Pregenerated sensors for SNAP23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027287Ensembl transcript IDs: ENSMUST00000028743.10, ENSMUST00000110711.9, ENSMUST00000116437.8, ENSMUST00000150611.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCATTTGTAATCCGGCTCGGTTGCTTAGATACTACATTGCTAGGTaGGTTGTCGCCACCATCTCCCCATGTTGCCTTATAGTTCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: TICNPARLLRYYIAR*VVATISPCCLIVLS Trigger: GGAAAGAACTATAAGGCAACATGGGGAGATGGTGGCGACAACTCACCTAGCAATGTAGTATCTAAGCAACCGAGCCGGATTACAAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR TCA 90 bp | ATATCCAGAGCCATGTTCTTTAGGTTGCCTAGGATGCTGCCCACTTaGGTCAGGTTCTCTTCCATCTCATCTTCTCTGGCATCATTAGTT | + |
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Preference number: 1 (lower is better) Translates to: ISRAMFFRLPRMLPT*VRFSSISSSLASLV Trigger: AACTAATGATGCCAGAGAAGATGAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGGCTCTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR TCA 90 bp | CACATGTGTGAAAGCTCCCACCCCAAGCACTCGTCTGTGTTTTTGTaGCCTGTAGTTTCTTTAATGAGTCAGCTTCATTTCCTATTCCTT | + |
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Preference number: 1 (lower is better) Translates to: HMCESSHPKHSSVFL*PVVSLMSQLHFLFL Trigger: AAGGAATAGGAAATGAAGCTGACTCATTAAAGAAACTACAGGTCACAAAAACACAGACGAGTGCTTGGGGTGGGAGCTTTCACACATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCCCTGCATGTGCAATATaGAACTGGATCCAAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: LRNLPASASRVLGLKVCAPACAI*NWIQEP Trigger: AGGTTCTTGGATCCAGTTTCATATTGCACATGCAGG...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR CAA 90 bp | CATCTCCCCATGTTGCCTTATAGTTCTTTCCAGACTCAAAGTTCTTaGTCCTTGGGCAGCAGGTTAGCAGCTCAGCCTGCACCTCAACAC | + |
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Preference number: 2 (lower is better) Translates to: HLPMLPYSSFQTQSS*SLGSRLAAQPAPQH Trigger: GTGTTGAGGTGCAGGCTGAGCTGCTAACCTGCTGCCCAAGGACAAAGAACTTTGAGTCTGGAAAGAACTATAAGGCAACATGGGGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCGTTTCCCCAAAACTTTaGGGAAATCTCCTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LRNLPASASRVLGLKVCAVSPKL*GNLLFH Trigger: ATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAAC...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR GCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCGAGGCATTCCTCCTCTaGTCCTTCTCACAGCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HTFTPASKSKGVLVHILTEAFLL*SFSQPF Trigger: GAAAGGCTGTGAGAAGGAGCAGAGGAGGAATGCCTC...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAGGTTGCCTAGGATGCTGCCCACTTGAGTCAGGTTCTCTTCCATCTCATCCTGCACCTCAACACTaGATCTCAAAGATCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SLGCLGCCPLESGSLPSHPAPQH*ISKIPL Trigger: CAAAGGGATCTTTGAGATGCAGTGTTGAGGTGCAGG...ATGAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGTTATACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTTGCTGAGGTACTACATTGCTAGGTaGGTTGTCGCCACCATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: ISYTFNVSTTGCSCSLLRYYIAR*VVATIS Trigger: GGAGATGGTGGCGACAACTCACCTAGCAATGTAGTA...CCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR CAA 90 bp | ATTAGTTATACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTaGCTGAGGCTGACCATTTGTAATCCGGCTCGGTTGCTTAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: ISYTFNVSTTGCSCS*LRLTICNPARLLRY Trigger: GTATCTAAGCAACCGAGCCGGATTACAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR-3UTR TCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCACTCTGAATAAGAAATaGCTCAGCGGAGCTAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HTFTPASKSKGVLVHILTTLNKK*LSGARE Trigger: TTCTCTAGCTCCGCTGAGTCATTTCTTATTCAGAGT...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR TCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCCAGCCTTTCAAACTCTaGATAAGAAATGACTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: HTFTPASKSKGVLVHILTQPFKL*IRNDSA Trigger: CGCTGAGTCATTTCTTATTCAGAGTTTGAAAGGCTG...