RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNAP91 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033419

Ensembl transcript IDs: ENSMUST00000036347.13, ENSMUST00000074468.13, ENSMUST00000074501.12, ENSMUST00000098495.10, ENSMUST00000191290.3, ENSMUST00000239074.2

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTaGGTTTGGTACTGGTGGCTCACTTTGAAACTGAGCATCAATCTT +
Preference number: 1 (lower is better)
Translates to: HSWAVCLGEEVTRQH*VWYWWLTLKLSINL
Trigger: AAGATTGATGCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR TCA 90 bp CTTTTACAAAGAGCTGCCAAGCCACTAAACAACACTGATCAACAGTaGCCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACA +
Preference number: 1 (lower is better)
Translates to: LLQRAAKPLNNTDQQ*PCVRIKIFSQAIGT
Trigger: TGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGATCAGTGTTGTTTAGTGGCTTGGCAGCTCTTTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CCA 90 bp GGTTTACTTCGTACAACACACAAAGAACCCGAATACGCTACGAGCTaGAAGAGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTC +
Preference number: 1 (lower is better)
Translates to: GLLRTTHKEPEYATS*KSRVTAKEYTFLMF
Trigger: GAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCTCTTCCAGCTCGTAGCGTATTCGGGTTCTTTGTGTGTTGTACGAAGTAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR TCA 90 bp ACCCAATATGCTTTTACAAAGAGCTGCCAAGCCACTAAACAACACTaGTCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGC +
Preference number: 1 (lower is better)
Translates to: TQYAFTKSCQATKQH*STVTLCTHQNLQPS
Trigger: GCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGATCAGTGTTGTTTAGTGGCTTGGCAGCTCTTTGTAAAAGCATATTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR TCA 90 bp TCAATCCTATCACAAAGGTACAATAGAAGTCACTTTGAGCTCAATTaGAGGATGGAGAAACACTACTCTATAGAACACACAAAGAAATAC +
Preference number: 1 (lower is better)
Translates to: SILSQRYNRSHFELN*RMEKHYSIEHTKKY
Trigger: GTATTTCTTTGTGTGTTCTATAGAGTAGTGTTTCTCCATCCTTCAATTGAGCTCAAAGTGACTTCTATTGTACCTTTGTGATAGGATTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGCTGGGCTGTGTGCTTaGGAGAGGAAGTTACGCGTC +
Preference number: 2 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGAGLCA*ERKLRV
Trigger: GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CAA 90 bp AGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTaGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGG +
Preference number: 2 (lower is better)
Translates to: RVHIPNVHCHSWAVC*GEEVTRQHWVWYWW
Trigger: CCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR GCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAATTCCTAATGTTCACTaGCACAGCTGGGCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGIPNVH*HSWAVC
Trigger: GCACACAGCCCAGCTGTGGCAGTGAACATTAGGAAT...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACCACAGCTGGGCTGTGTaGTTGGGAGAGGAAGTTACG +
Preference number: 2 (lower is better)
Translates to: RPRATSRKALKALEPFIHHSWAV*LGEEVT
Trigger: CGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTG...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGTCACCACAGAACAGCTaGGTCATCCTCCGTCCACGG +
Preference number: 2 (lower is better)
Translates to: INSDLVYASKSSAKPSAQSPQNS*VILRPR
Trigger: CCGTGGACGGAGGATGACGCAGCTGTTCTGTGGTGA...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGATGGGTTTGGTACTGGTaGCTCACTTTGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGWVWYW*LTLKLS
Trigger: GCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCA...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGTGGGTTTGGTACTGGTaGCTCACTTTGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: QNSCVILRPRATSRKALKWVWYW*LTLKLS
Trigger: GCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCA...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CAA 90 bp CTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTaGGTACTGGTGGCTCACTTTGAAACTGAGCATCAATCTTATCTG +
Preference number: 2 (lower is better)
Translates to: LGCVLGRGSYASALG*VLVAHFETEHQSYL
Trigger: CAGATAAGATTGATGCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAATGGGTTTGGTACTGGTaGCTCACTTTGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKWVWYW*LTLKLS
Trigger: GCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCA...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGGTTACGCGTCAGCACTaGGTTTGGTACTGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: INSDLVYASKSSAKPSAQVTRQH*VWYWWL
Trigger: GAGCCACCAGTACCAAACCCAGTGCTGACGCGTAAC...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCACGTCAGCACTGGGTTTaGTACTGGTGGCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: PRATSRKALKALEPFIHSRQHWV*YWWLTL
Trigger: CAAAGTGAGCCACCAGTACCAAACCCAGTGCTGACG...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTAGCATCAATCTTATCTaGAGTTTCCAAACTCAGGTT +
Preference number: 2 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTSINLI*SFQTQV
Trigger: AACCTGAGTTTGGAAACTTCAGATAAGATTGATGCT...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGTTACGCGTCAGCACTaGGTTTGGTACTGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKVTRQH*VWYWWL
Trigger: GAGCCACCAGTACCAAACCCAGTGCTGACGCGTAAC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR GCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTCACCACAGAACAGCTaGGTCATCCTCCGTCCACGG +
Preference number: 2 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVSPQNS*VILRPR
Trigger: CCGTGGACGGAGGATGACGCAGCTGTTCTGTGGTGA...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGCGTCAGCACTGGGTTTaGTACTGGTGGCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKRQHWV*YWWLTL
Trigger: CAAAGTGAGCCACCAGTACCAAACCCAGTGCTGACG...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGCTGGGCTGTGTGCTTaGGAGAGGAAGTTACGCGTC +
Preference number: 2 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSAGLCA*ERKLRV
Trigger: GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGAGTTGGAAGTTTCTGTaGTTGGAAAAATGTACTCCA +
Preference number: 2 (lower is better)
Translates to: INSDLVYASKSSAKPSAQSWKFL*LEKCTP
Trigger: TGGAGTACATTTTTCCAATCACAGAAACTTCCAACT...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCACAGCTGGGCTGTGTaGTTGGGAGAGGAAGTTACG +
Preference number: 2 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSHSWAV*LGEEVT
Trigger: CGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR GCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACACAGCTGGGCTGTGTaGTTGGGAGAGGAAGTTACG +
Preference number: 2 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSHSWAV*LGEEVT
Trigger: CGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTG...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGTTACGCGTCAGCACTaGGTTTGGTACTGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSVTRQH*VWYWWL
Trigger: GAGCCACCAGTACCAAACCCAGTGCTGACGCGTAAC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAACACTTTGAGCTCAATTaGAGGATGGAGAAACACTAC +
Preference number: 2 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKHFELN*RMEKHY
Trigger: GTAGTGTTTCTCCATCCTTCAATTGAGCTCAAAGTG...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAAACACATCTTTCCAAATaGCTCACCACAGAACAGCTG +
Preference number: 2 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKTHLSK*LTTEQL
Trigger: CAGCTGTTCTGTGGTGAGCCATTTGGAAAGATGTGT...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGTTCATGGGAGGACTTaGGTTTGTCCAAAAGTTATA +
Preference number: 2 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKVHGRT*VCPKVI
Trigger: TATAACTTTTGGACAAACTCAAGTCCTCCCATGAAC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR GCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAATTCCTAATGTTCACTaGCACAGCTGGGCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSIPNVH*HSWAVC
Trigger: GCACACAGCCCAGCTGTGGCAGTGAACATTAGGAAT...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAAGCATCAATCTTATCTaGAGTTTCCAAACTCAGGTT +
Preference number: 2 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKSINLI*SFQTQV
Trigger: AACCTGAGTTTGGAAACTTCAGATAAGATTGATGCT...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGTGGGTTTGGTACTGGTaGCTCACTTTGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQWVWYW*LTLKLS
Trigger: GCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCA...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCACTGGGTTTGGTACTaGTGGCTCACTTTGAAACTG +
Preference number: 2 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQHWVWY*WLTLKL
Trigger: CAGTTTCAAAGTGAGCCACCAGTACCAAACCCAGTG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAAGCATCAATCTTATCTaGAGTTTCCAAACTCAGGTT +
Preference number: 2 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSSINLI*SFQTQV
Trigger: AACCTGAGTTTGGAAACTTCAGATAAGATTGATGCT...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACAGCATCAATCTTATCTaGAGTTTCCAAACTCAGGTT +
Preference number: 2 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNSINLI*SFQTQV
Trigger: AACCTGAGTTTGGAAACTTCAGATAAGATTGATGCT...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR TCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTAGCATCAATCTTATCTaGAGTTTCCAAACTCAGGTT +
Preference number: 2 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFSINLI*SFQTQV
Trigger: AACCTGAGTTTGGAAACTTCAGATAAGATTGATGCT...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCCATTCATTCACTCATaGTTTACTTCGTACAACACA +
Preference number: 2 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQPFIHS*FTSYNT
Trigger: TGTGTTGTACGAAGTAAACCATGAGTGAATGAATGG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTCCATTCATTCACTCATaGTTTACTTCGTACAACACA +
Preference number: 2 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFPFIHS*FTSYNT
Trigger: TGTGTTGTACGAAGTAAACCATGAGTGAATGAATGG...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCATTCATTCACTCATaGTTTACTTCGTACAACACA +
Preference number: 2 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSPFIHS*FTSYNT
Trigger: TGTGTTGTACGAAGTAAACCATGAGTGAATGAATGG...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGAGCTGGGCTGTGTGCTaGGGAGAGGAAGTTACGCGT +
Preference number: 3 (lower is better)
Translates to: QNSCVILRPRATSRKALKSWAVC*GEEVTR
Trigger: ACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCT...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAAGCTGGGCTGTGTGCTaGGGAGAGGAAGTTACGCGT +
Preference number: 3 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGSWAVC*GEEVTR
Trigger: ACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCT...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR GCA 72 bp CACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTaGTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTT +
Preference number: 3 (lower is better)
Translates to: HIPNVHCHSWAV*LGEEVTRQHWV
Trigger: AACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CCA 72 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTaGTACTGGTGGCTCACTTTGAAACTGAGCATCAAT +
Preference number: 3 (lower is better)
Translates to: CLGEEVTRQHWV*YWWLTLKLSIN
Trigger: ATTGATGCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CCA 72 bp GGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTaGTGGCTCACTTTGAAACTGAGCATCAATCTTATC +
Preference number: 3 (lower is better)
Translates to: GEEVTRQHWVWY*WLTLKLSINLI
Trigger: GATAAGATTGATGCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR TCA 72 bp AGAGCTGCCAAGCCACTAAACAACACTGATCAACAGTaGCCTTGTGTACGCATCAAAATCTTCAGCCAAGCC +
Preference number: 3 (lower is better)
Translates to: RAAKPLNNTDQQ*PCVRIKIFSQA
Trigger: GGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGATCAGTGTTGTTTAGTGGCTTGGCAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CCA 72 bp CGTACAACACACAAAGAACCCGAATACGCTACGAGCTaGAAGAGCAGGGTAACAGCTAAAGAGTACACATTC +
Preference number: 3 (lower is better)
Translates to: RTTHKEPEYATS*KSRVTAKEYTF
Trigger: GAATGTGTACTCTTTAGCTGTTACCCTGCTCTTCCAGCTCGTAGCGTATTCGGGTTCTTTGTGTGTTGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCATACTGGTGGCTCACTTaGAAACTGAGCATCAATCTT +
Preference number: 3 (lower is better)
Translates to: PRATSRKALKALEPFIHSYWWLT*KLSINL
Trigger: AAGATTGATGCTCAGTTTCAAAGTGAGCCACCAGTA...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGTACTGGTGGCTCACTTaGAAACTGAGCATCAATCTT +
Preference number: 3 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGYWWLT*KLSINL
Trigger: AAGATTGATGCTCAGTTTCAAAGTGAGCCACCAGTA...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTAGCTGGGCTGTGTGCTaGGGAGAGGAAGTTACGCGT +
Preference number: 3 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFSWAVC*GEEVTR
Trigger: ACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCT...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGGCGTCAGCACTGGGTTaGGTACTGGTGGCTCACTTT +
Preference number: 3 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQASALG*VLVAHF
Trigger: AAAGTGAGCCACCAGTACCAAACCCAGTGCTGACGC...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGCGTCAGCACTGGGTTaGGTACTGGTGGCTCACTTT +
Preference number: 3 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSASALG*VLVAHF
Trigger: AAAGTGAGCCACCAGTACCAAACCCAGTGCTGACGC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR TCA 72 bp GCTTTTACAAAGAGCTGCCAAGCCACTAAACAACACTaGTCAACAGTGACCTTGTGTACGCATCAAAATCTT +
Preference number: 3 (lower is better)
Translates to: AFTKSCQATKQH*STVTLCTHQNL
Trigger: AAGATTTTGATGCGTACACAAGGTCACTGTTGATCAGTGTTGTTTAGTGGCTTGGCAGCTCTTTGTAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAAACAATAGAAGTCACTTaGAGCTCAATTGAAGGATGG +
Preference number: 3 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKTIEVT*SSIEGW
Trigger: CCATCCTTCAATTGAGCTCAAAGTGACTTCTATTGT...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CCA 72 bp AAAGCACTAAAGGCATTGGAACCATTCATTCACTCATaGTTTACTTCGTACAACACACAAAGAACCCGAATA +
Preference number: 3 (lower is better)
Translates to: KALKALEPFIHS*FTSYNTQRTRI
Trigger: TATTCGGGTTCTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGTACTGGTGGCTCACTTaGAAACTGAGCATCAATCTT +
Preference number: 3 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQYWWLT*KLSINL
Trigger: AAGATTGATGCTCAGTTTCAAAGTGAGCCACCAGTA...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR-3UTR CAA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTAGTTCATGGGAGGACTaGAGTTTGTCCAAAAGTTAT +
Preference number: 3 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVSSWED*SLSKSY
Trigger: ATAACTTTTGGACAAACTCAAGTCCTCCCATGAACT...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR TCA 72 bp TCACAAAGGTACAATAGAAGTCACTTTGAGCTCAATTaGAGGATGGAGAAACACTACTCTATAGAACACACA +
Preference number: 3 (lower is better)
Translates to: SQRYNRSHFELN*RMEKHYSIEHT
Trigger: TGTGTGTTCTATAGAGTAGTGTTTCTCCATCCTTCAATTGAGCTCAAAGTGACTTCTATTGTACCTTTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR TCA 72 bp TCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATaGCAACAAACTGAAAATCAAAGAATACATTATGTA +
Preference number: 3 (lower is better)
Translates to: SKSSAKPSAQTV*QQTENQRIHYV
Trigger: TACATAATGTATTCTTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGCCAGTCACGCTGTACTaGGCGGCGGCGATCCGATCC +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWPVTLY*AAAIRS
Trigger: GGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGG...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTGGCCGGGGTAGCTGGTaGGGTAGCCCCTTCGGATGC +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTGRGSW*GSPFGC
Trigger: GCATCCGAAGGGGCTACCGCACCAGCTACCCCGGCC...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTGGCCGGGGTAGCTGGTaGGGTAGCCCCTTCGGATGC +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAGRGSW*GSPFGC
Trigger: GCATCCGAAGGGGCTACCGCACCAGCTACCCCGGCC...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGGCAGTGGTGGTAGCTaGAGCGGCGGCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVGSGGS*SGGGGG
Trigger: ACCACCACCGCCGCCGCTGCAGCTACCACCACTGCC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGAATCCTGCTCCAGGTTaGCCAACGGACGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWNPAPG*PTDGAP
