Pregenerated sensors for SNAP25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027273Ensembl transcript IDs: ENSMUST00000028727.11, ENSMUST00000110098.4
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCATTGGGAAGCTGACAGAGCACACAGGACATTTACAATGGGGGTaGCTGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: IIGKLTEHTGHLQWG*LTLCVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAGAGTCAGTCACCCCCATTGTAAATGTCCTGTGTGCTCTGTCAGCTTCCCAATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR TCA 90 bp | TGTGTGTATGTGCAAGACCTACTAGGTAATACCATGAGAGAAGCATaGAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: CVYVQDLLGNTMREA*RSSLVQQHLEESTA Trigger: TGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTTCTCTCATGGTATTACCTAGTAGGTCTTGCACATACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR TCA 90 bp | GTTTTACAAGAACAATACTGTGTATTGAGAAAATCAACAGCACATTaGGCATTCCTAAATTGTTGTCATTCAGCAAACGCCACTGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VLQEQYCVLRKSTAH*AFLNCCHSANATEK Trigger: TTTCTCAGTGGCGTTTGCTGAATGACAACAATTTAGGAATGCTCAATGTGCTGTTGATTTTCTCAATACACAGTATTGTTCTTGTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGCACACAGGACATTTACAATGGGGGTGACTGACTCTGTGTGTGTGTGTGTGTTGTCCAACAACATTTaGAGGAGAGCACAGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RAHRTFTMGVTDSVCVCVLSNNI*RRAQQK Trigger: CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAA...CACACACACACACACAGAGTCAGTCACCCCCATTGTAAATGTCCTGTGTGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGATTGTGGCAGTAGCTCTGTGGAATGTCACAGTTTTACAAGAACAATAATTAGAGCCACCAGATaGCCACTATGTACAGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: RKDCGSSSVECHSFTRTIIRATR*PLCTAF Trigger: AAAGGCTGTACATAGTGGTCATCTGGTGGCTCTAAT...TATTGTTCTTGTAAAACTGTGACATTCCACAGAGCTACTGCCACAATCCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR-3UTR TCA 90 bp | TTGCTAGAAATGATTAATGGTGTGTTAAATCCACTTTGTGTGTGTGTGTGTGTGTTGACAGAAAGAAGGTaGCACAGCTGCAGGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLEMINGVLNPLCVCVCVLTERR*HSCRFC Trigger: GCAAAACCTGCAGCTGTGTCACCTTCTTTCTGTCAA...CACACACACACACACACAAAGTGGATTTAACACACCATTAATCATTTCTAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGATTGTGGCAGTAGCTCTGTGGAATGTCACAGTTTTACAAGAACAATATTGTCCAACAACATTTaGAGGAGAGCACAGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RKDCGSSSVECHSFTRTILSNNI*RRAQQK Trigger: CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAA...TATTGTTCTTGTAAAACTGTGACATTCCACAGAGCTACTGCCACAATCCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR-3UTR TCA 90 bp | CAACAGAGGAGACAGGAGGGATTTAATATACATGCTGTAATGATATTTATCTCACATTTACAATGGGGGTaGCTGACTCTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QQRRQEGFNIHAVMIFISHLQWG*LTLCVC Trigger: ACACACACACAGAGTCAGTCACCCCCATTGTAAATG...TGAGATAAATATCATTACAGCATGTATATTAAATCCCTCCTGTCTCCTCTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR-3UTR CCA 90 bp | CAACAGAGGAGACAGGAGGGATTTAATATACATGCTGTAATGATATTTATCTCAAACACATGGTATCATTaGGAAGCTGACAGAGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: QQRRQEGFNIHAVMIFISNTWYH*EADRAH Trigger: GTGTGCTCTGTCAGCTTCCCAATGATACCATGTGTT...TGAGATAAATATCATTACAGCATGTATATTAAATCCCTCCTGTCTCCTCTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR TCA 72 bp | AAGCTGACAGAGCACACAGGACATTTACAATGGGGGTaGCTGACTCTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: KLTEHTGHLQWG*LTLCVCVCVCV Trigger: CACACACACACACACACACACACACAGAGTCAGTCACCCCCATTGTAAATGTCCTGTGTGCTCTGTCAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGCACACAGGACATTTACAATGGGGGTGACTGACTCTGTGTGTGTGTGTGTGCATGAAGGAGCTCTCTaGTCCAACAACATTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RAHRTFTMGVTDSVCVCVHEGAL*SNNIWR Trigger: CCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATG...CACACACACACACACAGAGTCAGTCACCCCCATTGTAAATGTCCTGTGTGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTTGTCCAACAACATTaGGAGGAGAGCACAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLLVQQH*EESTAE Trigger: TTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAG...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCATGAAGGAGCTCTCTaGTCCAACAACATTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCVCVYVQDHEGAL*SNNIWR Trigger: CCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATG...GTCTTGCACATACACACACACACACACACACACACACACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTAATCTTGTCCAACAACATTaGGAGGAGAGCACAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVYVQDLLGNLVQQH*EESTAE Trigger: TTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAG...ATTACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR TCA 72 bp | GTGCAAGACCTACTAGGTAATACCATGAGAGAAGCATaGAGGAGCTCTCTTGTCCAACAACATTTGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: VQDLLGNTMREA*RSSLVQQHLEE Trigger: CTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTTCTCTCATGGTATTACCTAGTAGGTCTTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| 3UTR TCA 72 bp | AGAAAGAAGGTGACACAGCTGCAGGTTTTGCTGGTATaGCTTAATCTTGACAGTGTCCCAATACTGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: RKKVTQLQVLLV*LNLDSVPILSM Trigger: CATGCTCAGTATTGGGACACTGTCAAGATTAAGTCATACCAGCAAAACCTGCAGCTGTGTCACCTTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR CCA 72 bp | CAAAGAATAGCCATGAGGAACCAAAGACAGCACATTTaGAGAGATTCAGAGCCTGACACCCTAAGAAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: QRIAMRNQRQHI*RDSEPDTLRKD Trigger: ATCCTTTCTTAGGGTGTCAGGCTCTGAATCTCTCCAAATGTGCTGTCTTTGGTTCCTCATGGCTATTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR-3UTR CAA 90 bp | CAACAGAGGAGACAGGAGGGATTTAATATACATGCTGTAATGATATTTATCTCAAGCATTCCTAAATTGTaGTCATTCAGCAAACGCCAC | + |
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Preference number: 3 (lower is better) Translates to: QQRRQEGFNIHAVMIFISSIPKL*SFSKRH Trigger: GTGGCGTTTGCTGAATGACAACAATTTAGGAATGCT...TGAGATAAATATCATTACAGCATGTATATTAAATCCCTCCTGTCTCCTCTGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR TCA 72 bp | GAACAATACTGTGTATTGAGAAAATCAACAGCACATTaGGCATTCCTAAATTGTTGTCATTCAGCAAACGCC | + |
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Preference number: 3 (lower is better) Translates to: EQYCVLRKSTAH*AFLNCCHSANA Trigger: GGCGTTTGCTGAATGACAACAATTTAGGAATGCTCAATGTGCTGTTGATTTTCTCAATACACAGTATTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| 3UTR-3UTR CAA 90 bp | CAACAGAGGAGACAGGAGGGATTTAATATACATGCTGTAATGATATTTATCTCATGCGTAGTTGTTGCTTaGTTATTGTTGCTGTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: QQRRQEGFNIHAVMIFISCVVVA*LLLLLC Trigger: ACACAACAGCAACAATAACAAAGCAACAACTACGCA...TGAGATAAATATCATTACAGCATGTATATTAAATCCCTCCTGTCTCCTCTGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| CDS-3UTR TCA 90 bp | AAGCATGAAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCAGAAGGGCGGAGGTTTCCGATaGTGCCGCTCACCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KHEGALLSNNIWRRAQQKGGGFR*CRSPAP Trigger: TGGAGCAGGTGAGCGGCATCATCGGAAACCTCCGCC...CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTAACCACACGGGCAGGCTaGCTGGCCACTACTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLTTRAG*LATTPS Trigger: GGATGGAGTAGTGGCCAGCCAGCCTGCCCGTGTGGT...