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR GCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCAGCTACTTATACAGCTaGTTCTTTCATGGCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: HTFTPASKSKGVLVHILTSYLYS*FFHGSL Trigger: CAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCT...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGCCTACAATGGGACCATaGCATGACTCATTGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SFPKTLRKSPISCVCVCVPTMGP*HDSLCE Trigger: CTCACACAATGAGTCATGGCATGGTCCCATTGTAGG...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAACAGCTGCTTCTTTCATaGCTCTTTGGCAATGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VKLTSRKLIVFSFGAEAEQLLLS*LFGNAS Trigger: GGAAGCATTGCCAAAGAGCCATGAAAGAAGCAGCTG...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGCTTTGGAGCAGAAGCTaGAAAACAGTGATGCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SFPKTLRKSPISCVCVCVLWSRS*KTVMQN Trigger: GTTCTGCATCACTGTTTTTCAGCTTCTGCTCCAAAG...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR TCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCGTTTCCCCAAAACTTTaGGGAAATCTCCTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: HTFTPASKSKGVLVHILTVSPKL*GNLLFH Trigger: ATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAAC...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTAACAAAACACATGTGTaGAAGCTCCCACCCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KNLCIYVQITMGSEVKLTNKTHV*KLPPQA Trigger: TGCTTGGGGTGGGAGCTTTCACACATGTGTTTTGTT...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGATGGCTCTTTGGCAATaGTTCCAAATCTTGAACGCA | + |
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Preference number: 2 (lower is better) Translates to: SFPKTLRKSPISCVCVCVMALWQ*FQILNA Trigger: TGCGTTCAAGATTTGGAAGCATTGCCAAAGAGCCAT...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGAGAGACGGTGATGTATaGAAAGAAGCCTATGAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SFPKTLRKSPISCVCVCVRDGDV*KEAYES Trigger: ACTCTCATAGGCTTCTTTCCATACATCACCGTCTCT...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACCAGCCTTTCAAACTCTaGATAAGAAATGACTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: FKESTFRYSTIQCFGLSHQPFKL*IRNDSA Trigger: CGCTGAGTCATTTCTTATTCAGAGTTTGAAAGGCTG...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTACTCTGAATAAGAAATaGCTCAGCGGAGCTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLLENSLYSPLEQKLKNSTLNKK*LSGARE Trigger: TTCTCTAGCTCCGCTGAGTCATTTCTTATTCAGAGT...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR GCA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTATGGCTCTTTGGCAATaGTTCCAAATCTTGAACGCA | + |
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Preference number: 2 (lower is better) Translates to: SLLENSLYSPLEQKLKNSMALWQ*FQILNA Trigger: TGCGTTCAAGATTTGGAAGCATTGCCAAAGAGCCAT...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTATGGCTCTTTGGCAATaGTTCCAAATCTTGAACGCA | + |
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Preference number: 2 (lower is better) Translates to: KNLCIYVQITMGSEVKLTMALWQ*FQILNA Trigger: TGCGTTCAAGATTTGGAAGCATTGCCAAAGAGCCAT...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CCA 90 bp | AATAATGACAAAAGCTACTTATACAGCTGCTTCTTTCATGGCTCTTTGGCAATGAGAGACGGTGATGTATaGAAAGAAGCCTATGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: NNDKSYLYSCFFHGSLAMRDGDV*KEAYES Trigger: ACTCTCATAGGCTTCTTTCCATACATCACCGTCTCT...CATTGCCAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACTCTTTCATGGCTCTTTaGCAATGCTTCCAAATCTTG | + |
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Preference number: 2 (lower is better) Translates to: FKESTFRYSTIQCFGLSHSFMAL*QCFQIL Trigger: CAAGATTTGGAAGCATTGCCAAAGAGCCATGAAAGA...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTTCTTTCATGGCTCTTTaGCAATGCTTCCAAATCTTG | + |