Trigger: CGGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATT...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGACCAGTCACGCTGTACTaGGCGGCGGCGATCCGATCC +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGPVTLY*AAAIRS
Trigger: GGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGG...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAACTGGGTGGGACCATTaGGACAGGGGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSTGWDH*DRGRLP
Trigger: GGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGT...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTGGTCATGCCTGTCCCTaGAGGAGGCGGGGGAACACC +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAGHACP*RRRGNT
Trigger: GGTGTTCCCCCGCCTCCTTCAGGGACAGGCATGACC...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000098495.10
CDS-3UTR GCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGGCACTACAGGTGCTaGTGCCCCCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVRHYRC*CPRSCS
Trigger: GGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCT...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCAGGTCGAGGCAGAGGCTaGAGCAGGCTCAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASAGRGRG*SRLSGC
Trigger: ACAACCACTGAGCCTGCTTCAGCCTCTGCCTCGACC...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGGCACCCGGAGGGACTaGGCTGGTTGGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGGTRRD*AGWWNS
Trigger: ACTGTTCCACCAACCAGCTCAGTCCCTCCGGGTGCC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATGCATCAAGAGCTaGAGCCACTGGGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: QNSCVILRPRATSRKALKACIKS*SHWGRG
Trigger: ACCCCGGCCCCAGTGGCTGCAGCTCTTGATGCATGC...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTGCATGCATCAAGAGCTaGAGCCACTGGGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTACIKS*SHWGRG
Trigger: ACCCCGGCCCCAGTGGCTGCAGCTCTTGATGCATGC...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCATGTGCCGGGCACAGCTaGAGCTCCAAAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSCAGHS*SSKGWP
Trigger: AGGCCACCCTTTGGAGCTGCAGCTGTGCCCGGCACA...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCTGTGCCGGGCACAGCTaGAGCTCCAAAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVCAGHS*SSKGWP
Trigger: AGGCCACCCTTTGGAGCTGCAGCTGTGCCCGGCACA...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGATGTGCCGGGCACAGCTaGAGCTCCAAAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGCAGHS*SSKGWP
Trigger: AGGCCACCCTTTGGAGCTGCAGCTGTGCCCGGCACA...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAAATCCTGCTCCAGGTTaGCCAACGGACGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKNPAPG*PTDGAP
Trigger: CGGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATT...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACCGTCACAGCTGTGGTaGTCGAGGCAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASAPSQLW*SRQRLK
Trigger: CTTCAGCCTCTGCCTCGACCACCACAGCTGTGACGG...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGCCGTCACAGCTGTGGTaGTCGAGGCAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWPSQLW*SRQRLK
Trigger: CTTCAGCCTCTGCCTCGACCACCACAGCTGTGACGG...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACAGCCGTCACAGCTGTaGTGGTCGAGGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSQPSQL*WSRQRL
Trigger: CAGCCTCTGCCTCGACCACCACAGCTGTGACGGCTG...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGTGGCTGCCACAGCCGTaGGAGCAGGAGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QNSCVILRPRATSRKALKWLPQP*EQEKEQ
Trigger: CTGCTCCTTCTCCTGCTCCCACGGCTGTGGCAGCCA...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGGCTAGGAGCCGCGTCTaGCTTAGGTGCTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWARSRV*LRCCSN
Trigger: GTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGC...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCATTGCAGGAGAGGCAGTaGATGCAGGAGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASALQERQ*MQETAL
Trigger: CAGCGCCGTCTCCTGCATCCACTGCCTCTCCTGCAA...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAGGCAGGCTGCCCGGATaGTGCCATGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSGRLPG*CHGWHQ
Trigger: CTGATGCCAACCATGGCACCATCCGGGCAGCCTGCC...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGGCAGGCTGCCCGGATaGTGCCATGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVGRLPG*CHGWHQ
Trigger: CTGATGCCAACCATGGCACCATCCGGGCAGCCTGCC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGGCAGGCTGCCCGGATaGTGCCATGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGGRLPG*CHGWHQ
Trigger: CTGATGCCAACCATGGCACCATCCGGGCAGCCTGCC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTGGTCGAGGCAGAGGCTaGAGCAGGCTCAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAGRGRG*SRLSGC
Trigger: ACAACCACTGAGCCTGCTTCAGCCTCTGCCTCGACC...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGAGGTCCAGCTCAGGTaGAGCCTCTGCGCTACCTTC +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVEVQLR*SLCATF
Trigger: GAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTGAGGTCCAGCTCAGGTaGAGCCTCTGCGCTACCTTC +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAEVQLR*SLCATF
Trigger: GAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTC...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGAGGAGAAGGAGCAGTTaGGGGAACTGGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWRRRSS*GNWRGC
Trigger: ACAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCT...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGACGAGGACTCCGCCTTTaGAGGAGAGGCAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGRGLRL*RRGSGC
Trigger: GCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCG...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCGAGGACTCCGCCTTTaGAGGAGAGGCAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVARGLRL*RRGSGC
Trigger: GCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCG...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGAGGCTGCCCGGATGGTaGCATGGTTGGCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWRLPGW*HGWHQK
Trigger: CTTCTGATGCCAACCATGGCACCATCCGGGCAGCCT...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCAAGGCTGCCCGGATGGTaGCATGGTTGGCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASARLPGW*HGWHQK
Trigger: CTTCTGATGCCAACCATGGCACCATCCGGGCAGCCT...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTGAGGCCTTTGCTGGCTaGCATTGCAGGACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTEAFAG*HCRTGW
Trigger: CCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTC...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAATGTGCCGGGCACAGCTaGAGCTCCAAAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKCAGHS*SSKGWP
Trigger: AGGCCACCCTTTGGAGCTGCAGCTGTGCCCGGCACA...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTTGGAGAAAGCTGTGTaGCGGGCACAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWLEKAV*RAQLQL
Trigger: GAGCTGCAGCTGTGCCCGGCACACAGCTTTCTCCAA...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGCCGTCACAGCTGTGGTaGTCGAGGCAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QNSCVILRPRATSRKALKPSQLW*SRQRLK
Trigger: CTTCAGCCTCTGCCTCGACCACCACAGCTGTGACGG...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAGCTAGGAGCCGCGTCTaGCTTAGGTGCTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSARSRV*LRCCSN
Trigger: GTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGC...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCATTGCAGGAGAGGCAGTaGATGCAGGAGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSLQERQ*MQETAL
Trigger: CAGCGCCGTCTCCTGCATCCACTGCCTCTCCTGCAA...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTTGCAGGAGAGGCAGTaGATGCAGGAGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTLQERQ*MQETAL
Trigger: CAGCGCCGTCTCCTGCATCCACTGCCTCTCCTGCAA...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCATTCCGAGGCCTTTGCTaGCTGCCATTGCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASAFRGLC*LPLQDW
Trigger: CCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAA...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTTCCGAGGCCTTTGCTaGCTGCCATTGCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWFRGLC*LPLQDW
Trigger: CCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAA...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACCCAGTCACGCTGTACTaGGCGGCGGCGATCCGATCC +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHPVTLY*AAAIRS
Trigger: GGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGG...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGGGCCCATCACCTCATaGGTGGTGGCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGGPITS*VVALQT
Trigger: AGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTGCTCGGCGACCTTaGGGAATTCAGACACCCTCG +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSLARRP*GIQTPS
Trigger: CGAGGGTGTCTGAATTCCTCAAGGTCGCCGAGCAAG...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCCTTGCTCGGCGACCTTaGGGAATTCAGACACCCTCG +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVLARRP*GIQTPS
Trigger: CGAGGGTGTCTGAATTCCTCAAGGTCGCCGAGCAAG...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCTGCTGGGAGCCTGTGTaGGGTCGGGAATGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVCWEPV*GRECHL
Trigger: AAGGTGACATTCCCGACCTCACACAGGCTCCCAGCA...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTAGGAGAAGGAGCAGTTaGGGGAACTGGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTRRRSS*GNWRGC
Trigger: ACAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCT...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCAGGTGGCAGCAGTGGCTaGCACAGCCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSGGSSG*HSRGSR
Trigger: CCTGCTCCCACGGCTGTGGCAGCCACTGCTGCCACC...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACACTTCCGAGGCCTTTaGTGGCTGCCATTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSHFRGL*WLPLQD
Trigger: GTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTG...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCAGGAGTGACTTTCGGTTaGCAGTTGGCTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASAGVTFG*QLAPPV
Trigger: GACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCC...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGGGAGTGACTTTCGGTTaGCAGTTGGCTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWGVTFG*QLAPPV
Trigger: GACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCC...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTTGGAGAAAGCTGTGTaGCGGGCACAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTLEKAV*RAQLQL
Trigger: GAGCTGCAGCTGTGCCCGGCACACAGCTTTCTCCAA...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAACCGTCACAGCTGTGGTaGTCGAGGCAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKPSQLW*SRQRLK
Trigger: CTTCAGCCTCTGCCTCGACCACCACAGCTGTGACGG...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGCTGAGCTGGAGTCACTaGCGTTGTAGAAGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWLSWSH*RCRRGH
Trigger: ATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAG...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: QNSCVILRPRATSRKALKARMVP*LASEDR
Trigger: GCGATCTTCTGATGCCAACCATGGCACCATCCGGGC...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVARMVP*LASEDR
Trigger: GCGATCTTCTGATGCCAACCATGGCACCATCCGGGC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCATTCCGAGGCCTTTGCTaGCTGCCATTGCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSFRGLC*LPLQDW
Trigger: CCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAA...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCAGGTGTAGGGCTTaGAGAAAGCTGTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKGRCRA*RKLCAG
Trigger: CCCGGCACACAGCTTTCTCCAAGCCCTACACCTGCC...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACCGCTAACGGGTCCTTaGCTGGAGGTTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSPLTGP*LEVSWD
Trigger: GTCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGG...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGACCGCTAACGGGTCCTTaGCTGGAGGTTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGPLTGP*LEVSWD
Trigger: GTCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGG...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCCAGTCACGCTGTACTaGGCGGCGGCGATCCGATCC +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGPVTLY*AAAIRS
Trigger: GGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGGCCCATCACCTCATaGGTGGTGGCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKGPITS*VVALQT
Trigger: AGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCC...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAATGCTGGGAGCCTGTGTaGGGTCGGGAATGTCACCTT +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKCWEPV*GRECHL
Trigger: AAGGTGACATTCCCGACCTCACACAGGCTCCCAGCA...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCATGCAGCAGGTTATTCTaGGCTGGAGTCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASACSRLF*AGVTGV
Trigger: AACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCA...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGACTGGGTGGGACCATTaGGACAGGGGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGTGWDH*DRGRLP
Trigger: GGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGT...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAGGTCATGCCTGTCCCTaGAGGAGGCATTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSGHACP*RRHSKS
Trigger: GGATTTGGAATGCCTCCTTCAGGGACAGGCATGACC...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAGGTGGCTTTGCAGACTaGTCTTGCTACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSGGFAD*SCYSRA
Trigger: GGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACC...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTGGTGGCTTTGCAGACTaGTCTTGCTACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAGGFAD*SCYSRA
Trigger: GGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACC...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCAAGCAGTGCATCGATCTaGCCCTGCAGGATTGGCATA +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASASSASI*PCRIGI
Trigger: TATGCCAATCCTGCAGGGGCAGATCGATGCACTGCT...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACCACTACAGGTGCTGCTaGCCCCGCAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHHYRCC*PRSCSR
Trigger: TCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTG...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGAGGCACTACAGGTGCTaGTGCCCCCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGRHYRC*CPRSCS
Trigger: GGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCT...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAACGCGTCTGGCTTAGGTaGTGCAGCAACTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKRVWLR*CSNFRS
Trigger: GCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCG...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCAGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASAGQKSC*LKSKAS
Trigger: CGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACC...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEETGAG*PDGAMV
Trigger: AACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTC...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTTTTGCTGGCTGCCATTaGAGGACTGGGTGGGACCAT +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAFAGCH*RTGWDH
Trigger: ATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAA...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGAATCCTGCTCCAGGTTaGCCAACGGACGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGNPAPG*PTDGAP
Trigger: CGGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATT...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCCCAGGTGCTTCTTCTTaGGGCCCATCACCTCATGAG +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVPGASS*GPSPHE
Trigger: CTCATGAGGTGATGGGCCCCAAGAAGAAGCACCTGG...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGACCAGGTGCTTCTTCTTaGGGCCCATCACCTCATGAG +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGPGASS*GPSPHE
Trigger: CTCATGAGGTGATGGGCCCCAAGAAGAAGCACCTGG...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCTGAGCTGGAGTCACTaGCGTTGTAGAAGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVALSWSH*RCRRGH
