Pregenerated sensors for SNAP47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009894Ensembl transcript IDs: ENSMUST00000010038.10, ENSMUST00000120940.8, ENSMUST00000132969.8, ENSMUST00000136436.2, ENSMUST00000156146.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCCCCGGGAAACATACATGCTCATGCATATTGTGGCCTCTCCTaGCCCATCCTAGGAAGGTGTAGTTCCCAGGTAGGGCCTCATAGT | + |
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Preference number: 1 (lower is better) Translates to: RAPGNIHAHAYCGLS*PILGRCSSQVGPHS Trigger: ACTATGAGGCCCTACCTGGGAACTACACCTTCCTAGGATGGGCCAGGAGAGGCCACAATATGCATGAGCATGTATGTTTCCCGGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| 3UTR-3UTR TCA 90 bp | AGAACTCTAACTGATGATCAGGAAAAGGTGGCAGGGGCTACAGCAGCATTTGAAGAAAAGATGACAATATaGTGTGACAACATGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: RTLTDDQEKVAGATAAFEEKMTI*CDNMMP Trigger: TGGCATCATGTTGTCACATCATATTGTCATCTTTTC...TTCAAATGCTGCTGTAGCCCCTGCCACCTTTTCCTGATCATCAGTTAGAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGATGTAAGTCATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACCCCGGGAAACATACATaGTCATGCATATTGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SDVSHRINILLLRTHRGYPGKHT*SCILWP Trigger: AGGCCACAATATGCATGAGCATGTATGTTTCCCGGG...GTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATGACTTACATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| 3UTR CCA 72 bp | GGAAACATACATGCTCATGCATATTGTGGCCTCTCCTaGCCCATCCTAGGAAGGTGTAGTTCCCAGGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: GNIHAHAYCGLS*PILGRCSSQVG Trigger: CCCTACCTGGGAACTACACCTTCCTAGGATGGGCCAGGAGAGGCCACAATATGCATGAGCATGTATGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| 3UTR TCA 72 bp | CTACTGTTTGGCAAAAATGGTGAAAAGATGACAATATaGTGTGACAACATGATGCCACAATGGCAGCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: LLFGKNGEKMTI*CDNMMPQWQLN Trigger: GTTGAGCTGCCATTGTGGCATCATGTTGTCACATCATATTGTCATCTTTTCACCATTTTTGCCAAACAGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | GGGCTACAGCAGCATTTGAAGGGGGAATTGATGTTTCTGGCAAGTGGATGGCAGCTGGCGTTCCAGCTCTaGCTCAGTGTCCAGTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: GLQQHLKGELMFLASGWQLAFQL*LSVQCE Trigger: CTCGCACTGGACACTGAGGCAGAGCTGGAACGCCAG...CTGCCATCCACTTGCCAGAAACATCAATTCCCCCTTCAAATGCTGCTGTAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| 3UTR CAA 72 bp | AGGTGGCAGGGGCTACAGCAGCATTTGAAGGGGGAATaGATGTTTCTGGCAAGTGGATGGCAGAGCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: RWQGLQQHLKGE*MFLASGWQSQT Trigger: GGTCTGGCTCTGCCATCCACTTGCCAGAAACATCAATTCCCCCTTCAAATGCTGCTGTAGCCCCTGCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGGCTACAGCAGCATTTGAAGGGGGAATTGATGTTTCTGGCAAGTGGATGCAGCCCTTCGGTCTaGATGCTGCATGCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQGLQQHLKGELMFLASGCSPSV*MLHASL Trigger: CAGAGAGGCATGCAGCATCCAGACCGAAGGGCTGCA...TCCACTTGCCAGAAACATCAATTCCCCCTTCAAATGCTGCTGTAGCCCCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR TCA 90 bp | TCACAGTACCCAGAATGGCTTCCCGGGTCTCAGGGGAAAGGAAAAGGGCTAATATCGACTAGGCTGCAGTaGGCTGAACCAGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQYPEWLPGSQGKGKGLISTRLQ*AEPVLG Trigger: ACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGA...TATTAGCCCTTTTCCTTTCCCCTGAGACCCGGGAAGCCATTCTGGGTACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | CTGGCAAGTGGATGGCAGAGCCAGACCAGAATGACTGACATTTTTCTCTACTGTGCTCTCGGTGTGGAGTaGAGCCCTTCGGTCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: LASGWQSQTRMTDIFLYCALGVE*SPSVWM Trigger: CATCCAGACCGAAGGGCTGCACTCCACACCGAGAGC...ACAGTAGAGAAAAATGTCAGTCATTCTGGTCTGGCTCTGCCATCCACTTGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | GGAAAAGGGCTAATAGCAATAGAATCAGCAGAGCCATGCCAGGGGTGGCTGTTTTTCTGCAGCTGCAGCTaGTCGCCTTCCTGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIAIESAEPCQGWLFFCSCS*SPSCPP Trigger: AGGAGGACAGGAAGGCGAGCAGCTGCAGCTGCAGAA...AAACAGCCACCCCTGGCATGGCTCTGCTGATTCTATTGCTATTAGCCCTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR CCA 90 bp | AGAACTCTAACTGATGATCAGGAAAAGGTGGCAGGGGCTACAGCAGCATTTGAAGCAGCAGTGCCTGGCTaGGACAGTAGCAGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLTDDQEKVAGATAAFEAAVPG*DSSSSL Trigger: GAGGGAGCTGCTACTGTCCCAGCCAGGCACTGCTGC...TTCAAATGCTGCTGTAGCCCCTGCCACCTTTTCCTGATCATCAGTTAGAGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR CCA 90 bp | TCACAGTACCCAGAATGGCTTCCCGGGTCTCAGGGGAAAGGAAAAGGGCTAATAATCTGTGTCAGCTCCTaGGCTTCCCCCTCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQYPEWLPGSQGKGKGLIICVSS*ASPSEN