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | AAGCATGAAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCAGAAGCAACCAGCTGCAGCATaGGACGGGTGCTTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KHEGALLSNNIWRRAQQKQPAAA*DGCFPG Trigger: CCCTGGAAAGCACCCGTCGCATGCTGCAGCTGGTTG...CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTCAACCAGCTGCAGCATaGGACGGGTGCTTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGQPAAA*DGCFPG Trigger: CCCTGGAAAGCACCCGTCGCATGCTGCAGCTGGTTG...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCACGGGCAGGCTGGCTaGCCACTACTCCATCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCVYVQDHGQAG*PLLHPD Trigger: ATCAGGATGGAGTAGTGGCCAGCCAGCCTGCCCGTG...GTCTTGCACATACACACACACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACACGGGCAGGCTGGCTaGCCACTACTCCATCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLHGQAG*PLLHPD Trigger: ATCAGGATGGAGTAGTGGCCAGCCAGCCTGCCCGTG...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACGACTCATCAGCCAGCTaGTCAGCCCTCCTCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCVYVQDDSSAS*SALLCI Trigger: GATGCAGAGGAGGGCTGACCAGCTGGCTGATGAGTC...GTCTTGCACATACACACACACACACACACACACACACACACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTTCTCCTCCAGCTCATTaGGCATGTCTGCGTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGSPPAH*ACLRLR Trigger: CCGAAGACGCAGACATGCGCAATGAGCTGGAGGAGA...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | AAGCATGAAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCAGAAGTCTCCTCCAGCTCATTaGGCATGTCTGCGTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: KHEGALLSNNIWRRAQQKSPPAH*ACLRLR Trigger: CCGAAGACGCAGACATGCGCAATGAGCTGGAGGAGA...CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTCCACTGATGGCCATCTaGTCCCGTTCATCCACCACA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGPLMAI*SRSSTT Trigger: TGTGGTGGATGAACGGGAGCAGATGGCCATCAGTGG...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTATGATGCCGCTCACCTaGTCCAGGTTCTCATCCATC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGMMPLT*SRFSSI Trigger: GATGGATGAGAACCTGGAGCAGGTGAGCGGCATCAT...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTATGATGCCGCTCACCTaGTCCAGGTTCTCATCCATC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCVCARPMMPLT*SRFSSI Trigger: GATGGATGAGAACCTGGAGCAGGTGAGCGGCATCAT...AGGTCTTGCACATACACACACACACACACACACACACACACACACACACACACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTAATGACTCATCAGCCAGCTaGTCAGCCCTCCTCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVYVQDLLGNDSSAS*SALLCI Trigger: GATGCAGAGGAGGGCTGACCAGCTGGCTGATGAGTC...ATTACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTGCCACTACTCCATCCTaGTTATTGCCCCAGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGATTPS*LLPQAF Trigger: AAAAGCCTGGGGCAATAATCAGGATGGAGTAGTGGC...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTAATCTCTCTTCAACCAGCTaGAGCATGCGACGGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVYVQDLLGNLSSTS*SMRRVL Trigger: AAGCACCCGTCGCATGCTGCAGCTGGTTGAAGAGAG...ATTACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACCATCCCTTCCTCAATaGGTTCCAGTTGTTCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLPSLPQ*VPVVRL Trigger: AAGGCGAACAACTGGAACGCATTGAGGAAGGGATGG...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| CDS-3UTR CCA 90 bp | AAGCATGAAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCAGAAGTCGATCTGGCGATTCTaGGTGTCAATCTCATTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KHEGALLSNNIWRRAQQKSIWRF*VSISLP Trigger: GGGCAATGAGATTGACACCCAGAATCGCCAGATCGA...CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | AGAGCACACAGGACATTTACAATGGGGGTGACTGACTCTGTGTGTGTGTGTGTGATGATCCTGTCGATCTaGCGATTCTGGGTGTCAATC | + |
