTTTGTCTTAGTTTCCTGCAATGTGGTTGGTGCATAGCATCCCTTGGTAGCATCGTTAGGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 90 bp | CTGTACAATGCTAATCCACTCAGCTACATATTACTAACCAAGCTCTaGTGTTGCAGCCCAGCAGCTCTGGCCCATGTTCACACTGTAATG | + |
|
Preference number: 1 (lower is better) Translates to: LYNANPLSYILLTKL*CCSPAALAHVHTVM Trigger: CATTACAGTGTGAACATGGGCCAGAGCTGCTGGGCTGCAACACCAGAGCTTGGTTAGTAATATGTAGCTGAGTGGATTAGCATTGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | CTAGGCTCGTGCAAAGAGAAAGTGAAGAGTCTGATTCCACGACAGTaGAACCTAGAAACACAACACACACGCAAGTATTCTGATCCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: LGSCKEKVKSLIPRQ*NLETQHTRKYSDPS Trigger: AGAAGGATCAGAATACTTGCGTGTGTGTTGTGTTTCTAGGTTTCACTGTCGTGGAATCAGACTCTTCACTTTCTCTTTGCACGAGCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR GCA 90 bp | AAGTACCAAGCAGAGTTTTCGGCAGCTTCAGACTCACGAGGCTCCTaGGTAGAAAGTTCAAATCCTGCTAGGATATATTCATGTAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: KYQAEFSAASDSRGS*VESSNPARIYSCNK Trigger: TTTGTTACATGAATATATCCTAGCAGGATTTGAACTTTCTACGCAGGAGCCTCGTGAGTCTGAAGCTGCCGAAAACTCTGCTTGGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | GGTTACTATGACAACACTGTTTGCTACTCACCATCCCTTTGTCTGTaGAATGACACCATGGTCTTTTATAAGCGCTTTGTGAAAAATAGA | + |
|
Preference number: 1 (lower is better) Translates to: GYYDNTVCYSPSLCL*NDTMVFYKRFVKNR Trigger: TCTATTTTTCACAAAGCGCTTATAAAAGACCATGGTGTCATTTCACAGACAAAGGGATGGTGAGTAGCAAACAGTGTTGTCATAGTAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | TTTCAATCATATCAGACTTGGAAATTACCTCTTCAAGCCAGCCTTTaGGCCTTAATAATTAACTATATGTCAGGCTGCATTAGCCTCACA | + |
|
Preference number: 1 (lower is better) Translates to: FQSYQTWKLPLQASL*ALIINYMSGCISLT Trigger: TGTGAGGCTAATGCAGCCTGACATATAGTTAATTATTAAGGCTCAAAGGCTGGCTTGAAGAGGTAATTTCCAAGTCTGATATGATTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 90 bp | ATCATGATCAAAAGCAACCTGGAAGAAAGGGTTTATGTCATCTTATaGACTAGTTTTCTTTCTCTGATTATCAGCTGGGTTGGAAATCTC | + |
|
Preference number: 1 (lower is better) Translates to: IMIKSNLEERVYVIL*TSFLSLIISWVGNL Trigger: GAGATTTCCAACCCAGCTGATAATCAGAGAAAGAAAACTAGTTCATAAGATGACATAAACCCTTTCTTCCAGGTTGCTTTTGATCATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGAATTCCTGGCAGGCGTTCTCTTTCTCTTAGCTaGTCTGCCTTGCACTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SFSGRRAGGHTSRIPGRRSLSLS*SALHLS Trigger: GGACAAGTGCAAGGCAGAGCAGCTAAGAGAAAGAGA...ACGCCTGCCAGGAATTCTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGCCTGCAAGCAGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGAGAAGAACAGACTAAATaGAGTTTTCCTGTGTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QRPASSFSGRRAGGHTSREEQTK*SFPVFP Trigger: TGGAAACACAGGAAAACTCCATTTAGTCTGTTCTTC...TCTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCTGCTTGCAGGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAGAATTCCTGGCAGGCGTCCACATCCGGATACTGCATCACTGCTTGCAGGCAGCTCTCTCACATCTaGATGAGAACCGACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: QQNSWQASTSGYCITACRQLSHI*MRTDTA Trigger: AGCTGTGTCGGTTCTCATGCAGATGTGAGAGAGCTG...CCTGCAAGCAGTGATGCAGTATCCGGATGTGGACGCCTGCCAGGAATTCTGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAGACCCTCCCTCTGGTGCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAAGAGACTGTAAAGGCCTaGCCTTTCTCACCTTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LDPPSGATSSGLDKVLQEETVKA*PFSPLL Trigger: CAGCAAAGGTGAGAAAGGTCAGGCCTTTACAGTCTC...TTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | CTAGACCCTCCCTCTGGTGCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAAGGTCCTTCACCACTGTaGAGTGACTTACCTGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LDPPSGATSSGLDKVLQEGPSPL*SDLPVK Trigger: CTTCACAGGTAAGTCACTGCACAGTGGTGAAGGACC...TTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | CCATGGGTCCCACCATCAAATAGACAGACAGACAGACAGACAGACAGACAGACAAGAGCAAACCCAGCCTaGCCCAGAGCTGAGGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PWVPPSNRQTDRQTDRQTRANPA*PRAEVL Trigger: AAGGACCTCAGCTCTGGGGCAGGCTGGGTTTGCTCT...TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATTTGATGGTGGGACCCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CAA 90 bp | GAGGAGACCTCACTCACCCTGAACCCTCCTTCACAATTACTCCGCTaGAATTCCATATGCCTGCCTTCCATACAACTAGCACGACCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EETSLTLNPPSQLLR*NSICLPSIQLARPQ Trigger: CTGGGGTCGTGCTAGTTGTATGGAAGGCAGGCATATGGAATTCAAGCGGAGTAATTGTGAAGGAGGGTTCAGGGTGAGTGAGGTCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGCCAGGGAGGGCCTGGAGGAACTTCTGGTAGAGCGTGTGGTTAGTATATCCATCTCACAGAAATaGGCTTGTTCTCAGATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QAAREGLEELLVERVVSISISQK*ACSQIQ Trigger: CTGGATCTGAGAACAAGCTCATTTCTGTGAGATGGA...TATACTAACCACACGCTCTACCAGAAGTTCCTCCAGGCCCTCCCTGGCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | CGGCGGTGCATTATCTATAATCCCAGCAGTGGGGAGGCCGAGCAAGGCAGTACTTCTTGGCCTATGGCATaGTCTTCCATCTCACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RRCIIYNPSSGEAEQGSTSWPMA*SSISQK Trigger: TTTCTGTGAGATGGAAGAGCATGCCATAGGCCAAGA...AGTACTGCCTTGCTCGGCCTCCCCACTGCTGGGATTATAGATAATGCACCGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | CTAGACCCTCCCTCTGGTGCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAAATTATCGGACAGAGCTaGAGTCAGACACAGGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LDPPSGATSSGLDKVLQEIIGQS*SQTQET Trigger: TGTTTCCTGTGTCTGACTTCAGCTCTGTCCGATAAT...TTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTAAACCTTTACTCAACTCTTGGCCTATGGCATGCTCTTCCATCTCACAGAACAGAGGGTAAGGAGTaGGGCCCGGCGGTGCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: RVNLYSTLGLWHALPSHRTEGKE*GPAVHY Trigger: ATAATGCACCGCCGGGCCTCACTCCTTACCCTCTGT...TCTGTGAGATGGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGGTTTACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CCA 90 bp | CCATGGGTCCCACCATCAAATAGACAGACAGACAGACAGACAGACAGACAGACAGAAAGCTGCCACAGATaGGTCCTTCTCTGTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: PWVPPSNRQTDRQTDRQTESCHR*VLLCHL Trigger: CAGATGACAGAGAAGGACCCATCTGTGGCAGCTTTC...TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATTTGATGGTGGGACCCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CCA 90 bp | CTAGACCCTCCCTCTGGTGCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAAAGGAATAAAGAGCAGTaGGTTCGATTTACGGGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LDPPSGATSSGLDKVLQERNKEQ*VRFTGV Trigger: TACTCCCGTAAATCGAACCCACTGCTCTTTATTCCT...TTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | CTAGACCCTCCCTCTGGTGCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAAACGATAGTGGGAGTATaGTTTTGTTTCTTGCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: LDPPSGATSSGLDKVLQETIVGV*FCFLQL Trigger: CAGTTGCAAGAAACAAAAGCATACTCCCACTATCGT...TTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCAGCCAGGGAGGGCCTGGAGGAACTTCTGGTAGAGCGTGTGGTTAGTATATGTGAAATGACACCATaGTCTTTTATAAGCGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: QAAREGLEELLVERVVSICEMTP*SFISAL Trigger: CAAAGCGCTTATAAAAGACCATGGTGTCATTTCACA...TATACTAACCACACGCTCTACCAGAAGTTCCTCCAGGCCCTCCCTGGCTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | AAATTTAAAACTCCACCAGCCTCCCGGTTCAGCATTTTCTCTTCCTCTTGGGCGGGTTGGGCTAGAACTTaGTATGTGACCCAGTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: KFKTPPASRFSIFSSSWAGWART*YVTQLV Trigger: GACTAACTGGGTCACATAGCAAGTTCTAGCCCAACC...CGCCCAAGAGGAAGAGAAAATGCTGAACCGGGAGGCTGGTGGAGTTTTAAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACTAACCCAACCAATAATGTCCCACAGCCAAGACCCAAGAAGGAAACAGGTAAAGTAGAAAGGAAATaGGGAGAGGGGCGTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QTNPTNNVPQPRPKKETGKVERK*GEGRQK Trigger: CTTCTGACGCCCCTCTCCCCATTTCCTTTCTACTTT...ACCTGTTTCCTTCTTGGGTCTTGGCTGTGGGACATTATTGGTTGGGTTAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR CAA 90 bp | TGCCAGCCTAACGATGCTACCAAGGGATGCTATGCACCAACCACATaGCAGGAAACTAAGACAAACCAGCCACCTAAAGCCTTTAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: CQPNDATKGCYAPTT*QETKTNQPPKAFNK Trigger: TTTGTTAAAGGCTTTAGGTGGCTGGTTTGTCTTAGTTTCCTGCAATGTGGTTGGTGCATAGCATCCCTTGGTAGCATCGTTAGGCTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CAA 90 bp | ATCATTGCTGACACACATGCGGAATTTCCTCAAATGAAACTGCAGTaGAGAGCCTCTGACCTCCAAAGAGACGACAGGACTCCAGTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: IIADTHAEFPQMKLQ*RASDLQRDDRTPVL Trigger: TAAGACTGGAGTCCTGTCGTCTCTTTGGAGGTCAGAGGCTCTCAACTGCAGTTTCATTTGAGGAAATTCCGCATGTGTGTCAGCAATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAGACCCTCCCTCTGGTGCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAAGCTGTCTTTGATGAGTaGCTTACTTATTTAACCATA | + |
|
Preference number: 2 (lower is better) Translates to: LDPPSGATSSGLDKVLQEAVFDE*LTYLTI Trigger: TATGGTTAAATAAGTAAGGCACTCATCAAAGACAGC...TTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGACACAAGGTAATGAGGGTTCCCTTCAGCTGTGGAGTGAACCACAGGTTCCTTTACTCAACTCTTaGCCTATGGCATGCTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KLTQGNEGSLQLWSEPQVPLLNS*PMACSS Trigger: GGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGG...AACCTGTGGTTCACTCCACAGCTGAAGGGAACCCTCATTACCTTGTGTCAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CCA 90 bp | GATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGAGCCTGCTTGAATGTACAGAGGCCGTGTGTTaGCAGCTTTCAAGCACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DSGSMLLFLATERSLLECTEAVC*QLSSTA Trigger: AGCTGTGCTTGAAAGCTGCCAACACACGGCCTCTGT...ACATTCAAGCAGGCTCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CAA 90 bp | TTCACTGGCTACTTCCTGCTTAGAACACATGACACCTTTCTTCTGTaGGAAAGCTCAAAATTTAAAACTCCACCAGCCTCCCGGTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FTGYFLLRTHDTFLL*ESSKFKTPPASRFS Trigger: GCTGAACCGGGAGGCTGGTGGAGTTTTAAATTTTGAGCTTTCCAACAGAAGAAAGGTGTCATGTGTTCTAAGCAGGAAGTAGCCAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTAAACCTTTACTCAACTCTTGGCCTATGGCATGCTCTTCCATCTCACAGACCCTGTCCAAATCAATaGGGAAGTAAGGGTACATCG | + |
|
Preference number: 2 (lower is better) Translates to: RVNLYSTLGLWHALPSHRPCPNQ*GSKGTS Trigger: CGATGTACCCTTACTTCCTCATTGATTTGGACAGGG...TCTGTGAGATGGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGGTTTACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCTTGGGCGCAGTGAACTCTGTGGATACAAGGTTAAGAACTCCATGGATTTCTTGGCCTATGGCATaGTCTTCCATCTCACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FLLGAVNSVDTRLRTPWISWPMA*SSISQK Trigger: TTTCTGTGAGATGGAAGAGCATGCCATAGGCCAAGA...AATCCATGGAGTTCTTAACCTTGTATCCACAGAGTTCACTGCGCCCAAGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAACCAACAATCGGTGCTTCCAGATGAAAAGTCATCGGAGAAAATCAAGAGCATCCTTCTCTGTCATCTaGCATGCCCTCTGGTACATG | + |
|
Preference number: 2 (lower is better) Translates to: RTNNRCFQMKSHRRKSRASFSVI*HALWYM Trigger: CATGTACCAGAGGGCATGGCAGATGACAGAGAAGGA...TGCTCTTGATTTTCTCCGATGACTTTTCATCTGGAAGCACCGATTGTTGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGATTACTAACCAAGCTCTaGTGTTGCAGCCCAGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LPAFTIVGVCFCFLQLKGLLTKL*CCSPAA Trigger: AGCTGCTGGGCTGCAACACCAGAGCTTGGTTAGTAA...TCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGTGTGTGCCACCACGCCCAGTGACCCAAGTATCTCAATACTTAAGAAAAATTTCCATCTCACAGAAATaGGCTTGTTCTCAGATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RCVPPRPVTQVSQYLRKISISQK*ACSQIQ Trigger: CTGGATCTGAGAACAAGCTCATTTCTGTGAGATGGA...AATTTTTCTTAAGTATTGAGATACTTGGGTCACTGGGCGTGGTGGCACACACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAAGCTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGATCAACTCAGGGAGCTaGGCAAACACAAACTTTCGG | + |
|
Preference number: 2 (lower is better) Translates to: SKLPAFTIVGVCFCFLQLINSGS*ANTNFR Trigger: CCGAAAGTTTGTGTTTGCCCAGCTCCCTGAGTTGAT...CAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAGCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGACCATCCCTTTGTCTGTaGAATGACACCATGGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPAFTIVGVCFCFLQLKGPSLCL*NDTMVF Trigger: AAAGACCATGGTGTCATTTCACAGACAAAGGGATGG...TCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | AAATTGACACAAGGTAATGAGGGTTCCCTTCAGCTGTGGAGTGAACCACAGGTTAACTTTCGGTTACTATaGCAACACTGTTTGCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: KLTQGNEGSLQLWSEPQVNFRLL*QHCLLL Trigger: GAGTAGCAAACAGTGTTGTCATAGTAACCGAAAGTT...AACCTGTGGTTCACTCCACAGCTGAAGGGAACCCTCATTACCTTGTGTCAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | ACGCACACACACACACACCACGCACACACAGACATTAAAATGCATAATATATATAGACCTCACTCACCCTaGACCCTCCTTCACAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: THTHTHHAHTDIKMHNIYRPHSP*TLLHNY Trigger: GTAATTGTGAAGGAGGGTTCAGGGTGAGTGAGGTCT...ATATATATTATGCATTTTAATGTCTGTGTGTGCGTGGTGTGTGTGTGTGTGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTAAACCTTTACTCAACTCTTGGCCTATGGCATGCTCTTCCATCTCACAGAAACTGTCTAGGCTCGTaGAAAGAGAAAGTGAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RVNLYSTLGLWHALPSHRNCLGS*KEKVKS Trigger: ACTCTTCACTTTCTCTTTGCACGAGCCTAGACAGTT...TCTGTGAGATGGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGGTTTACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAACCAACAATCGGTGCTTCCAGATGAAAAGTCATCGGAGAAAATCAAGAGCACAAATTCTAATTTCCTaGCAGAGACAAAGCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RTNNRCFQMKSHRRKSRAQILIS*QRQSRL Trigger: CAGCCTGCTTTGTCTCTGGCAGGAAATTAGAATTTG...TGCTCTTGATTTTCTCCGATGACTTTTCATCTGGAAGCACCGATTGTTGGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCTTGGGCGCAGTGAACTCTGTGGATACAAGGTTAAGAACTCCATGGATTGCTCTCACAGCTAAATaGAGTAACTATCACACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: FLLGAVNSVDTRLRTPWIALTAK*SNYHTN Trigger: ATTTGTGTGATAGTTACTGCATTTAGCTGTGAGAGC...AATCCATGGAGTTCTTAACCTTGTATCCACAGAGTTCACTGCGCCCAAGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGCACACACACACACACCACGCACACACAGACATTAAAATGCATAATATATATCCTTTACTCAACTCTTaGCCTATGGCATGCTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: THTHTHHAHTDIKMHNIYPLLNS*PMACSS Trigger: GGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGG...ATATATATTATGCATTTTAATGTCTGTGTGTGCGTGGTGTGTGTGTGTGTGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR TCA 90 bp | ACGCACACACACACACACCACGCACACACAGACATTAAAATGCATAATATATATCTGATTCCACGACAGTaGAACCTAGAAACACAACAC | + |