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Preference number: 2 (lower is better) Translates to: KNLCIYVQITMGSEVKLTSFMAL*QCFQIL Trigger: CAAGATTTGGAAGCATTGCCAAAGAGCCATGAAAGA...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAGIKGV Trigger: CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCTCATTGTATTCTCCTTaGGAGCAGAAGCTGAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: LRNLPASASRVLGLKVCASLYSP*EQKLKN Trigger: GTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGA...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTTAGGTTGCCTAGGATGCTGCCCACTTGAGTCAGGTTCTCTTCCATCTCATCAAAGTTCTTTGTCCTaGGGCAGCAGGTTAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SLGCLGCCPLESGSLPSHQSSLS*GSRLAA Trigger: AGCTGCTAACCTGCTGCCCAAGGACAAAGAACTTTG...ATGAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR TCA 72 bp | AATCCGGCTCGGTTGCTTAGATACTACATTGCTAGGTaGGTTGTCGCCACCATCTCCCCATGTTGCCTTATA | + |
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Preference number: 3 (lower is better) Translates to: NPARLLRYYIAR*VVATISPCCLI Trigger: TATAAGGCAACATGGGGAGATGGTGGCGACAACTCACCTAGCAATGTAGTATCTAAGCAACCGAGCCGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTTAGGTTGCCTAGGATGCTGCCCACTTGAGTCAGGTTCTCTTCCATCTCATCACCATCTCCCCATGTaGCCTTATAGTTCTTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SLGCLGCCPLESGSLPSHHHLPM*PYSSFQ Trigger: CTGGAAAGAACTATAAGGCAACATGGGGAGATGGTG...ATGAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCCCATGCCATGACTCATaGTGTGAGAATAAAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: HTFTPASKSKGVLVHILTPCHDS*CENKRH Trigger: GTGCCTTTTATTCTCACACAATGAGTCATGGCATGG...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCAGGATCTACATAAACTaGATTCTGTGCATAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: HTFTPASKSKGVLVHILTRIYIN*ILCIRQ Trigger: CTGCCTTATGCACAGAATCAAGTTTATGTAGATCCT...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAGTTATACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTTGCTGAGGTGCTTAGATACTACATaGCTAGGTGAGTTGTCGCCA | + |
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Preference number: 3 (lower is better) Translates to: ISYTFNVSTTGCSCSLLRCLDTT*LGELSP Trigger: TGGCGACAACTCACCTAGCAATGTAGTATCTAAGCA...CCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR GCA 72 bp | CAACTTCATGAAGTTAACAGGCCTACAATGGGACCATaGCATGACTCATTGTGTGAGAATAAAAGGCACTCA | + |
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Preference number: 3 (lower is better) Translates to: QLHEVNRPTMGP*HDSLCENKRHS Trigger: TGAGTGCCTTTTATTCTCACACAATGAGTCATGGCATGGTCCCATTGTAGGCCTGTTAACTTCATGAAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAATTCTTTCATGGCTCTTaGGCAATGCTTCCAAATCTT | + |
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Preference number: 3 (lower is better) Translates to: VKLTSRKLIVFSFGAEAEFFHGS*AMLPNL Trigger: AAGATTTGGAAGCATTGCCAAAGAGCCATGAAAGAA...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR GCA 72 bp | ATCATTAGTTATACGTTTAATGTATCCACCACTGGCTaGTCCTGTAGTTTGCTGAGGCTGACCATTTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: IISYTFNVSTTG*SCSLLRLTICN Trigger: ATTACAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| 3UTR-3UTR CAA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACCTTCTAGAAAACTCATaGTATTCTCCTTTGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: FKESTFRYSTIQCFGLSHLLENS*YSPLEQ Trigger: CTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAG...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTTTCTTTCATGGCTCTTaGGCAATGCTTCCAAATCTT | + |
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Preference number: 3 (lower is better) Translates to: SLLENSLYSPLEQKLKNSFFHGS*AMLPNL Trigger: AAGATTTGGAAGCATTGCCAAAGAGCCATGAAAGAA...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTTTCTTTCATGGCTCTTaGGCAATGCTTCCAAATCTT | + |