Trigger: GTTCTCTGAGGGGGAAGCCCAGGAGCTGACACAGAT...TATTAGCCCTTTTCCTTTCCCCTGAGACCCGGGAAGCCATTCTGGGTACTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | AGGAAAAGGGCTAATAGCAATAGAATCAGCAGAGCCATGCCAGGGGTGGCTGTTAGTGAGCTGAACCAGTaGTTGGTCTGGCCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RKRANSNRISRAMPGVAVSELNQ*LVWPFS Trigger: GGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACT...AACAGCCACCCCTGGCATGGCTCTGCTGATTCTATTGCTATTAGCCCTTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR TCA 90 bp | TGGCAGGGGCTACAGCAGCATTTGAAGGGGGAATTGATGTTTCTGGCAAGTGGACTTCTAAGATGGGAATaGCCTCTGGCATCTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQGLQQHLKGELMFLASGLLRWE*PLASWQ Trigger: CTGCCAAGATGCCAGAGGTCATTCCCATCTTAGAAG...TCCACTTGCCAGAAACATCAATTCCCCCTTCAAATGCTGCTGTAGCCCCTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | ATAGCAATAGAATCAGCAGAGCCATGCCAGGGGTGGCTGTTTACAGCTTGCCCCGCGTTTCTGGGAATTTaGCATCAGTCCTATCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IAIESAEPCQGWLFTACPAFLGI*HQSYQL Trigger: GAGCTGATAGGACTGATGGCAAATTCCCAGAAACGC...GGGGCAAGCTGTAAACAGCCACCCCTGGCATGGCTCTGCTGATTCTATTGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | AGGAAAAGGGCTAATAGCAATAGAATCAGCAGAGCCATGCCAGGGGTGGCTGTTAAGTTCTTCTGCAGCTaGAGCTGCTCGCCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRANSNRISRAMPGVAVKFFCS*SCSPSC Trigger: ACAGGAAGGCGAGCAGCTGCAGCTGCAGAAGAACTT...AACAGCCACCCCTGGCATGGCTCTGCTGATTCTATTGCTATTAGCCCTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR CCA 90 bp | AGAACTCTAACTGATGATCAGGAAAAGGTGGCAGGGGCTACAGCAGCATTTGAATCAGCTCCTGTCCCCTaGTCACGTGGGAGGGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLTDDQEKVAGATAAFESAPVP*SRGRVC Trigger: ACATACCCTCCCACGTGACCAGGGGACAGGAGCTGA...TTCAAATGCTGCTGTAGCCCCTGCCACCTTTTCCTGATCATCAGTTAGAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR TCA 90 bp | AGAACTCTAACTGATGATCAGGAAAAGGTGGCAGGGGCTACAGCAGCATTTGAACGGAGACCAGGACAGTaGGCTTTCCCAGCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLTDDQEKVAGATAAFERRPGQ*AFPAWN Trigger: ATTCCAAGCTGGGAAAGCTCACTGTCCTGGTCTCCG...TTCAAATGCTGCTGTAGCCCCTGCCACCTTTTCCTGATCATCAGTTAGAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | AGAACTCTAACTGATGATCAGGAAAAGGTGGCAGGGGCTACAGCAGCATTTGAAGGTCTGGATGCTGCATaGCTCTCTGCAGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLTDDQEKVAGATAAFEGLDAA*LSAEEA Trigger: TGCTTCCTCTGCAGAGAGGCATGCAGCATCCAGACC...TTCAAATGCTGCTGTAGCCCCTGCCACCTTTTCCTGATCATCAGTTAGAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR CCA 90 bp | AGTGGATGGCAGAGCCAGACCAGAATGACTGACATTTTTCTCTACTGTTTGGCAAACCAGTGCTTGGTCTaGCCCTTCTCCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGWQSQTRMTDIFLYCLANQCLV*PFSRTV Trigger: CACAGTCCTGGAGAAGGGCCAGACCAAGCACTGGTT...TGCCAAACAGTAGAGAAAAATGTCAGTCATTCTGGTCTGGCTCTGCCATCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | AGGAAAAGGGCTAATAGCAATAGAATCAGCAGAGCCATGCCAGGGGTGGCTGTTTCGCTGTGTCTTCCATaGGTTTCTGGGAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKRANSNRISRAMPGVAVSLCLP*VSGNLP Trigger: TGGCAAATTCCCAGAAACGCATGGAAGACACAGCGA...AACAGCCACCCCTGGCATGGCTCTGCTGATTCTATTGCTATTAGCCCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | CTGGCAAGTGGATGGCAGAGCCAGACCAGAATGACTGACATTTTTCTCTACTGTTGCTGCATGCCTCTCTaGAGAGGAAGCAAAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: LASGWQSQTRMTDIFLYCCCMPL*RGSKDL Trigger: AAGGTCTTTGCTTCCTCTGCAGAGAGGCATGCAGCA...ACAGTAGAGAAAAATGTCAGTCATTCTGGTCTGGCTCTGCCATCCACTTGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR CCA 90 bp | ACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACTGATGCAGCAGTGCCTGGCTaGGACAGTAGCAGCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TFFYYAHTEATGYRTLTDAAVPG*DSSSSL Trigger: GAGGGAGCTGCTACTGTCCCAGCCAGGCACTGCTGC...ATCAGTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR CCA 90 bp | ACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACTGATCGTGGGAGGGTATGTTaGCAGCAGTGCCTGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TFFYYAHTEATGYRTLTDRGRVC*QQCLAG Trigger: CCCAGCCAGGCACTGCTGCCAACATACCCTCCCACG...ATCAGTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR CCA 90 bp | GGAAAAGGGCTAATAGCAATAGAATCAGCAGAGCCATGCCAGGGGTGGCTGTTTGATGGGAATGACCTCTaGCATCTTGGCAGATATCAG | + |