Trigger: ATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAG...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAAGGGTGTCGGCCATCTaGGGGATATTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSRVSAI*GILTLV
Trigger: GACCAATGTCAATATCCCTCAGATGGCCGACACCCT...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGGGTGTCGGCCATCTaGGGGATATTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVRVSAI*GILTLV
Trigger: GACCAATGTCAATATCCCTCAGATGGCCGACACCCT...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTAGGGTGTCGGCCATCTaGGGGATATTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVARVSAI*GILTLV
Trigger: GACCAATGTCAATATCCCTCAGATGGCCGACACCCT...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTTGGTGCAAATGGGTCTaGAATCGGTGCTTCACAGGG +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAWCKWV*NRCFTG
Trigger: CCCTGTGAAGCACCGATTTCAGACCCATTTGCACCA...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGTGCAGCAGGTTATTCTaGGCTGGAGTCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: QNSCVILRPRATSRKALKCSRLF*AGVTGV
Trigger: AACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCA...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTGGGCTGTGCAAACATaGCTGGCTGCTGAGACATCA +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTWAVQT*LAAETS
Trigger: TGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCA...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCATGGGCTGTGCAAACATaGCTGGCTGCTGAGACATCA +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSWAVQT*LAAETS
Trigger: TGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCA...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCAGGCACCCGGAGGGACTaGGCTGGTTGGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSGTRRD*AGWWNS
Trigger: ACTGTTCCACCAACCAGCTCAGTCCCTCCGGGTGCC...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTTTGCAGACTGCTCTTaGTACAGCAGAGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWFADCS*YSRASH
Trigger: GTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAA...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGCATCGATCTGCCCCTaGAGGATTGGCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVASICP*RIGILF
Trigger: GAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCACTACAGGTGCTGCTaGCCCCGCAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGHYRCC*PRSCSR
Trigger: TCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCACACTACAGGTGCTGCTaGCCCCGCAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSHYRCC*PRSCSR
Trigger: TCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTG...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGCTCAGGTGGCTTCATTaGAAAGAGGTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QNSCVILRPRATSRKALKLRWLH*KEVQLR
Trigger: CCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAG...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVGQKSC*LKSKAS
Trigger: CGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSGQKSC*LKSKAS
Trigger: CGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACC...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGGQKSC*LKSKAS
Trigger: CGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCAGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSETGAG*PDGAMV
Trigger: AACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTC...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACGAGGCCTTTGCTGGCTaGCATTGCAGGACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHEAFAG*HCRTGW
Trigger: CCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTC...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGTGTGCCGGGCACAGCTaGAGCTCCAAAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQCAGHS*SSKGWP
Trigger: AGGCCACCCTTTGGAGCTGCAGCTGTGCCCGGCACA...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAAGGCATTCCAAATCCTaGTCCAGGTTGCCCAACGGA +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSRHSKS*SRLPNG
Trigger: TCCGTTGGGCAACCTGGAGCAGGATTTGGAATGCCT...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTCCATCACCTCATGAGTaGTGGCTTTGCAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTPSPHE*WLCRLL
Trigger: GAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGG...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCATGCGCTACCTTCAGATaGGGCAAAAGGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASACATFR*GKRVIS
Trigger: GGAAATGACCCTTTTGCCCCATCTGAAGGTAGCGCA...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCGCTGGTCTCAGGTaGCTTCATTGCAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVSAGLR*LHCKEV
Trigger: GACCTCTTTGCAATGAAGCCACCTGAGACCAGCGCT...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCATGGCTGCCACAGCCGTaGGAGCAGGAGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSWLPQP*EQEKEQ
Trigger: CTGCTCCTTCTCCTGCTCCCACGGCTGTGGCAGCCA...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACGCTAGGAGCCGCGTCTaGCTTAGGTGCTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHARSRV*LRCCSN
Trigger: GTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGC...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGCCTGTGGTGCTGGCTaGGTTTCAGAAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKACGAG*VSEAPL
Trigger: AAGTGGTGCTTCTGAAACCCAGCCAGCACCACAGGC...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000239074.2
3UTR CAA 72 bp ATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTaGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IPNVHCHSWAVC*GEEVTRQHWVW
Trigger: CCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACGGGCCCATCACCTCATaGGTGGTGGCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHGPITS*VVALQT
Trigger: AGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCC...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGCATTTCCATGCACCATaGGATGGTGTGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWHFHAP*DGVWSL
Trigger: TAGTGACCACACACCATCTCATGGTGCATGGAAATG...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTAACATGACTGGCTGCTaGGACATCATGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTNMTGC*DIMVMP
Trigger: AGGCATGACCATGATGTCTCAGCAGCCAGTCATGTT...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCTTTGCAGACTGCTCTTaGTACAGCAGAGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVFADCS*YSRASH
Trigger: GTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAA...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCATTTGCAGACTGCTCTTaGTACAGCAGAGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSFADCS*YSRASH
Trigger: GTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAA...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTTTGCAGACTGCTCTTaGTACAGCAGAGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTFADCS*YSRASH
Trigger: GTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAA...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGCATCGATCTGCCCCTaGAGGATTGGCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKASICP*RIGILF
Trigger: GAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGC...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGGAGGTCCAGCTCAGGTaGAGCCTCTGCGCTACCTTC +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGEVQLR*SLCATF
Trigger: GAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTC...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGGTGGCAGCAGTGGCTaGCACAGCCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKGGSSG*HSRGSR
Trigger: CCTGCTCCCACGGCTGTGGCAGCCACTGCTGCCACC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGCACTTCCGAGGCCTTTaGTGGCTGCCATTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEHFRGL*WLPLQD
Trigger: GTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTG...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGTGCGCTACCTTCAGATaGGGCAAAAGGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: QNSCVILRPRATSRKALKCATFR*GKRVIS
Trigger: GGAAATGACCCTTTTGCCCCATCTGAAGGTAGCGCA...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAACTAGAAACAGCCTGTaGTGCTGGCTGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSTRNSL*CWLGFR
Trigger: TCTGAAACCCAGCCAGCACCACAGGCTGTTTCTAGT...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTACTAGAAACAGCCTGTaGTGCTGGCTGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTTRNSL*CWLGFR
Trigger: TCTGAAACCCAGCCAGCACCACAGGCTGTTTCTAGT...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGGGGCCCATCACCTCATaGGTGGTGGCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQGPITS*VVALQT
Trigger: AGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCC...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCCATTTCCATGCACCATaGGATGGTGTGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVHFHAP*DGVWSL
Trigger: TAGTGACCACACACCATCTCATGGTGCATGGAAATG...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCACCCCAAAAAGGTCTATaGCACCCGAGGACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSPQKGL*HPRTPP
Trigger: AGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGG...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCCCCAAAAAGGTCTATaGCACCCGAGGACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGPQKGL*HPRTPP
Trigger: AGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAACTGGGTGGGACCATTaGGACAGGGGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKTGWDH*DRGRLP
Trigger: GGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGT...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAAGGCACTACAGGTGCTaGTGCCCCCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKRHYRC*CPRSCS
Trigger: GGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCT...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGGGAGTGACTTTCGGTTaGCAGTTGGCTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEGVTFG*QLAPPV
Trigger: GACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCC...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCATGCAAATATGTCAACTaGCGGGGATGTGTCGATAGT +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASACKYVN*RGCVDS
Trigger: ACTATCGACACATCCCCGCCAGTTGACATATTTGCA...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGAGCAGTTGCGGGAACTaGAGGGGCTGTGCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGSSCGN*RGCASC
Trigger: ACAGCTAGCACAGCCCCTCCAGTTCCCGCAACTGCT...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCAAGCAGTTGCGGGAACTaGAGGGGCTGTGCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSSSCGN*RGCASC
Trigger: ACAGCTAGCACAGCCCCTCCAGTTCCCGCAACTGCT...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGCTGAGCTGGAGTCACTaGCGTTGTAGAAGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWELSWSH*RCRRGH
Trigger: ATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAG...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAGGTTATTCTGAGCTaGAGTCACTGGCGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAQVILS*SHWRCR
Trigger: TCTACAACGCCAGTGACTCCAGCTCAGAATAACCTG...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTAAGCTGCCTCGAAACTaGGTTGCAGCAGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAKLPRN*VAAGYS
Trigger: AGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTT...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAAAGCTGCCTCGAAACTaGGTTGCAGCAGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSKLPRN*VAAGYS
Trigger: AGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTT...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAACATTTCCATGCACCATaGGATGGTGTGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKHFHAP*DGVWSL
Trigger: TAGTGACCACACACCATCTCATGGTGCATGGAAATG...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCGCGTCTTTGCATTaGCCTTTCTTCATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVSASLH*PFFISK
Trigger: TTTCGAGATGAAGAAAGGTCAATGCAAAGACGCGCT...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCAAATCTCTCATTTCCATaGACCATGAGATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASANLSFP*TMRWCV
Trigger: CACACACCATCTCATGGTGCATGGAAATGAGAGATT...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACAGCAGTGCATCGATCTaGCCCTGCAGGATTGGCATA +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHSSASI*PCRIGI
Trigger: TATGCCAATCCTGCAGGGGCAGATCGATGCACTGCT...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACGGGAACAGAGGAAAGTaGAGCCAAGGAATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHGNRGK*SQGILS
Trigger: GGAGAGGATTCCTTGGCTGCACTTTCCTCTGTTCCC...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
CDS-3UTR GCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGGGCCGGGGTAGCTGGTaGGGTAGCCCCTTCGGATGC +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKGRGSW*GSPFGC
Trigger: GCATCCGAAGGGGCTACCGCACCAGCTACCCCGGCC...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGCATGCATCAAGAGCTaGAGCCACTGGGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKACIKS*SHWGRG
Trigger: ACCCCGGCCCCAGTGGCTGCAGCTCTTGATGCATGC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACCTCAGGTGGCTTCATTaGAAAGAGGTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHLRWLH*KEVQLR
Trigger: CCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAG...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGGGTGGCAGCAGTGGCTaGCACAGCCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKGGSSG*HSRGSR
Trigger: CCTGCTCCCACGGCTGTGGCAGCCACTGCTGCCACC...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCATTTGCTGGCTGCCATTaGAGGACTGGGTGGGACCAT +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSFAGCH*RTGWDH
Trigger: ATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAA...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGTTTGCTGGCTGCCATTaGAGGACTGGGTGGGACCAT +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQFAGCH*RTGWDH
Trigger: ATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAA...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACAGGCATTCCAAATCCTaGTCCAGGTTGCCCAACGGA +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHRHSKS*SRLPNG
Trigger: TCCGTTGGGCAACCTGGAGCAGGATTTGGAATGCCT...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACGGGAACAGAGGAAAGTaGAGCCAAGGAATCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHGNRGK*SQGISP
Trigger: TGGGGAGATTCCTTGGCTGCACTTTCCTCTGTTCCC...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACCCCTTTCTTCACTCTaGCAAAGTCAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSPLSSL*QSQMPS
Trigger: AGATGGCATTTGACTTTGCCAGAGTGAAGAAAGGGG...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCCCCTTTCTTCACTCTaGCAAAGTCAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVAPLSSL*QSQMPS
Trigger: AGATGGCATTTGACTTTGCCAGAGTGAAGAAAGGGG...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTCCCCTTTCTTCACTCTaGCAAAGTCAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTPLSSL*QSQMPS
Trigger: AGATGGCATTTGACTTTGCCAGAGTGAAGAAAGGGG...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGGAGCACCAGATGCTTaGTTGTTTCCAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGGAPDA*LFPGFF
Trigger: AAAGAAACCTGGAAACAACCAAGCATCTGGTGCTCC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
CDS-3UTR CCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCATGCAAATATGTCAACTaGCGGGGATGTGTCGATAGT +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSCKYVN*RGCVDS
Trigger: ACTATCGACACATCCCCGCCAGTTGACATATTTGCA...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAACAGCCGTCACAGCTGTaGTGGTCGAGGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKQPSQL*WSRQRL
Trigger: CAGCCTCTGCCTCGACCACCACAGCTGTGACGGCTG...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
3UTR CAA 72 bp GTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTaGGTACTGGTGGCTCACTTTGAAACTGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: VLGRGSYASALG*VLVAHFETEHQ
Trigger: TTGATGCTCAGTTTCAAAGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGTGGGCTGTGCAAACATaGCTGGCTGCTGAGACATCA +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQWAVQT*LAAETS
Trigger: TGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCA...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGTTTGCAGACTGCTCTTaGTACAGCAGAGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEFADCS*YSRASH