|
Preference number: 2 (lower is better) Translates to: THTHTHHAHTDIKMHNIYLIPRQ*NLETQH Trigger: GTGTTGTGTTTCTAGGTTTCACTGTCGTGGAATCAG...ATATATATTATGCATTTTAATGTCTGTGTGTGCGTGGTGTGTGTGTGTGTGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGACTTCAAGCCAGCCTTTaGGCCTTAATAATTAACTAT | + |
|
Preference number: 2 (lower is better) Translates to: LPAFTIVGVCFCFLQLKGLQASL*ALIINY Trigger: ATAGTTAATTATTAAGGCTCAAAGGCTGGCTTGAAG...TCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGAATACCCAAGGTAGTCTaGGAAGATGGTATTCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: LPAFTIVGVCFCFLQLKGIPKVV*EDGIHY Trigger: ATAATGAATACCATCTTCTCAGACTACCTTGGGTAT...TCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CCA 90 bp | GATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGAGCCTGCTTGAATGTCAATCATATCAGACTTaGAAATTACCTCTTCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: DSGSMLLFLATERSLLECQSYQT*KLPLQA Trigger: GGCTTGAAGAGGTAATTTCCAAGTCTGATATGATTG...ACATTCAAGCAGGCTCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CAA 90 bp | ACAATACACAAAGTATCTTCTTGCACTGTTAGTGGAAGGAAACAGTaGAAGTTTACAAAGACCGTAAGCTCAGCTAACTATGCTTTATGG | + |
|
Preference number: 2 (lower is better) Translates to: TIHKVSSCTVSGRKQ*KFTKTVSSANYALW Trigger: CCATAAAGCATAGTTAGCTGAGCTTACGGTCTTTGTAAACTTCAACTGTTTCCTTCCACTAACAGTGCAAGAAGATACTTTGTGTATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR TCA 90 bp | ACGCACACACACACACACCACGCACACACAGACATTAAAATGCATAATATATATAAAATAAATCATTGCTaGCACACATGCGGAATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: THTHTHHAHTDIKMHNIYKINHC*HTCGIS Trigger: GGAAATTCCGCATGTGTGTCAGCAATGATTTATTTT...ATATATATTATGCATTTTAATGTCTGTGTGTGCGTGGTGTGTGTGTGTGTGCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR CCA 72 bp | GGGCAGGCGGGCGGGCGGTCACACCAGCAGAATTCCTaGCAGGCGTCCACATCCGGATACTGCATCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GQAGGRSHQQNS*QASTSGYCITA Trigger: AGCAGTGATGCAGTATCCGGATGTGGACGCCTGCCAGGAATTCTGCTGGTGTGACCGCCCGCCCGCCTGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR CCA 72 bp | CCAGCAGTGGGGAGGCCGAGCAAGGCAGTACTCGCATaGAGAGTTCAAGGCCAGCCTAGCATACACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAVGRPSKAVLA*RVQGQPSIHRQ Trigger: CTGCCTGTGTATGCTAGGCTGGCCTTGAACTCTCCATGCGAGTACTGCCTTGCTCGGCCTCCCCACTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | GCTGGACCTAGACCCTCCCTCTGGTGCCACAAGTTCTaGGCTCGACAAGGTCTTACAGGAAGCCCACACCTG | + |
|
Preference number: 3 (lower is better) Translates to: AGPRPSLWCHKF*ARQGLTGSPHL Trigger: CAGGTGTGGGCTTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAGGTCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | TCTGGGCTCGACAAGGTCTTACAGGAAGCCCACACCTaGCCTGTCTCATTTCCTGTAGCCATCCAGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGLDKVLQEAHT*PVSFPVAIQPA Trigger: TGCTGGCTGGATGGCTACAGGAAATGAGACAGGGCAGGTGTGGGCTTCCTGTAAGACCTTGTCGAGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | CAGCAGAATTCCTGGCAGGCGTCCACATCCGGATACTaGATCACTGCTTGCAGGCTGTGGAGTGAGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: QQNSWQASTSGY*ITACRLWSESM Trigger: CATGGACTCACTCCACAGCCTGCAAGCAGTGATGCAGTATCCGGATGTGGACGCCTGCCAGGAATTCTGCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR TCA 72 bp | GGCTGTGGAGTGAGTCCATGGTTACCAGGACAACACTaGCAAGCTCCAACAGGCCAAAGACGAGGGTCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GCGVSPWLPGQH*QAPTGQRRGSE Trigger: TTCCGACCCTCGTCTTTGGCCTGTTGGAGCTTGTCAGTGTTGTCCTGGTAACCATGGACTCACTCCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR GCA 72 bp | CAAATACTACAGAGGGTAAGGAGTGAGGCCCGGCGGTaGATTATCTATAATCCCAGCAGTGGGGAGGCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: QILQRVRSEARR*IIYNPSSGEAE Trigger: CTCGGCCTCCCCACTGCTGGGATTATAGATAATGCACCGCCGGGCCTCACTCCTTACCCTCTGTAGTATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | AACTATGACCCTGCTGGACCTAGACCCTCCCTCTGGTaGCACAAGTTCTGGGCTCGACAAGGTCTTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NYDPAGPRPSLW*HKFWARQGLTG Trigger: TCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAGGTCCAGCAGGGTCATAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | ATTAAATGCCAGAGCAAACCCAGCCTGCCCCAGAGCTaGGGTCCTTCACCACTGTGCAGTGACTTACCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IKCQSKPSLPQS*GPSPLCSDLPV Trigger: CACAGGTAAGTCACTGCACAGTGGTGAAGGACCTCAGCTCTGGGGCAGGCTGGGTTTGCTCTGGCATTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | AGAGACGACAGGACTCCAGTCTTACTGAGATGCCGATaGGAGGAGACCTCACTCACCCTGAACCCTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RDDRTPVLLRCR*EETSLTLNPPS Trigger: TGAAGGAGGGTTCAGGGTGAGTGAGGTCTCCTCTCATCGGCATCTCAGTAAGACTGGAGTCCTGTCGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR GCA 72 bp | TGCATGAGAACCGACACAGCTCCCATCACTCGGCCCTaGCTGCTCCAATCCCTAATATCTCACTCTCGACAA | + |
|
