Pregenerated sensors for SNAP29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022765Ensembl transcript IDs: ENSMUST00000023449.11
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCCTGAACCTGGAACTCATGGTTACCCTTCTGCCTTGGCCTAAGTaGTGTGATTACTGTGTCAGCCAGCAGATCTGGCTCTGGAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: TLNLELMVTLLPWPK*CDYCVSQQIWLWSF Trigger: GAAACTCCAGAGCCAGATCTGCTGGCTGACACAGTAATCACAGCACTTAGGCCAAGGCAGAAGGGTAACCATGAGTTCCAGGTTCAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 90 bp | GATGAGGTGAGAACAGGTGAGAAGAGGGGCCTAACAGTTCTGCTCTaGGTCCTTCTGCTAAAGTGCAGGACAAGAACAGAAGATGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: DEVRTGEKRGLTVLL*VLLLKCRTRTEDGD Trigger: ATCCCCATCTTCTGTTCTTGTCCTGCACTTTAGCAGAAGGACTCAGAGCAGAACTGTTAGGCCCCTCTTCTCACCTGTTCTCACCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 90 bp | CTGTCCTGGAACTCACAGAGGTCCACTTCAGTCAGATTTCAGATTTaGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCAGAAAGGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LSWNSQRSTSVRFQI*ALSPCGCCIFRKVG Trigger: TCCAACCTTTCTGAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGTGGACCTCTGTGAGTTCCAGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR GCA 90 bp | GTTCTGTATGAACATGGATCCTTTTCAGGGGAGAGAGCTGCCATGTaGTCAGTGTGTGTGCAGGCATGTCCACAAGACTTGTCATATAAA | + |
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Preference number: 1 (lower is better) Translates to: VLYEHGSFSGERAAM*SVCVQACPQDLSYK Trigger: TTTATATGACAAGTCTTGTGGACATGCCTGCACACACACTGAGCACATGGCAGCTCTCTCCCCTGAAAAGGATCCATGTTCATACAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 90 bp | CAGTGTGTGTGCAGGCATGTCCACAAGACTTGTCATATAAAGATGTaGAAGGACCTGTTCTTCTGTCACAAACCCAGGGTCCTTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: QCVCRHVHKTCHIKM*KDLFFCHKPRVLSH Trigger: ATGTGAAAGGACCCTGGGTTTGTGACAGAAGAACAGGTCCTTCCACATCTTTATATGACAAGTCTTGTGGACATGCCTGCACACACACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 90 bp | AAGGCAGTAGTTCTGACACTCTGCCCGTGGCTTTGCAGACACACATaGAATCAGAAATGCAGTACTTTTTCTCCTTCCAGCATAGTGATC | + |
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Preference number: 1 (lower is better) Translates to: KAVVLTLCPWLCRHT*NQKCSTFSPSSIVI Trigger: GATCACTATGCTGGAAGGAGAAAAAGTACTGCATTTCTGATTTCATGTGTGTCTGCAAAGCCACGGGCAGAGTGTCAGAACTACTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 90 bp | ATCAGTCTCTCTATATTGTTTGAGACAGATCTTAGTATATCGTCCTaGCTGTCCTGGAACTCACAGAGGTCCACTTCAGTCAGATTTCAG | + |
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Preference number: 1 (lower is better) Translates to: ISLSILFETDLSISS*LSWNSQRSTSVRFQ Trigger: CTGAAATCTGACTGAAGTGGACCTCTGTGAGTTCCAGGACAGCCAGGACGATATACTAAGATCTGTCTCAAACAATATAGAGAGACTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 90 bp | GAGGTCCACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTaGTTGCTGTATTTTCAGAAAGGTTGGATAATTTTTGACAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: EVHFSQISDLGPFSL*LLYFQKGWIIFDKS Trigger: ACTCTTGTCAAAAATTATCCAACCTTTCTGAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGTGGACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 90 bp | GAAAGGGAAATTAAGACTCTCTGCTCTCTTGTTTTACTTGTTACATaGATGAACATCAGGCCTCTCCTACAGAATGAGGAAAACCAACTG | + |
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Preference number: 1 (lower is better) Translates to: EREIKTLCSLVLLVT*MNIRPLLQNEENQL Trigger: CAGTTGGTTTTCCTCATTCTGTAGGAGAGGCCTGATGTTCATTCATGTAACAAGTAAAACAAGAGAGCAGAGAGTCTTAATTTCCCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACCATGGGAATCTGGGATaGATGAGGAGACTCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LVCETESPFHFCLPPRQHHGNLG*MRRLQA Trigger: TGCCTGGAGTCTCCTCATCCATCCCAGATTCCCATG...GTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR TCA 90 bp | GTTACAAATGCCACCTTTCTGAAGGTAGGGTGCTTCAGTCTGTCTTGCAGACCTGCCAGAGCGCAGGAGTaGGTCTTTCTTCCCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VTNATFLKVGCFSLSCRPARAQE*VFLPSL Trigger: GAGGGAGGGAAGAAAGACTCACTCCTGCGCTCTGGC...AGGTCTGCAAGACAGACTGAAGCACCCTACCTTCAGAAAGGTGGCATTTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACCTTAGTATATCGTCCTaGCTGTCCTGGAACTCACAG | + |