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Preference number: 3 (lower is better) Translates to: KNLCIYVQITMGSEVKLTFFHGS*AMLPNL Trigger: AAGATTTGGAAGCATTGCCAAAGAGCCATGAAAGAA...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR TCA 72 bp | CCACACCTCTTAAATTCAGTATCTTTACCTGACAAATaGACCACTCTGACATGGAGTGCTTCTTTGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: PHLLNSVSLPDK*TTLTWSASLIF Trigger: AAAAATCAAAGAAGCACTCCATGTCAGAGTGGTTCATTTGTCAGGTAAAGATACTGAATTTAAGAGGTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTCAATGCTTCCAAATCTaGAACGCAAAAGAAGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KNLCIYVQITMGSEVKLTQCFQI*NAKEAK Trigger: TTTAGCTTCTTTTGCGTTCAAGATTTGGAAGCATTG...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTCAATGCTTCCAAATCTaGAACGCAAAAGAAGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLLENSLYSPLEQKLKNSQCFQI*NAKEAK Trigger: TTTAGCTTCTTTTGCGTTCAAGATTTGGAAGCATTG...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCTACTACATTGCTAGGTaGGTTGTCGCCACCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLKVCAYYIAR*VVATIS Trigger: GGAGATGGTGGCGACAACTCACCTAGCAATGTAGTA...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCTTGATTCCTGCATCCTaGGACTCAATGGCTAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLKVCALIPAS*DSMAKP Trigger: GGGTTTAGCCATTGAGTCTCAGGATGCAGGAATCAA...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCTGTCAGCCTTTTCTGTaGTCTTCTGTATTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLKVCACQPFL*SSVFAG Trigger: ACCAGCAAATACAGAAGATCACAGAAAAGGCTGACA...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCACCATCTCCCCATGTTaGCTTATAGTTCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLKVCATISPC*LIVLSR Trigger: TCTGGAAAGAACTATAAGGCAACATGGGGAGATGGT...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| 3UTR CAA 72 bp | ACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTaGCTGAGGCTGACCATTTGTAATCCGGCTCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFNVSTTGCSCS*LRLTICNPARL Trigger: CAACCGAGCCGGATTACAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCATCAATGAGTTTCTTTaGTCTTGTATTGGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLKVCAINEFL*SCIGNV Trigger: GACATTGCCAATACAAGAGCAAAGAAACTCATTGAT...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCTCTTTGCTCTTGTATTaGCAATGTCAATACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLKVCASLLLY*QCQYDS Trigger: AGAATCGTATTGACATTGCCAATACAAGAGCAAAGA...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| 3UTR CAA 72 bp | CCTTATAGTTCTTTCCAGACTCAAAGTTCTTTGTCCTaGGGCAGCAGGTTAGCAGCTCAGCCTGCACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PYSSFQTQSSLS*GSRLAAQPAPQ Trigger: TTGAGGTGCAGGCTGAGCTGCTAACCTGCTGCCCAAGGACAAAGAACTTTGAGTCTGGAAAGAACTATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
||
| 3UTR CAA 72 bp | CCATTTGTAATCCGGCTCGGTTGCTTAGATACTACATaGCTAGGTGAGTTGTCGCCACCATCTCCCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PFVIRLGCLDTT*LGELSPPSPHV Trigger: AACATGGGGAGATGGTGGCGACAACTCACCTAGCAATGTAGTATCTAAGCAACCGAGCCGGATTACAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
||
| CDS-3UTR GCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCCCATGTTCTTTAGGTTaGCTAGGATGCTGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HTFTPASKSKGVLVHILTPCSLG*LGCCPL Trigger: AAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGG...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAGGTTGCCTAGGATGCTaGCCACTTGAGTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKLTSRKLIVFSFGAEAEGCLGC*PLESGS Trigger: AGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACC...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGTTATACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTTGCTGAGGTTGATTCCTGCATCCTaGGACTCAATGGCTAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISYTFNVSTTGCSCSLLRLIPAS*DSMAKP Trigger: GGGTTTAGCCATTGAGTCTCAGGATGCAGGAATCAA...CCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
||