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Preference number: 4 (lower is better) Translates to: RAHRTFTMGVTDSVCVCVMILSI*RFWVSI Trigger: GATTGACACCCAGAATCGCCAGATCGACAGGATCAT...CACACACACACACACAGAGTCAGTCACCCCCATTGTAAATGTCCTGTGTGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTTCCCAGCATCTTTGTTaGACGTTGGTTGGCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGSQHLC*TLVGFI Trigger: GATGAAGCCAACCAACGTGCAACAAAGATGCTGGGA...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTATCCCAGCATCTTTGTTaGACGTTGGTTGGCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLSQHLC*TLVGFI Trigger: GATGAAGCCAACCAACGTGCAACAAAGATGCTGGGA...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | AAGCATGAAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCAGAAGATGATCCTGTCGATCTaGCGATTCTGGGTGTCAATC | + |
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Preference number: 4 (lower is better) Translates to: KHEGALLSNNIWRRAQQKMILSI*RFWVSI Trigger: GATTGACACCCAGAATCGCCAGATCGACAGGATCAT...CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR TCA 90 bp | CAACAGAGGAGACAGGAGGGATTTAATATACATGCTGTAATGATATTTATCTCAGGCGGAGGTTTCCGATaGTGCCGCTCACCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QQRRQEGFNIHAVMIFISGGGFR*CRSPAP Trigger: TGGAGCAGGTGAGCGGCATCATCGGAAACCTCCGCC...TGAGATAAATATCATTACAGCATGTATATTAAATCCCTCCTGTCTCCTCTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTGCCTCCTTCATGTCTTaGTTGATATGGTTCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGASFMS*LIWFMP Trigger: AGGCATGAACCATATCAACCAAGACATGAAGGAGGC...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110098.4 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTCCTTCATGTCTTGGTTaGTATGGTTCATGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGPSCLG*YGSCLL Trigger: AAGAAGGCATGAACCATATCAACCAAGACATGAAGG...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110098.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTTCCAGTTGTTCGCCTTaGTCATCCAACATAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGSSCSP*SSNITK Trigger: TTTGGTTATGTTGGATGAGCAAGGCGAACAACTGGA...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTTCGAGTTGTTCGCCTTaGTCATCCAACATAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGSSCSP*SSNITK Trigger: TTTGGTTATGTTGGATGAGCAAGGCGAACAACTCGA...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | AGAGCACACAGGACATTTACAATGGGGGTGACTGACTCTGTGTGTGTGTGTGTGTTGTTGCACGTTGGTTaGCTTCATCAATTCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAHRTFTMGVTDSVCVCVLLHVG*LHQFWF Trigger: AAACCAGAATTGATGAAGCCAACCAACGTGCAACAA...CACACACACACACACAGAGTCAGTCACCCCCATTGTAAATGTCCTGTGTGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTATGGCTTCATCAATTCTaGTTTTGTTGGAATCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLWLHQF*FCWNQP Trigger: AGGCTGATTCCAACAAAACCAGAATTGATGAAGCCA...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | AAGCATGAAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCAGAAGTTGTTGCACGTTGGTTaGCTTCATCAATTCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHEGALLSNNIWRRAQQKLLHVG*LHQFWF Trigger: AAACCAGAATTGATGAAGCCAACCAACGTGCAACAA...CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTATCTTTGTTGCACGTTaGTTGGCTTCATCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGIFVAR*LASSIL Trigger: CAGAATTGATGAAGCCAACCAACGTGCAACAAAGAT...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACATGTCTTGGTTGATATaGTTCATGCCTTCTTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVCVYVQDMSWLI*FMPSST Trigger: TGTCGAAGAAGGCATGAACCATATCAACCAAGACAT...GTCTTGCACATACACACACACACACACACACACACACACACACACACACACACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110098.4 |