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Preference number: 2 (lower is better) Translates to: LVCETESPFHFCLPPRQHLSISS*LSWNSQ Trigger: CTGTGAGTTCCAGGACAGCCAGGACGATATACTAAG...GTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACTAACATCTTCTCATCAGGATaGAGCAGAGTTCCTCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: SVRQKVHSTSACHLANTNIFSSG*SRVPPP Trigger: CGGAGGAGGAACTCTGCTCCATCCTGATGAGAAGAT...GTTAGTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | GTTACAAATGCCACCTTTCTGAAGGTAGGGTGCTTCAGTCTGTCTTGCAGACCTTCGTCCTGGCTGTCCTaGAACTCACAGAGGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: VTNATFLKVGCFSLSCRPSSWLS*NSQRST Trigger: AGTGGACCTCTGTGAGTTCCAGGACAGCCAGGACGA...AGGTCTGCAAGACAGACTGAAGCACCCTACCTTCAGAAAGGTGGCATTTGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CAA 90 bp | GCTGTCCTGGAACTCACAGAGGTCCACTTCAGTCAGATTTCAGATTaGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCAGAAAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: AVLELTEVHFSQISD*GPFSLWLLYFQKGW Trigger: CCAACCTTTCTGAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGTGGACCTCTGTGAGTTCCAGGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CAA 90 bp | AGAGCTGCCATGTGCTCAGTGTGTGTGCAGGCATGTCCACAAGACTaGTCATATAAAGATGTGGAAGGACCTGTTCTTCTGTCACAAACC | + |
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Preference number: 2 (lower is better) Translates to: RAAMCSVCVQACPQD*SYKDVEGPVLLSQT Trigger: GGTTTGTGACAGAAGAACAGGTCCTTCCACATCTTTATATGACAAGTCTTGTGGACATGCCTGCACACACACTGAGCACATGGCAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACTAACCATTTCCGTTCTGTATaGACATGGATCCTTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SVRQKVHSTSACHLANTNHFRSV*TWILFR Trigger: CCTGAAAAGGATCCATGTTCATACAGAACGGAAATG...GTTAGTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR TCA 90 bp | AGCAGATCTGGCTCTGGAGTTTCCCCAAGTCCTTTGTATCTGTGTCTTCCAAACTGTTACCCCATTTTCTaGTCCTCTCCTCAATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SRSGSGVSPSPLYLCLPNCYPIF*SSPQWW Trigger: CCACCATTGAGGAGAGGATCAGAAAATGGGGTAACA...GTTTGGAAGACACAGATACAAAGGACTTGGGGAAACTCCAGAGCCAGATCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR GCA 90 bp | ACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCGTAGTTCTGACACTCTaGCCGTGGCTTTGCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: TSVRFQIWALSPCGCCIFVVLTL*PWLCRH Trigger: GTGTCTGCAAAGCCACGGGCAGAGTGTCAGAACTAC...GAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGATCTGGCTCTGGAGTTTCCCCAAGTCCTTTGTATCTGTGTCTTCCAAACCGTAGCTATGGAGAATaGATGGGAATCTGGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: SRSGSGVSPSPLYLCLPNRSYGE*MGIWDG Trigger: TCCATCCCAGATTCCCATGCATTCTCCATAGCTACG...GTTTGGAAGACACAGATACAAAGGACTTGGGGAAACTCCAGAGCCAGATCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | ACCCACTGCTTGCTTTGCTTTAAGGTACTGCAGACTCCAGATGCAAAAGGAAGGGCTATGGAGAATGCATaGGAATCTGGGATGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: THCLLCFKVLQTPDAKGRAMENA*ESGMDE Trigger: CTCATCCATCCCAGATTCCCATGCATTCTCCATAGC...CCTTCCTTTTGCATCTGGAGTCTGCAGTACCTTAAAGCAAAGCAAGCAGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGACTTTATTGGCAGTACAAGGACCTACCAGTTGGCTTTaGGCCAGTGGAGAAAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: FKIVRCSVASVTLLAVQGPTSWL*ASGESP Trigger: GGGACTTTCTCCACTGGCTCAAAGCCAACTGGTAGG...TCCTTGTACTGCCAATAAAGTCACTGAAGCCACAGAACACCTGACTATCTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCCTAACAGTTCTGCTCTaGGTCCTTCTGCTAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TSVRFQIWALSPCGCCIFLTVLL*VLLLKC Trigger: GCACTTTAGCAGAAGGACTCAGAGCAGAACTGTTAG...GAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR TCA 90 bp | GTTACAAATGCCACCTTTCTGAAGGTAGGGTGCTTCAGTCTGTCTTGCAGACCTTTTTCTTTTGGAAACTaGAGGGAGTGGACACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: VTNATFLKVGCFSLSCRPFSFGN*REWTQA Trigger: AGCTTGTGTCCACTCCCTTCAGTTTCCAAAAGAAAA...AGGTCTGCAAGACAGACTGAAGCACCCTACCTTCAGAAAGGTGGCATTTGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTTCAGTGACTTTATTGGCAGTACAAGGAAAAATTCTTGCAAGAATCAATTGGCTTTGAGCCAGTaGAGAAAGTCCCCATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CGFSDFIGSTRKNSCKNQLALSQ*RKSPSE Trigger: CTCTGATGGGGACTTTCTCCACTGGCTCAAAGCCAA...TTGATTCTTGCAAGAATTTTTCCTTGTACTGCCAATAAAGTCACTGAAGCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTTCAGTGACTTTATTGGCAGTACAAGGAAAAATTCTTGCAAGAATCAAAGTCCCCATCAGAGATaGAAAGATGAGGTGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: CGFSDFIGSTRKNSCKNQSPHQR*KDEVRT Trigger: TGTTCTCACCTCATCTTTCCATCTCTGATGGGGACT...TTGATTCTTGCAAGAATTTTTCCTTGTACTGCCAATAAAGTCACTGAAGCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCTTCAGTGACTTTATTGGCAGTACAAGGAAAAATTCTTGCAAGAATCAACTCAGTAATACTCCATaGACACAAACCAACCTACCA | + |
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Preference number: 2 (lower is better) Translates to: CGFSDFIGSTRKNSCKNQLSNTP*TQTNLP Trigger: TGGTAGGTTGGTTTGTGTGCATGGAGTATTACTGAG...TTGATTCTTGCAAGAATTTTTCCTTGTACTGCCAATAAAGTCACTGAAGCCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTTCAGTGACTTTATTGGCAGTACAAGGAAAAATTCTTGCAAGAATCAAAATAAACAAGGCCTTTaGTTCTATTCCCAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: CGFSDFIGSTRKNSCKNQNKQGL*FYSQRQ Trigger: CTGCCTCTGGGAATAGAACCAAAGGCCTTGTTTATT...TTGATTCTTGCAAGAATTTTTCCTTGTACTGCCAATAAAGTCACTGAAGCCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR GCA 72 bp | GAACATGGATCCTTTTCAGGGGAGAGAGCTGCCATGTaGTCAGTGTGTGTGCAGGCATGTCCACAAGACTTG | + |
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Preference number: 3 (lower is better) Translates to: EHGSFSGERAAM*SVCVQACPQDL Trigger: CAAGTCTTGTGGACATGCCTGCACACACACTGAGCACATGGCAGCTCTCTCCCCTGAAAAGGATCCATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR GCA 72 bp | CTGGAACTCATGGTTACCCTTCTGCCTTGGCCTAAGTaGTGTGATTACTGTGTCAGCCAGCAGATCTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: LELMVTLLPWPK*CDYCVSQQIWL Trigger: GAGCCAGATCTGCTGGCTGACACAGTAATCACAGCACTTAGGCCAAGGCAGAAGGGTAACCATGAGTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 72 bp | ACCCTGAACCTGGAACTCATGGTTACCCTTCTGCCTTaGCCTAAGTGCTGTGATTACTGTGTCAGCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TLNLELMVTLLP*PKCCDYCVSQQ Trigger: CTGCTGGCTGACACAGTAATCACAGCACTTAGGCCAAGGCAGAAGGGTAACCATGAGTTCCAGGTTCAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR GCA 72 bp | CCCAAGTCCTTTGTATCTGTGTCTTCCAAACAACCCTaGTTTGTAAGGCAGCATCTGCCTCAGCCAGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PKSFVSVSSKQP*FVRQHLPQPVS Trigger: GGAGACTGGCTGAGGCAGATGCTGCCTTACAAAGCAGGGTTGTTTGGAAGACACAGATACAAAGGACTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | CGTAGCTATGGAGAATGCATGGGAATCTGGGATGGATaGGGAGACTCCAGGCACCGAATAAACAAGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: RSYGECMGIWDG*GDSRHRINKAF Trigger: AAAGGCCTTGTTTATTCGGTGCCTGGAGTCTCCTCATCCATCCCAGATTCCCATGCATTCTCCATAGCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 72 bp | CCTAAGTGCTGTGATTACTGTGTCAGCCAGCAGATCTaGCTCTGGAGTTTCCCCAAGTCCTTTGTATCTGTG | + |
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Preference number: 3 (lower is better) Translates to: PKCCDYCVSQQI*LWSFPKSFVSV Trigger: CACAGATACAAAGGACTTGGGGAAACTCCAGAGCCAGATCTGCTGGCTGACACAGTAATCACAGCACTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | AGAACAGGTGAGAAGAGGGGCCTAACAGTTCTGCTCTaGGTCCTTCTGCTAAAGTGCAGGACAAGAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: RTGEKRGLTVLL*VLLLKCRTRTE Trigger: TTCTGTTCTTGTCCTGCACTTTAGCAGAAGGACTCAGAGCAGAACTGTTAGGCCCCTCTTCTCACCTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | TACTCCATGCACACAAACCAACCTACCAGTTGGCTTTaGGCCAGTGGAGAAAGTCCCCATCAGAGATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: YSMHTNQPTSWL*ASGESPHQRWK Trigger: TTTCCATCTCTGATGGGGACTTTCTCCACTGGCTCAAAGCCAACTGGTAGGTTGGTTTGTGTGCATGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CAA 