Pregenerated sensors for SMYD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018809Ensembl transcript IDs: ENSMUST00000044530.3
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTTCCATCAGAGGGCAGTTAGCTCTTGCAAGCAGCAGCCAGCATaGCAGGTGAGTGTCTCAATCTGTTTTCAAGTGCTCTCTGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: GFHQRAVSSCKQQPA*QVSVSICFQVLSVP Trigger: TGGCACAGAGAGCACTTGAAAACAGATTGAGACACTCACCTGCCATGCTGGCTGCTGCTTGCAAGAGCTAACTGCCCTCTGATGGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR CCA 90 bp | CCTTTAAAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATaGGGTTTCCATCAGAGGGCAGTTAGCTCTTGCAAGCAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: PLKQPLDTGFSLFWA*GFHQRAVSSCKQQP Trigger: TGGCTGCTGCTTGCAAGAGCTAACTGCCCTCTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTTTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR CCA 90 bp | GACAACCCTTTAAAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTaGGCATGGGGTTTCCATCAGAGGGCAGTTAGCTCTTGCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: DNPLKQPLDTGFSLF*AWGFHQRAVSSCKQ Trigger: CTGCTTGCAAGAGCTAACTGCCCTCTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTTTAAAGGGTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGAGCCAGCATGGCAGGTaGGTGTCTCAATCTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQSQHGR*VSQSVF Trigger: GAAAACAGATTGAGACACTCACCTGCCATGCTGGCT...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGCAATCTGTTTTCAAGTaGTCTCTGTGCCAGACACTA | + |
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Preference number: 2 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQQSVFK*SLCQTL Trigger: TAGTGTCTGGCACAGAGAGCACTTGAAAACAGATTG...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR TCA 72 bp | CAGTTAGCTCTTGCAAGCAGCAGCCAGCATGGCAGGTaGGTGTCTCAATCTGTTTTCAAGTGCTCTCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: QLALASSSQHGR*VSQSVFKCSLC Trigger: GCACAGAGAGCACTTGAAAACAGATTGAGACACTCACCTGCCATGCTGGCTGCTGCTTGCAAGAGCTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR TCA 72 bp | GGGATTAAAGGCGTGTGCCACCAAGCCCGGCTGCAGTaGCAACCCTTTAAAGCAGCCTTTAGATACTGGATT | + |
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Preference number: 3 (lower is better) Translates to: GIKGVCHQARLQ*QPFKAAFRYWI Trigger: AATCCAGTATCTAAAGGCTGCTTTAAAGGGTTGTCACTGCAGCCGGGCTTGGTGGCACACGCCTTTAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGCACCAGAGCTCCTTCTaGAGGGTGAGGATGATTGCT | + |
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Preference number: 3 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQHQSSF*RVRMIA Trigger: AGCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTG...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| 3UTR CCA 72 bp | CAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATaGGGTTTCCATCAGAGGGCAGTTAGCTCTTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: QPLDTGFSLFWA*GFHQRAVSSCK Trigger: CTTGCAAGAGCTAACTGCCCTCTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR TCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGGCACGCTGTCAGCTTTaGGTTGTCTGCACAGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLARCQL*VVCTVR Trigger: CCGCACTGTGCAGACAACTCAAAGCTGACAGCGTGC...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR TCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGTGGCGACAGTGCCAGTaGAGGACACACTGGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLWRQCQ*RTHWCW Trigger: CCAACACCAGTGTGTCCTTCACTGGCACTGTCGCCA...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGGGCATTGGTGAGAGCTaGAGGGATGGGTTCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLGIGES*RDGFWE Trigger: CTCCCAGAACCCATCCCTGCAGCTCTCACCAATGCC...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGGAACTCAGCCTCTGCTaGCTCTCAGCAACGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLELSLC*LSATPI Trigger: GATGGGCGTTGCTGAGAGGCAGCAGAGGCTGAGTTC...