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| CDS-3UTR CCA 90 bp | AGAAAGGATTGTGGCAGTAGCTCTGTGGAATGTCACAGTTTTACAAGAACAATATCGATCTGGCGATTCTaGGTGTCAATCTCATTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKDCGSSSVECHSFTRTISIWRF*VSISLP Trigger: GGGCAATGAGATTGACACCCAGAATCGCCAGATCGA...TATTGTTCTTGTAAAACTGTGACATTCCACAGAGCTACTGCCACAATCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| CDS-3UTR CCA 90 bp | AGAAAGGATTGTGGCAGTAGCTCTGTGGAATGTCACAGTTTTACAAGAACAATATGGCTTCATCAATTCTaGTTTTGTTGGAATCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKDCGSSSVECHSFTRTIWLHQF*FCWNQP Trigger: AGGCTGATTCCAACAAAACCAGAATTGATGAAGCCA...TATTGTTCTTGTAAAACTGTGACATTCCACAGAGCTACTGCCACAATCCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
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| CDS GCA 90 bp | GCATCATTTGTTACCCTGCGGATGAAGCCACCACTGATGGCCATCTaGTCCCGTTCATCCACCACACGGGCAGGCTGGCTGGCCACTACT | + |
|
Preference number: 5 (lower is better) Translates to: ASFVTLRMKPPLMAI*SRSSTTRAGWLATT Trigger: AGTAGTGGCCAGCCAGCCTGCCCGTGTGGTGGATGAACGGGAGCAGATGGCCATCAGTGGTGGCTTCATCCGCAGGGTAACAAATGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS GCA 90 bp | ATGTCTAGAGCCATATGGCGGAGGTTTCCGATGATGCCGCTCACCTaGTCCAGGTTCTCATCCATCTCATTTTCCCGGGCATCATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MSRAIWRRFPMMPLT*SRFSSISFSRASFV Trigger: AACAAATGATGCCCGGGAAAATGAGATGGATGAGAACCTGGAGCAGGTGAGCGGCATCATCGGAAACCTCCGCCATATGGCTCTAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS CCA 90 bp | TTGTTGGAATCAGCCTTCTCCATGATCCTGTCGATCTGGCGATTCTaGGTGTCAATCTCATTGCCCATGTCTAGAGCCATATGGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLESAFSMILSIWRF*VSISLPMSRAIWRR Trigger: CCTCCGCCATATGGCTCTAGACATGGGCAATGAGATTGACACCCAGAATCGCCAGATCGACAGGATCATGGAGAAGGCTGATTCCAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTATCTCCTCCAGCTCATaGCGCATGTCTGCGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVCVCARPISSSS*RMSASS Trigger: CGAAGACGCAGACATGCGCAATGAGCTGGAGGAGAT...AGGTCTTGCACATACACACACACACACACACACACACACACACACACACACACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCACTTCCCAGCATCTTaGTTGCACGTTGGTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVCVYVQDHFPAS*LHVGWL Trigger: AAGCCAACCAACGTGCAACAAAGATGCTGGGAAGTG...GTCTTGCACATACACACACACACACACACACACACACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTGGCCTCCTTCATGTCTaGGTTGATATGGTTCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGGLLHV*VDMVHA Trigger: GGCATGAACCATATCAACCAAGACATGAAGGAGGCC...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACTTCCCAGCATCTTTGTaGCACGTTGGTTGGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVCVYVQDFPASL*HVGWLH Trigger: ATGAAGCCAACCAACGTGCAACAAAGATGCTGGGAA...GTCTTGCACATACACACACACACACACACACACACACACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTTTCCCAGCATCTTTGTaGCACGTTGGTTGGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVCVCARPFPASL*HVGWLH Trigger: ATGAAGCCAACCAACGTGCAACAAAGATGCTGGGAA...AGGTCTTGCACATACACACACACACACACACACACACACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTTTCCAGTTGTTCGCCTaGCTCATCCAACATAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGFQLFA*LIQHNQ Trigger: TTGGTTATGTTGGATGAGCAAGGCGAACAACTGGAA...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