90 bp | AGCAGATCTGGCTCTGGAGTTTCCCCAAGTCCTTTGTATCTGTGTCTTCCAAACCCTTTCTCCCTGTGGTaGCTGTATTTTCAGAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: SRSGSGVSPSPLYLCLPNPFSLW*LYFQKG Trigger: ACCTTTCTGAAAATACAGCAACCACAGGGAGAAAGG...GTTTGGAAGACACAGATACAAAGGACTTGGGGAAACTCCAGAGCCAGATCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | GTTCTGACACTCTGCCCGTGGCTTTGCAGACACACATaGAATCAGAAATGCAGTACTTTTTCTCCTTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VLTLCPWLCRHT*NQKCSTFSPSS Trigger: GCTGGAAGGAGAAAAAGTACTGCATTTCTGATTTCATGTGTGTCTGCAAAGCCACGGGCAGAGTGTCAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | ATAGGGACAATGAAGGCAACACATTTCCGTTCTGTATaGACATGGATCCTTTTCAGGGGAGAGAGCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: IGTMKATHFRSV*TWILFRGESCH Trigger: ATGGCAGCTCTCTCCCCTGAAAAGGATCCATGTTCATACAGAACGGAAATGTGTTGCCTTCATTGTCCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | CTTCAGTGGACCACAGAGTCTGAAGAACAGACTGGATaGGGACCTCTAATGGTTACAGGAAGACTGTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LQWTTESEEQTG*GPLMVTGRLFH Trigger: ATGAAACAGTCTTCCTGTAACCATTAGAGGTCCTCATCCAGTCTGTTCTTCAGACTCTGTGGTCCACTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | ACATCAGGCCTCTCCTACAGAATGAGGAAAACCAACTaGAGACGTCACTCTAATGCTGCTAAGTTACACGTC | + |
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Preference number: 3 (lower is better) Translates to: TSGLSYRMRKTN*RRHSNAAKLHV Trigger: GACGTGTAACTTAGCAGCATTAGAGTGACGTCTTCAGTTGGTTTTCCTCATTCTGTAGGAGAGGCCTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 72 bp | TTTGAGACAGATCTTAGTATATCGTCCTGGCTGTCCTaGAACTCACAGAGGTCCACTTCAGTCAGATTTCAG | + |
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Preference number: 3 (lower is better) Translates to: FETDLSISSWLS*NSQRSTSVRFQ Trigger: CTGAAATCTGACTGAAGTGGACCTCTGTGAGTTCCAGGACAGCCAGGACGATATACTAAGATCTGTCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CCA 72 bp | TCTATATTGTTTGAGACAGATCTTAGTATATCGTCCTaGCTGTCCTGGAACTCACAGAGGTCCACTTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SILFETDLSISS*LSWNSQRSTSV Trigger: GACTGAAGTGGACCTCTGTGAGTTCCAGGACAGCCAGGACGATATACTAAGATCTGTCTCAAACAATATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCTTCAGTGACTTTATTGGCAGTACAAGGAAAAATTCTTGCAAGAATCAAACCTACCAGTTGGCTTaGAGCCAGTGGAGAAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: CGFSDFIGSTRKNSCKNQTYQLA*SQWRKS Trigger: GGACTTTCTCCACTGGCTCAAAGCCAACTGGTAGGT...TTGATTCTTGCAAGAATTTTTCCTTGTACTGCCAATAAAGTCACTGAAGCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | AGACTCTCTGCTCTCTTGTTTTACTTGTTACATGAATaGACATCAGGCCTCTCCTACAGAATGAGGAAAACC | + |
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Preference number: 3 (lower is better) Translates to: RLSALLFYLLHE*TSGLSYRMRKT Trigger: GGTTTTCCTCATTCTGTAGGAGAGGCCTGATGTTCATTCATGTAACAAGTAAAACAAGAGAGCAGAGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR-3UTR CAA 90 bp | TTCAAAATATGTGAGTTTGATTTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGAAACCAACCTACCAGTaGGCTTTGAGCCAGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: FKICEFDFKIVRCSVASVKPTYQ*ALSQWR Trigger: TCTCCACTGGCTCAAAGCCAACTGGTAGGTTGGTTT...CACTGAAGCCACAGAACACCTGACTATCTTAAAATCAAACTCACATATTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR TCA 72 bp | ATTAAGACTCTCTGCTCTCTTGTTTTACTTGTTACATaGATGAACATCAGGCCTCTCCTACAGAATGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: IKTLCSLVLLVT*MNIRPLLQNEE Trigger: TTCCTCATTCTGTAGGAGAGGCCTGATGTTCATTCATGTAACAAGTAAAACAAGAGAGCAGAGAGTCTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS-3UTR GCA 90 bp | CTGGTCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACTGGGCTGGGAGACGATaGTGCCATTCTGCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVCETESPFHFCLPPRQHWAGRR*CHSAQV Trigger: CACCTGAGCAGAATGGCAGCATCGTCTCCCAGCCCA...GTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACTAACAATCTGCTGTTGGGCTaGGAGACGATGCTGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SVRQKVHSTSACHLANTNNLLLG*ETMLPF