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGTTCCCATCTGGGAGCTaGAGCTGCTCTCAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLFPSGS*SCSQCL Trigger: GAGACACTGAGAGCAGCTGCAGCTCCCAGATGGGAA...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCCTGGCTGCAATACTTaGCATAGCTGCAGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLPGCNT*HSCSCH Trigger: GTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGAGGACACACTGGTGTTaGGCCTGCAGGAGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLRTHWC*ACRSGS Trigger: TGAACCACTCCTGCAGGCCCAACACCAGTGTGTCCT...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGAGAAGGCTTCCCATCTaGGAGCTGCAGCTGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLRRLPI*ELQLLS Trigger: TGAGAGCAGCTGCAGCTCCCAGATGGGAAGCCTTCT...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGGTTCGGAGAAGCTTCTaGGCCATGCAGACCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLVRRSF*AMQTCC Trigger: GCAACAGGTCTGCATGGCCCAGAAGCTTCTCCGAAC...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGATTCTCAGGGCAACATaGCAGAAGACCCCGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLILRAT*QKTPSV Trigger: CACACTCGGGGTCTTCTGCCATGTTGCCCTGAGAAT...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGATGGTAGAGGTCCCATaGCTGCTGCATACATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLMVEVP*LLHTFL Trigger: CAGGAATGTATGCAGCAGGCATGGGACCTCTACCAT...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCACCAGCAGTTCTCCTaGGAGAATGTCTTTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLHQQFS*ENVFCG Trigger: GCCACAAAAGACATTCTCCCAGGAGAACTGCTGGTG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGGCATACATTCCTGGCTaGAATACTTGGCATAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLAYIPG*NTWHSC Trigger: GCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGC...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCTTAGAGTACAGCACTaGAGCATCTGTGTACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLLRVQH*SICVLL Trigger: AAGGAGTACACAGATGCTGCAGTGCTGTACTCTAAG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR TCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCCCTCGAAGGCATTGGTaGGAGCTGCAGGGATGGGTT | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCPRRHW*ELQGWV Trigger: AACCCATCCCTGCAGCTCTCACCAATGCCTTCGAGG...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCTATGCTTTTCAGTATaGGGCAAAAGGCTGAAGATA | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLLCFSV*GKRLKI Trigger: TATCTTCAGCCTTTTGCCCCATACTGAAAAGCATAG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCTTCCCTAAGGTAGCATaGGCCTGGGCCAGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCFPKVA*AWARPS Trigger: AGATGGCCTGGCCCAGGCCCATGCTACCTTAGGGAA...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR TCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGGTGTGTGCATAAGCTaGCAGAGAGGGAGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQGVCIS*QRGRPQ Trigger: CTGGGGCCTCCCTCTCTGTCAGCTTATGCACACACC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR TCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCAGTGGTTCAGGAGGCTaGCAACAGGGAAGATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCSGSGG*QQGRCL Trigger: CAGGCATCTTCCCTGTTGTCAGCCTCCTGAACCACT...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR TCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCTACGGTGTGCTCTGCTaGCAAGAAGCTCTCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCYGVLC*QEALSS Trigger: GCTGCTGAGAGCTTCTTGTCAGCAGAGCACACCGTA...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGTATGTCTTTAAGACATaGTTCATACTGACCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLYVFKT*FILTQM Trigger: CATCTGGGTCAGTATGAAGCATGTCTTAAAGACATA...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGACTTGTGTAATCAAATaGCTTGACCAGATTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLTCVIK*LDQILA Trigger: AGCAAGAATCTGGTCAAGGCATTTGATTACACAAGT...