| CDS-3UTR GCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCTTTAGTTGTTCCCCTTaGTCATCCAGCATAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HTFTPASKSKGVLVHILTFSCSP*SSSIVM Trigger: CATCACTATGCTGGATGAGCAAGGGGAACAACTAAA...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACGGTTGCCTAGGATGCTaGCCACTTGAGTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKESTFRYSTIQCFGLSHGCLGC*PLESGS Trigger: AGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACC...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGTTAGGTTGCCTAGGATaGTGCCCACTTGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFPKTLRKSPISCVCVCVLGCLG*CPLESG Trigger: ACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAA...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAATTGATTCCTGCATCCTaGGACTCAATGGCTAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: VKLTSRKLIVFSFGAEAELIPAS*DSMAKP Trigger: GGGTTTAGCCATTGAGTCTCAGGATGCAGGAATCAA...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACTACTACATTGCTAGGTaGGTTGTCGCCACCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKESTFRYSTIQCFGLSHYYIAR*VVATIS Trigger: GGAGATGGTGGCGACAACTCACCTAGCAATGTAGTA...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AATAATGACAAAAGCTACTTATACAGCTGCTTCTTTCATGGCTCTTTGGCAATGGGTTGCCTAGGATGCTaGCCACTTGAGTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNDKSYLYSCFFHGSLAMGCLGC*PLESGS Trigger: AGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACC...CATTGCCAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGCCATGTTCTTTAGGTTaGCTAGGATGCTGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFPKTLRKSPISCVCVCVPCSLG*LGCCPL Trigger: AAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGG...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGTTATACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTTGCTGAGGTTTAGTTGTTCCCCTTaGTCATCCAGCATAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISYTFNVSTTGCSCSLLRFSCSP*SSSIVM Trigger: CATCACTATGCTGGATGAGCAAGGGGAACAACTAAA...CCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTTTAGGTTGCCTAGGATaGTGCCCACTTGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLCIYVQITMGSEVKLTLGCLG*CPLESG Trigger: ACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAA...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGTTATACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTTGCTGAGGCTACTGAGCCCGGCTTaGATGTTAGATCTATTACAA | + |
|
Preference number: 4 (lower is better) Translates to: ISYTFNVSTTGCSCSLLRLLSPA*MLDLLQ Trigger: TTGTAATAGATCTAACATCCAAGCCGGGCTCAGTAG...CCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
||
| CDS-3UTR TCA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAATGTCAGCCTTTTCTGTaGTCTTCTGTATTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKLTSRKLIVFSFGAEAECQPFL*SSVFAG Trigger: ACCAGCAAATACAGAAGATCACAGAAAAGGCTGACA...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGTTTAGTTGTTCCCCTTaGTCATCCAGCATAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFPKTLRKSPISCVCVCVFSCSP*SSSIVM Trigger: CATCACTATGCTGGATGAGCAAGGGGAACAACTAAA...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGGAGCATCAATTTCATTaGCCATATCCAGAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SFPKTLRKSPISCVCVCVEHQFH*PYPEPC Trigger: ACATGGCTCTGGATATGGGCAATGAAATTGATGCTC...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR CCA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCTCTTTGCTCTTGTATTaGCAATGTCAATACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTFTPASKSKGVLVHILTSLLLY*QCQYDS Trigger: AGAATCGTATTGACATTGCCAATACAAGAGCAAAGA...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTTATTACAAGGGCAGATaGAGAGGCCACAACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLCIYVQITMGSEVKLTYYKGR*RGHNTC Trigger: ACAAGTGTTGTGGCCTCTGCATCTGCCCTTGTAATA...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACACCATCTCCCCATGTTaGCTTATAGTTCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKESTFRYSTIQCFGLSHTISPC*LIVLSR Trigger: TCTGGAAAGAACTATAAGGCAACATGGGGAGATGGT...