||
| CDS-3UTR CAA 90 bp | AGAGCACACAGGACATTTACAATGGGGGTGACTGACTCTGTGTGTGTGTGTGTGTTTGTTGCACGTTGGTaGGCTTCATCAATTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RAHRTFTMGVTDSVCVCVFVARW*ASSILV Trigger: AACCAGAATTGATGAAGCCAACCAACGTGCAACAAA...CACACACACACACACAGAGTCAGTCACCCCCATTGTAAATGTCCTGTGTGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTAATCACTTCCCAGCATCTTaGTTGCACGTTGGTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVYVQDLLGNHFPAS*LHVGWL Trigger: AAGCCAACCAACGTGCAACAAAGATGCTGGGAAGTG...ATTACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTTCATCAATTCTGGTTTaGTTGGAATCAGCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVYVQDLLGSSILV*LESAFS Trigger: GGAGAAGGCTGATTCCAACAAAACCAGAATTGATGA...ACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTATCATCAATTCTGGTTTaGTTGGAATCAGCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLSSILV*LESAFS Trigger: GGAGAAGGCTGATTCCAACAAAACCAGAATTGATGA...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACTTTGTTGCACGTTGGTaGGCTTCATCAATTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVCVYVQDFVARW*ASSILV Trigger: AACCAGAATTGATGAAGCCAACCAACGTGCAACAAA...GTCTTGCACATACACACACACACACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CAA 90 bp | AAGCATGAAGGAGCTCTCTTGTCCAACAACATTTGGAGGAGAGCACAGCAGAAGCATCTTTGTTGCACGTaGGTTGGCTTCATCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KHEGALLSNNIWRRAQQKHLCCT*VGFINS Trigger: AGAATTGATGAAGCCAACCAACGTGCAACAAAGATG...CTTCTGCTGTGCTCTCCTCCAAATGTTGTTGGACAAGAGAGCTCCTTCATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTCATCTTTGTTGCACGTaGGTTGGCTTCATCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVCVCARPHLCCT*VGFINS Trigger: AGAATTGATGAAGCCAACCAACGTGCAACAAAGATG...AGGTCTTGCACATACACACACACACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTATCCTTCATGTCTTGGTaGATATGGTTCATGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVCVYVQDLSFMSW*IWFMPS Trigger: AGAAGGCATGAACCATATCAACCAAGACATGAAGGA...TAGGTCTTGCACATACACACACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110098.4 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCAAGACCTACTAGGTAATTCACTGGATTTAAGCTaGTTACAGGGACACACACAA | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVYVQDLLGNSLDLS*LQGHTQ Trigger: TTGTGTGTGTCCCTGTAACAAGCTTAAATCCAGTGA...ATTACCTAGTAGGTCTTGCACATACACACACACACACACACACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028727.11 |
||
| CDS GCA 72 bp | GTTACCCTGCGGATGAAGCCACCACTGATGGCCATCTaGTCCCGTTCATCCACCACACGGGCAGGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTLRMKPPLMAI*SRSSTTRAGWL Trigger: CAGCCAGCCTGCCCGTGTGGTGGATGAACGGGAGCAGATGGCCATCAGTGGTGGCTTCATCCGCAGGGTAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS CCA 72 bp | TCTGCTCCCGTTCATCCACCACACGGGCAGGCTGGCTaGCCACTACTCCATCCTGATTATTGCCCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAPVHPPHGQAG*PLLHPDYCPRL Trigger: AAGCCTGGGGCAATAATCAGGATGGAGTAGTGGCCAGCCAGCCTGCCCGTGTGGTGGATGAACGGGAGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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| CDS GCA 72 bp | CTTTACTCTCTTCAACCAGCTGCAGCATGCGACGGGTaGTTTCCAGGGACTCATCAGCCAGCTGGTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LYSLQPAAACDG*FPGTHQPAGQP Trigger: GGGCTGACCAGCTGGCTGATGAGTCCCTGGAAAGCACCCGTCGCATGCTGCAGCTGGTTGAAGAGAGTAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS GCA 72 bp | GCCATATGGCGGAGGTTTCCGATGATGCCGCTCACCTaGTCCAGGTTCTCATCCATCTCATTTTCCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AIWRRFPMMPLT*SRFSSISFSRA Trigger: TGCCCGGGAAAATGAGATGGATGAGAACCTGGAGCAGGTGAGCGGCATCATCGGAAACCTCCGCCATATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS TCA 72 bp | TGCCCATGTCTAGAGCCATATGGCGGAGGTTTCCGATaGTGCCGCTCACCTGCTCCAGGTTCTCATCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: CPCLEPYGGGFR*CRSPAPGSHPS Trigger: AGATGGATGAGAACCTGGAGCAGGTGAGCGGCATCATCGGAAACCTCCGCCATATGGCTCTAGACATGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS GCA 72 bp | TGCCAGCATCTTTACTCTCTTCAACCAGCTGCAGCATaGGACGGGTGCTTTCCAGGGACTCATCAGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CQHLYSLQPAAA*DGCFPGTHQPA Trigger: AGCTGGCTGATGAGTCCCTGGAAAGCACCCGTCGCATGCTGCAGCTGGTTGAAGAGAGTAAAGATGCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS CCA 72 bp | TGGGTGTCAATCTCATTGCCCATGTCTAGAGCCATATaGCGGAGGTTTCCGATGATGCCGCTCACCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WVSISLPMSRAI*RRFPMMPLTCS Trigger: GGAGCAGGTGAGCGGCATCATCGGAAACCTCCGCCATATGGCTCTAGACATGGGCAATGAGATTGACACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS GCA 72 bp | GTCCTGATGCCAGCATCTTTACTCTCTTCAACCAGCTaGAGCATGCGACGGGTGCTTTCCAGGGACTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: VLMPASLLSSTS*SMRRVLSRDSS Trigger: TGATGAGTCCCTGGAAAGCACCCGTCGCATGCTGCAGCTGGTTGAAGAGAGTAAAGATGCTGGCATCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS GCA 72 bp | TCCTGTCGATCTGGCGATTCTGGGTGTCAATCTCATTaGCCATGTCTAGAGCCATATGGCGGAGGTTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SCRSGDSGCQSH*PCLEPYGGGFR Trigger: TCGGAAACCTCCGCCATATGGCTCTAGACATGGGCAATGAGATTGACACCCAGAATCGCCAGATCGACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS CAA 72 bp | ATCCTGTCGATCTGGCGATTCTGGGTGTCAATCTCATaGCCCATGTCTAGAGCCATATGGCGGAGGTTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ILSIWRFWVSIS*PMSRAIWRRFP Trigger: CGGAAACCTCCGCCATATGGCTCTAGACATGGGCAATGAGATTGACACCCAGAATCGCCAGATCGACAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS CAA 90 bp | TTCTCCATGATCCTGTCGATCTGGCGATTCTGGGTGTCAATCTCATaGCCCATGTCTAGAGCCATATGGCGGAGGTTTCCGATGATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FSMILSIWRFWVSIS*PMSRAIWRRFPMMP Trigger: CGGCATCATCGGAAACCTCCGCCATATGGCTCTAGACATGGGCAATGAGATTGACACCCAGAATCGCCAGATCGACAGGATCATGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS CCA 72 bp | TCAGCCTTCTCCATGATCCTGTCGATCTGGCGATTCTaGGTGTCAATCTCATTGCCCATGTCTAGAGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: SAFSMILSIWRF*VSISLPMSRAI Trigger: TATGGCTCTAGACATGGGCAATGAGATTGACACCCAGAATCGCCAGATCGACAGGATCATGGAGAAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS CCA 72 bp | TTGTTGGAATCAGCCTTCTCCATGATCCTGTCGATCTaGCGATTCTGGGTGTCAATCTCATTGCCCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLESAFSMILSI*RFWVSISLPMS Trigger: AGACATGGGCAATGAGATTGACACCCAGAATCGCCAGATCGACAGGATCATGGAGAAGGCTGATTCCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
||
| CDS CAA 72 bp | TTTGTTGCACGTTGGTTGGCTTCATCAATTCTGGTTTaGTTGGAATCAGCCTTCTCCATGATCCTGTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: FVARWLASSILV*LESAFSMILSI Trigger: GATCGACAGGATCATGGAGAAGGCTGATTCCAACAAAACCAGAATTGATGAAGCCAACCAACGTGCAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028727.11 ENSMUST00000110098.4 |
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