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Preference number: 4 (lower is better) Translates to: GKGLIAIESAEPCQGWLFDGNDL*HLGRYQ Trigger: CTGATATCTGCCAAGATGCCAGAGGTCATTCCCATC...AAACAGCCACCCCTGGCATGGCTCTGCTGATTCTATTGCTATTAGCCCTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | GGGCTACAGCAGCATTTGAAGGGGGAATTGATGTTTCTGGCAAGTGGATGGCAGATCTTGCTGCTGAACTaGACTTCTAAGATGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: GLQQHLKGELMFLASGWQILLLN*TSKMGM Trigger: CATTCCCATCTTAGAAGTGCAGTTCAGCAGCAAGAT...CTGCCATCCACTTGCCAGAAACATCAATTCCCCCTTCAAATGCTGCTGTAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | TCACAGTACCCAGAATGGCTTCCCGGGTCTCAGGGGAAAGGAAAAGGGCTAATACTTGAGATTTTCTTCTaGCGGCATCTTCCAAAACTT | + |
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Preference number: 4 (lower is better) Translates to: SQYPEWLPGSQGKGKGLILEIFF*RHLPKL Trigger: AAGTTTTGGAAGATGCCGGCAGAAGAAAATCTCAAG...TATTAGCCCTTTTCCTTTCCCCTGAGACCCGGGAAGCCATTCTGGGTACTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | ATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACGTGGCAGGGGCTGCATaGCTCTCTGCAGAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: INILLLRTHRGYWLQNSNVAGAA*LSAEEA Trigger: TGCTTCCTCTGCAGAGAGGCATGCAGCCCCTGCCAC...GTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120940.8 |
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| CDS-3UTR CCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTTCAGCTCCTGTCCCCTaGTCACGTGGGAGGGTATGT | + |
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Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSSAPVP*SRGRVC Trigger: ACATACCCTCCCACGTGACCAGGGGACAGGAGCTGA...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTTCGACTAGGCTGCAGTaGGCTGAACCAGTGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSSTRLQ*AEPVLG Trigger: ACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGA...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | CATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACCGGAGACCAGGACAGTaGGCTTTCCCAGCTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: HRINILLLRTHRGYWLQNRRPGQ*AFPAWN Trigger: ATTCCAAGCTGGGAAAGCTCACTGTCCTGGTCTCCG...GTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR GCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAGTGAGCTGAACCAGTaGTTGGTCTGGCCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSSELNQ*LVWPFS Trigger: GGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACT...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR GCA 90 bp | GATGTAAGTCATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGAGTGGCAAGTTCTTCTaGAGCTGCAGCTGCTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: DVSHRINILLLRTHRGYWSGKFF*SCSCSP Trigger: AGGCGAGCAGCTGCAGCTGCAGAAGAACTTGCCACT...CCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATGACTTACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR CCA 90 bp | ACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACTGATAACCAGTGCTTGGTCTaGCCCTTCTCCAGGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: TFFYYAHTEATGYRTLTDNQCLV*PFSRTV Trigger: CACAGTCCTGGAGAAGGGCCAGACCAAGCACTGGTT...ATCAGTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR GCA 90 bp | TCTGATGTAAGTCATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACGTATGTTGGCAGCAGTaGCTGGCTGGGACAGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SDVSHRINILLLRTHRGYVCWQQ*LAGTVA Trigger: TGCTACTGTCCCAGCCAGGCACTGCTGCCAACATAC...GTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATGACTTACATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | TCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCGGCTGCATGCCTCTCTaGAGAGGAAGCAAAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: SNKHSFITHTQRLLVTELGCMPL*RGSKDL Trigger: AAGGTCTTTGCTTCCTCTGCAGAGAGGCATGCAGCC...GAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | AGTGGATGGCAGAGCCAGACCAGAATGACTGACATTTTTCTCTACTGTTTGGCAAAGGAGAGTGAACCTTaGTATCATCAACATCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGWQSQTRMTDIFLYCLAKESEP*YHQHLP Trigger: AGGAAGATGTTGATGATATCAAGGTTCACTCTCCTT...TGCCAAACAGTAGAGAAAAATGTCAGTCATTCTGGTCTGGCTCTGCCATCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR GCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTACATTTCGACTAGGCTaGAGTGAGCTGAACCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSTFRLG*SELNQC Trigger: GCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGT...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTCACAATGAACTTCAGTaGATGAGGAGTCAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSHNELQ*MRSQGQ Trigger: CTGACCCTGACTCCTCATTCACTGAAGTTCATTGTG...