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCCAGCCCTGGGGTCACTaGTTTCAGCTTAGGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCQPWGH*FQLRGL Trigger: AAGTCCCCTAAGCTGAAAGCAGTGACCCCAGGGCTG...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCAATCTCCTGTCCTTTTaGGATCCTCTGTGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCNLLSF*DPLCCP Trigger: CGGGCAGCACAGAGGATCGCAAAAGGACAGGAGATT...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGTCTGGGAGCTGCAGCTaGTCTCAGTGTCTCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQSGSCS*SQCLSV Trigger: CACGCTGAGACACTGAGAGCAGCTGCAGCTCCCAGA...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCAACATCTTCAAATCTaGCTAAAAGAGTCATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLQHLQI*LKESFS Trigger: TGAGAATGACTCTTTTAGCCAGATTTGAAGATGTTG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCATCTGCACACAGCCCTaGGGTCACTGCTTTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCICTQP*GHCFQL Trigger: AAGCTGAAAGCAGTGACCCCAGGGCTGTGTGCAGAT...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCAAGGTAGCATGGGCCTaGGCCAGGCCATCTTCAATT | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCKVAWA*ARPSSI Trigger: AATTGAAGATGGCCTGGCCCAGGCCCATGCTACCTT...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCCAACAGGATCCTTTCTaGCTTCCAGATGGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCQQDPF*LPDGTQ Trigger: CTGAGTGCCATCTGGAAGGCAGAAAGGATCCTGTTG...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCTGCCACAAGGTACTGTaGCCAAAGTGTGCTTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCCHKVL*PKCASD Trigger: GTCTGAAGCACACTTTGGCCACAGTACCTTGTGGCA...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCGCAACAACTGCTGAATaGCTTGCTCTGGTTTACCGG | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCATTAE*LALVYR Trigger: CCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGC...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCGGCCAATTTCAACACTaGATGGCCCATGGCGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCGQFQH*MAHGEF Trigger: AAACTCGCCATGGGCCATCCAGTGTTGAAATTGGCC...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGAGGTCCCATGCCTGCTaGATACATTCCTGGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQRSHAC*IHSWLQ Trigger: TTGCAGCCAGGAATGTATGCAGCAGGCATGGGACCT...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGAAGCTTCTGGGCCATaGAGACCTGTTGCTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQEASGP*RPVAEG Trigger: ACCTTCAGCAACAGGTCTGCATGGCCCAGAAGCTTC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGCTCTCAGGGCCACAGTaGACCAACAGGATCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQLSGPQ*TNRILS Trigger: AGAAAGGATCCTGTTGGTGCACTGTGGCCCTGAGAG...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCTACGCACCATCATCTTaGGCTGCAGTCTTTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCYAPSS*AAVFQD Trigger: ATCCTGAAAGACTGCAGCCCAAGATGATGGTGCGTA...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCGCAATGATGAGGTCGTaGCATTTCTCCTGGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCAMMRS*HFSWDK Trigger: CTTATCCCAGGAGAAATGCCACGACCTCATCATTGC...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR TCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCATTGGCATAGCACAGTaGAATGTCCTCAGTGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCIGIAQ*NVLSVR Trigger: CCTAACACTGAGGACATTTCACTGTGCTATGCCAAT...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGAGACATGCTTCATACTaGCCCAGATGGAAGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQRHASY*PRWKSA Trigger: AGCGCTCTTCCATCTGGGTCAGTATGAAGCATGTCT...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGCAGTCAAAGAAGTACTaGGAACTCAGCCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQQSKKY*ELSLCC Trigger: GCAGCAGAGGCTGAGTTCTCAGTACTTCTTTGACTG...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR GCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCCTGTGTTCTGGGCTATaGTTTTCAGTATGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCLCSGL*FSVWGK Trigger: TTTGCCCCATACTGAAAAGCATAGCCCAGAACACAG...