Preference number: 3 (lower is better) Translates to: CMRTDTAPITRP*LLQSLISHSRQ Trigger: TTGTCGAGAGTGAGATATTAGGGATTGGAGCAGGCAGGGCCGAGTGATGGGAGCTGTGTCGGTTCTCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR GCA 72 bp | AAGTCGATGCAGGAGCTAAAAAGATGCACGGGTACCTaGTTTTCTGACGCCACCCATGTCCTCCTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KSMQELKRCTGT*FSDATHVLLLL Trigger: GAGGAGGAGGAGGACATGGGTGGCGTCAGAAAAGCAGGTACCCGTGCATCTTTTTAGCTCCTGCATCGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR CCA 72 bp | AGTCAGAAGAGTCAAGCTTGGACTGGCGATGCCTCCTaGACTTGGACACCGGGACAACAGCTGAAAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SQKSQAWTGDAS*TWTPGQQLKRL Trigger: AAGCCTTTTCAGCTGTTGTCCCGGTGTCCAAGTCCAGGAGGCATCGCCAGTCCAAGCTTGACTCTTCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR TCA 72 bp | ATCCGGATACTGCATCACTGCTTGCAGGCTGTGGAGTaGGTCCATGGTTACCAGGACAACACTGACAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IRILHHCLQAVE*VHGYQDNTDKL Trigger: GAGCTTGTCAGTGTTGTCCTGGTAACCATGGACTCACTCCACAGCCTGCAAGCAGTGATGCAGTATCCGGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR GCA 72 bp | AGCTGCCACAGATGGGTCCTTCTCTGTCATCTGCCATaGCCTCTGGTACATGGGACACAACTGATTTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SCHRWVLLCHLP*PLVHGTQLIWI Trigger: GATCCAAATCAGTTGTGTCCCATGTACCAGAGGGCATGGCAGATGACAGAGAAGGACCCATCTGTGGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | AAAGGCCTGACCTTTCTCACCTTTGCTGAGGAAAGCTaGCACAGATGGGTCCTTCTCTGTCATCTGCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: KGLTFLTFAEES*HRWVLLCHLPC Trigger: GCATGGCAGATGACAGAGAAGGACCCATCTGTGGCAGCTTTCCTCAGCAAAGGTGAGAAAGGTCAGGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | TCCACATCCGGATACTGCATCACTGCTTGCAGGCTGTaGAGTGAGTCCATGGTTACCAGGACAACACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: STSGYCITACRL*SESMVTRTTLT Trigger: TGTCAGTGTTGTCCTGGTAACCATGGACTCACTCCACAGCCTGCAAGCAGTGATGCAGTATCCGGATGTGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAGCCAGGGAGGGCCTGGAGGAACTTCTGGTAGAGCGTGTGGTTAGTATACTCACAGAAATGAGCTaGTTCTCAGATCCAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QAAREGLEELLVERVVSILTEMS*FSDPVF Trigger: GAAGACTGGATCTGAGAACAAGCTCATTTCTGTGAG...TATACTAACCACACGCTCTACCAGAAGTTCCTCCAGGCCCTCCCTGGCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAGACAGAGGGACCCTGTCTCAACCCCCACCCCACCAACTACATAAAGACGTATGCTTTTGTTTCTaGCAACTGAAAGGAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QTDRGTLSQPPPHQLHKDVCFCF*QLKGAC Trigger: GCAGGCTCCTTTCAGTTGCAAGAAACAAAAGCATAC...GTCTTTATGTAGTTGGTGGGGTGGGGGTTGAGACAGGGTCCCTCTGTCTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | GTTCCCTTCAGCTGTGGAGTGAACCACAGGTTAGCCTaGTCAACTCAGGGAGCTGGGCAAACACAAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VPFSCGVNHRLA*STQGAGQTQTF Trigger: GAAAGTTTGTGTTTGCCCAGCTCCCTGAGTTGATCAGGCTAACCTGTGGTTCACTCCACAGCTGAAGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | CCACTCAGCTACATATTACTAACCAAGCTCTGGTGTTaGAGCCCAGCAGCTCTGGCCCATGTTCACACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PLSYILLTKLWC*SPAALAHVHTV Trigger: TACAGTGTGAACATGGGCCAGAGCTGCTGGGCTGCAACACCAGAGCTTGGTTAGTAATATGTAGCTGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | GCTAATCCACTCAGCTACATATTACTAACCAAGCTCTaGTGTTGCAGCCCAGCAGCTCTGGCCCATGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ANPLSYILLTKL*CCSPAALAHVH Trigger: GTGAACATGGGCCAGAGCTGCTGGGCTGCAACACCAGAGCTTGGTTAGTAATATGTAGCTGAGTGGATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | CTGCCATGCCCTCTGGTACATGGGACACAACTGATTTaGATCTCCACCCTAGCTAAGAGCATCATTTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPCPLVHGTQLI*ISTLAKSIIWC Trigger: ACACCAAATGATGCTCTTAGCTAGGGTGGAGATCCAAATCAGTTGTGTCCCATGTACCAGAGGGCATGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | TCGATTTACGGGAGTAAACACAGGACTGTTGCTAGGTaGCAGTCTGTAGTCCCACCTACTTGGGAAAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SIYGSKHRTVAR*QSVVPPTWESE Trigger: CTCACTTTCCCAAGTAGGTGGGACTACAGACTGCCACCTAGCAACAGTCCTGTGTTTACTCCCGTAAATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | CTGGAGGAACTTCTGGTAGAGCGTGTGGTTAGTATATaGAGGCCATGGGTCCCACCATCAAATAGACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LEELLVERVVSI*RPWVPPSNRQT Trigger: TGTCTGTCTATTTGATGGTGGGACCCATGGCCTTCATATACTAACCACACGCTCTACCAGAAGTTCCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | TGGCATCACACAGTGAGTCTAGGGCTAATAAGTGGCTaGCATCACAAAGTACCAAGCAGAGTTTTCGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WHHTVSLGLISG*HHKVPSRVFGS Trigger: GCTGCCGAAAACTCTGCTTGGTACTTTGTGATGTCAGCCACTTATTAGCCCTAGACTCACTGTGTGATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | ACGATGCTACCAAGGGATGCTATGCACCAACCACATTaGAGGAAACTAAGACAAACCAGCCACCTAAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TMLPRDAMHQPH*RKLRQTSHLKP Trigger: AGGCTTTAGGTGGCTGGTTTGTCTTAGTTTCCTGCAATGTGGTTGGTGCATAGCATCCCTTGGTAGCATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | ACTTCTCTTCCTTACGTTCATTCGGAGCGTTACCTTTaGTTCTGGAAGATCTCTTCCTTCCTGCTGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSLPYVHSERYL*FWKISSFLLVL Trigger: CAGGACCAGCAGGAAGGAAGAGATCTTCCAGAAGCAAAGGTAACGCTCCGAATGAACGTAAGGAAGAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221556.2 |
||
| 3UTR CCA 72 bp | AAATTGACACAAGGTAATGAGGGTTCCCTTCAGCTGTaGAGTGAACCACAGGTTAGCCTGATCAACTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KLTQGNEGSLQL*SEPQVSLINSG Trigger: CCCTGAGTTGATCAGGCTAACCTGTGGTTCACTCCACAGCTGAAGGGAACCCTCATTACCTTGTGTCAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CAA 90 bp | GGAACGTGTGTGGAGGCAAAAAGTAGCGCCACGCCAAAGCTAAAGCTTCCTTTGTTTAAATTCCTCATTTaGCCACATCCGAGTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GTCVEAKSSATPKLKLPLFKFLI*PHPSVL Trigger: CAGAACACTCGGATGTGGCAAAATGAGGAATTTAAA...CAAAGGAAGCTTTAGCTTTGGCGTGGCGCTACTTTTTGCCTCCACACACGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222025.2 |
||
| 3UTR TCA 72 bp | AGCAAACAAGGCTCAAGTCCCAGAGAGAGAAGCAAGTaGGGAGAGTGCAGAATGCATCATGGGTTAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SKQGSSPRERSK*GECRMHHGLEK Trigger: CTTTTCTAACCCATGATGCATTCTGCACTCTCCTCACTTGCTTCTCTCTCTGGGACTTGAGCCTTGTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | CGGTTCATCGCCTTCTCTCAAAGGCTGAGGCTAACATaGTACTCTAATTCTCTGGTAACAAGGCTTCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RFIAFSQRLRLT*YSNSLVTRLPS Trigger: ACTGGGAAGCCTTGTTACCAGAGAATTAGAGTATCATGTTAGCCTCAGCCTTTGAGAGAAGGCGATGAACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | GCAGAGTTTTCGGCAGCTTCAGACTCACGAGGCTCCTaGGTAGAAAGTTCAAATCCTGCTAGGATATATTCA | + |
|