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | ACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACTGATCACAATGAACTTCAGTaGATGAGGAGTCAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TFFYYAHTEATGYRTLTDHNELQ*MRSQGQ Trigger: CTGACCCTGACTCCTCATTCACTGAAGTTCATTGTG...ATCAGTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | GATGTAAGTCATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGAAGACACACCTTCCTTaGGATTTTCTTCTGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: DVSHRINILLLRTHRGYWKTHLP*DFLLPA Trigger: TGCCGGCAGAAGAAAATCTCAAGGAAGGTGTGTCTT...CCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATGACTTACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS-3UTR TCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTTTTCCCAGCTTGGAATaGGACTCTGCTCTCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSFPSLE*DSALSE Trigger: TTCTGAGAGAGCAGAGTCTCATTCCAAGCTGGGAAA...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | ATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACCTTCTAAGATGGGAATaGCCTCTGGCATCTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: INILLLRTHRGYWLQNSNLLRWE*PLASWQ Trigger: CTGCCAAGATGCCAGAGGTCATTCCCATCTTAGAAG...GTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR TCA 90 bp | ACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACTGATGCTCAATCTTGCTGCTaGACTGCACTTCTAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TFFYYAHTEATGYRTLTDAQSCC*TALLRW Trigger: CCATCTTAGAAGTGCAGTTCAGCAGCAAGATTGAGC...ATCAGTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR TCA 90 bp | CATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACGCTCAATCTTGCTGCTaGACTGCACTTCTAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HRINILLLRTHRGYWLQNAQSCC*TALLRW Trigger: CCATCTTAGAAGTGCAGTTCAGCAGCAAGATTGAGC...GTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR GCA 90 bp | TCATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAAACATTTCGACTAGGCTaGAGTGAGCTGAACCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSNKHSFITHTQRLLVTETFRLG*SELNQC Trigger: GCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGT...TTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR GCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTGCGTTTCTGGGAATTTaGCATCAGTCCTATCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSAFLGI*HQSYQL Trigger: GAGCTGATAGGACTGATGGCAAATTCCCAGAAACGC...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACTGATTCGCTGTGTCTTCCATaGGTTTCTGGGAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFFYYAHTEATGYRTLTDSLCLP*VSGNLP Trigger: TGGCAAATTCCCAGAAACGCATGGAAGACACAGCGA...ATCAGTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR GCA 90 bp | TCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCCGAGTCCCTTCATTTTaGTCAGGATCTGTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNKHSFITHTQRLLVTELRVPSF*SGSVSA Trigger: AGCTGACACAGATCCTGAGCAAAATGAAGGGACTCG...GAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS-3UTR CCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTGATGGGAATGACCTCTaGCATCTTGGCAGATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSDGNDL*HLGRYQ Trigger: CTGATATCTGCCAAGATGCCAGAGGTCATTCCCATC...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATGTAAGTCATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTTTCCCAGCTTGGAATaGGACTCTGCTCTCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDVSHRINILLLRTHRGYFPSLE*DSALSE Trigger: TTCTGAGAGAGCAGAGTCTCATTCCAAGCTGGGAAA...GTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATGACTTACATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS-3UTR GCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTATCTTGCTGCTGAACTaGACTTCTAAGATGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSILLLN*TSKMGM Trigger: CATTCCCATCTTAGAAGTGCAGTTCAGCAGCAAGAT...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR TCA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAAGGAGAGTGAACCTTaGTATCATCAACATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RINILLLRTHRGYWLQNSKESEP*YHQHLP Trigger: AGGAAGATGTTGATGATATCAAGGTTCACTCTCCTT...