Trigger: GAATGGCAGCATCGTCTCCCAGCCCAACAGCAGATT...GTTAGTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCTCTAGGACTCCTCGCTaGCGGACCAGCTCCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSVRFQIWALSPCGCCIFSRTPR*RTSSSE Trigger: TTCCGAGGAGCTGGTCCGGCAGCGAGGAGTCCTAGA...GAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACAAGGGTCGAGTTCTTTaGGTAAACCTCAGTATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVCETESPFHFCLPPRQHKGRVL*VNLSIH Trigger: GTGAATACTGAGGTTTACCCAAAGAACTCGACCCTT...GTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR GCA 90 bp | TCTGTGAGACAGAAAGTCCATTCCACTTCTGCCTGCCACCTCGCCAACACTAACTCCTCAATTTCTGTCTaGATTCCCAAGGCTATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVRQKVHSTSACHLANTNSSISV*IPKAMS Trigger: GGACATAGCCTTGGGAATGCAGACAGAAATTGAGGA...GTTAGTGTTGGCGAGGTGGCAGGCAGAAGTGGAATGGACTTTCTGTCTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| 3UTR CAA 72 bp | ATACTCCATGCACACAAACCAACCTACCAGTTGGCTTaGAGCCAGTGGAGAAAGTCCCCATCAGAGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILHAHKPTYQLA*SQWRKSPSEME Trigger: TTCCATCTCTGATGGGGACTTTCTCCACTGGCTCAAAGCCAACTGGTAGGTTGGTTTGTGTGCATGGAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| 3UTR CAA 72 bp | TCAGTAATACTCCATGCACACAAACCAACCTACCAGTaGGCTTTGAGCCAGTGGAGAAAGTCCCCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVILHAHKPTYQ*ALSQWRKSPSE Trigger: CTCTGATGGGGACTTTCTCCACTGGCTCAAAGCCAACTGGTAGGTTGGTTTGTGTGCATGGAGTATTACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| 3UTR CAA 72 bp | TGCCACCTTTCTGAAGGTAGGGTGCTTCAGTCTGTCTaGCAGACCTCACATGACAAGGATATGTTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHLSEGRVLQSV*QTSHDKDMFTG Trigger: ACCAGTGAACATATCCTTGTCATGTGAGGTCTGCAAGACAGACTGAAGCACCCTACCTTCAGAAAGGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CCA 90 bp | TTCAAAATATGTGAGTTTGATTTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGACTGCTGCCTGTCAATaGGCGCGTCGGGGCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKICEFDFKIVRCSVASVTAACQ*ARRGRQ Trigger: CTGACGGCCCCGACGCGCCCATTGACAGGCAGCAGT...CACTGAAGCCACAGAACACCTGACTATCTTAAAATCAAACTCACATATTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CCA 90 bp | CATATAAAGATGTGGAAGGACCTGTTCTTCTGTCACAAACCCAGGGTCCTTTCAGCCATTCTGCTCAGGTaGAGGCTCTACTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HIKMWKDLFFCHKPRVLSAILLR*RLYWFG Trigger: TCCAAACCAGTAGAGCCTCCACCTGAGCAGAATGGC...TGAAAGGACCCTGGGTTTGTGACAGAAGAACAGGTCCTTCCACATCTTTATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGATCTGGCTCTGGAGTTTCCCCAAGTCCTTTGTATCTGTGTCTTCCAAACCTAGCTTGTCCACTTTaGTTGTCAGTCGGTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSGSGVSPSPLYLCLPNLACPL*LSVGQG Trigger: TCCTTGACCGACTGACAACCAAAGTGGACAAGCTAG...GTTTGGAAGACACAGATACAAAGGACTTGGGGAAACTCCAGAGCCAGATCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR TCA 90 bp | CATATAAAGATGTGGAAGGACCTGTTCTTCTGTCACAAACCCAGGGTCCTTTCATCTCCGATTCATACATaGGAGACAAGGACCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIKMWKDLFFCHKPRVLSSPIHT*ETRTCW Trigger: CCAGCAGGTCCTTGTCTCTCATGTATGAATCGGAGA...TGAAAGGACCCTGGGTTTGTGACAGAAGAACAGGTCCTTCCACATCTTTATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR TCA 90 bp | TTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGACTTTATTGGCAGTACAAGGACATCCTGTAGCCTTCTaGGGTTTGGGTGGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKIVRCSVASVTLLAVQGHPVAF*GLGGWL Trigger: AAGCCAGCCACCCAAACCTCAGAAGGCTACAGGATG...TCCTTGTACTGCCAATAAAGTCACTGAAGCCACAGAACACCTGACTATCTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CCA 90 bp | ACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCTTTGGGTGGCTGGCTTaGTACTTGTTTTCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVRFQIWALSPCGCCIFFGWLA*YLFSWS Trigger: AGACCAGGAAAACAAGTACCAAGCCAGCCACCCAAA...GAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| 3UTR CAA 72 bp | ATGTGCTCAGTGTGTGTGCAGGCATGTCCACAAGACTaGTCATATAAAGATGTGGAAGGACCTGTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCSVCVQACPQD*SYKDVEGPVLL