Preference number: 3 (lower is better) Translates to: AEFSAASDSRGS*VESSNPARIYS Trigger: TGAATATATCCTAGCAGGATTTGAACTTTCTACGCAGGAGCCTCGTGAGTCTGAAGCTGCCGAAAACTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | AGAGAGAAGCAAGTGAGGAGAGTGCAGAATGCATCATaGGTTAGAAAAGCCAACCACACCAGACCTGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: REKQVRRVQNAS*VRKANHTRPVS Trigger: TGATACAGGTCTGGTGTGGTTGGCTTTTCTAACCCATGATGCATTCTGCACTCTCCTCACTTGCTTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | TCTCTGGCATCACACAGTGAGTCTAGGGCTAATAAGTaGCTGACATCACAAAGTACCAAGCAGAGTTTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: SLASHSESRANK*LTSQSTKQSFR Trigger: CCGAAAACTCTGCTTGGTACTTTGTGATGTCAGCCACTTATTAGCCCTAGACTCACTGTGTGATGCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR-3UTR CAA 90 bp | ACAATTACTCCGCTTGAATTCCATATGCCTGCCTTCCATACAACTAGCACGACCCTCACAGAAATGAGCTaGTTCTCAGATCCAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TITPLEFHMPAFHTTSTTLTEMS*FSDPVF Trigger: GAAGACTGGATCTGAGAACAAGCTCATTTCTGTGAG...GGTCGTGCTAGTTGTATGGAAGGCAGGCATATGGAATTCAAGCGGAGTAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR TCA 72 bp | TCAGGGAGCTGGGCAAACACAAACTTTCGGTTACTATaGCAACACTGTTTGCTACTCACCATCCCTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGSWANTNFRLL*QHCLLLTIPLS Trigger: AGACAAAGGGATGGTGAGTAGCAAACAGTGTTGTCATAGTAACCGAAAGTTTGTGTTTGCCCAGCTCCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | CTGAACGCTAGGATTAAAGGTTTGTTTATTGAGACTTaGTCTCAGAGTATAGCGCCCAGGCCGTCCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LNARIKGLFIET*SQSIAPRPSSK Trigger: CTTTGAGGACGGCCTGGGCGCTATACTCTGAGATCAAGTCTCAATAAACAAACCTTTAATCCTAGCGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR GCA 72 bp | TCCAGTAAGCTCCCAGCATTTACGATAGTGGGAGTATaGTTTTGTTTCTTGCAACTGAAAGGAGCCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSKLPAFTIVGV*FCFLQLKGACL Trigger: CAAGCAGGCTCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAGCTTACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR GCA 72 bp | GCTTGTTCTCAGATCCAGTCTTCACTGGCTACTTCCTaGTTAGAACACATGACACCTTTCTTCTGTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ACSQIQSSLATS*LEHMTPFFCWK Trigger: TTTCCAACAGAAGAAAGGTGTCATGTGTTCTAAGCAGGAAGTAGCCAGTGAAGACTGGATCTGAGAACAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| 3UTR TCA 72 bp | GTGAAACCTAGAAACACAACACACACGCAAGTATTCTaGTCCTTCTGGCTCTCACAGCTAAATGCAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: VKPRNTTHTQVF*SFWLSQLNAVT Trigger: AGTTACTGCATTTAGCTGTGAGAGCCAGAAGGATCAGAATACTTGCGTGTGTGTTGTGTTTCTAGGTTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR GCA 72 bp | TGGAAAGGACAAGGAGAAATCAGAACCAACAATCGGTaGTTCCAGATGAAAAGTCATCGGAGAAAATCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: WKGQGEIRTNNR*FQMKSHRRKSR Trigger: TCTTGATTTTCTCCGATGACTTTTCATCTGGAAGCACCGATTGTTGGTTCTGATTTCTCCTTGTCCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CCA 72 bp | ATCTTCAGAGTAAACCTTTACTCAACTCTTGGCCTATaGCATGCTCTTCCATCTCACAGAAATGAGCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: IFRVNLYSTLGL*HALPSHRNELV Trigger: AACAAGCTCATTTCTGTGAGATGGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGGTTTACTCTGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAGCTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGCCTCAAGTCTGGGCTTaGACATTTATATTAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: SKLPAFTIVGVCFCFLQLPQVWA*TFILTQ Trigger: CTGTGTTAATATAAATGTCAAAGCCCAGACTTGAGG...CAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAGCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | AGTCCTCACACTTGTAATCCTCCTGTTTCAGCTTCCTaGACGCTAGGATTAAAGGTTTGTTTATTGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: SPHTCNPPVSAS*TLGLKVCLLRL Trigger: AAGTCTCAATAAACAAACCTTTAATCCTAGCGTTCAGGAAGCTGAAACAGGAGGATTACAAGTGTGAGGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR GCA 72 bp | TTCTGTGTCAAAGACACGTTTCAGAATCTACATGACTaGTCCTATGGGCCTATTAGACAGTACATAAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: FCVKDTFQNLHD*SYGPIRQYISI Trigger: AATGCTTATGTACTGTCTAATAGGCCCATAGGAGCAGTCATGTAGATTCTGAAACGTGTCTTTGACACAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | CGTAACTTACTAAGGTATCAGTCAAGTTATTGGCCATaGAAATTTCACACACTAGAAGATAAAACAAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RNLLRYQSSYWP*KFHTLEDKTRG Trigger: CCCCCTTGTTTTATCTTCTAGTGTGTGAAATTTTCATGGCCAATAACTTGACTGATACCTTAGTAAGTTACG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR TCA 72 bp | TTTAAATTCCTCATTTTGCCACATCCGAGTGTTCTGTaGCAGGCCTTAAATTGGCAGATTAAAAATGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FKFLILPHPSVL*QALNWQIKNVL Trigger: GAGAACATTTTTAATCTGCCAATTTAAGGCCTGTCACAGAACACTCGGATGTGGCAAAATGAGGAATTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222025.2 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGCCTGCAAGCAGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGCCTTCCTGCTGGTCCTaGTGGTTCTCTGGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEACKQLLGQAGGRSHQQPSCWS*WFSGSL Trigger: AAGAGAACCAGAGAACCAGCAGGACCAGCAGGAAGG...CTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCTGCTTGCAGGCCTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220909.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCTGCAAGCAGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGAATCTCTCTGGCTCCTCTaGAGAGCCTTCACCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLQAASRAGGRAVTPAESLWLL*RAFTVL Trigger: GAGAACGGTGAAGGCTCTTCAGAGGAGCCAGAGAGA...TTCTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCTGCTTGCAGGCCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220909.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGAATTCCTGGCAGGCAGAAGAGTCAAGCTTaGACTGGCGATGCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFSGRRAGGHTSRIPGRQKSQA*TGDASW Trigger: CCAGGAGGCATCGCCAGTCCAAGCTTGACTCTTCTG...CCTGCCAGGAATTCTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220909.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCTGCAAGCAGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGAATTAGCTGCTCTGCCTTaGACTTGTCCAGACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLQAASRAGGRAVTPAELAALP*TCPDPE Trigger: CTCTGGGTCTGGACAAGTGCAAGGCAGAGCAGCTAA...TTCTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCTGCTTGCAGGCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220909.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCCTGCAAGCAGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGACGTTACCTTTGCTTCTaGAAGATCTCTTCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRPASSFSGRRAGGHTSRRYLCF*KISSFL Trigger: CAGGAAGGAAGAGATCTTCCAGAAGCAAAGGTAACG...TCTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCTGCTTGCAGGCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220909.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGCGGTCACACCAGCAGAATTCCTGGCAGGCGTCCACATCCGGATACTGCTCCTGCTGGTCCTGCTaGTTCTCTGGTTCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRSHQQNSWQASTSGYCSCWSC*FSGSLS Trigger: AGAAAGAGAACCAGAGAACCAGCAGGACCAGCAGGA...GCAGTATCCGGATGTGGACGCCTGCCAGGAATTCTGCTGGTGTGACCGCCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220909.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGCCAGGGAGGGCCTGGAGGAACTTCTGGTAGAGCGTGTGGTTAGTATATCTCTTGGAAGCGGCTaGGCAGCGTCTCGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAAREGLEELLVERVVSISLGSG*AASRSQ Trigger: CTGACTACGAGACGCTGCTCAGCCGCTTCCAAGAGA...TATACTAACCACACGCTCTACCAGAAGTTCCTCCAGGCCCTCCCTGGCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR TCA 90 bp | GGAACGTGTGTGGAGGCAAAAAGTAGCGCCACGCCAAAGCTAAAGCTTCCTTTGTGCGCCAGAGCTCCGTaGAGTCCTCGAAGCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GTCVEAKSSATPKLKLPLCARAP*SPRSAR Trigger: GCGTGCGCTTCGAGGACTTCACGGAGCTCTGGCGCA...CAAAGGAAGCTTTAGCTTTGGCGTGGCGCTACTTTTTGCCTCCACACACGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222025.