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR GCA 90 bp | TCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCCTTGAGATTTTCTTCTaGCGGCATCTTCCAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SNKHSFITHTQRLLVTELLEIFF*RHLPKL Trigger: AAGTTTTGGAAGATGCCGGCAGAAGAAAATCTCAAG...GAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS GCA 90 bp | GCTGCTCGCCTTCCTGTCCTCCTGTGGGCAGCTCTCGGTGTGGAGTaGAGCCCTTCGGTCTGGATGCTGCATGCCTCTCTGCAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AARLPVLLWAALGVE*SPSVWMLHASLQRK Trigger: CTTCCTCTGCAGAGAGGCATGCAGCATCCAGACCGAAGGGCTGCACTCCACACCGAGAGCTGCCCACAGGAGGACAGGAAGGCGAGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS CCA 90 bp | CTGCAGCTGCTCGCCTTCCTGTCCTCCTGTGGGCAGCTCTCGGTGTaGAGTGCAGCCCTTCGGTCTGGATGCTGCATGCCTCTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQLLAFLSSCGQLSV*SAALRSGCCMPLCR Trigger: TCTGCAGAGAGGCATGCAGCATCCAGACCGAAGGGCTGCACTCCACACCGAGAGCTGCCCACAGGAGGACAGGAAGGCGAGCAGCTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS CCA 90 bp | GCAAGTTCTTCTGCAGCTGCAGCTGCTCGCCTTCCTGTCCTCCTGTaGGCAGCTCTCGGTGTGGAGTGCAGCCCTTCGGTCTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSAAAAARLPVLL*AALGVECSPSVWML Trigger: CAGCATCCAGACCGAAGGGCTGCACTCCACACCGAGAGCTGCCCACAGGAGGACAGGAAGGCGAGCAGCTGCAGCTGCAGAAGAACTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS GCA 90 bp | GCTTCCCCCTCAGAGAACAGTGGCAAGTTCTTCTGCAGCTGCAGCTaGTCGCCTTCCTGTCCTCCTGTGGGCAGCTCTCGGTGTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASPSENSGKFFCSCS*SPSCPPVGSSRCGV Trigger: CACTCCACACCGAGAGCTGCCCACAGGAGGACAGGAAGGCGAGCAGCTGCAGCTGCAGAAGAACTTGCCACTGTTCTCTGAGGGGGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS GCA 90 bp | TCCTGGGCTTCCCCCTCAGAGAACAGTGGCAAGTTCTTCTGCAGCTaGAGCTGCTCGCCTTCCTGTCCTCCTGTGGGCAGCTCTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWASPSENSGKFFCS*SCSPSCPPVGSSRC Trigger: ACACCGAGAGCTGCCCACAGGAGGACAGGAAGGCGAGCAGCTGCAGCTGCAGAAGAACTTGCCACTGTTCTCTGAGGGGGAAGCCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS GCA 90 bp | GTCAGCTCCTGGGCTTCCCCCTCAGAGAACAGTGGCAAGTTCTTCTaGAGCTGCAGCTGCTCGCCTTCCTGTCCTCCTGTGGGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSWASPSENSGKFF*SCSCSPSCPPVGSS Trigger: AGAGCTGCCCACAGGAGGACAGGAAGGCGAGCAGCTGCAGCTGCAGAAGAACTTGCCACTGTTCTCTGAGGGGGAAGCCCAGGAGCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS CCA 90 bp | GCTCAGGATCTGTGTCAGCTCCTGGGCTTCCCCCTCAGAGAACAGTaGCAAGTTCTTCTGCAGCTGCAGCTGCTCGCCTTCCTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQDLCQLLGFPLREQ*QVLLQLQLLAFLSS Trigger: GGAGGACAGGAAGGCGAGCAGCTGCAGCTGCAGAAGAACTTGCCACTGTTCTCTGAGGGGGAAGCCCAGGAGCTGACACAGATCCTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS GCA 90 bp | ATCCAGAGCCGCATCCTGGCGTTCCAGCTCTGCCTCAGTGTCCAGTaGGAGTCCCTTCATTTTGCTCAGGATCTGTGTCAGCTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQSRILAFQLCLSVQ*ESLHFAQDLCQLLG Trigger: GCCCAGGAGCTGACACAGATCCTGAGCAAAATGAAGGGACTCGCACTGGACACTGAGGCAGAGCTGGAACGCCAGGATGCGGCTCTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS GCA 90 bp | GGCGTTCCAGCTCTGCCTCAGTGTCCAGTGCGAGTCCCTTCATTTTaGTCAGGATCTGTGTCAGCTCCTGGGCTTCCCCCTCAGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GVPALPQCPVRVPSF*SGSVSAPGLPPQRT Trigger: TGTTCTCTGAGGGGGAAGCCCAGGAGCTGACACAGATCCTGAGCAAAATGAAGGGACTCGCACTGGACACTGAGGCAGAGCTGGAACGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS CCA 90 bp | TGTCCCCTGGTCACGTGGGAGGGTATGTTGGCAGCAGTGCCTGGCTaGGACAGTAGCAGCTCCCTCCAGAAATGTTCGATGACGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CPLVTWEGMLAAVPG*DSSSSLQKCSMTLK Trigger: CTTCAACGTCATCGAACATTTCTGGAGGGAGCTGCTACTGTCCCAGCCAGGCACTGCTGCCAACATACCCTCCCACGTGACCAGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS CCA 90 bp | TGCGTTTCTGGGAATTTGCCATCAGTCCTATCAGCTCCTGTCCCCTaGTCACGTGGGAGGGTATGTTGGCAGCAGTGCCTGGCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CVSGNLPSVLSAPVP*SRGRVCWQQCLAGT Trigger: TGTCCCAGCCAGGCACTGCTGCCAACATACCCTCCCACGTGACCAGGGGACAGGAGCTGATAGGACTGATGGCAAATTCCCAGAAACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS CCA 90 bp | TTCTCCAGGCCCTTCAGGACGCTGTCCAGCTGTTCGCTCTGCTGCTaGAGATCCTTCGCTGTGTCTTCCATGCGTTTCTGGGAATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSRPFRTLSSCSLCC*RSFAVSSMRFWEFA Trigger: GGCAAATTCCCAGAAACGCATGGAAGACACAGCGAAGGATCTCCAGCAGCAGAGCGAACAGCTGGACAGCGTCCTGAAGGGCCTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS-3UTR CAA 90 bp | CCTCATAGTTTCACAGTACCCAGAATGGCTTCCCGGGTCTCAGGGGAAAGGAAAACGTGGGAGGGTATGTaGGCAGCAGTGCCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHSFTVPRMASRVSGERKTWEGM*AAVPGW Trigger: CCAGCCAGGCACTGCTGCCAACATACCCTCCCACGT...TTTCCTTTCCCCTGAGACCCGGGAAGCCATTCTGGGTACTGTGAAACTATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS CCA 90 bp | TCGCTCTGCTGCTGGAGATCCTTCGCTGTGTCTTCCATGCGTTTCTaGGAATTTGCCATCAGTCCTATCAGCTCCTGTCCCCTGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SLCCWRSFAVSSMRF*EFAISPISSCPLVT Trigger: CGTGACCAGGGGACAGGAGCTGATAGGACTGATGGCAAATTCCCAGAAACGCATGGAAGACACAGCGAAGGATCTCCAGCAGCAGAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS CCA 90 bp | TCCAGTGCGAGTCCCTTCATTTTGCTCAGGATCTGTGTCAGCTCCTaGGCTTCCCCCTCAGAGAACAGTGGCAAGTTCTTCTGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSASPFILLRICVSS*ASPSENSGKFFCSC Trigger: GCAGCTGCAGAAGAACTTGCCACTGTTCTCTGAGGGGGAAGCCCAGGAGCTGACACAGATCCTGAGCAAAATGAAGGGACTCGCACTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS GCA 90 bp | ACGTTGAAGACCACATTTCGACTAGGCTGCAGTGAGCTGAACCAGTaGTTGGTCTGGCCCTTCTCCAGGACTGTGATCGCACCGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: TLKTTFRLGCSELNQ*LVWPFSRTVIAPKI Trigger: TATCTTCGGTGCGATCACAGTCCTGGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGTGGTCTTCAACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS GCA 90 bp | CTCCAGAAATGTTCGATGACGTTGAAGACCACATTTCGACTAGGCTaGAGTGAGCTGAACCAGTGCTTGGTCTGGCCCTTCTCCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LQKCSMTLKTTFRLG*SELNQCLVWPFSRT Trigger: AGTCCTGGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGTGGTCTTCAACGTCATCGAACATTTCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS CCA 90 bp | ACCACATTTCGACTAGGCTGCAGTGAGCTGAACCAGTGCTTGGTCTaGCCCTTCTCCAGGACTGTGATCGCACCGAAGATAAAGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TTFRLGCSELNQCLV*PFSRTVIAPKIKRD Trigger: ATCTCTCTTTATCTTCGGTGCGATCACAGTCCTGGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS CCA 90 bp | AATGACCTCTGGCATCTTGGCAGATATCAGCTGGTAAGCCACGTCTaGCTTCCCAATGAAGCGCTGGCGTATGCTGACCTCATAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NDLWHLGRYQLVSHV*LPNEALAYADLIRR Trigger: TCTCCTTATGAGGTCAGCATACGCCAGCGCTTCATTGGGAAGCCAGACGTGGCTTACCAGCTGATATCTGCCAAGATGCCAGAGGTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGTACCCAGAATGGCTTCCCGGGTCTCAGGGGAAAGGAAAAGGGCTAATAATACGCCGGTTTTGCTaGTCCACATTCAGGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQYPEWLPGSQGKGKGLIIRRFC*STFRVA Trigger: GGCAACCCTGAATGTGGACAAGCAAAACCGGCGTAT...TATTAGCCCTTTTCCTTTCCCCTGAGACCCGGGAAGCCATTCTGGGTACTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS TCA 90 bp | GAAATGTTCGATGACGTTGAAGACCACATTTCGACTAGGCTGCAGTaGGCTGAACCAGTGCTTGGTCTGGCCCTTCTCCAGGACTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EMFDDVEDHISTRLQ*AEPVLGLALLQDCD Trigger: ATCACAGTCCTGGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGTGGTCTTCAACGTCATCGAACATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
||
| CDS-3UTR CAA 90 bp | CCTCATAGTTTCACAGTACCCAGAATGGCTTCCCGGGTCTCAGGGGAAAGGAAAGAAGACACACCTTCCTaGAGATTTTCTTCTGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHSFTVPRMASRVSGERKEDTPS*RFSSAG Trigger: GCCGGCAGAAGAAAATCTCAAGGAAGGTGTGTCTTC...TTTCCTTTCCCCTGAGACCCGGGAAGCCATTCTGGGTACTGTGAAACTATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS-3UTR CAA 90 bp | TCACAGTACCCAGAATGGCTTCCCGGGTCTCAGGGGAAAGGAAAAGGGCTAATATCTCATACGCCGGTTTaGCTTGTCCACATTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQYPEWLPGSQGKGKGLISHTPV*LVHIQG Trigger: ACCCTGAATGTGGACAAGCAAAACCGGCGTATGAGA...TATTAGCCCTTTTCCTTTCCCCTGAGACCCGGGAAGCCATTCTGGGTACTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS TCA 90 bp | ATTTCCAGAGCGGAGACCAGGACAGTGAGCTTTCCCAGCTTGGAATaGGACTCTGCTCTCTCAGAAATAATAGCAGGGACCGTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ISRAETRTVSFPSLE*DSALSEIIAGTVIT Trigger: TGTGATCACGGTCCCTGCTATTATTTCTGAGAGAGCAGAGTCTCATTCCAAGCTGGGAAAGCTCACTGTCCTGGTCTCCGCTCTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS GCA 90 bp | CTGAGCACTAAGGCGTCTTCCAGGAGCTCAATCTTGCTGCTGAACTaGACTTCTAAGATGGGAATGACCTCTGGCATCTTGGCAGATATC | + |
|
Preference number: 5 (lower is better) Translates to: LSTKASSRSSILLLN*TSKMGMTSGILADI Trigger: GATATCTGCCAAGATGCCAGAGGTCATTCCCATCTTAGAAGTGCAGTTCAGCAGCAAGATTGAGCTCCTGGAAGACGCCTTAGTGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAAGGGCTAATAGCAATAGAATCAGCAGAGCCATGCCAGGGGTGGCTGTTTCCAGGAGCTCAATCTaGCTGCTGAACTGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRANSNRISRAMPGVAVSRSSI*LLNCTS Trigger: AGAAGTGCAGTTCAGCAGCAAGATTGAGCTCCTGGA...AACAGCCACCCCTGGCATGGCTCTGCTGATTCTATTGCTATTAGCCCTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS-3UTR CAA 90 bp | ATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACACGTGGGAGGGTATGTaGGCAGCAGTGCCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: INILLLRTHRGYWLQNSNTWEGM*AAVPGW Trigger: CCAGCCAGGCACTGCTGCCAACATACCCTCCCACGT...GTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR CAA 90 bp | ATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACGAGCTGAACCAGTGCTaGGTCTGGCCCTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: INILLLRTHRGYWLQNSNELNQC*VWPFSR Trigger: CCTGGAGAAGGGCCAGACCAAGCACTGGTTCAGCTC...GTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGATGGCAGAGCCAGACCAGAATGACTGACATTTTTCTCTACTGTTTGGCAAAATGTTCGATGACGTaGAAGACCACATTTCGACTA | + |