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGTGGCAAGGCGTATCTaGCTGCTGTTGGTAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQVARRI*LLLVMM Trigger: CATCATTACCAACAGCAGGCAGATACGCCTTGCCAC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCAATTTCAACACTGGATaGCCCATGGCGAGTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCNFNTG*PMASFN Trigger: GTTGAAACTCGCCATGGGCCATCCAGTGTTGAAATT...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGTTTCTGCCTTCCAGATaGCACTCAGAGCTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQFLPSR*HSELQA Trigger: TGCCTGAAGCTCTGAGTGCCATCTGGAAGGCAGAAA...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGTGTTAGGCCTTGAATaGGACACTCCCTTAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQVLGLE*DTPLEY Trigger: GTACTCTAAGGGAGTGTCTCATTCAAGGCCTAACAC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGCAAGAGAACACTCTGTaGTATGGTAGAGGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQQENTL*YGRGPM Trigger: CATGGGACCTCTACCATAGCACAGAGTGTTCTCTTG...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGGGGTTCACCTATCTTaGTCTTCTCTTCACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQGVHLS*SSLHSL Trigger: GAGAGAGTGAAGAGAAGAGCAAGATAGGTGAACCCC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGTTTGTGGCAACTAGATaGCGGCCTTTCAAAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQFVATR*RPFKGC Trigger: ACACCCTTTGAAAGGCCGCCATCTAGTTGCCACAAA...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGGAGAATGTCTTTTGTaGCAACTAGATGGCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQGECLL*QLDGGL Trigger: AAGGCCGCCATCTAGTTGCCACAAAAGACATTCTCC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGCGAGTTTCAACCACCTaGAGACTCTTCTGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQRVSTT*RLFCTW Trigger: CCATGTACAGAAGAGTCTCCAGGTGGTTGAAACTCG...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGATCTCATCCTCAGGTTaGAGAAGGGAAGAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQISSSG*RREEEG Trigger: TCCTTCTTCTTCCCTTCTTCAACCTGAGGATGAGAT...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR TCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCTTCCATACTTTCCATTaGCATTGCATCCAGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCFHTFH*HCIQEL Trigger: CAATTCCTGGATGCAATGTCAATGGAAAGTATGGAA...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGTAGAAATTGTGTCCTaGACAGACTTCGGGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQVEIVS*TDFGSE Trigger: TTCACTCCCGAAGTCTGTGCAGGACACAATTTCTAC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGTCGCTCAAAGTCTCTaGTGTAGAAATTGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQVAQSL*CRNCVL Trigger: CAGGACACAATTTCTACAGCAGAGACTTTGAGCGAC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGATGGATGTTATTGCCTaGGCATTACACTGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQMDVIA*ALHCSC Trigger: ACAGCTGCAGTGTAATGCCCAGGCAATAACATCCAT...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGTGTAATCAAATGCCTTaGCCAGATTCTTGCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQCNQMP*PDSCFQ Trigger: CTGAAAGCAAGAATCTGGTCAAGGCATTTGATTACA...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR GCA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCATCTTTATTTTCAGATaGTGGACATTCCTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NRTSQSSPELLLEGEDDCIFIFR*WTFLCR Trigger: TCTGCAAAGGAATGTCCAGCATCTGAAAATAAAGAT...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGATGAATCTGTGTTCTaGGCTATGCTTTTCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQDESVF*AMLFSM Trigger: CATACTGAAAAGCATAGCCCAGAACACAGATTCATC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGGTGTACTCCTTTTCTTaGAATTTCCTGTTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQVYSFS*NFLFPS Trigger: AGAAGGAAACAGGAAATTCCAAGAAAAGGAGTACAC...