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTTGTCAGCCTTTTCTGTaGTCTTCTGTATTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLCIYVQITMGSEVKLTCQPFL*SSVFAG Trigger: ACCAGCAAATACAGAAGATCACAGAAAAGGCTGACA...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTGAAACAGTCACCAACTaGGAATCTATTACAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNLCIYVQITMGSEVKLTETVTN*ESITRA Trigger: TGCCCTTGTAATAGATTCTCAGTTGGTGACTGTTTC...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTTTTAGTTGTTCCCCTTaGTCATCCAGCATAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KNLCIYVQITMGSEVKLTFSCSP*SSSIVM Trigger: CATCACTATGCTGGATGAGCAAGGGGAACAACTAAA...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTACCATCTCCCCATGTTaGCTTATAGTTCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLENSLYSPLEQKLKNSTISPC*LIVLSR Trigger: TCTGGAAAGAACTATAAGGCAACATGGGGAGATGGT...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AATAATGACAAAAGCTACTTATACAGCTGCTTCTTTCATGGCTCTTTGGCAATGGAGCATCAATTTCATTaGCCATATCCAGAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NNDKSYLYSCFFHGSLAMEHQFH*PYPEPC Trigger: ACATGGCTCTGGATATGGGCAATGAAATTGATGCTC...CATTGCCAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTGAGCATCAATTTCATTaGCCATATCCAGAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLENSLYSPLEQKLKNSEHQFH*PYPEPC Trigger: ACATGGCTCTGGATATGGGCAATGAAATTGATGCTC...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAATCAATGAGTTTCTTTaGTCTTGTATTGGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKLTSRKLIVFSFGAEAEINEFL*SCIGNV Trigger: GACATTGCCAATACAAGAGCAAAGAAACTCATTGAT...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGATCAATGAGTTTCTTTaGTCTTGTATTGGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFPKTLRKSPISCVCVCVINEFL*SCIGNV Trigger: GACATTGCCAATACAAGAGCAAAGAAACTCATTGAT...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| 3UTR CAA 72 bp | AGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTaGGACTTAGCCACACCTCTTAAATTCAGTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKALLGTAQFSV*DLATPLKFSIF Trigger: AAAGATACTGAATTTAAGAGGTGTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTCAAAGTTCTTTGTCCTaGTTTCAAAGAAACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLENSLYSPLEQKLKNSQSSLS*FQRNSH Trigger: GTGACTGTTTCTTTGAAACCAGGACAAAGAACTTTG...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116437.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACCTATGTATATACGTACAAATCACTATGGGTTCAGAAGTGAAGCTCACTTCTTTGCTCTTGTATTaGCAATGTCAATACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNLCIYVQITMGSEVKLTSLLLY*QCQYDS Trigger: AGAATCGTATTGACATTGCCAATACAAGAGCAAAGA...AGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCTGCTTAGATACTACATaGCTAGGTGAGTTGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRNLPASASRVLGLKVCACLDTT*LGELSP Trigger: TGGCGACAACTCACCTAGCAATGTAGTATCTAAGCA...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCAGGCCACAACACTTGTaGAGTTCTGTTAAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRNLPASASRVLGLKVCARPQHL*SSVKVF Trigger: GAAGACTTTAACAGAACTCAACAAGTGTTGTGGCCT...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCTGTGATCTTCTGTATTaGCTGGTTTTGAGCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: LRNLPASASRVLGLKVCACDLLY*LVLSIN Trigger: ATTGATGCTCAAAACCAGCAAATACAGAAGATCACA...GGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCACATTGCTAGGTGAGTaGTCGCCACCATCTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: HTFTPASKSKGVLVHILTTLLGE*SPPSPH Trigger: ATGGGGAGATGGTGGCGACAACTCACCTAGCAATGT...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCGGCTGCTCCTGTAGTTaGCTGAGGCTGACCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: HTFTPASKSKGVLVHILTGCSCS*LRLTIC Trigger: ACAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCC...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCCACCATCTCCCCATGTaGCCTTATAGTTCTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: HTFTPASKSKGVLVHILTHHLPM*PYSSFQ Trigger: CTGGAAAGAACTATAAGGCAACATGGGGAGATGGTG...