Trigger: GTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAA...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGCATGAGTGGTGGCTTTaGAGACTGCTCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEHEWWL*RLLLLQ
Trigger: CTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATG...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTAATCTCTCATTTCCATaGACCATGAGATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CVLGRGSYASALGLVLVANLSFP*TMRWCV
Trigger: CACACACCATCTCATGGTGCATGGAAATGAGAGATT...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAAATCTCTCATTTCCATaGACCATGAGATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSNLSFP*TMRWCV
Trigger: CACACACCATCTCATGGTGCATGGAAATGAGAGATT...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAAATCTCTCATTTCCATaGACCATGAGATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGNLSFP*TMRWCV
Trigger: CACACACCATCTCATGGTGCATGGAAATGAGAGATT...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTCTGGCAAAGTCAAATaGCATCTGTCTGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTSGKVK*HLSVGE
Trigger: TTCTCCTACAGACAGATGGCATTTGACTTTGCCAGA...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGAGCAGTGCATCGATCTaGCCCTGCAGGATTGGCATA +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQSSASI*PCRIGI
Trigger: TATGCCAATCCTGCAGGGGCAGATCGATGCACTGCT...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGGGCCGGGGTAGCTGGTaGGGTAGCCCCTTCGGATGC +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSGRGSW*GSPFGC
Trigger: GCATCCGAAGGGGCTACCGCACCAGCTACCCCGGCC...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAACTCAGGTGCAGCCTCTaGGCTACCTTCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKLRCSL*ATFRWG
Trigger: GCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAG...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGAGGTCCAGCTCAGGTaGAGCCTCTGCGCTACCTTC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKEVQLR*SLCATF
Trigger: GAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTCAGGTGGCTTCATTaGAAAGAGGTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGLRWLH*KEVQLR
Trigger: CCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTGGTGGCAGCAGTGGCTaGCACAGCCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVGGSSG*HSRGSR
Trigger: CCTGCTCCCACGGCTGTGGCAGCCACTGCTGCCACC...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGGGCAGTGGTGGTAGCTaGAGCGGCGGCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSGSGGS*SGGGGG
Trigger: ACCACCACCGCCGCCGCTGCAGCTACCACCACTGCC...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQGQKSC*LKSKAS
Trigger: CGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACC...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGGGGAACAGAGGAAAGTaGAGCCAAGGAATCTCCCCA +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQGNRGK*SQGISP
Trigger: TGGGGAGATTCCTTGGCTGCACTTTCCTCTGTTCCC...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCACCTCATGAGTGGTaGCTTTGCAGACTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHSPHEW*LCRLLL
Trigger: CAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGA...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCACTGCCCCTGCAGGATTaGCATACTCTTCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSLPLQD*HTLQEL
Trigger: AAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAG...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAATGCAAATATGTCAACTaGCGGGGATGTGTCGATAGT +
Preference number: 4 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKCKYVN*RGCVDS
Trigger: ACTATCGACACATCCCCGCCAGTTGACATATTTGCA...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAACAGCCGTCACAGCTGTaGTGGTCGAGGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKQPSQL*WSRQRL
Trigger: CAGCCTCTGCCTCGACCACCACAGCTGTGACGGCTG...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGAGCGCTGGTCTCAGGTaGCTTCATTGCAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGSAGLR*LHCKEV
Trigger: GACCTCTTTGCAATGAAGCCACCTGAGACCAGCGCT...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGACTAGAAACAGCCTGTaGTGCTGGCTGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWETRNSL*CWLGFR
Trigger: TCTGAAACCCAGCCAGCACCACAGGCTGTTTCTAGT...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACCATTTCCATGCACCATaGGATGGTGTGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: RPRATSRKALKALEPFIHHFHAP*DGVWSL
Trigger: TAGTGACCACACACCATCTCATGGTGCATGGAAATG...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTACTGGGTGGGACCATTaGGACAGGGGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVTGWDH*DRGRLP
Trigger: GGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGT...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGAACATGACTGGCTGCTaGGACATCATGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGNMTGC*DIMVMP
Trigger: AGGCATGACCATGATGTCTCAGCAGCCAGTCATGTT...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGGGCACCCGGAGGGACTaGGCTGGTTGGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKGTRRD*AGWWNS
Trigger: ACTGTTCCACCAACCAGCTCAGTCCCTCCGGGTGCC...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAGTTAGTTCATTTGGATaGACATCAAACTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSVSSFG*TSNSSS
Trigger: ACTGCTGGAGTTTGATGTGCATCCAAATGAACTAAC...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTTTCTAGCGCGTCTTTaGATTGACCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTFLARL*IDLSSS
Trigger: AGATGAAGAAAGGTCAATGCAAAGACGCGCTAGAAA...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAACTCAGGTGCAGCCTCTaGGCTACCTTCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKLRCSL*ATFRWG
Trigger: GCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAG...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCGGCAGTGGTGGTAGCTaGAGCGGCGGCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSGSGGS*SGGGGG
Trigger: ACCACCACCGCCGCCGCTGCAGCTACCACCACTGCC...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGGCAGTGGTGGTAGCTaGAGCGGCGGCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSGSGGS*SGGGGG
Trigger: ACCACCACCGCCGCCGCTGCAGCTACCACCACTGCC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAACGCGTCTGGCTTAGGTaGTGCAGCAACTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKRVWLR*CSNFRS
Trigger: GCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCG...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGTCACCTCATGAGTGGTaGCTTTGCAGACTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQSPHEW*LCRLLL
Trigger: CAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGA...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCAGTCGATAGTTTTAGCTaGTGTAGAATTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: CSLPQLGCVLGRGSYASAVDSFS*CRIRRC
Trigger: ACATCTCCTAATTCTACACCAGCTAAAACTATCGAC...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAAGCAGTTGCGGGAACTaGAGGGGCTGTGCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKSSCGN*RGCASC
Trigger: ACAGCTAGCACAGCCCCTCCAGTTCCCGCAACTGCT...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGCAGGTTATTCTGAGCTaGAGTCACTGGCGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEQVILS*SHWRCR
Trigger: TCTACAACGCCAGTGACTCCAGCTCAGAATAACCTG...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGCTGTGCAAACATGACTaGCTGCTGAGACATCATGGT +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWELCKHD*LLRHHG
Trigger: ACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAG...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCCAGTCACGCTGTACTaGGCGGCGGCGATCCGATCC +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNPVTLY*AAAIRS
Trigger: GGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGG...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCATTTCCATGCACCATaGGATGGTGTGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGHFHAP*DGVWSL
Trigger: TAGTGACCACACACCATCTCATGGTGCATGGAAATG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAACTTGCTCGGCGACCTTaGGGAATTCAGACACCCTCG +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKLARRP*GIQTPS
Trigger: CGAGGGTGTCTGAATTCCTCAAGGTCGCCGAGCAAG...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGGGTCGAGGCAGAGGCTaGAGCAGGCTCAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKGRGRG*SRLSGC
Trigger: ACAACCACTGAGCCTGCTTCAGCCTCTGCCTCGACC...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACTGGGTGGGACCATTaGGACAGGGGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQTGWDH*DRGRLP
Trigger: GGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGT...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGGTCATGCCTGTCCCTaGAGGAGGCATTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKGHACP*RRHSKS
Trigger: GGATTTGGAATGCCTCCTTCAGGGACAGGCATGACC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGGTGGCTTTGCAGACTaGTCTTGCTACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKGGFAD*SCYSRA
Trigger: GGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTCACTACAGGTGCTGCTaGCCCCGCAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVHYRCC*PRSCSR
Trigger: TCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTG...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGAGGCACTACAGGTGCTaGTGCCCCCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQRHYRC*CPRSCS
Trigger: GGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCT...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTAGGCACTACAGGTGCTaGTGCCCCCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFRHYRC*CPRSCS
Trigger: GGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCT...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAAAGGAGAAGGAGCAGTTaGGGGAACTGGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKRRRSS*GNWRGC
Trigger: ACAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCT...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVETGAG*PDGAMV
Trigger: AACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTC...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSETGAG*PDGAMV
Trigger: AACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTC...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAATTGGAGAAAGCTGTGTaGCGGGCACAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKLEKAV*RAQLQL
Trigger: GAGCTGCAGCTGTGCCCGGCACACAGCTTTCTCCAA...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGTCGATAGTTTTAGCTaGTGTAGAATTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGVDSFS*CRIRRC
Trigger: ACATCTCCTAATTCTACACCAGCTAAAACTATCGAC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGTCGATAGTTTTAGCTaGTGTAGAATTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LMFTATAGLCAWERKLRVVDSFS*CRIRRC
Trigger: ACATCTCCTAATTCTACACCAGCTAAAACTATCGAC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAACCGCTAACGGGTCCTTaGCTGGAGGTTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKPLTGP*LEVSWD
Trigger: GTCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGG...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGAGCGCGTCTTTGCATTaGCCTTTCTTCATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGSASLH*PFFISK
Trigger: TTTCGAGATGAAGAAAGGTCAATGCAAAGACGCGCT...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCAAGCGCGTCTTTGCATTaGCCTTTCTTCATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: PRATSRKALKALEPFIHSSASLH*PFFISK
Trigger: TTTCGAGATGAAGAAAGGTCAATGCAAAGACGCGCT...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAATGCAGCAGGTTATTCTaGGCTGGAGTCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKCSRLF*AGVTGV
Trigger: AACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCA...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAAGGTCATGCCTGTCCCTaGAGGAGGCATTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKGHACP*RRHSKS
Trigger: GGATTTGGAATGCCTCCTTCAGGGACAGGCATGACC...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGGCATGCATCAAGAGCTaGAGCCACTGGGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQACIKS*SHWGRG
Trigger: ACCCCGGCCCCAGTGGCTGCAGCTCTTGATGCATGC...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGAGGAGAAGGAGCAGTTaGGGGAACTGGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKRRRSS*GNWRGC
Trigger: ACAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCT...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTCGAGGACTCCGCCTTTaGAGGAGAGGCAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVRGLRL*RRGSGC
Trigger: GCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCG...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNETGAG*PDGAMV
Trigger: AACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTC...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAAGGAGTGACTTTCGGTTaGCAGTTGGCTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKGVTFG*QLAPPV
Trigger: GACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCC...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAAGGCATTCCAAATCCTaGTCCAGGTTGCCCAACGGA +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKRHSKS*SRLPNG
Trigger: TCCGTTGGGCAACCTGGAGCAGGATTTGGAATGCCT...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGCCCCTTTCTTCACTCTaGCAAAGTCAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQPLSSL*QSQMPS
Trigger: AGATGGCATTTGACTTTGCCAGAGTGAAGAAAGGGG...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAACTGCCCCTGCAGGATTaGCATACTCTTCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKLPLQD*HTLQEL
Trigger: AAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAG...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGGGAGCACCAGATGCTTaGTTGTTTCCAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGGAPDA*LFPGFF
Trigger: AAAGAAACCTGGAAACAACCAAGCATCTGGTGCTCC...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
CDS-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCAGCCGTCACAGCTGTaGTGGTCGAGGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQQPSQL*WSRQRL
Trigger: CAGCCTCTGCCTCGACCACCACAGCTGTGACGGCTG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAAGCGCTGGTCTCAGGTaGCTTCATTGCAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKSAGLR*LHCKEV
Trigger: GACCTCTTTGCAATGAAGCCACCTGAGACCAGCGCT...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTTGGCTGCCACAGCCGTaGGAGCAGGAGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFWLPQP*EQEKEQ
Trigger: CTGCTCCTTCTCCTGCTCCCACGGCTGTGGCAGCCA...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCTGGCTGCCACAGCCGTaGGAGCAGGAGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSWLPQP*EQEKEQ
Trigger: CTGCTCCTTCTCCTGCTCCCACGGCTGTGGCAGCCA...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAAGCCTGTGGTGCTGGCTaGGTTTCAGAAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKACGAG*VSEAPL
Trigger: AAGTGGTGCTTCTGAAACCCAGCCAGCACCACAGGC...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCGGCAGGCTGCCCGGATaGTGCCATGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSGRLPG*CHGWHQ
Trigger: CTGATGCCAACCATGGCACCATCCGGGCAGCCTGCC...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACGGCAGGCTGCCCGGATaGTGCCATGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNGRLPG*CHGWHQ
Trigger: CTGATGCCAACCATGGCACCATCCGGGCAGCCTGCC...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTGGGCCCATCACCTCATaGGTGGTGGCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVGPITS*VVALQT
Trigger: AGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCC...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTCTTGCTCGGCGACCTTaGGGAATTCAGACACCCTCG +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVLARRP*GIQTPS
Trigger: CGAGGGTGTCTGAATTCCTCAAGGTCGCCGAGCAAG...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTGGTCGAGGCAGAGGCTaGAGCAGGCTCAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFGRGRG*SRLSGC
Trigger: ACAACCACTGAGCCTGCTTCAGCCTCTGCCTCGACC...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGCCCCAAAAAGGTCTATaGCACCCGAGGACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSPQKGL*HPRTPP