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGGTCCCACCATCAAATAGACAGACAGACAGACAGACAGACAGACAGACATGCGCCAGAGCTCCGTaGAGTCCTCGAAGCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: PWVPPSNRQTDRQTDRQTCARAP*SPRSAR Trigger: GCGTGCGCTTCGAGGACTTCACGGAGCTCTGGCGCA...TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATTTGATGGTGGGACCCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR TCA 90 bp | GGAACGTGTGTGGAGGCAAAAAGTAGCGCCACGCCAAAGCTAAAGCTTCCTTTGTCTCTTGGAAGCGGCTaGGCAGCGTCTCGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTCVEAKSSATPKLKLPLSLGSG*AASRSQ Trigger: CTGACTACGAGACGCTGCTCAGCCGCTTCCAAGAGA...CAAAGGAAGCTTTAGCTTTGGCGTGGCGCTACTTTTTGCCTCCACACACGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222025.2 |
||
| CDS-3UTR CCA 90 bp | GGAACGTGTGTGGAGGCAAAAAGTAGCGCCACGCCAAAGCTAAAGCTTCCTTTGACGCTGTCCATCTCTTaGAAGCGGCTGAGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTCVEAKSSATPKLKLPLTLSIS*KRLSSV Trigger: GACGCTGCTCAGCCGCTTCCAAGAGATGGACAGCGT...CAAAGGAAGCTTTAGCTTTGGCGTGGCGCTACTTTTTGCCTCCACACACGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222025.2 |
||
| CDS-3UTR GCA 90 bp | TTATTAAATGCCAGAGCAAACCCAGCCTGCCCCAGAGCTGAGGTCCTTCACCACCCTTCCTGCTGGTCCTaGTGGTTCTCTGGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLNARANPACPRAEVLHHPSCWS*WFSGSL Trigger: AAGAGAACCAGAGAACCAGCAGGACCAGCAGGAAGG...GTGGTGAAGGACCTCAGCTCTGGGGCAGGCTGGGTTTGCTCTGGCATTTAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CCA 90 bp | CCATGGGTCCCACCATCAAATAGACAGACAGACAGACAGACAGACAGACAGACAACGCTGTCCATCTCTTaGAAGCGGCTGAGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PWVPPSNRQTDRQTDRQTTLSIS*KRLSSV Trigger: GACGCTGCTCAGCCGCTTCCAAGAGATGGACAGCGT...TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATTTGATGGTGGGACCCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CCA 90 bp | GGAACGTGTGTGGAGGCAAAAAGTAGCGCCACGCCAAAGCTAAAGCTTCCTTTGCAGAGACCCAGAAGATaGTCGCGAACTTCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTCVEAKSSATPKLKLPLQRPRR*SRTSCC Trigger: GCAGCATGAAGTTCGCGACCATCTTCTGGGTCTCTG...CAAAGGAAGCTTTAGCTTTGGCGTGGCGCTACTTTTTGCCTCCACACACGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222025.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTCACTGGCTACTTCCTGCTTAGAACACATGACACCTTTCTTCTGTTGGAAGATGCCTCCTGGACTTaGACACCGGGACAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTGYFLLRTHDTFLLLEDASWT*TPGQQL Trigger: CAGCTGTTGTCCCGGTGTCCAAGTCCAGGAGGCATC...TTCCAACAGAAGAAAGGTGTCATGTGTTCTAAGCAGGAAGTAGCCAGTGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGTGCCACCACGCCCAGTGACCCAAGTATCTCAATACTTAAGAAAAATTGATGCCTCCTGGACTTaGACACCGGGACAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCVPPRPVTQVSQYLRKIDASWT*TPGQQL Trigger: CAGCTGTTGTCCCGGTGTCCAAGTCCAGGAGGCATC...AATTTTTCTTAAGTATTGAGATACTTGGGTCACTGGGCGTGGTGGCACACACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTTGGGCGCAGTGAACTCTGTGGATACAAGGTTAAGAACTCCATGGATTCAGAAGAGTCAAGCTTaGACTGGCGATGCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLGAVNSVDTRLRTPWIQKSQA*TGDASW Trigger: CCAGGAGGCATCGCCAGTCCAAGCTTGACTCTTCTG...AATCCATGGAGTTCTTAACCTTGTATCCACAGAGTTCACTGCGCCCAAGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTAAACCTTTACTCAACTCTTGGCCTATGGCATGCTCTTCCATCTCACAGATCTCTCTGGCTCCTCTaGAGAGCCTTCACCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVNLYSTLGLWHALPSHRSLWLL*RAFTVL Trigger: GAGAACGGTGAAGGCTCTTCAGAGGAGCCAGAGAGA...TCTGTGAGATGGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGGTTTACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTATGGCATGCTCTTCCATCTCACAGAAATGAGCTTGTTCTCAGATCCATTAGCTGCTCTGCCTTaGACTTGTCCAGACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAYGMLFHLTEMSLFSDPLAALP*TCPDPE Trigger: CTCTGGGTCTGGACAAGTGCAAGGCAGAGCAGCTAA...TGGATCTGAGAACAAGCTCATTTCTGTGAGATGGAAGAGCATGCCATAGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTATGGCATGCTCTTCCATCTCACAGAAATGAGCTTGTTCTCAGATCCACCTTCCTGCTGGTCCTaGTGGTTCTCTGGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAYGMLFHLTEMSLFSDPPSCWS*WFSGSL Trigger: AAGAGAACCAGAGAACCAGCAGGACCAGCAGGAAGG...TGGATCTGAGAACAAGCTCATTTCTGTGAGATGGAAGAGCATGCCATAGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTAAACCTTTACTCAACTCTTGGCCTATGGCATGCTCTTCCATCTCACAGACAGAAGAGTCAAGCTTaGACTGGCGATGCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVNLYSTLGLWHALPSHRQKSQA*TGDASW Trigger: CCAGGAGGCATCGCCAGTCCAAGCTTGACTCTTCTG...TCTGTGAGATGGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGGTTTACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTTGGGCGCAGTGAACTCTGTGGATACAAGGTTAAGAACTCCATGGATTACTGCTTGCAGGCTGTaGAGTGAGTCCATGGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: FLLGAVNSVDTRLRTPWITACRL*SESMVT Trigger: GGTAACCATGGACTCACTCCACAGCCTGCAAGCAGT...AATCCATGGAGTTCTTAACCTTGTATCCACAGAGTTCACTGCGCCCAAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR CAA 72 bp | GACACACATGCGGAATTTCCTCAAATGAAACTGCAGTaGAGAGCCTCTGACCTCCAAAGAGACGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: DTHAEFPQMKLQ*RASDLQRDDRT Trigger: AGTCCTGTCGTCTCTTTGGAGGTCAGAGGCTCTCAACTGCAGTTTCATTTGAGGAAATTCCGCATGTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS-3UTR TCA 90 bp | GATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGAGCCTGCTTGAATGTCCTCCTTTACCAGACTaGGAGCTCTGTCTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGSMLLFLATERSLLECPPLPD*ELCLAW Trigger: CCATGCCAGACAGAGCTCTCAGTCTGGTAAAGGAGG...ACATTCAAGCAGGCTCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR TCA 90 bp | AGTAAGCTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGTCTCTCTGGCTCCTCTaGAGAGCCTTCACCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKLPAFTIVGVCFCFLQLSLWLL*RAFTVL Trigger: GAGAACGGTGAAGGCTCTTCAGAGGAGCCAGAGAGA...CAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAGCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CCA 90 bp | AAATTGACACAAGGTAATGAGGGTTCCCTTCAGCTGTGGAGTGAACCACAGGTTTCCTGCTGGTCCTGCTaGTTCTCTGGTTCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTQGNEGSLQLWSEPQVSCWSC*FSGSLS Trigger: AGAAAGAGAACCAGAGAACCAGCAGGACCAGCAGGA...AACCTGTGGTTCACTCCACAGCTGAAGGGAACCCTCATTACCTTGTGTCAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CCA 90 bp | ACAATTACTCCGCTTGAATTCCATATGCCTGCCTTCCATACAACTAGCACGACCTCCTGCTGGTCCTGCTaGTTCTCTGGTTCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TITPLEFHMPAFHTTSTTSCWSC*FSGSLS