|
Preference number: 5 (lower is better) Translates to: SGWQSQTRMTDIFLYCLAKCSMT*KTTFRL Trigger: TAGTCGAAATGTGGTCTTCAACGTCATCGAACATTT...TGCCAAACAGTAGAGAAAAATGTCAGTCATTCTGGTCTGGCTCTGCCATCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS-3UTR CAA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTGAAGACACACCTTCCTaGAGATTTTCTTCTGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RINILLLRTHRGYWLQNSEDTPS*RFSSAG Trigger: GCCGGCAGAAGAAAATCTCAAGGAAGGTGTGTCTTC...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR CAA 90 bp | CGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTTCCAGGAGCTCAATCTaGCTGCTGAACTGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RINILLLRTHRGYWLQNSSRSSI*LLNCTS Trigger: AGAAGTGCAGTTCAGCAGCAAGATTGAGCTCCTGGA...AGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
||
| CDS-3UTR CAA 90 bp | ATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACGCGAGTCCCTTCATTTaGCTCAGGATCTGTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: INILLLRTHRGYWLQNSNASPFI*LRICVS Trigger: GCTGACACAGATCCTGAGCAAAATGAAGGGACTCGC...GTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACTGATTGCGTTTCTGGGAATTaGCCATCAGTCCTATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TFFYYAHTEATGYRTLTDCVSGN*PSVLSA Trigger: AGCTGATAGGACTGATGGCAAATTCCCAGAAACGCA...ATCAGTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR CAA 90 bp | TCATCGAATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAATGCGTTTCTGGGAATTaGCCATCAGTCCTATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SSNKHSFITHTQRLLVTECVSGN*PSVLSA Trigger: AGCTGATAGGACTGATGGCAAATTCCCAGAAACGCA...TTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTATTCGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS-3UTR CAA 90 bp | ATAAACATTCTTTTATTACGCACACACAGAGGCTACTGGTTACAGAACTCTAACAAATGTTCGATGACGTaGAAGACCACATTTCGACTA | + |
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Preference number: 5 (lower is better) Translates to: INILLLRTHRGYWLQNSNKCSMT*KTTFRL Trigger: TAGTCGAAATGTGGTCTTCAACGTCATCGAACATTT...GTTAGAGTTCTGTAACCAGTAGCCTCTGTGTGTGCGTAATAAAAGAATGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS GCA 72 bp | CTTCCTGTCCTCCTGTGGGCAGCTCTCGGTGTGGAGTaGAGCCCTTCGGTCTGGATGCTGCATGCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPVLLWAALGVE*SPSVWMLHASL Trigger: CAGAGAGGCATGCAGCATCCAGACCGAAGGGCTGCACTCCACACCGAGAGCTGCCCACAGGAGGACAGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS CCA 72 bp | GCCATCAGTCCTATCAGCTCCTGTCCCCTGGTCACGTaGGAGGGTATGTTGGCAGCAGTGCCTGGCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AISPISSCPLVT*EGMLAAVPGWD Trigger: GTCCCAGCCAGGCACTGCTGCCAACATACCCTCCCACGTGACCAGGGGACAGGAGCTGATAGGACTGATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS GCA 72 bp | TCCCCCTCAGAGAACAGTGGCAAGTTCTTCTGCAGCTaGAGCTGCTCGCCTTCCTGTCCTCCTGTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPSENSGKFFCS*SCSPSCPPVGS Trigger: GCTGCCCACAGGAGGACAGGAAGGCGAGCAGCTGCAGCTGCAGAAGAACTTGCCACTGTTCTCTGAGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS CCA 72 bp | TCCACAGCTACGGTGATGCCATCCAGAGCCGCATCCTaGCGTTCCAGCTCTGCCTCAGTGTCCAGTGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: STATVMPSRAAS*RSSSASVSSAS Trigger: ACTCGCACTGGACACTGAGGCAGAGCTGGAACGCCAGGATGCGGCTCTGGATGGCATCACCGTAGCTGTGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS GCA 72 bp | TCCAGGCCCTTCAGGACGCTGTCCAGCTGTTCGCTCTaGTGCTGGAGATCCTTCGCTGTGTCTTCCATGCGT | + |
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Preference number: 6 (lower is better) Translates to: SRPFRTLSSCSL*CWRSFAVSSMR Trigger: ACGCATGGAAGACACAGCGAAGGATCTCCAGCAGCAGAGCGAACAGCTGGACAGCGTCCTGAAGGGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS CAA 90 bp | TGGCGTTCCAGCTCTGCCTCAGTGTCCAGTGCGAGTCCCTTCATTTaGCTCAGGATCTGTGTCAGCTCCTGGGCTTCCCCCTCAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: WRSSSASVSSASPFI*LRICVSSWASPSEN Trigger: GTTCTCTGAGGGGGAAGCCCAGGAGCTGACACAGATCCTGAGCAAAATGAAGGGACTCGCACTGGACACTGAGGCAGAGCTGGAACGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS GCA 72 bp | AGGCCCTTCAGGACGCTGTCCAGCTGTTCGCTCTGCTaGTGGAGATCCTTCGCTGTGTCTTCCATGCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPFRTLSSCSLC*WRSFAVSSMRF