Trigger: AGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGG...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGTCTGGCAAAGTCAAATaGCATCTGTCTGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQSGKVK*HLSVGE
Trigger: TTCTCCTACAGACAGATGGCATTTGACTTTGCCAGA...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAAAGCAGTGCATCGATCTaGCCCTGCAGGATTGGCATA +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKSSASI*PCRIGI
Trigger: TATGCCAATCCTGCAGGGGCAGATCGATGCACTGCT...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGTTTCTAGCGCGTCTTTaGATTGACCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEFLARL*IDLSSS
Trigger: AGATGAAGAAAGGTCAATGCAAAGACGCGCTAGAAA...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCTCAGGTGCAGCCTCTaGGCTACCTTCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQLRCSL*ATFRWG
Trigger: GCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTCTCAGGTGCAGCCTCTaGGCTACCTTCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFLRCSL*ATFRWG
Trigger: GCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAG...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGCGCGTCTGGCTTAGGTaGTGCAGCAACTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSRVWLR*CSNFRS
Trigger: GCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCG...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACGAGGACTCCGCCTTTaGAGGAGAGGCAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSRGLRL*RRGSGC
Trigger: GCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCG...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAGGCTGCCCGGATGGTaGCATGGTTGGCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSRLPGW*HGWHQK
Trigger: CTTCTGATGCCAACCATGGCACCATCCGGGCAGCCT...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCGAGGCCTTTGCTGGCTaGCATTGCAGGACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSEAFAG*HCRTGW
Trigger: CCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTC...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGGAGGCCTTTGCTGGCTaGCATTGCAGGACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQEAFAG*HCRTGW
Trigger: CCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTC...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGAGGCCTTTGCTGGCTaGCATTGCAGGACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSEAFAG*HCRTGW
Trigger: CCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGGGAGTGACTTTCGGTTaGCAGTTGGCTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKGVTFG*QLAPPV
Trigger: GACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCC...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACGCTAGGAGCCGCGTCTaGCTTAGGTGCTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNARSRV*LRCCSN
Trigger: GTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGC...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTTCCGAGGCCTTTGCTaGCTGCCATTGCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVFRGLC*LPLQDW
Trigger: CCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAA...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTGGCAGGTGTAGGGCTTaGAGAAAGCTGTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFGRCRA*RKLCAG
Trigger: CCCGGCACACAGCTTTCTCCAAGCCCTACACCTGCC...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGGCAGGTGTAGGGCTTaGAGAAAGCTGTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSGRCRA*RKLCAG
Trigger: CCCGGCACACAGCTTTCTCCAAGCCCTACACCTGCC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACGGCAGGTGTAGGGCTTaGAGAAAGCTGTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNGRCRA*RKLCAG
Trigger: CCCGGCACACAGCTTTCTCCAAGCCCTACACCTGCC...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCTGCTGGGAGCCTGTGTaGGGTCGGGAATGTCACCTT +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSCWEPV*GRECHL
Trigger: AAGGTGACATTCCCGACCTCACACAGGCTCCCAGCA...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCATGGTGCAAATGGGTCTaGAATCGGTGCTTCACAGGG +
Preference number: 4 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPWCKWV*NRCFTG
Trigger: CCCTGTGAAGCACCGATTTCAGACCCATTTGCACCA...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCCCCAAAAAGGTCTATaGCACCCGAGGACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQPQKGL*HPRTPP
Trigger: AGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCAGCATCGATCTGCCCCTaGAGGATTGGCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPASICP*RIGILF
Trigger: GAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGC...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGGTTAGTTCATTTGGATaGACATCAAACTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQVSSFG*TSNSSS
Trigger: ACTGCTGGAGTTTGATGTGCATCCAAATGAACTAAC...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATCAACAGTGACCTTGTGTACGCATCAAAATCTTCAGCCAAGCCATCGGCACAGTTTCTAGCGCGTCTTTaGATTGACCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: INSDLVYASKSSAKPSAQFLARL*IDLSSS
Trigger: AGATGAAGAAAGGTCAATGCAAAGACGCGCTAGAAA...CTGTGCCGATGGCTTGGCTGAAGATTTTGATGCGTACACAAGGTCACTGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGGGGAACAGAGGAAAGTaGAGCCAAGGAATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKGNRGK*SQGILS
Trigger: GGAGAGGATTCCTTGGCTGCACTTTCCTCTGTTCCC...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCGCGTCTGGCTTAGGTaGTGCAGCAACTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQRVWLR*CSNFRS
Trigger: GCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGAGGCTGCCCGGATGGTaGCATGGTTGGCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQRLPGW*HGWHQK
Trigger: CTTCTGATGCCAACCATGGCACCATCCGGGCAGCCT...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAGGCTGCCCGGATGGTaGCATGGTTGGCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSRLPGW*HGWHQK
Trigger: CTTCTGATGCCAACCATGGCACCATCCGGGCAGCCT...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTCACTTCCGAGGCCTTTaGTGGCTGCCATTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFHFRGL*WLPLQD
Trigger: GTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTG...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCACTTCCGAGGCCTTTaGTGGCTGCCATTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSHFRGL*WLPLQD
Trigger: GTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGTTGGAGAAAGCTGTGTaGCGGGCACAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQLEKAV*RAQLQL
Trigger: GAGCTGCAGCTGTGCCCGGCACACAGCTTTCTCCAA...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTCCAGGTGCTTCTTCTTaGGGCCCATCACCTCATGAG +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVPGASS*GPSPHE
Trigger: CTCATGAGGTGATGGGCCCCAAGAAGAAGCACCTGG...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACAGCAGTTGCGGGAACTaGAGGGGCTGTGCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNSSCGN*RGCASC
Trigger: ACAGCTAGCACAGCCCCTCCAGTTCCCGCAACTGCT...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAAAGCTGCCTCGAAACTaGGTTGCAGCAGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKKLPRN*VAAGYS
Trigger: AGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTT...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQARMVP*LASEDR
Trigger: GCGATCTTCTGATGCCAACCATGGCACCATCCGGGC...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNARMVP*LASEDR
Trigger: GCGATCTTCTGATGCCAACCATGGCACCATCCGGGC...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSARMVP*LASEDR
Trigger: GCGATCTTCTGATGCCAACCATGGCACCATCCGGGC...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCATTCCGAGGCCTTTGCTaGCTGCCATTGCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSFRGLC*LPLQDW
Trigger: CCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAA...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCAAACATGACTGGCTGCTaGGACATCATGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPNMTGC*DIMVMP
Trigger: AGGCATGACCATGATGTCTCAGCAGCCAGTCATGTT...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGGTGGCTTTGCAGACTaGTCTTGCTACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSGGFAD*SCYSRA
Trigger: GGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTCTCAGGTGGCTTCATTaGAAAGAGGTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVLRWLH*KEVQLR
Trigger: CCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAG...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACTTTGCTGGCTGCCATTaGAGGACTGGGTGGGACCAT +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNFAGCH*RTGWDH
Trigger: ATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAA...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAAAAATTGCAGCTGTGTaGCGGGCACAGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSKIAAV*RAQLQL
Trigger: GAGCTGCAGCTGTGCCCGGCACACAGCTGCAATTTT...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074501.12
CDS-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCCAGGTGCTTCTTCTTaGGGCCCATCACCTCATGAG +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQPGASS*GPSPHE
Trigger: CTCATGAGGTGATGGGCCCCAAGAAGAAGCACCTGG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAATGCAAATATGTCAACTaGCGGGGATGTGTCGATAGT +
Preference number: 4 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKCKYVN*RGCVDS
Trigger: ACTATCGACACATCCCCGCCAGTTGACATATTTGCA...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGTGCGCTACCTTCAGATaGGGCAAAAGGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKCATFR*GKRVIS
Trigger: GGAAATGACCCTTTTGCCCCATCTGAAGGTAGCGCA...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTGCCTGTGGTGCTGGCTaGGTTTCAGAAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFACGAG*VSEAPL
Trigger: AAGTGGTGCTTCTGAAACCCAGCCAGCACCACAGGC...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCTGAGCTGGAGTCACTaGCGTTGTAGAAGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQLSWSH*RCRRGH
Trigger: ATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAACTGTGCAAACATGACTaGCTGCTGAGACATCATGGT +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKLCKHD*LLRHHG
Trigger: ACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAG...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAAGGGTGTCGGCCATCTaGGGGATATTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSRVSAI*GILTLV
Trigger: GACCAATGTCAATATCCCTCAGATGGCCGACACCCT...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACAGGGTGTCGGCCATCTaGGGGATATTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNRVSAI*GILTLV
Trigger: GACCAATGTCAATATCCCTCAGATGGCCGACACCCT...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGTGGTGCAAATGGGTCTaGAATCGGTGCTTCACAGGG +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQWCKWV*NRCFTG
Trigger: CCCTGTGAAGCACCGATTTCAGACCCATTTGCACCA...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCATGGTGCAAATGGGTCTaGAATCGGTGCTTCACAGGG +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSWCKWV*NRCFTG
Trigger: CCCTGTGAAGCACCGATTTCAGACCCATTTGCACCA...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCATGCAGCAGGTTATTCTaGGCTGGAGTCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSCSRLF*AGVTGV
Trigger: AACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCA...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAACATGACTGGCTGCTaGGACATCATGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSNMTGC*DIMVMP
Trigger: AGGCATGACCATGATGTCTCAGCAGCCAGTCATGTT...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGTGGGCTGTGCAAACATaGCTGGCTGCTGAGACATCA +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQWAVQT*LAAETS
Trigger: TGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCA...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTTGGGCTGTGCAAACATaGCTGGCTGCTGAGACATCA +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFWAVQT*LAAETS
Trigger: TGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCA...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGCATGAGTGGTGGCTTTaGAGACTGCTCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSHEWWL*RLLLLQ
Trigger: CTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATG...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACGCATCGATCTGCCCCTaGAGGATTGGCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNASICP*RIGILF
Trigger: GAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGC...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCTGCCCCTGCAGGATTaGCATACTCTTCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQLPLQD*HTLQEL
Trigger: AAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCTGCCCCTGCAGGATTaGCATACTCTTCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSLPLQD*HTLQEL
Trigger: AAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGCAGGTTATTCTGAGCTaGAGTCACTGGCGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKQVILS*SHWRCR
Trigger: TCTACAACGCCAGTGACTCCAGCTCAGAATAACCTG...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCACTGTGCAAACATGACTaGCTGCTGAGACATCATGGT +
Preference number: 4 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPLCKHD*LLRHHG
Trigger: ACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAG...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGCATGAGTGGTGGCTTTaGAGACTGCTCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQHEWWL*RLLLLQ
Trigger: CTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATG...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCATGAGTGGTGGCTTTaGAGACTGCTCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSHEWWL*RLLLLQ
Trigger: CTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCATGAGTGGTGGCTTTaGAGACTGCTCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNHEWWL*RLLLLQ
Trigger: CTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATG...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTTCACCTCATGAGTGGTaGCTTTGCAGACTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFSPHEW*LCRLLL
Trigger: CAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGA...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCTCACCTCATGAGTGGTaGCTTTGCAGACTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSSPHEW*LCRLLL
Trigger: CAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGA...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGTGCGCTACCTTCAGATaGGGCAAAAGGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQCATFR*GKRVIS
Trigger: GGAAATGACCCTTTTGCCCCATCTGAAGGTAGCGCA...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAGCGCGTCTTTGCATTaGCCTTTCTTCATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSSASLH*PFFISK
Trigger: TTTCGAGATGAAGAAAGGTCAATGCAAAGACGCGCT...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGTCTGGCAAAGTCAAATaGCATCTGTCTGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKSGKVK*HLSVGE
Trigger: TTCTCCTACAGACAGATGGCATTTGACTTTGCCAGA...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAATTTCTAGCGCGTCTTTaGATTGACCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKFLARL*IDLSSS
Trigger: AGATGAAGAAAGGTCAATGCAAAGACGCGCTAGAAA...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTCCCCTTTCTTCACTCTaGCAAAGTCAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVPLSSL*QSQMPS
Trigger: AGATGGCATTTGACTTTGCCAGAGTGAAGAAAGGGG...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCAGGTTATTCTGAGCTaGAGTCACTGGCGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSQVILS*SHWRCR
Trigger: TCTACAACGCCAGTGACTCCAGCTCAGAATAACCTG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGAAGCTGCCTCGAAACTaGGTTGCAGCAGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQKLPRN*VAAGYS
Trigger: AGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTT...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTAAGCTGCCTCGAAACTaGGTTGCAGCAGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFKLPRN*VAAGYS
Trigger: AGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTT...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCTGTGCAAACATGACTaGCTGCTGAGACATCATGGT +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSLCKHD*LLRHHG
Trigger: ACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR TCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAGCGCGTCTTTGCATTaGCCTTTCTTCATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSSASLH*PFFISK