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAACATTGCTAGGTGAGTaGTCGCCACCATCTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: VKLTSRKLIVFSFGAEAETLLGE*SPPSPH Trigger: ATGGGGAGATGGTGGCGACAACTCACCTAGCAATGT...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCTGCTTAGATACTACATaGCTAGGTGAGTTGTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: HTFTPASKSKGVLVHILTCLDTT*LGELSP Trigger: TGGCGACAACTCACCTAGCAATGTAGTATCTAAGCA...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCAGGCCACAACACTTGTaGAGTTCTGTTAAAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: HTFTPASKSKGVLVHILTRPQHL*SSVKVF Trigger: GAAGACTTTAACAGAACTCAACAAGTGTTGTGGCCT...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACGGCTGCTCCTGTAGTTaGCTGAGGCTGACCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: FKESTFRYSTIQCFGLSHGCSCS*LRLTIC Trigger: ACAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCC...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGCACCATCTCCCCATGTaGCCTTATAGTTCTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SFPKTLRKSPISCVCVCVHHLPM*PYSSFQ Trigger: CTGGAAAGAACTATAAGGCAACATGGGGAGATGGTG...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | AATAATGACAAAAGCTACTTATACAGCTGCTTCTTTCATGGCTCTTTGGCAATGACATTGCTAGGTGAGTaGTCGCCACCATCTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: NNDKSYLYSCFFHGSLAMTLLGE*SPPSPH Trigger: ATGGGGAGATGGTGGCGACAACTCACCTAGCAATGT...CATTGCCAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTGGCTGCTCCTGTAGTTaGCTGAGGCTGACCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: SLLENSLYSPLEQKLKNSGCSCS*LRLTIC Trigger: ACAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCC...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | CATACATTCACACCAGCCAGCAAGAGCAAAGGGGTTTTGGTGCATATTCTAACCCAGACTCAAAGTTCTTaGTCCTGGTTTCAAAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: HTFTPASKSKGVLVHILTQTQSS*SWFQRN Trigger: GTTTCTTTGAAACCAGGACAAAGAACTTTGAGTCTG...GGTTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | ATTAGTTATACGTTTAATGTATCCACCACTGGCTGCTCCTGTAGTTTGCTGAGGAGGCCACAACACTTGTaGAGTTCTGTTAAAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISYTFNVSTTGCSCSLLRRPQHL*SSVKVF Trigger: GAAGACTTTAACAGAACTCAACAAGTGTTGTGGCCT...CCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150611.8 |
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| CDS-3UTR CAA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGCAGAGGCCACAACACTaGTTGAGTTCTGTTAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SFPKTLRKSPISCVCVCVQRPQH*LSSVKV Trigger: GACTTTAACAGAACTCAACAAGTGTTGTGGCCTCTG...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACCACCATCTCCCCATGTaGCCTTATAGTTCTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FKESTFRYSTIQCFGLSHHHLPM*PYSSFQ Trigger: CTGGAAAGAACTATAAGGCAACATGGGGAGATGGTG...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAATGCTTAGATACTACATaGCTAGGTGAGTTGTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: VKLTSRKLIVFSFGAEAECLDTT*LGELSP Trigger: TGGCGACAACTCACCTAGCAATGTAGTATCTAAGCA...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS TCA 90 bp | TTGTTGGTGTCAGCCTTTTCTGTGATCTTCTGTATTTGCTGGTTTTaGGCATCAATTTCATTGCCCATATCCAGAGCCATGTTCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: LLVSAFSVIFCICWF*ASISLPISRAMFFR Trigger: CCTAAAGAACATGGCTCTGGATATGGGCAATGAAATTGATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGACACCAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAACAGACTCAAAGTTCTTaGTCCTATTACAAGGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VKLTSRKLIVFSFGAEAEQTQSS*SYYKGR Trigger: TCTGCCCTTGTAATAGGACAAAGAACTTTGAGTCTG...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 |