Trigger: CAGAAGAACAGGTCCTTCCACATCTTTATATGACAAGTCTTGTGGACATGCCTGCACACACACTGAGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| 3UTR CAA 72 bp | ATGAAAGGCAGTAGTTCTGACACTCTGCCCGTGGCTTaGCAGACACACATGAAATCAGAAATGCAGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MKGSSSDTLPVA*QTHMKSEMQYF Trigger: AAAGTACTGCATTTCTGATTTCATGTGTGTCTGCAAAGCCACGGGCAGAGTGTCAGAACTACTGCCTTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR TCA 90 bp | ACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCCTCATCTTCAAATCCTaGTCCATCTTGTCTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSVRFQIWALSPCGCCIFLIFKS*SILSTI Trigger: GATGGTAGACAAGATGGATCAGGATTTGAAGATGAG...GAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CCA 90 bp | TTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGACTTTATTGGCAGTACAAGGAAGGTGGAGGCTCTACTaGTTTGGATTTGAAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKIVRCSVASVTLLAVQGRWRLY*FGFEVV Trigger: AACTACTTCAAATCCAAACCAGTAGAGCCTCCACCT...TCCTTGTACTGCCAATAAAGTCACTGAAGCCACAGAACACCTGACTATCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| 3UTR CAA 72 bp | AGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTaGCTGTATTTTCAGAAAGGTTGGATAATTTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQISDLGPFSLW*LYFQKGWIIFD Trigger: GTCAAAAATTATCCAACCTTTCTGAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| 3UTR CAA 72 bp | AGTGGAAATACATATGGATCAGTCTCTCTATATTGTTaGAGACAGATCTTAGTATATCGTCCTGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNTYGSVSLYC*RQILVYRPGCP Trigger: AGGACAGCCAGGACGATATACTAAGATCTGTCTCAAACAATATAGAGAGACTGATCCATATGTATTTCCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS-3UTR GCA 90 bp | TTCAAAATATGTGAGTTTGATTTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGACAGCTCATCTAGGTTaGTGTCAATCTTCTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKICEFDFKIVRCSVASVTAHLG*CQSSGD Trigger: ATCACCAGAAGATTGACAGCAACCTAGATGAGCTGT...CACTGAAGCCACAGAACACCTGACTATCTTAAAATCAAACTCACATATTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS GCA 90 bp | GCGGTAGCCTCGGCCCTGCGCAACACCTCCTGTCTCAGGTACTGCTaGCTGTCAATGGGCGCGTCGGGGCCGTCAGGCAGGTCGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: AVASALRNTSCLRYC*LSMGASGPSGRSRT Trigger: CGTCCGCGACCTGCCTGACGGCCCCGACGCGCCCATTGACAGGCAGCAGTACCTGAGACAGGAGGTGTTGCGCAGGGCCGAGGCTACCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS GCA 90 bp | GCAGCGGTAGCCTCGGCCCTGCGCAACACCTCCTGTCTCAGGTACTaGTGCCTGTCAATGGGCGCGTCGGGGCCGTCAGGCAGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVASALRNTSCLRY*CLSMGASGPSGRSR Trigger: CCGCGACCTGCCTGACGGCCCCGACGCGCCCATTGACAGGCAGCAGTACCTGAGACAGGAGGTGTTGCGCAGGGCCGAGGCTACCGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 90 bp | CGGCCCTGCGCAACACCTCCTGTCTCAGGTACTGCTGCCTGTCAATaGGCGCGTCGGGGCCGTCAGGCAGGTCGCGGACGTCCTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RPCATPPVSGTAACQ*ARRGRQAGRGRPST Trigger: CGTGGAAGGACGTCCGCGACCTGCCTGACGGCCCCGACGCGCCCATTGACAGGCAGCAGTACCTGAGACAGGAGGTGTTGCGCAGGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS TCA 90 bp | AAGGTTCTTTGGGGACCGAGTCTAGTTCTGCATCCTGTAGCCTTCTaGGGTTTGGGTGGCTGGCTTGGTACTTGTTTTCCTGGTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KVLWGPSLVLHPVAF*GLGGWLGTCFPGLY Trigger: GTAAAGACCAGGAAAACAAGTACCAAGCCAGCCACCCAAACCTCAGAAGGCTACAGGATGCAGAACTAGACTCGGTCCCCAAAGAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 90 bp | TGTTCCTCAATTTCTGTCTGCATTCCCAAGGCTATGTCCTTCAGGTaGCCTAATCCCACGGACAGCTCATCTAGGTTGCTGTCAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSISVCIPKAMSFR*PNPTDSSSRLLSIF Trigger: GAAGATTGACAGCAACCTAGATGAGCTGTCCGTGGGATTAGGCCACCTGAAGGACATAGCCTTGGGAATGCAGACAGAAATTGAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 90 bp | TTTCCTGGTCTTTACTTGTATTTATGGCTTCTTTCAATCTGCTGTTaGGCTGGGAGACGATGCTGCCATTCTGCTCAGGTGGAGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: FPGLYLYLWLLSICC*AGRRCCHSAQVEAL Trigger: TAGAGCCTCCACCTGAGCAGAATGGCAGCATCGTCTCCCAGCCCAACAGCAGATTGAAAGAAGCCATAAATACAAGTAAAGACCAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 90 bp | GGTGGCTGGCTTGGTACTTGTTTTCCTGGTCTTTACTTGTATTTATaGCTTCTTTCAATCTGCTGTTGGGCTGGGAGACGATGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGWLGTCFPGLYLYL*LLSICCWAGRRCCH Trigger: ATGGCAGCATCGTCTCCCAGCCCAACAGCAGATTGAAAGAAGCCATAAATACAAGTAAAGACCAGGAAAACAAGTACCAAGCCAGCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 90 bp | GGGACCGAGTCTAGTTCTGCATCCTGTAGCCTTCTGAGGTTTGGGTaGCTGGCTTGGTACTTGTTTTCCTGGTCTTTACTTGTATTTATG | + |