Trigger: TTTCGAGATGAAGAAAGGTCAATGCAAAGACGCGCT...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCAGTTAGTTCATTTGGATaGACATCAAACTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPVSSFG*TSNSSS
Trigger: ACTGCTGGAGTTTGATGTGCATCCAAATGAACTAAC...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAATCTCTCATTTCCATaGACCATGAGATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSNLSFP*TMRWCV
Trigger: CACACACCATCTCATGGTGCATGGAAATGAGAGATT...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCTCTGGCAAAGTCAAATaGCATCTGTCTGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSSGKVK*HLSVGE
Trigger: TTCTCCTACAGACAGATGGCATTTGACTTTGCCAGA...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGGTTAGTTCATTTGGATaGACATCAAACTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQVSSFG*TSNSSS
Trigger: ACTGCTGGAGTTTGATGTGCATCCAAATGAACTAAC...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR GCA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGTTTCTAGCGCGTCTTTaGATTGACCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQFLARL*IDLSSS
Trigger: AGATGAAGAAAGGTCAATGCAAAGACGCGCTAGAAA...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CCA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCGTCGATAGTTTTAGCTaGTGTAGAATTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSVDSFS*CRIRRC
Trigger: ACATCTCCTAATTCTACACCAGCTAAAACTATCGAC...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp GTCATGCCTGTCCCTGAAGGAGGCATTCCAAATCCTGCTCCAGGTTaGCCAACGGACGGGGCCCCGGCACCCGGAGGGACTGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: VMPVPEGGIPNPAPG*PTDGAPAPGGTELV
Trigger: AACCAGCTCAGTCCCTCCGGGTGCCGGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATTTGGAATGCCTCCTTCAGGGACAGGCATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS TCA 90 bp CAGGAGACGGCGCTGCAAATGCGTCCACAGATAAGAGGTCAGCAGTaGGAGAACTCTCAGGCACCGGAGAGGCCCCTCGTGGCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: QETALQMRPQIRGQQ*ENSQAPERPLVAGR
Trigger: CCTCCCCGCCACGAGGGGCCTCTCCGGTGCCTGAGAGTTCTCTCACTGCTGACCTCTTATCTGTGGACGCATTTGCAGCGCCGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp GCTGCCATTGCAGGACTGGGTGGGACCATTGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTTGGCATCAGAAGATCGCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: AAIAGLGGTIETGAG*PDGAMVGIRRSPDG
Trigger: CCCATCAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTCCTGCAATGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS GCA 90 bp CTTGGGGCCCATCACCTCATGAGTGGTGGCTTTGCAGACTGCTCTTaGTACAGCAGAGCCAGTCACGCTGTACTGAGCGGCGGCGATCCG +
Preference number: 5 (lower is better)
Translates to: LGAHHLMSGGFADCS*YSRASHAVLSGGDP
Trigger: CGGATCGCCGCCGCTCAGTACAGCGTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS TCA 90 bp TCCCTGAAGGAGGCGGGGGAACACCCGCTGACCATGTGGCTGGAGTaGCTTTCGGTTGCCAGTTGGCTCCACCAGTCAGCTTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SLKEAGEHPLTMWLE*LSVASWLHQSAFSP
Trigger: GGGAGAAAAAGCTGACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCAGCCACATGGTCAGCGGGTGTTCCCCCGCCTCCTTCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000098495.10
CDS GCA 90 bp GCCGGGCACAGCTGCAGCTCCAAAGGGTGGCCTCATCATGGGCTGTaGAAACATGACTGGCTGCTGAGACATCATGGTCATGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: AGHSCSSKGWPHHGL*KHDWLLRHHGHACP
Trigger: GGGACAGGCATGACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCATGATGAGGCCACCCTTTGGAGCTGCAGCTGTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp GCTGCCATTGCAGGACTGGGTGGGACCATTGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTTGGCATCAGAAGATCGCCTAAACCA +
Preference number: 5 (lower is better)
Translates to: AAIAGLGGTIETGAG*PDGAMVGIRRSPKP
Trigger: TGGTTTAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTCCTGCAATGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 90 bp GAGGTCAGCAGTGAGAGAACTCTCAGGCACCGGAGAGGCCCCTCGTaGCGGGGAGGAGAAAGCATCTGTGCCAAACAGGTCTATGCTAGG +
Preference number: 5 (lower is better)
Translates to: EVSSERTLRHRRGPS*RGGESICAKQVYAR
Trigger: CCTAGCATAGACCTGTTTGGCACAGATGCTTTCTCCTCCCCGCCACGAGGGGCCTCTCCGGTGCCTGAGAGTTCTCTCACTGCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 90 bp TGGGTGGGACCATTGAGACAGGGGCAGGCTGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGCCTGATGGGTCAAAAGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WVGPLRQGQAARMVP*LASEDRLMGQKSCC
Trigger: GCAGCAGCTCTTTTGACCCATCAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS-3UTR CAA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAGACTGGGTGGGACCATaGAGACAGGGGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGDWVGP*RQGQAA
Trigger: GGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTC...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGAAATCCTGCTCCAGGTaGCCCAACGGACGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: QNSCVILRPRATSRKALKKSCSR*PNGRGP
Trigger: GGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATTT...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS TCA 90 bp ACTACAGGTGCTGCTGCCCCCGCAGCTGCTCCAGAGAAGTCGGGCTaGAGATCAAGGAGATCGCTTGATGGCTTAGCAGAGCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: TTGAAAPAAAPEKSG*RSRRSLDGLAELTG
Trigger: CCCAGTCAGCTCTGCTAAGCCATCAAGCGATCTCCTTGATCTTCAGCCCGACTTCTCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 90 bp GAACAGTGCCTTGCGGGGGAACACCCGCTGACCATGTGGCTGGAGTaGCTTTCGGTTGCCAGTTGGCTCCACCAGTCAGCTTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: EQCLAGEHPLTMWLE*LSVASWLHQSAFSP
Trigger: GGGAGAAAAAGCTGACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCAGCCACATGGTCAGCGGGTGTTCCCCCGCAAGGCACTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS GCA 90 bp CTTCTTCTTGGGGCCCATCACCTCATGAGTGGTGGCTTTGCAGACTaGTCTTGCTACAGCAGAGCCAGTCACGCTGTACTGAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: LLLGAHHLMSGGFAD*SCYSRASHAVLSGG
Trigger: GCCGCCGCTCAGTACAGCGTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAGAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 90 bp CCCAAATCCCCCAAAAAGGTCTATGACACCCGAGGACTCCGCCTTTaGAGGAGAGGCAGTGGATGCAGGAGACGGCGCTGCAAATGCGTC +
Preference number: 5 (lower is better)
Translates to: PKSPKKVYDTRGLRL*RRGSGCRRRRCKCV
Trigger: GACGCATTTGCAGCGCCGTCTCCTGCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGGGATTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000098495.10
CDS CCA 90 bp CTAAACTGGCCAGAGACGAGTCAAGGTCACTTCCGAGGCCTTTGCTaGCTGCCATTGCAGGACTGGGTGGGACCATTGAGACAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LNWPETSQGHFRGLC*LPLQDWVGPLRQGQ
Trigger: CTGCCCCTGTCTCAATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTGACCTTGACTCGTCTCTGGCCAGTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGCCACCCAGCTACTGTTaGTCGCCCGCTCAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWPPSYC*SPAQRG
Trigger: CCCTCTTTGAGCGGGCGACAAACAGTAGCTGGGTGG...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGCAGGAGAAGGAGCAGTaGCGGGAACTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QNSCVILRPRATSRKALKQEKEQ*RELEGL
Trigger: CAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCTG...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGCCGAGGACTCCGCCTTaGCAGGAGAGGCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: QNSCVILRPRATSRKALKPRTPP*QERQWM
Trigger: CATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGG...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp AAACGCATCCCCAAAAAGGTCTATGACACCCGAGGACTCCGCCTTTaGAGGAGAGGCAGTGGATGCAGGAGACGGCGCTGCAAATGCGTC +
Preference number: 5 (lower is better)
Translates to: KRIPKKVYDTRGLRL*RRGSGCRRRRCKCV
Trigger: GACGCATTTGCAGCGCCGTCTCCTGCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGGATGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000239074.2
CDS GCA 90 bp CTACTAAACTGGCCAGAGACGAGTCAAGGTCACTTCCGAGGCCTTTaGTGGCTGCCATTGCAGGACTGGGTGGGACCATTGAGACAGGGG +
Preference number: 5 (lower is better)
Translates to: LLNWPETSQGHFRGL*WLPLQDWVGPLRQG
Trigger: CCCCTGTCTCAATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTGACCTTGACTCGTCTCTGGCCAGTTTAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTCTTTGCTGGCTGCCATaGCAGGACTGGGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTLCWLP*QDWVGP
Trigger: TGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAG...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGACTTTGCTGGCTGCCATaGCAGGACTGGGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGLCWLP*QDWVGP
Trigger: TGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAG...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 90 bp TTAAGATCCGCTAACGGGTCCTTGGCTGGAGGTTTCTTGGGACTCTaGGTGGCAGGTGTAGGGCTTGGAGAAAGCTGTGTGCCGGGCACA +
Preference number: 5 (lower is better)
Translates to: LRSANGSLAGGFLGL*VAGVGLGESCVPGT
Trigger: TGTGCCCGGCACACAGCTTTCTCCAAGCCCTACACCTGCCACTCAGAGTCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGGATCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp AGCGCTGGTCTCAGGTGGCTTCATTGCAAAGAGGTCCAGCTCAGGTaGAGCCTCTGCGCTACCTTCAGATGGGGCAAAAGGGTCATTTCC +
Preference number: 5 (lower is better)
Translates to: SAGLRWLHCKEVQLR*SLCATFRWGKRVIS
Trigger: GGAAATGACCCTTTTGCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAGACCAGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 90 bp TGGGTGGGACCATTGAGACAGGGGCAGGCTGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGCCTAAACCATCAAACACTGATGGGT +
Preference number: 5 (lower is better)
Translates to: WVGPLRQGQAARMVP*LASEDRLNHQTLMG
Trigger: ACCCATCAGTGTTTGATGGTTTAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCATCTGCCCCTGCAGGATaGGCATACTCTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: CSLPQLGCVLGRGSYASASAPAG*AYSSGA
Trigger: AGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGA...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGGACTGGGTGGGACCATaGAGACAGGGGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KEYTFLMFTATAGLCAWEDWVGP*RQGQAA
Trigger: GGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTC...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGAGTGACTTTCGGTaGCCAGTTGGCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWWSDFR*PVGSTS
Trigger: ACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCA...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTTCCGCTAACGGGTCCTaGGCTGGAGGTTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTSANGS*AGGFLG
Trigger: TCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGGA...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGTCTGCCCCTGCAGGATaGGCATACTCTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: QNSCVILRPRATSRKALKSAPAG*AYSSGA
Trigger: AGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGA...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCATCTCAGGTGGCTTCATaGCAAAGAGGTCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: CSLPQLGCVLGRGSYASASQVAS*QRGPAQ
Trigger: CTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAGA...TGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCTGGAGTGACTTTCGGTaGCCAGTTGGCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: LMFTATAGLCAWERKLRVWSDFR*PVGSTS
Trigger: ACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCA...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACGGATGGTGCCATGGTaGGCATCAGAAGATCGCCTA +
Preference number: 5 (lower is better)
Translates to: CAWERKLRVSTGFGTGGSRMVPW*ASEDRL
Trigger: TAGGCGATCTTCTGATGCCAACCATGGCACCATCCG...TGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCAAAATCCTGCTCCAGGTaGCCCAACGGACGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PRATSRKALKALEPFIHSKSCSR*PNGRGP
Trigger: GGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATTT...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCCTTTGCAGACTGCTCTaGCTACAGCAGAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: LMFTATAGLCAWERKLRVLCRLL*LQQSQS
Trigger: TGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAG...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTCTTTGCAGACTGCTCTaGCTACAGCAGAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTLCRLL*LQQSQS
Trigger: TGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAG...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGTCTCAGGTGGCTTCATaGCAAAGAGGTCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: QNSCVILRPRATSRKALKSQVAS*QRGPAQ
Trigger: CTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAGA...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCAGGAGAAGGAGCAGTaGCGGGAACTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGQEKEQ*RELEGL
Trigger: CAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCTG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTC +
Preference number: 5 (lower is better)
Translates to: CVLGRGSYASALGLVLVAQKSCC*KSKASF
Trigger: GAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTG...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTC +
Preference number: 5 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTQKSCC*KSKASF
Trigger: GAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTG...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACCTTTGCTGGCTGCCATaGCAGGACTGGGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: RPRATSRKALKALEPFIHLCWLP*QDWVGP
Trigger: TGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAG...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp ACAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAATGGAGTGACTTTCGGTaGCCAGTTGGCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: TEQLRHPPSTGNVQKSTKWSDFR*PVGSTS
Trigger: ACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCA...TTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 90 bp GTCGTTCCAAAAGCTGCCTCGAAACTGGGTTGCAGCAGGTTATTCTaGGCTGGAGTCACTGGCGTTGTAGAAGGGGCCATGAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: VVPKAASKLGCSRLF*AGVTGVVEGAMKEP
Trigger: GGGTTCTTTCATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTTTTGGAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp CCATGGTTGGCATCAGAAGATCGCCTGATGGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCTCGAAACTGG +
Preference number: 5 (lower is better)
Translates to: PWLASEDRLMGQKSC*LKSKASFQKLPRNW
Trigger: CCAGTTTCGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGGCGATCTTCTGATGCCAACCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS-3UTR CAA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCACTTTGCTGGCTGCCATaGCAGGACTGGGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: PRATSRKALKALEPFIHSLCWLP*QDWVGP
Trigger: TGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAG...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGCCAGAAATCCCAAGATaGCCTACTAAACTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWPEIPR*PTKLAR
Trigger: TCTGGCCAGTTTAGTAGGCAATCTTGGGATTTCTGG...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGTCTGCCCCTGCAGGATaGGCATACTCTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: KEYTFLMFTATAGLCAWESAPAG*AYSSGA
Trigger: AGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGA...CTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGCACCAGATGCTTGGTaGTTTCCAGGTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LMFTATAGLCAWERKLRVAPDAW*FPGFFP
Trigger: AGGAAAGAAACCTGGAAACAACCAAGCATCTGGTGC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
CDS-3UTR CAA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCGGATGGTGCCATGGTaGGCATCAGAAGATCGCCTG +
Preference number: 5 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGRMVPW*ASEDRL
Trigger: CAGGCGATCTTCTGATGCCAACCATGGCACCATCCG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS-3UTR CAA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGACTGGGTGGGACCATaGAGACAGGGGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKDWVGP*RQGQAA
Trigger: GGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCCAGAAATCCCAAGATaGCCTACTAAACTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: CVLGRGSYASALGLVLVAPEIPR*PTKLAR
Trigger: TCTGGCCAGTTTAGTAGGCAATCTTGGGATTTCTGG...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTGAGGGAGCACCAGATTaGTTTCCAGGTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTEGAPD*FPGFFP