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| CDS-3UTR CAA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAATCAATACGATTCTTGTaGGTGTCAGCCTTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: VKLTSRKLIVFSFGAEAESIRFL*VSAFSV Trigger: CACAGAAAAGGCTGACACCAACAAGAATCGTATTGA...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | AATAATGACAAAAGCTACTTATACAGCTGCTTCTTTCATGGCTCTTTGGCAATGCAGAGGCCACAACACTaGTTGAGTTCTGTTAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: NNDKSYLYSCFFHGSLAMQRPQH*LSSVKV Trigger: GACTTTAACAGAACTCAACAAGTGTTGTGGCCTCTG...CATTGCCAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACTCAATACGATTCTTGTaGGTGTCAGCCTTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: FKESTFRYSTIQCFGLSHSIRFL*VSAFSV Trigger: CACAGAAAAGGCTGACACCAACAAGAATCGTATTGA...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | AGTTTCCCCAAAACTTTGAGGAAATCTCCTATTTCATGTGTGTGTGTGTGTGTGATGTCAATACGATTCTaGTTGGTGTCAGCCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SFPKTLRKSPISCVCVCVMSIRF*LVSAFS Trigger: AGAAAAGGCTGACACCAACAAGAATCGTATTGACAT...CACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTCAGACTCAAAGTTCTTaGTCCTATTACAAGGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SLLENSLYSPLEQKLKNSQTQSS*SYYKGR Trigger: TCTGCCCTTGTAATAGGACAAAGAACTTTGAGTCTG...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 |
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| CDS-3UTR CAA 90 bp | GTGAAGCTCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAATGTGATCTTCTGTATTaGCTGGTTTTGAGCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: VKLTSRKLIVFSFGAEAECDLLY*LVLSIN Trigger: ATTGATGCTCAAAACCAGCAAATACAGAAGATCACA...TTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTTCAATACGATTCTTGTaGGTGTCAGCCTTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLLENSLYSPLEQKLKNSSIRFL*VSAFSV Trigger: CACAGAAAAGGCTGACACCAACAAGAATCGTATTGA...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TTTAAGGAAAGCACTTTTAGGTACAGCACAATTCAGTGTTTTGGACTTAGCCACATGTCAATACGATTCTaGTTGGTGTCAGCCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FKESTFRYSTIQCFGLSHMSIRF*LVSAFS Trigger: AGAAAAGGCTGACACCAACAAGAATCGTATTGACAT...GTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | TCACTTCTAGAAAACTCATTGTATTCTCCTTTGGAGCAGAAGCTGAAAAACAGTCTGTATTTGCTGGTTTaGAGCATCAATTTCATTGCC | + |
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Preference number: 5 (lower is better) Translates to: SLLENSLYSPLEQKLKNSLYLLV*SINFIA Trigger: GGCAATGAAATTGATGCTCAAAACCAGCAAATACAG...ACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS-3UTR CAA 90 bp | AATAATGACAAAAGCTACTTATACAGCTGCTTCTTTCATGGCTCTTTGGCAATGCTGTATTTGCTGGTTTaGAGCATCAATTTCATTGCC | + |
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Preference number: 5 (lower is better) Translates to: NNDKSYLYSCFFHGSLAMLYLLV*SINFIA Trigger: GGCAATGAAATTGATGCTCAAAACCAGCAAATACAG...CATTGCCAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS TCA 72 bp | GTTCTTTGTCCTGGTTTCAAAGAAACAGTCACCAACTaGGAATCTATTACAAGGGCAGATGCAGAGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: VLCPGFKETVTN*ESITRADAEAT Trigger: TGTGGCCTCTGCATCTGCCCTTGTAATAGATTCTCAGTTGGTGACTGTTTCTTTGAAACCAGGACAAAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116437.8 |
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| CDS TCA 72 bp | TCAGCCTTTTCTGTGATCTTCTGTATTTGCTGGTTTTaGGCATCAATTTCATTGCCCATATCCAGAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: SAFSVIFCICWF*ASISLPISRAM Trigger: CATGGCTCTGGATATGGGCAATGAAATTGATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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| CDS CAA 72 bp | CTTGTTGGTGTCAGCCTTTTCTGTGATCTTCTGTATTaGCTGGTTTTGAGCATCAATTTCATTGCCCATATC | + |
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Preference number: 6 (lower is better) Translates to: LVGVSLFCDLLY*LVLSINFIAHI Trigger: GATATGGGCAATGAAATTGATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGACACCAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028743.10 ENSMUST00000110711.9 ENSMUST00000116437.8 |
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