Trigger: GAAACGCATGGAAGACACAGCGAAGGATCTCCAGCAGCAGAGCGAACAGCTGGACAGCGTCCTGAAGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS GCA 72 bp | GCTCTGCCTCAGTGTCCAGTGCGAGTCCCTTCATTTTaGTCAGGATCTGTGTCAGCTCCTGGGCTTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: ALPQCPVRVPSF*SGSVSAPGLPP Trigger: AGGGGGAAGCCCAGGAGCTGACACAGATCCTGAGCAAAATGAAGGGACTCGCACTGGACACTGAGGCAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS GCA 72 bp | GATGCCATCCAGAGCCGCATCCTGGCGTTCCAGCTCTaGCTCAGTGTCCAGTGCGAGTCCCTTCATTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: DAIQSRILAFQL*LSVQCESLHFA Trigger: AGCAAAATGAAGGGACTCGCACTGGACACTGAGGCAGAGCTGGAACGCCAGGATGCGGCTCTGGATGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS GCA 72 bp | CTCTCGGTGTGGAGTGCAGCCCTTCGGTCTGGATGCTaGATGCCTCTCTGCAGAGGAAGCAAAGACCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LSVWSAALRSGC*MPLCRGSKDLV Trigger: AACAAGGTCTTTGCTTCCTCTGCAGAGAGGCATGCAGCATCCAGACCGAAGGGCTGCACTCCACACCGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS GCA 72 bp | CGCATCCTGGCGTTCCAGCTCTGCCTCAGTGTCCAGTaGGAGTCCCTTCATTTTGCTCAGGATCTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RILAFQLCLSVQ*ESLHFAQDLCQ Trigger: CTGACACAGATCCTGAGCAAAATGAAGGGACTCGCACTGGACACTGAGGCAGAGCTGGAACGCCAGGATGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS GCA 72 bp | TCTCATACGCCGGTTTTGCTTGTCCACATTCAGGGTTaGCCGGTCCACAGCTACGGTGATGCCATCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SHTPVLLVHIQG*PVHSYGDAIQS Trigger: GCTCTGGATGGCATCACCGTAGCTGTGGACCGGGCAACCCTGAATGTGGACAAGCAAAACCGGCGTATGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010038.10 |
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| CDS CCA 72 bp | TGGCATCTTGGCAGATATCAGCTGGTAAGCCACGTCTaGCTTCCCAATGAAGCGCTGGCGTATGCTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: WHLGRYQLVSHV*LPNEALAYADL Trigger: GAGGTCAGCATACGCCAGCGCTTCATTGGGAAGCCAGACGTGGCTTACCAGCTGATATCTGCCAAGATGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS TCA 72 bp | GATGACGTTGAAGACCACATTTCGACTAGGCTGCAGTaGGCTGAACCAGTGCTTGGTCTGGCCCTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DDVEDHISTRLQ*AEPVLGLALLQ Trigger: CTGGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGTGGTCTTCAACGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS GCA 72 bp | TGTTCGATGACGTTGAAGACCACATTTCGACTAGGCTaGAGTGAGCTGAACCAGTGCTTGGTCTGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CSMTLKTTFRLG*SELNQCLVWPF Trigger: GAAGGGCCAGACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGTGGTCTTCAACGTCATCGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS GCA 72 bp | CGCTCTGCTGCTGGAGATCCTTCGCTGTGTCTTCCATaGGTTTCTGGGAATTTGCCATCAGTCCTATCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RSAAGDPSLCLP*VSGNLPSVLSA Trigger: AGCTGATAGGACTGATGGCAAATTCCCAGAAACGCATGGAAGACACAGCGAAGGATCTCCAGCAGCAGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS CCA 72 bp | TGCTGGAGATCCTTCGCTGTGTCTTCCATGCGTTTCTaGGAATTTGCCATCAGTCCTATCAGCTCCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CWRSFAVSSMRF*EFAISPISSCP Trigger: GGGACAGGAGCTGATAGGACTGATGGCAAATTCCCAGAAACGCATGGAAGACACAGCGAAGGATCTCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS CAA 90 bp | TTGAAGACCACATTTCGACTAGGCTGCAGTGAGCTGAACCAGTGCTaGGTCTGGCCCTTCTCCAGGACTGTGATCGCACCGAAGATAAAG | + |
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Preference number: 6 (lower is better) Translates to: LKTTFRLGCSELNQC*VWPFSRTVIAPKIK Trigger: CTTTATCTTCGGTGCGATCACAGTCCTGGAGAAGGGCCAGACCAAGCACTGGTTCAGCTCACTGCAGCCTAGTCGAAATGTGGTCTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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| CDS TCA 72 bp | AGGAGTCATAGATTTCCAGAGCGGAGACCAGGACAGTaGGCTTTCCCAGCTTGGAATGAGACTCTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RSHRFPERRPGQ*AFPAWNETLLS Trigger: AGAGAGCAGAGTCTCATTCCAAGCTGGGAAAGCTCACTGTCCTGGTCTCCGCTCTGGAAATCTATGACTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 |
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| CDS CAA 72 bp | GACAGTAGCAGCTCCCTCCAGAAATGTTCGATGACGTaGAAGACCACATTTCGACTAGGCTGCAGTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: DSSSSLQKCSMT*KTTFRLGCSEL Trigger: CAGCTCACTGCAGCCTAGTCGAAATGTGGTCTTCAACGTCATCGAACATTTCTGGAGGGAGCTGCTACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010038.10 ENSMUST00000120940.8 ENSMUST00000132969.8 ENSMUST00000136436.2 ENSMUST00000156146.8 |
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