Trigger: AGGAAAGAAACCTGGAAACAAATCTGGTGCTCCCTC...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 90 bp ATGCACATCAAACTCCAGCAGTGCATCGATCTGCCCCTGCAGGATTaGCATACTCTTCAGGAGCTTTTCAGGAACCATCGTCCTCATGAC +
Preference number: 5 (lower is better)
Translates to: MHIKLQQCIDLPLQD*HTLQELFRNHRPHD
Trigger: GTCATGAGGACGATGGTTCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGCACTGCTGGAGTTTGATGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS CCA 90 bp GGAGAAAGCATCTGTGCCAAACAGGTCTATGCTAGGAGCCGCGTCTaGCTTAGGTGCTGCAGCAACTTCAGGAGCAGAATCAAACAAATC +
Preference number: 5 (lower is better)
Translates to: GESICAKQVYARSRV*LRCCSNFRSRIKQI
Trigger: GATTTGTTTGATTCTGCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGCATAGACCTGTTTGGCACAGATGCTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAACCGAGGACTCCGCCTTaGCAGGAGAGGCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKPRTPP*QERQWM
Trigger: CATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGG...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTGCCTCGAAACTGGGTaGCAGCAGGTTATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RPRATSRKALKALEPFIHCLETG*QQVILS
Trigger: GCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCA...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTC +
Preference number: 5 (lower is better)
Translates to: RPRATSRKALKALEPFIHQKSCC*KSKASF
Trigger: GAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTG...GTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CTAATGTTCACTGCCACAGCTGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCGGAGATCTCCCTTTTTaGATGTGGTACCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: LMFTATAGLCAWERKLRVGDLPF*MWYQKS
Trigger: GGATTTCTGGTACCACATCAAAAAAGGGAGATCTCC...GACGCGTAACTTCCTCTCCCAAGCACACAGCCCAGCTGTGGCAGTGAACATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp TCATTTGGATGCACATCAAACTCCAGCAGTGCATCGATCTGCCCCTaGAGGATTGGCATACTCTTCAGGAGCTTTTCAGGAACCATCGTC +
Preference number: 5 (lower is better)
Translates to: SFGCTSNSSSASICP*RIGILFRSFSGTIV
Trigger: GACGATGGTTCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGCACTGCTGGAGTTTGATGTGCATCCAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 90 bp GAAGATCGCCTAAACCATCAAACACTGATGGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCTCGAAACTGG +
Preference number: 5 (lower is better)
Translates to: EDRLNHQTLMGQKSC*LKSKASFQKLPRNW
Trigger: CCAGTTTCGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGTGTTTGATGGTTTAGGCGATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGGGCTGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGAGAAAGTTGCTGAGATaGAATAGCGTATTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: WAVCLGEEVTRQHWVWYWRKLLR*NSVFLE
Trigger: CTCTAGGAATACGCTATTCAATCTCAGCAACTTTCT...CCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAACCATTCATTCACTCATGCCTCGAAACTGGGTaGCAGCAGGTTATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: PRATSRKALKALEPFIHSCLETG*QQVILS
Trigger: GCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCA...TGAGTGAATGAATGGTTCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGTGCCTCGAAACTGGGTaGCAGCAGGTTATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGCLETG*QQVILS
Trigger: GCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCA...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTC +
Preference number: 5 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGQKSCC*KSKASF
Trigger: GAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGGACTGGGTGGGACCATaGAGACAGGGGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKDWVGP*RQGQAA
Trigger: GGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTC...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp GTTAGTTCATTTGGATGCACATCAAACTCCAGCAGTGCATCGATCTaGCCCTGCAGGATTGGCATACTCTTCAGGAGCTTTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: VSSFGCTSNSSSASI*PCRIGILFRSFSGT
Trigger: GGTTCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGCACTGCTGGAGTTTGATGTGCATCCAAATGAACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 90 bp TGTGCCAAACAGGTCTATGCTAGGAGCCGCGTCTGGCTTAGGTGCTaGAGCAACTTCAGGAGCAGAATCAAACAAATCACCAAAGATATC +
Preference number: 5 (lower is better)
Translates to: CAKQVYARSRVWLRC*SNFRSRIKQITKDI
Trigger: GATATCTTTGGTGATTTGTTTGATTCTGCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGCATAGACCTGTTTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 90 bp ATCTGTGCCAAACAGGTCTATGCTAGGAGCCGCGTCTGGCTTAGGTaGTGCAGCAACTTCAGGAGCAGAATCAAACAAATCACCAAAGAT +
Preference number: 5 (lower is better)
Translates to: ICAKQVYARSRVWLR*CSNFRSRIKQITKD
Trigger: ATCTTTGGTGATTTGTTTGATTCTGCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGCATAGACCTGTTTGGCACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGTGTGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTAGAAAGTTGCTGAGATaGAATAGCGTATTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: CVLGRGSYASALGLVLVARKLLR*NSVFLE
Trigger: CTCTAGGAATACGCTATTCAATCTCAGCAACTTTCT...AGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGGCATTGGAAGAAAGTTGCTGAGATaGAATAGCGTATTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: LRHPPSTGNVQKSTKGIGRKLLR*NSVFLE
Trigger: CTCTAGGAATACGCTATTCAATCTCAGCAACTTTCT...TCCAATGCCTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAGAACAGCTGCGTCATCCTCCGTCCACGGGCAACGTCCAGAAAAGCACTAAAGCATTGGTTAGTTCATTaGGATGCACATCAAACTCCA +
Preference number: 5 (lower is better)
Translates to: QNSCVILRPRATSRKALKHWLVH*DAHQTP
Trigger: TGGAGTTTGATGTGCATCCAAATGAACTAACCAATG...CTTTAGTGCTTTTCTGGACGTTGCCCGTGGACGGAGGATGACGCAGCTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TGCTTGGGAGAGGAAGTTACGCGTCAGCACTGGGTTTGGTACTGGTGGCTCACTGCATTTATGACACCATaGGTTAGTTCATTTGGATGC +
Preference number: 5 (lower is better)
Translates to: CLGEEVTRQHWVWYWWLTAFMTP*VSSFGC
Trigger: GCATCCAAATGAACTAACCAATGGTGTCATAAATGC...AGTGAGCCACCAGTACCAAACCCAGTGCTGACGCGTAACTTCCTCTCCCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAATCCGCTAACGGGTCCTaGGCTGGAGGTTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKSANGS*AGGFLG
Trigger: TCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGGA...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAATCCTGCTCCAGGTaGCCCAACGGACGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSKSCSR*PNGRGP
Trigger: GGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATTT...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGCAGGAGAAGGAGCAGTaGCGGGAACTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSQEKEQ*RELEGL
Trigger: CAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCTG...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTCCGAGGACTCCGCCTTaGCAGGAGAGGCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVPRTPP*QERQWM
Trigger: CATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGG...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AGCAGGGTAACAGCTAAAGAGTACACATTCCTAATGTTCACTGCCACAGCTGGGCCAGAAATCCCAAGATaGCCTACTAAACTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: SRVTAKEYTFLMFTATAGPEIPR*PTKLAR
Trigger: TCTGGCCAGTTTAGTAGGCAATCTTGGGATTTCTGG...CCCAGCTGTGGCAGTGAACATTAGGAATGTGTACTCTTTAGCTGTTACCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCAGAGGGACTGAGCTGGTaGGTGGAACAGTGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPEGLSW*VEQCLA
Trigger: CGCAAGGCACTGTTCCACCAACCAGCTCAGTCCCTC...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAACTTTGCAGACTGCTCTaGCTACAGCAGAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKLCRLL*LQQSQS
Trigger: TGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAG...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAATCTGCCCCTGCAGGATaGGCATACTCTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKSAPAG*AYSSGA
Trigger: AGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGA...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAATCTCAGGTGGCTTCATaGCAAAGAGGTCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKSQVAS*QRGPAQ
Trigger: CTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAGA...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCAGGAGAAGGAGCAGTaGCGGGAACTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNQEKEQ*RELEGL
Trigger: CAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCTG...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTCCGAGGACTCCGCCTTaGCAGGAGAGGCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFPRTPP*QERQWM
Trigger: CATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGG...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAATGCCTCGAAACTGGGTaGCAGCAGGTTATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKCLETG*QQVILS
Trigger: GCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCA...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGTCCGCTAACGGGTCCTaGGCTGGAGGTTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKSANGS*AGGFLG
Trigger: TCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGGA...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGGAGGGACTGAGCTGGTaGGTGGAACAGTGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSEGLSW*VEQCLA
Trigger: CGCAAGGCACTGTTCCACCAACCAGCTCAGTCCCTC...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS GCA 90 bp CCTCATGACACCGTCAGCCCCTTTCTTCACTCTGGCAAAGTCAAATaGCATCTGTCTGTAGGAGAAAGCCTTTTCATTCAAGTATCTACT +
Preference number: 5 (lower is better)
Translates to: PHDTVSPFLHSGKVK*HLSVGESLFIQVST
Trigger: AGTAGATACTTGAATGAAAAGGCTTTCTCCTACAGACAGATGGCATTTGACTTTGCCAGAGTGAAGAAAGGGGCTGACGGTGTCATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACTTTGCTGGCTGCCATaGCAGGACTGGGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSLCWLP*QDWVGP
Trigger: TGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAG...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCATGGAGTGACTTTCGGTaGCCAGTTGGCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPWSDFR*PVGSTS
Trigger: ACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCA...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCACGGATGGTGCCATGGTaGGCATCAGAAGATCGCCTA +
Preference number: 5 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPRMVPW*ASEDRL
Trigger: TAGGCGATCTTCTGATGCCAACCATGGCACCATCCG...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGGAGGGACTGAGCTGGTaGGTGGAACAGTGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQEGLSW*VEQCLA
Trigger: CGCAAGGCACTGTTCCACCAACCAGCTCAGTCCCTC...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AAAGGCATTGGAACCATTCATTCACTCATGGTTTACTTCGTACAACACACAAAGCTTTGCAGACTGCTCTaGCTACAGCAGAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: KGIGTIHSLMVYFVQHTKLCRLL*LQQSQS
Trigger: TGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAG...CTTTGTGTGTTGTACGAAGTAAACCATGAGTGAATGAATGGTTCCAATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTGGAGTGACTTTCGGTaGCCAGTTGGCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVWSDFR*PVGSTS
Trigger: ACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCA...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCTCCGCTAACGGGTCCTaGGCTGGAGGTTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSSANGS*AGGFLG
Trigger: TCCCAAGAAACCTCCAGCCAAGGACCCGTTAGCGGA...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CATCAAAATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAGAGGGAGCACCAGATTaGTTTCCAGGTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: HQNLQPSHRHRQYDNKLKEGAPD*FPGFFP
Trigger: AGGAAAGAAACCTGGAAACAAATCTGGTGCTCCCTC...TTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 90 bp TGTTGCAAATATGTCAACTGGCGGGGATGTGTCGATAGTTTTAGCTaGTGTAGAATTAGGAGATGTAACAGTTGTGGCTGGAGAAGACTT +
Preference number: 5 (lower is better)
Translates to: CCKYVNWRGCVDSFS*CRIRRCNSCGWRRL
Trigger: AAGTCTTCTCCAGCCACAACTGTTACATCTCCTAATTCTACACCAGCTAAAACTATCGACACATCCCCGCCAGTTGACATATTTGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACTCTGCCCCTGCAGGATaGGCATACTCTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNSAPAG*AYSSGA
Trigger: AGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGA...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTCGGATGGTGCCATGGTaGGCATCAGAAGATCGCCTA +
Preference number: 5 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFRMVPW*ASEDRL
Trigger: TAGGCGATCTTCTGATGCCAACCATGGCACCATCCG...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCATCTCAGGTGGCTTCATaGCAAAGAGGTCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSSQVAS*QRGPAQ
Trigger: CTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAGA...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCATGCCTCGAAACTGGGTaGCAGCAGGTTATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSCLETG*QQVILS
Trigger: GCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCA...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGCCAGAAATCCCAAGATaGCCTACTAAACTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSPEIPR*PTKLAR
Trigger: TCTGGCCAGTTTAGTAGGCAATCTTGGGATTTCTGG...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCAGGAGATCTCCCTTTTTaGATGTGGTACCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPGDLPF*MWYQKS
Trigger: GGATTTCTGGTACCACATCAAAAAAGGGAGATCTCC...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AATCTTCAGCCAAGCCATCGGCACAGACAGTATGACAACAAACTGAAAATCAAACATTGGTTAGTTCATTaGGATGCACATCAAACTCCA +
Preference number: 5 (lower is better)
Translates to: NLQPSHRHRQYDNKLKIKHWLVH*DAHQTP
Trigger: TGGAGTTTGATGTGCATCCAAATGAACTAACCAATG...TTTGATTTTCAGTTTGTTGTCATACTGTCTGTGCCGATGGCTTGGCTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGCACCAGATGCTTGGTaGTTTCCAGGTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSAPDAW*FPGFFP
Trigger: AGGAAAGAAACCTGGAAACAACCAAGCATCTGGTGC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
CDS-3UTR CAA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCCAGAAATCCCAAGATaGCCTACTAAACTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSPEIPR*PTKLAR
Trigger: TCTGGCCAGTTTAGTAGGCAATCTTGGGATTTCTGG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp CAACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTGGAGATCTCCCTTTTTaGATGTGGTACCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: QQVGSFCDWKNVLHTEKVGDLPF*MWYQKS
Trigger: GGATTTCTGGTACCACATCAAAAAAGGGAGATCTCC...AACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCAGAGGGAGCACCAGATTaGTTTCCAGGTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: YIYIETFRKHRHIFPNGSEGAPD*FPGFFP
Trigger: AGGAAAGAAACCTGGAAACAAATCTGGTGCTCCCTC...TGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCACATTGGTTAGTTCATTaGGATGCACATCAAACTCCA +
Preference number: 5 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPHWLVH*DAHQTP
Trigger: TGGAGTTTGATGTGCATCCAAATGAACTAACCAATG...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp ATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCAAATGGCTCACCAGCATTTATGACACCATaGGTTAGTTCATTTGGATGC +
Preference number: 5 (lower is better)
Translates to: IYIETFRKHRHIFPNGSPAFMTP*VSSFGC
Trigger: GCATCCAAATGAACTAACCAATGGTGTCATAAATGC...TGGTGAGCCATTTGGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AACAAGTTGGAAGTTTCTGTGATTGGAAAAATGTACTCCACACCGAAAAAGTTTGGAGATCTCCCTTTTTaGATGTGGTACCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: NKLEVSVIGKMYSTPKKFGDLPF*MWYQKS
Trigger: GGATTTCTGGTACCACATCAAAAAAGGGAGATCTCC...AAACTTTTTCGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp AGAAAGTTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACGGAGATCTCCCTTTTTaGATGTGGTACCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: RKFMGGLEFVQKLYIHRNGDLPF*MWYQKS
Trigger: GGATTTCTGGTACCACATCAAAAAAGGGAGATCTCC...GTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAACTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp TTCATGGGAGGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGGCATTTATGACACCATaGGTTAGTTCATTTGGATGC +
Preference number: 5 (lower is better)
Translates to: FMGGLEFVQKLYIHRNLSAFMTP*VSSFGC