Trigger: AGAAAGAGAACCAGAGAACCAGCAGGACCAGCAGGA...GGTCGTGCTAGTTGTATGGAAGGCAGGCATATGGAATTCAAGCGGAGTAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS-3UTR GCA 90 bp | GATCCAGTCTTCACTGGCTACTTCCTGCTTAGAACACATGACACCTTTCTTCTGTCTCTTTCTCTTAGCTaGTCTGCCTTGCACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPVFTGYFLLRTHDTFLLSLSLS*SALHLS Trigger: GGACAAGTGCAAGGCAGAGCAGCTAAGAGAAAGAGA...CAGAAGAAAGGTGTCATGTGTTCTAAGCAGGAAGTAGCCAGTGAAGACTGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTATGGCATGCTCTTCCATCTCACAGAAATGAGCTTGTTCTCAGATCCATTTTGCCACAGAAGATaGTCGCGAACTTCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAYGMLFHLTEMSLFSDPFCHRR*SRTSCC Trigger: GCAGCATGAAGTTCGCGACCATCTTCTGTGGCAAAA...TGGATCTGAGAACAAGCTCATTTCTGTGAGATGGAAGAGCATGCCATAGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CAA 72 bp | TCACTCACCCTGAACCCTCCTTCACAATTACTCCGCTaGAATTCCATATGCCTGCCTTCCATACAACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTLNPPSQLLR*NSICLPSIQLA Trigger: TGCTAGTTGTATGGAAGGCAGGCATATGGAATTCAAGCGGAGTAATTGTGAAGGAGGGTTCAGGGTGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS-3UTR TCA 90 bp | GATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGAAAGGAGCCTGCTTGAATGTTCCTTGTGCCACTCCTaGTGCTCCAAAACTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSGSMLLFLATERSLLECSLCHS*CSKTMF Trigger: GAACATAGTTTTGGAGCATCAGGAGTGGCACAAGGA...ACATTCAAGCAGGCTCCTTTCAGTTGCAAGAAACAAAAGCATACTCCCACTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CCA 90 bp | AGAGTAAACCTTTACTCAACTCTTGGCCTATGGCATGCTCTTCCATCTCACAGACGTTACCTTTGCTTCTaGAAGATCTCTTCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVNLYSTLGLWHALPSHRRYLCF*KISSFL Trigger: CAGGAAGGAAGAGATCTTCCAGAAGCAAAGGTAACG...TCTGTGAGATGGAAGAGCATGCCATAGGCCAAGAGTTGAGTAAAGGTTTACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR TCA 90 bp | ACGCACACACACACACACCACGCACACACAGACATTAAAATGCATAATATATATTTACCAGGACAACACTaGCAAGCTCCAACAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHHAHTDIKMHNIYLPGQH*QAPTGQ Trigger: TTGGCCTGTTGGAGCTTGTCAGTGTTGTCCTGGTAA...ATATATATTATGCATTTTAATGTCTGTGTGTGCGTGGTGTGTGTGTGTGTGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS-3UTR GCA 90 bp | GATCCAGTCTTCACTGGCTACTTCCTGCTTAGAACACATGACACCTTTCTTCTGTTAAATTCCTCATTTTaGCACAGAAGATGGTCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: DPVFTGYFLLRTHDTFLLLNSSF*HRRWSR Trigger: TCGCGACCATCTTCTGTGGCAAAATGAGGAATTTAA...CAGAAGAAAGGTGTCATGTGTTCTAAGCAGGAAGTAGCCAGTGAAGACTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR GCA 90 bp | TGCATATATTTAAAACAGACTAACCCAACCAATAATGTCCCACAGCCAAGACCCTCTCTTTCTCTTAGCTaGTCTGCCTTGCACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIYLKQTNPTNNVPQPRPSLSLS*SALHLS Trigger: GGACAAGTGCAAGGCAGAGCAGCTAAGAGAAAGAGA...GGGTCTTGGCTGTGGGACATTATTGGTTGGGTTAGTCTGTTTTAAATATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS-3UTR TCA 90 bp | AGAACCAACAATCGGTGCTTCCAGATGAAAAGTCATCGGAGAAAATCAAGAGCATTCATCAAGTCTTGCTaGAACCTGATGACTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTNNRCFQMKSHRRKSRAFIKSC*NLMTSS Trigger: GGATGAAGTCATCAGGTTTCAGCAAGACTTGATGAA...TGCTCTTGATTTTCTCCGATGACTTTTCATCTGGAAGCACCGATTGTTGGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR TCA 90 bp | ACGCACACACACACACACCACGCACACACAGACATTAAAATGCATAATATATATTCCTTGTGCCACTCCTaGTGCTCCAAAACTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHHAHTDIKMHNIYSLCHS*CSKTMF Trigger: GAACATAGTTTTGGAGCATCAGGAGTGGCACAAGGA...ATATATATTATGCATTTTAATGTCTGTGTGTGCGTGGTGTGTGTGTGTGTGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| 3UTR CAA 72 bp | TACTTCCTGCTTAGAACACATGACACCTTTCTTCTGTaGGAAAGCTCAAAATTTAAAACTCCACCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YFLLRTHDTFLL*ESSKFKTPPAS Trigger: GGAGGCTGGTGGAGTTTTAAATTTTGAGCTTTCCAACAGAAGAAAGGTGTCATGTGTTCTAAGCAGGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||
| 3UTR CAA 72 bp | AAAGTATCTTCTTGCACTGTTAGTGGAAGGAAACAGTaGAAGTTTACAAAGACCGTAAGCTCAGCTAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: KVSSCTVSGRKQ*KFTKTVSSANY Trigger: ATAGTTAGCTGAGCTTACGGTCTTTGTAAACTTCAACTGTTTCCTTCCACTAACAGTGCAAGAAGATACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| 3UTR CAA 72 bp | ACATACCTAAGATATACATTTTCAATCATATCAGACTaGGAAATTACCTCTTCAAGCCAGCCTTTGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TYLRYTFSIISD*EITSSSQPLSL Trigger: AAGGCTCAAAGGCTGGCTTGAAGAGGTAATTTCCAAGTCTGATATGATTGAAAATGTATATCTTAGGTATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CAA 90 bp | AGCTTCTCGGGCAGGCGGGCGGGCGGTCACACCAGCAGAATTCCTGGCAGGCGTTTCGGAGCGTTACCTTaGCTTCTGGAAGATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSGRRAGGHTSRIPGRRFGALP*LLEDLF Trigger: GAAGAGATCTTCCAGAAGCAAAGGTAACGCTCCGAA...ACGCCTGCCAGGAATTCTGCTGGTGTGACCGCCCGCCCGCCTGCCCGAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220909.2 |
||
| CDS-3UTR CAA 90 bp | GGAACGTGTGTGGAGGCAAAAAGTAGCGCCACGCCAAAGCTAAAGCTTCCTTTGCACGCTGTCCATCTCTaGGAAGCGGCTGAGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GTCVEAKSSATPKLKLPLHAVHL*EAAEQR Trigger: ACGCTGCTCAGCCGCTTCCAAGAGATGGACAGCGTG...CAAAGGAAGCTTTAGCTTTGGCGTGGCGCTACTTTTTGCCTCCACACACGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222025.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCCTATGGCATGCTCTTCCATCTCACAGAAATGAGCTTGTTCTCAGATCCACACGCTGTCCATCTCTaGGAAGCGGCTGAGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LAYGMLFHLTEMSLFSDPHAVHL*EAAEQR Trigger: ACGCTGCTCAGCCGCTTCCAAGAGATGGACAGCGTG...TGGATCTGAGAACAAGCTCATTTCTGTGAGATGGAAGAGCATGCCATAGGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CAA 90 bp | CTAGACCCTCCCTCTGGTGCCACAAGTTCTGGGCTCGACAAGGTCTTACAGGAATGCGTTCATCAAGTCTaGCTGAAACCTGATGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDPPSGATSSGLDKVLQECVHQV*LKPDDF Trigger: GAAGTCATCAGGTTTCAGCAAGACTTGATGAACGCA...TTCCTGTAAGACCTTGTCGAGCCCAGAACTTGTGGCACCAGAGGGAGGGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CAA 90 bp | CCATGGGTCCCACCATCAAATAGACAGACAGACAGACAGACAGACAGACAGACACATTTTCTCTTCCTCTaGGGCGCAGTGAACTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWVPPSNRQTDRQTDRQTHFLFL*GAVNSA Trigger: AGCAGAGTTCACTGCGCCCAAGAGGAAGAGAAAATG...TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATTTGATGGTGGGACCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CAA 90 bp | TTGGCCTATGGCATGCTCTTCCATCTCACAGAAATGAGCTTGTTCTCAGATCCATGGCACAGCTGTGTGTaGTACAACCCGTACAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAYGMLFHLTEMSLFSDPWHSCV*YNPYRR Trigger: TCTTCTGTACGGGTTGTACAACACACAGCTGTGCCA...TGGATCTGAGAACAAGCTCATTTCTGTGAGATGGAAGAGCATGCCATAGGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CAA 90 bp | AGTAAGCTCCCAGCATTTACGATAGTGGGAGTATGCTTTTGTTTCTTGCAACTGTTCGGAGCGTTACCTTaGCTTCTGGAAGATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKLPAFTIVGVCFCFLQLFGALP*LLEDLF Trigger: GAAGAGATCTTCCAGAAGCAAAGGTAACGCTCCGAA...CAGTTGCAAGAAACAAAAGCATACTCCCACTATCGTAAATGCTGGGAGCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS-3UTR CAA 90 bp | GTCTTCACTGGCTACTTCCTGCTTAGAACACATGACACCTTTCTTCTGTTGGAATTTAAATTCCTCATTTaGCCACAGAAGATGGTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: VFTGYFLLRTHDTFLLLEFKFLI*PQKMVA Trigger: CGCGACCATCTTCTGTGGCAAAATGAGGAATTTAAA...TTCCAACAGAAGAAAGGTGTCATGTGTTCTAAGCAGGAAGTAGCCAGTGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS TCA 90 bp | CTCCTTTACCAGACTGAGAGCTCTGTCTGGCATGGACTTGTCTGCTaGAATAGCATGCTTCATATTTTGATAATGATCGTGAACATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLYQTESSVWHGLVC*NSMLHILIMIVNIQ Trigger: CTGAATGTTCACGATCATTATCAAAATATGAAGCATGCTATTTCAGCAGACAAGTCCATGCCAGACAGAGCTCTCAGTCTGGTAAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS CAA 90 bp | GCGCCAGAGCTCCGTGAAGTCCTCGAAGCGCACGCTGTCCATCTCTaGGAAGCGGCTGAGCAGCGTCTCGTAGTCAGTCTGCAGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: APELREVLEAHAVHL*EAAEQRLVVSLQAR Trigger: CCGGGCCTGCAGACTGACTACGAGACGCTGCTCAGCCGCTTCCAAGAGATGGACAGCGTGCGCTTCGAGGACTTCACGGAGCTCTGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000222025.2 |
||
| CDS TCA 72 bp | CCTCGAAGCGCACGCTGTCCATCTCTTGGAAGCGGCTaGGCAGCGTCTCGTAGTCAGTCTGCAGGCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PRSARCPSLGSG*AASRSQSAGPE Trigger: CTCCGGGCCTGCAGACTGACTACGAGACGCTGCTCAGCCGCTTCCAAGAGATGGACAGCGTGCGCTTCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000222025.2 |
||
| CDS CAA 72 bp | CTCCGTGAAGTCCTCGAAGCGCACGCTGTCCATCTCTaGGAAGCGGCTGAGCAGCGTCTCGTAGTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LREVLEAHAVHL*EAAEQRLVVSL Trigger: CAGACTGACTACGAGACGCTGCTCAGCCGCTTCCAAGAGATGGACAGCGTGCGCTTCGAGGACTTCACGGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000222025.2 |
||
| CDS TCA 72 bp | AGATGGTCGCGAACTTCATGCTGCGCCAGAGCTCCGTaGAGTCCTCGAAGCGCACGCTGTCCATCTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RWSRTSCCARAP*SPRSARCPSLG Trigger: TCCAAGAGATGGACAGCGTGCGCTTCGAGGACTTCACGGAGCTCTGGCGCAGCATGAAGTTCGCGACCATCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000222025.2 |
||
| CDS GCA 72 bp | TCAGCATTTTCTCTTCCTCTTGGGCGCAGTGAACTCTaGTTTTCTGACGCCACCCATGTCCTCCTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAFSLPLGRSEL*FSDATHVLLLL Trigger: GAGGAGGAGGAGGACATGGGTGGCGTCAGAAAAGCAGAGTTCACTGCGCCCAAGAGGAAGAGAAAATGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS CAA 90 bp | ACAAGCTCCAACAGGCCAAAGACGAGGGTCGGAAGAATGAGTCCTTaGCTTCTGGAAGATCTCTTCCTTCCTGCTGGTCCTGCTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSNRPKTRVGRMSP*LLEDLFLPAGPAGS Trigger: AGAACCAGCAGGACCAGCAGGAAGGAAGAGATCTTCCAGAAGCAAAGGACTCATTCTTCCGACCCTCGTCTTTGGCCTGTTGGAGCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS TCA 72 bp | GCCGCGTCGAAATGCTGTGCGTTCATCAAGTCTTGCTaGAACCTGATGACTTCATCCCAGTCCTTCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AASKCCAFIKSC*NLMTSSQSFKA Trigger: TGCCTTGAAGGACTGGGATGAAGTCATCAGGTTTCAGCAAGACTTGATGAACGCACAGCATTTCGACGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS TCA 72 bp | CAAGCTCCAACAGGCCAAAGACGAGGGTCGGAAGAATaGGTCCTTTGCTTCTGGAAGATCTCTTCCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QAPTGQRRGSEE*VLCFWKISSFL Trigger: CAGGAAGGAAGAGATCTTCCAGAAGCAAAGGACTCATTCTTCCGACCCTCGTCTTTGGCCTGTTGGAGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS CAA 72 bp | GACTTCATCCCAGTCCTTCAAGGCAACTCGGATCTTTaGTTTCGGCTGGCACAGCTGTGTGTTGTACAACCC | + |
|
Preference number: 6 (lower is better) Translates to: DFIPVLQGNSDL*FRLAQLCVVQP Trigger: GGGTTGTACAACACACAGCTGTGCCAGCCGAAACAAAAGATCCGAGTTGCCTTGAAGGACTGGGATGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS CAA 72 bp | AACAGGCCAAAGACGAGGGTCGGAAGAATGAGTCCTTaGCTTCTGGAAGATCTCTTCCTTCCTGCTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NRPKTRVGRMSP*LLEDLFLPAGP Trigger: AGGACCAGCAGGAAGGAAGAGATCTTCCAGAAGCAAAGGACTCATTCTTCCGACCCTCGTCTTTGGCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220882.2 |
||
| CDS CAA 90 bp | TTCAAGGCAACTCGGATCTTTTGTTTCGGCTGGCACAGCTGTGTGTaGTACAACCCGTACAGAAGATACAAAGCGCCAACTCTGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FKATRIFCFGWHSCV*YNPYRRYKAPTLIW Trigger: CCAGATCAGAGTTGGCGCTTTGTATCTTCTGTACGGGTTGTACAACACACAGCTGTGCCAGCCGAAACAAAAGATCCGAGTTGCCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS CAA 90 bp | AAACCTGATGACTTCATCCCAGTCCTTCAAGGCAACTCGGATCTTTaGTTTCGGCTGGCACAGCTGTGTGTTGTACAACCCGTACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KPDDFIPVLQGNSDL*FRLAQLCVVQPVQK Trigger: CTTCTGTACGGGTTGTACAACACACAGCTGTGCCAGCCGAAACAAAAGATCCGAGTTGCCTTGAAGGACTGGGATGAAGTCATCAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS CAA 90 bp | CCTGAAAACAAAAGCCGCGTCGAAATGCTGTGCGTTCATCAAGTCTaGCTGAAACCTGATGACTTCATCCCAGTCCTTCAAGGCAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: PENKSRVEMLCVHQV*LKPDDFIPVLQGNS Trigger: CGAGTTGCCTTGAAGGACTGGGATGAAGTCATCAGGTTTCAGCAAGACTTGATGAACGCACAGCATTTCGACGCGGCTTTTGTTTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS CAA 72 bp | ACTCGGATCTTTTGTTTCGGCTGGCACAGCTGTGTGTaGTACAACCCGTACAGAAGATACAAAGCGCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: TRIFCFGWHSCV*YNPYRRYKAPT Trigger: AGTTGGCGCTTTGTATCTTCTGTACGGGTTGTACAACACACAGCTGTGCCAGCCGAAACAAAAGATCCGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS CAA 72 bp | AAAAGCCGCGTCGAAATGCTGTGCGTTCATCAAGTCTaGCTGAAACCTGATGACTTCATCCCAGTCCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: KSRVEMLCVHQV*LKPDDFIPVLQ Trigger: TTGAAGGACTGGGATGAAGTCATCAGGTTTCAGCAAGACTTGATGAACGCACAGCATTTCGACGCGGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS GCA 72 bp | AAGCTTCCTGAAAACAAAAGCCGCGTCGAAATGCTGTaGGTTCATCAAGTCTTGCTGAAACCTGATGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: KLPENKSRVEML*VHQVLLKPDDF Trigger: GAAGTCATCAGGTTTCAGCAAGACTTGATGAACGCACAGCATTTCGACGCGGCTTTTGTTTTCAGGAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021532.6 |
||
| CDS TCA 72 bp | TTTAAGGAGGGATTCTTCCGTTCCTTGTGCCACTCCTaGTGCTCCAAAACTATGTTCTTAATGTTCTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FKEGFFRSLCHS*CSKTMFLMFSK Trigger: TTTTGAGAACATTAAGAACATAGTTTTGGAGCATCAGGAGTGGCACAAGGAACGGAAGAATCCCTCCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021532.6 ENSMUST00000220882.2 |
||