|
Preference number: 5 (lower is better) Translates to: GTESSSASCSLLRFG*LAWYLFSWSLLVFM Trigger: CATAAATACAAGTAAAGACCAGGAAAACAAGTACCAAGCCAGCCACCCAAACCTCAGAAGGCTACAGGATGCAGAACTAGACTCGGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCTCTAGCTTGTCCACTTaGGTTGTCAGTCGGTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSVRFQIWALSPCGCCIFSSLST*VVSRSR Trigger: CCTTGACCGACTGACAACCAAAGTGGACAAGCTAGA...GAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 90 bp | GTTGCTGTCAATCTTCTGGTGATAAGTTCGAAGGGTCGAGTTCTTTaGGTAAACCTCAGTATTCACAGTAGAAGAAGGTTCTTTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VAVNLLVISSKGRVL*VNLSIHSRRRFFGD Trigger: GTCCCCAAAGAACCTTCTTCTACTGTGAATACTGAGGTTTACCCAAAGAACTCGACCCTTCGAACTTATCACCAGAAGATTGACAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTCAGATTTCAGATTTGGGCCCTTTCTCCCTGTGGTTGCTGTATTTTCACACTCTTAATGCTGTaGATATGTTTCTGGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TSVRFQIWALSPCGCCIFTLLML*ICFWLI Trigger: GATGAGCCAGAAACATATCAACAGCATTAAGAGTGT...GAAAATACAGCAACCACAGGGAGAAAGGGCCCAAATCTGAAATCTGACTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS TCA 90 bp | ACACTCTTAATGCTGTTGATATGTTTCTGGCTCATCTTCAAATCCTaGTCCATCTTGTCTACCATCTTCTCTGTGTGTTCTAGGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLMLLICFWLIFKS*SILSTIFSVCSRTP Trigger: AGGAGTCCTAGAACACACAGAGAAGATGGTAGACAAGATGGATCAGGATTTGAAGATGAGCCAGAAACATATCAACAGCATTAAGAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CAA 90 bp | CACATGAAATCAGAAATGCAGTACTTTTTCTCCTTCCAGCATAGTGATCAAAGGTGGCTGGCTTGGTACTaGTTTTCCTGGTCTTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: HMKSEMQYFFSFQHSDQRWLAWY*FSWSLL Trigger: AAGTAAAGACCAGGAAAACAAGTACCAAGCCAGCCA...CCTTTGATCACTATGCTGGAAGGAGAAAAAGTACTGCATTTCTGATTTCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CAA 90 bp | TTCAAAATATGTGAGTTTGATTTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGGCTTGTCCACTTTGGTaGTCAGTCGGTCAAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: FKICEFDFKIVRCSVASVACPLW*SVGQGC Trigger: ACATCCTTGACCGACTGACAACCAAAGTGGACAAGC...CACTGAAGCCACAGAACACCTGACTATCTTAAAATCAAACTCACATATTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS-3UTR CAA 90 bp | TTCAAAATATGTGAGTTTGATTTTAAGATAGTCAGGTGTTCTGTGGCTTCAGTGATATTGACATCTAGCTaGTCCACTTTGGTTGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FKICEFDFKIVRCSVASVILTSS*STLVVS Trigger: ACTGACAACCAAAGTGGACAAGCTAGATGTCAATAT...CACTGAAGCCACAGAACACCTGACTATCTTAAAATCAAACTCACATATTTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS GCA 72 bp | GCCTCGGCCCTGCGCAACACCTCCTGTCTCAGGTACTaGTGCCTGTCAATGGGCGCGTCGGGGCCGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASALRNTSCLRY*CLSMGASGPSG Trigger: GCCTGACGGCCCCGACGCGCCCATTGACAGGCAGCAGTACCTGAGACAGGAGGTGTTGCGCAGGGCCGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS GCA 72 bp | TCGGCCCTGCGCAACACCTCCTGTCTCAGGTACTGCTaGCTGTCAATGGGCGCGTCGGGGCCGTCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SALRNTSCLRYC*LSMGASGPSGR Trigger: CCTGCCTGACGGCCCCGACGCGCCCATTGACAGGCAGCAGTACCTGAGACAGGAGGTGTTGCGCAGGGCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 72 bp | GCAACACCTCCTGTCTCAGGTACTGCTGCCTGTCAATaGGCGCGTCGGGGCCGTCAGGCAGGTCGCGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: ATPPVSGTAACQ*ARRGRQAGRGR Trigger: ACGTCCGCGACCTGCCTGACGGCCCCGACGCGCCCATTGACAGGCAGCAGTACCTGAGACAGGAGGTGTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS GCA 72 bp | TCTACCATCTTCTCTGTGTGTTCTAGGACTCCTCGCTaGCGGACCAGCTCCTCGGAAGAGGCGACTCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: STIFSVCSRTPR*RTSSSEEATPI Trigger: GATCGGAGTCGCCTCTTCCGAGGAGCTGGTCCGGCAGCGAGGAGTCCTAGAACACACAGAGAAGATGGTAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS GCA 72 bp | TGGCTTCTTTCAATCTGCTGTTGGGCTGGGAGACGATaGTGCCATTCTGCTCAGGTGGAGGCTCTACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WLLSICCWAGRR*CHSAQVEALLV Trigger: AACCAGTAGAGCCTCCACCTGAGCAGAATGGCAGCATCGTCTCCCAGCCCAACAGCAGATTGAAAGAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS TCA 72 bp | TGGGGACCGAGTCTAGTTCTGCATCCTGTAGCCTTCTaGGGTTTGGGTGGCTGGCTTGGTACTTGTTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WGPSLVLHPVAF*GLGGWLGTCFP Trigger: AGGAAAACAAGTACCAAGCCAGCCACCCAAACCTCAGAAGGCTACAGGATGCAGAACTAGACTCGGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS GCA 72 bp | AATCTGCTGTTGGGCTGGGAGACGATGCTGCCATTCTaGTCAGGTGGAGGCTCTACTGGTTTGGATTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: NLLLGWETMLPF*SGGGSTGLDLK Trigger: CTTCAAATCCAAACCAGTAGAGCCTCCACCTGAGCAGAATGGCAGCATCGTCTCCCAGCCCAACAGCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS GCA 72 bp | TCAGGTGGCCTAATCCCACGGACAGCTCATCTAGGTTaGTGTCAATCTTCTGGTGATAAGTTCGAAGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGGLIPRTAHLG*CQSSGDKFEGS Trigger: CGACCCTTCGAACTTATCACCAGAAGATTGACAGCAACCTAGATGAGCTGTCCGTGGGATTAGGCCACCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS CCA 72 bp | CTTGTATTTATGGCTTCTTTCAATCTGCTGTTGGGCTaGGAGACGATGCTGCCATTCTGCTCAGGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVFMASFNLLLG*ETMLPFCSGGG Trigger: GCCTCCACCTGAGCAGAATGGCAGCATCGTCTCCCAGCCCAACAGCAGATTGAAAGAAGCCATAAATACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS CCA 72 bp | ATTTCTGTCTGCATTCCCAAGGCTATGTCCTTCAGGTaGCCTAATCCCACGGACAGCTCATCTAGGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ISVCIPKAMSFR*PNPTDSSSRLL Trigger: CAGCAACCTAGATGAGCTGTCCGTGGGATTAGGCCACCTGAAGGACATAGCCTTGGGAATGCAGACAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS CCA 72 bp | CTTTACTTGTATTTATGGCTTCTTTCAATCTGCTGTTaGGCTGGGAGACGATGCTGCCATTCTGCTCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LYLYLWLLSICC*AGRRCCHSAQV Trigger: CACCTGAGCAGAATGGCAGCATCGTCTCCCAGCCCAACAGCAGATTGAAAGAAGCCATAAATACAAGTAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS CCA 72 bp | TCTAGTTCTGCATCCTGTAGCCTTCTGAGGTTTGGGTaGCTGGCTTGGTACTTGTTTTCCTGGTCTTTACTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSASCSLLRFG*LAWYLFSWSLL Trigger: AAGTAAAGACCAGGAAAACAAGTACCAAGCCAGCCACCCAAACCTCAGAAGGCTACAGGATGCAGAACTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
||
| CDS CCA 72 bp | GACGATGCTGCCATTCTGCTCAGGTGGAGGCTCTACTaGTTTGGATTTGAAGTAGTTGATAAATCCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: DDAAILLRWRLY*FGFEVVDKSSK Trigger: TTTGGAGGATTTATCAACTACTTCAAATCCAAACCAGTAGAGCCTCCACCTGAGCAGAATGGCAGCATCGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CAA 72 bp | TCTGTGCTTTTTATATTGACATCTAGCTTGTCCACTTaGGTTGTCAGTCGGTCAAGGATGTCATCCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SVLFILTSSLST*VVSRSRMSSCS Trigger: GGAACAGGATGACATCCTTGACCGACTGACAACCAAAGTGGACAAGCTAGATGTCAATATAAAAAGCACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS CCA 72 bp | AATCTTCTGGTGATAAGTTCGAAGGGTCGAGTTCTTTaGGTAAACCTCAGTATTCACAGTAGAAGAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: NLLVISSKGRVL*VNLSIHSRRRF Trigger: GAACCTTCTTCTACTGTGAATACTGAGGTTTACCCAAAGAACTCGACCCTTCGAACTTATCACCAGAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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| CDS TCA 72 bp | ATGCTGTTGATATGTTTCTGGCTCATCTTCAAATCCTaGTCCATCTTGTCTACCATCTTCTCTGTGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: MLLICFWLIFKS*SILSTIFSVCS Trigger: AGAACACACAGAGAAGATGGTAGACAAGATGGATCAGGATTTGAAGATGAGCCAGAAACATATCAACAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023449.11 |
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