Trigger: GCATCCAAATGAACTAACCAATGGTGTCATAAATGC...CGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCCTCCCATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp GTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGACACATCTTTCCCATTGGTTAGTTCATTaGGATGCACATCAAACTCCA +
Preference number: 5 (lower is better)
Translates to: VQKLYIHRNLSKTQTHLSHWLVH*DAHQTP
Trigger: TGGAGTTTGATGTGCATCCAAATGAACTAACCAATG...GGAAAGATGTGTCTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS-3UTR CAA 90 bp GGACTTGAGTTTGTCCAAAAGTTATATATACATCGAAACCTTTCGAAAACACAGGCATTTATGACACCATaGGTTAGTTCATTTGGATGC +
Preference number: 5 (lower is better)
Translates to: GLEFVQKLYIHRNLSKTQAFMTP*VSSFGC
Trigger: GCATCCAAATGAACTAACCAATGGTGTCATAAATGC...CTGTGTTTTCGAAAGGTTTCGATGTATATATAACTTTTGGACAAACTCAAGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp CCAGGCGGTCGCACCCCCAGAAGGAGGCACTACAGGTaGTGCTGCCCCCGCAGCTGCTCCAGAGAAGTCGGG +
Preference number: 6 (lower is better)
Translates to: PGGRTPRRRHYR*CCPRSCSREVG
Trigger: CCCGACTTCTCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCTCCTTCTGGGGGTGCGACCGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp CGGCACCCGGAGGGACTGAGCTGGTTGGTGGAACAGTaGCTTGCGGGGGAACACCCGCTGACCATGTGGCTG +
Preference number: 6 (lower is better)
Translates to: RHPEGLSWLVEQ*LAGEHPLTMWL
Trigger: CAGCCACATGGTCAGCGGGTGTTCCCCCGCAAGGCACTGTTCCACCAACCAGCTCAGTCCCTCCGGGTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS GCA 72 bp GTCCCTGAAGGAGGCATTCCAAATCCTGCTCCAGGTTaGCCAACGGACGGGGCCCCGGCACCCGGAGGGACT +
Preference number: 6 (lower is better)
Translates to: VPEGGIPNPAPG*PTDGAPAPGGT
Trigger: AGTCCCTCCGGGTGCCGGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATTTGGAATGCCTCCTTCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS CAA 90 bp CCAGAGACGAGTCAAGGTCACTTCCGAGGCCTTTGCTGGCTGCCATaGCAGGACTGGGTGGGACCATTGAGACAGGGGCAGGCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: PETSQGHFRGLCWLP*QDWVGPLRQGQAAR
Trigger: CCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTGACCTTGACTCGTCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp ACTGCTCTTGCTACAGCAGAGCCAGTCACGCTGTACTaGGCGGCGGCGATCCGATCCGTGAGCGTTTGGCCC +
Preference number: 6 (lower is better)
Translates to: TALATAEPVTLY*AAAIRSVSVWP
Trigger: GGGCCAAACGCTCACGGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGGCTCTGCTGTAGCAAGAGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS TCA 72 bp GAGGCGGGGGAACACCCGCTGACCATGTGGCTGGAGTaGCTTTCGGTTGCCAGTTGGCTCCACCAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: EAGEHPLTMWLE*LSVASWLHQSA
Trigger: AGCTGACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCAGCCACATGGTCAGCGGGTGTTCCCCCGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036347.13
ENSMUST00000098495.10
CDS GCA 72 bp GCAGGACTGGGTGGGACCATTGAGACAGGGGCAGGCTaGCCGGATGGTGCCATGGTTGGCATCAGAAGATCG +
Preference number: 6 (lower is better)
Translates to: AGLGGTIETGAG*PDGAMVGIRRS
Trigger: CGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp CTTGCGGGGGAACACCCGCTGACCATGTGGCTGGAGTaGCTTTCGGTTGCCAGTTGGCTCCACCAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LAGEHPLTMWLE*LSVASWLHQSA
Trigger: AGCTGACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCAGCCACATGGTCAGCGGGTGTTCCCCCGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000239074.2
CDS GCA 72 bp TGTAGGGCTTGGAGAAAGCTGTGTGCCGGGCACAGCTaGAGCTCCAAAGGGTGGCCTCATCATGGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: CRAWRKLCAGHS*SSKGWPHHGLC
Trigger: GCACAGCCCATGATGAGGCCACCCTTTGGAGCTGCAGCTGTGCCCGGCACACAGCTTTCTCCAAGCCCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 90 bp TCTTGGGGCCCATCACCTCATGAGTGGTGGCTTTGCAGACTGCTCTaGCTACAGCAGAGCCAGTCACGCTGTACTGAGCGGCGGCGATCC +
Preference number: 6 (lower is better)
Translates to: SWGPSPHEWWLCRLL*LQQSQSRCTERRRS
Trigger: GGATCGCCGCCGCTCAGTACAGCGTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS TCA 72 bp GCGCTGCAAATGCGTCCACAGATAAGAGGTCAGCAGTaGGAGAACTCTCAGGCACCGGAGAGGCCCCTCGTG +
Preference number: 6 (lower is better)
Translates to: ALQMRPQIRGQQ*ENSQAPERPLV
Trigger: CACGAGGGGCCTCTCCGGTGCCTGAGAGTTCTCTCACTGCTGACCTCTTATCTGTGGACGCATTTGCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 72 bp AGTCAAGGTCACTTCCGAGGCCTTTGCTGGCTGCCATaGCAGGACTGGGTGGGACCATTGAGACAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SQGHFRGLCWLP*QDWVGPLRQGQ
Trigger: CTGCCCCTGTCTCAATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTGACCTTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp TCCAGAGAAGTCGGGCTGAAGATCAAGGAGATCGCTTaGTGGCTTAGCAGAGCTGACTGGGGCAGCCGCGGA +
Preference number: 6 (lower is better)
Translates to: SREVGLKIKEIA*WLSRADWGSRG
Trigger: TCCGCGGCTGCCCCAGTCAGCTCTGCTAAGCCATCAAGCGATCTCCTTGATCTTCAGCCCGACTTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp GGGGCCCATCACCTCATGAGTGGTGGCTTTGCAGACTaGTCTTGCTACAGCAGAGCCAGTCACGCTGTACTG +
Preference number: 6 (lower is better)
Translates to: GAHHLMSGGFAD*SCYSRASHAVL
Trigger: CAGTACAGCGTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS CCA 72 bp CCATTGAGACAGGGGCAGGCTGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGCCTGATGGGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: PLRQGQAARMVP*LASEDRLMGQK
Trigger: CTTTTGACCCATCAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS CCA 72 bp CCAGAGACGAGTCAAGGTCACTTCCGAGGCCTTTGCTaGCTGCCATTGCAGGACTGGGTGGGACCATTGAGA +
Preference number: 6 (lower is better)
Translates to: PETSQGHFRGLC*LPLQDWVGPLR
Trigger: TCTCAATGGTCCCACCCAGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTGACCTTGACTCGTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 72 bp TTGAGACAGGGGCAGGCTGCCCGGATGGTGCCATGGTaGGCATCAGAAGATCGCCTGATGGGTCAAAAGAGC +
Preference number: 6 (lower is better)
Translates to: LRQGQAARMVPW*ASEDRLMGQKS
Trigger: GCTCTTTTGACCCATCAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS CAA 90 bp GGAACACCCGCTGACCATGTGGCTGGAGTGACTTTCGGTTGCCAGTaGGCTCCACCAGTCAGCTTTTTCTCCCCAGCATTCCACTGGAGA +
Preference number: 6 (lower is better)
Translates to: GTPADHVAGVTFGCQ*APPVSFFSPAFHWR
Trigger: TCTCCAGTGGAATGCTGGGGAGAAAAAGCTGACTGGTGGAGCCAACTGGCAACCGAAAGTCACTCCAGCCACATGGTCAGCGGGTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp GCTAACGGGTCCTTGGCTGGAGGTTTCTTGGGACTCTaGGTGGCAGGTGTAGGGCTTGGAGAAAGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: ANGSLAGGFLGL*VAGVGLGESCV
Trigger: CACACAGCTTTCTCCAAGCCCTACACCTGCCACTCAGAGTCCCAAGAAACCTCCAGCCAAGGACCCGTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp TCTTCTTGGGGCCCATCACCTCATGAGTGGTGGCTTTaGAGACTGCTCTTGCTACAGCAGAGCCAGTCACGC +
Preference number: 6 (lower is better)
Translates to: SSWGPSPHEWWL*RLLLLQQSQSR
Trigger: GCGTGACTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 72 bp CTCAGGTGGCTTCATTGCAAAGAGGTCCAGCTCAGGTaGAGCCTCTGCGCTACCTTCAGATGGGGCAAAAGG +
Preference number: 6 (lower is better)
Translates to: LRWLHCKEVQLR*SLCATFRWGKR
Trigger: CCTTTTGCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 72 bp GGTGCTTCTTCTTGGGGCCCATCACCTCATGAGTGGTaGCTTTGCAGACTGCTCTTGCTACAGCAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GASSWGPSPHEW*LCRLLLLQQSQ
Trigger: CTGGCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAGAAGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS CCA 72 bp CCAGGTGCTTCTTCTTGGGGCCCATCACCTCATGAGTaGTGGCTTTGCAGACTGCTCTTGCTACAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: PGASSWGPSPHE*WLCRLLLLQQS
Trigger: GCTCTGCTGTAGCAAGAGCAGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAGAAGAAGCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS CCA 72 bp AGCTGTAGGGGTAACTACAGGAGCGCTGGTCTCAGGTaGCTTCATTGCAAAGAGGTCCAGCTCAGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SCRGNYRSAGLR*LHCKEVQLRCS
Trigger: GCTGCACCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAGACCAGCGCTCCTGTAGTTACCCCTACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 90 bp GTGGGACCATTGAGACAGGGGCAGGCTGCCCGGATGGTGCCATGGTaGGCATCAGAAGATCGCCTAAACCATCAAACACTGATGGGTCAA +
Preference number: 6 (lower is better)
Translates to: VGPLRQGQAARMVPW*ASEDRLNHQTLMGQ
Trigger: TTGACCCATCAGTGTTTGATGGTTTAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp CTCCAAAGGGTGGCCTCATCATGGGCTGTGCAAACATaGCTGGCTGCTGAGACATCATGGTCATGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: LQRVASSWAVQT*LAAETSWSCLS
Trigger: GGACAGGCATGACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCATGATGAGGCCACCCTTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 72 bp CCATTGAGACAGGGGCAGGCTGCCCGGATGGTGCCATaGTTGGCATCAGAAGATCGCCTAAACCATCAAACA +
Preference number: 6 (lower is better)
Translates to: PLRQGQAARMVP*LASEDRLNHQT
Trigger: TGTTTGATGGTTTAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 72 bp CGAAGGCGTCGTTCCAAAAGCTGCCTCGAAACTGGGTaGCAGCAGGTTATTCTGAGCTGGAGTCACTGGCGT +
Preference number: 6 (lower is better)
Translates to: RRRRSKSCLETG*QQVILSWSHWR
Trigger: ACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTTTTGGAACGACGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 72 bp TTGAGACAGGGGCAGGCTGCCCGGATGGTGCCATGGTaGGCATCAGAAGATCGCCTAAACCATCAAACACTG +
Preference number: 6 (lower is better)
Translates to: LRQGQAARMVPW*ASEDRLNHQTL
Trigger: CAGTGTTTGATGGTTTAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp CTGTTTGTCGCCCGCTCAAAGAGGGTGTCGGCCATCTaGGGGATATTGACATTGGTCTCATTGGTAGCCTGG +
Preference number: 6 (lower is better)
Translates to: LFVARSKRVSAI*GILTLVSLVAW
Trigger: CCAGGCTACCAATGAGACCAATGTCAATATCCCTCAGATGGCCGACACCCTCTTTGAGCGGGCGACAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 72 bp AGCTGCAGCTCCAAAGGGTGGCCTCATCATGGGCTGTaGAAACATGACTGGCTGCTGAGACATCATGGTCAT +
Preference number: 6 (lower is better)
Translates to: SCSSKGWPHHGL*KHDWLLRHHGH
Trigger: ATGACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCATGATGAGGCCACCCTTTGGAGCTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp TGTAGTAGGAGGGGAAGGCTCTGGTGCAAATGGGTCTaGAATCGGTGCTTCACAGGGAACAGAGGAAAGTGC +
Preference number: 6 (lower is better)
Translates to: CSRRGRLWCKWV*NRCFTGNRGKC
Trigger: GCACTTTCCTCTGTTCCCTGTGAAGCACCGATTTCAGACCCATTTGCACCAGAGCCTTCCCCTCCTACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp GCATCAGAAGATCGCCTGATGGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: ASEDRLMGQKSC*LKSKASFQKLP
Trigger: AGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGGCGATCTTCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS CCA 72 bp TGCCTCGAAACTGGGTTGCAGCAGGTTATTCTGAGCTaGAGTCACTGGCGTTGTAGAAGGGGCCATGAAAGA +
Preference number: 6 (lower is better)
Translates to: CLETGLQQVILS*SHWRCRRGHER
Trigger: TCTTTCATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 72 bp AAGTCGAAGGCGTCGTTCCAAAAGCTGCCTCGAAACTaGGTTGCAGCAGGTTATTCTGAGCTGGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: KSKASFQKLPRN*VAAGYSELESL
Trigger: CAGTGACTCCAGCTCAGAATAACCTGCTGCAACCCAGTTTCGAGGCAGCTTTTGGAACGACGCCTTCGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 72 bp CAAACTCCAGCAGTGCATCGATCTGCCCCTGCAGGATaGGCATACTCTTCAGGAGCTTTTCAGGAACCATCG +
Preference number: 6 (lower is better)
Translates to: QTPAVHRSAPAG*AYSSGAFQEPS
Trigger: CGATGGTTCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGCACTGCTGGAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS CAA 72 bp TCAGAAGATCGCCTGATGGGTCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCTCGA +
Preference number: 6 (lower is better)
Translates to: SEDRLMGQKSCC*KSKASFQKLPR
Trigger: TCGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGGCGATCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS CAA 90 bp TGGTTGGCATCAGAAGATCGCCTGATGGGTCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCTCGAAACTGGGTT +
Preference number: 6 (lower is better)
Translates to: WLASEDRLMGQKSCC*KSKASFQKLPRNWV
Trigger: AACCCAGTTTCGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGGCGATCTTCTGATGCCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036347.13
CDS GCA 72 bp TGCACATCAAACTCCAGCAGTGCATCGATCTGCCCCTaGAGGATTGGCATACTCTTCAGGAGCTTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: CTSNSSSASICP*RIGILFRSFSG
Trigger: TCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGCACTGCTGGAGTTTGATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 72 bp GTGAGGTCGGGAATGTCACCTTTATCAATACCAACTTaGTCGGCGACCTTGAGGAATTCAGACACCCTCGTC +
Preference number: 6 (lower is better)
Translates to: VRSGMSPLSIPT*SATLRNSDTLV
Trigger: GACGAGGGTGTCTGAATTCCTCAAGGTCGCCGAGCAAGTTGGTATTGATAAAGGTGACATTCCCGACCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 72 bp AAACTCCAGCAGTGCATCGATCTGCCCCTGCAGGATTaGCATACTCTTCAGGAGCTTTTCAGGAACCATCGT +
Preference number: 6 (lower is better)
Translates to: KLQQCIDLPLQD*HTLQELFRNHR
Trigger: ACGATGGTTCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGCACTGCTGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS CAA 90 bp GATCGCCTAAACCATCAAACACTGATGGGTCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCTCGAAACTGGGTT +
Preference number: 6 (lower is better)
Translates to: DRLNHQTLMGQKSCC*KSKASFQKLPRNWV
Trigger: AACCCAGTTTCGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGTGTTTGATGGTTTAGGCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS TCA 72 bp TACTCTTCAGGAGCTTTTCAGGAACCATCGTCCTCATaGCACCGTCAGCCCCTTTCTTCACTCTGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: YSSGAFQEPSSS*HRQPLSSLWQS
Trigger: ACTTTGCCAGAGTGAAGAAAGGGGCTGACGGTGTCATGAGGACGATGGTTCCTGAAAAGCTCCTGAAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 72 bp TTTGGATGCACATCAAACTCCAGCAGTGCATCGATCTaGCCCTGCAGGATTGGCATACTCTTCAGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: FGCTSNSSSASI*PCRIGILFRSF
Trigger: AAAGCTCCTGAAGAGTATGCCAATCCTGCAGGGGCAGATCGATGCACTGCTGGAGTTTGATGTGCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS GCA 72 bp AAACAGGTCTATGCTAGGAGCCGCGTCTGGCTTAGGTaGTGCAGCAACTTCAGGAGCAGAATCAAACAAATC +
Preference number: 6 (lower is better)
Translates to: KQVYARSRVWLR*CSNFRSRIKQI
Trigger: GATTTGTTTGATTCTGCTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGCATAGACCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp CGCCTAAACCATCAAACACTGATGGGTCAAAAGAGCTaGTGCTTGAAGTCGAAGGCGTCGTTCCAAAAGCTG +
Preference number: 6 (lower is better)
Translates to: RLNHQTLMGQKS*CLKSKASFQKL
Trigger: CAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGTGTTTGATGGTTTAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CCA 72 bp ATGTGGTACCAGAAATCCCAAGATTGCCTACTAAACTaGCCAGAGACGAGTCAAGGTCACTTCCGAGGCCTT +
Preference number: 6 (lower is better)
Translates to: MWYQKSQDCLLN*PETSQGHFRGL
Trigger: AAGGCCTCGGAAGTGACCTTGACTCGTCTCTGGCCAGTTTAGTAGGCAATCTTGGGATTTCTGGTACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS CAA 72 bp AACCATCAAACACTGATGGGTCAAAAGAGCTGCTGCTaGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCTCGA +
Preference number: 6 (lower is better)
Translates to: NHQTLMGQKSCC*KSKASFQKLPR
Trigger: TCGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGTGTTTGATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp CTAAACCATCAAACACTGATGGGTCAAAAGAGCTGCTaGTTGAAGTCGAAGGCGTCGTTCCAAAAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: LNHQTLMGQKSC*LKSKASFQKLP
Trigger: AGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGTGTTTGATGGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2
CDS GCA 72 bp ACCGTCAGCCCCTTTCTTCACTCTGGCAAAGTCAAATaGCATCTGTCTGTAGGAGAAAGCCTTTTCATTCAA +
Preference number: 6 (lower is better)
Translates to: TVSPFLHSGKVK*HLSVGESLFIQ
Trigger: TTGAATGAAAAGGCTTTCTCCTACAGACAGATGGCATTTGACTTTGCCAGAGTGAAGAAAGGGGCTGACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000191290.3
ENSMUST00000239074.2
CDS CCA 72 bp TATGTCAACTGGCGGGGATGTGTCGATAGTTTTAGCTaGTGTAGAATTAGGAGATGTAACAGTTGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: YVNWRGCVDSFS*CRIRRCNSCGW
Trigger: CCAGCCACAACTGTTACATCTCCTAATTCTACACCAGCTAAAACTATCGACACATCCCCGCCAGTTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036347.13
ENSMUST00000074468.13
ENSMUST00000074501.12
ENSMUST00000098495.10
ENSMUST00000239074.2