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | CCGGCTCTCGTGAGGCCCATAGCAGTGCAGAATCTCCTGTCCTTTTaGGATCCTCTGTGCTGCCCGGACGGTGGCGACAGTGCCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PALVRPIAVQNLLSF*DPLCCPDGGDSASE Trigger: TTCACTGGCACTGTCGCCACCGTCCGGGCAGCACAGAGGATCGCAAAAGGACAGGAGATTCTGCACTGCTATGGGCCTCACGAGAGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS TCA 90 bp | CTGGGCCAGGCCATCTTCAATTTCCCCCAGTACGGTGTGCTCTGCTaGCAAGAAGCTCTCAGCAGCCTCCCGGCACCGCAACAACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGQAIFNFPQYGVLC*QEALSSLPAPQQLL Trigger: CAGCAGTTGTTGCGGTGCCGGGAGGCTGCTGAGAGCTTCTTGTCAGCAGAGCACACCGTACTGGGGGAAATTGAAGATGGCCTGGCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | GAGCGCTCTGCAAGTCTTACAACAGAAGGCTTCCCATCTGGGAGCTaGAGCTGCTCTCAGTGTCTCAGCGTGACAGGCCCCACAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERSASLTTEGFPSGS*SCSQCLSVTGPTAA Trigger: TGCCGCTGTGGGGCCTGTCACGCTGAGACACTGAGAGCAGCTGCAGCTCCCAGATGGGAAGCCTTCTGTTGTAAGACTTGCAGAGCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | GCGACAGTGCCAGTGAAGGACACACTGGTGTTGGGCCTGCAGGAGTaGTTCAGGAGGCTGACAACAGGGAAGATGCCTGTGGCAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ATVPVKDTLVLGLQE*FRRLTTGKMPVARR Trigger: ACGCCTTGCCACAGGCATCTTCCCTGTTGTCAGCCTCCTGAACCACTCCTGCAGGCCCAACACCAGTGTGTCCTTCACTGGCACTGTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS TCA 90 bp | GGTTTACCGGTTCGGAGAAGCTTCTGGGCCATGCAGACCTGTTGCTaGAGGTCCTGCAGGCGAGAGACTAGCTGGTCCCTGCTGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPVRRSFWAMQTCC*RSCRRETSWSLLTE Trigger: CTCTGTCAGCAGGGACCAGCTAGTCTCTCGCCTGCAGGACCTTCAGCAACAGGTCTGCATGGCCCAGAAGCTTCTCCGAACCGGTAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS TCA 90 bp | GCTGACAAGAAGCTCTCAGCAGCCTCCCGGCACCGCAACAACTGCTaGATGGCTTGCTCTGGTTTACCGGTTCGGAGAAGCTTCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ADKKLSAASRHRNNC*MACSGLPVRRSFWA Trigger: GGCCCAGAAGCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGCGGTGCCGGGAGGCTGCTGAGAGCTTCTTGTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | AGGCCCATAGCAGTGCAGAATCTCCTGTCCTTTTGCGATCCTCTGTaGTGCCCGGACGGTGGCGACAGTGCCAGTGAAGGACACACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPIAVQNLLSFCDPL*CPDGGDSASEGHTG Trigger: ACCAGTGTGTCCTTCACTGGCACTGTCGCCACCGTCCGGGCAGCACAGAGGATCGCAAAAGGACAGGAGATTCTGCACTGCTATGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | CTCAGCAGCCTCCCGGCACCGCAACAACTGCTGAATGGCTTGCTCTaGTTTACCGGTTCGGAGAAGCTTCTGGGCCATGCAGACCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSLPAPQQLLNGLL*FTGSEKLLGHADLL Trigger: CAACAGGTCTGCATGGCCCAGAAGCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGCGGTGCCGGGAGGCTGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGGAATCTCCTGTCCTTTaGCGATCCTCTGTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLESPVL*RSSVLP Trigger: GGGCAGCACAGAGGATCGCAAAAGGACAGGAGATTC...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | CCCATAGCAGTGCAGAATCTCCTGTCCTTTTGCGATCCTCTGTGCTaGCCGGACGGTGGCGACAGTGCCAGTGAAGGACACACTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PIAVQNLLSFCDPLC*PDGGDSASEGHTGV Trigger: AACACCAGTGTGTCCTTCACTGGCACTGTCGCCACCGTCCGGGCAGCACAGAGGATCGCAAAAGGACAGGAGATTCTGCACTGCTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | ACAAGAAGCTCTCAGCAGCCTCCCGGCACCGCAACAACTGCTGAATaGCTTGCTCTGGTTTACCGGTTCGGAGAAGCTTCTGGGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TRSSQQPPGTATTAE*LALVYRFGEASGPC Trigger: GCATGGCCCAGAAGCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGCGGTGCCGGGAGGCTGCTGAGAGCTTCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCTGGGAGAATGTCTTTaGTGGCAACTAGATGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLLGECL*WQLDGG Trigger: GCCGCCATCTAGTTGCCACAAAAGACATTCTCCCAG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCAACTGCTGAATGGCTaGCTCTGGTTTACCGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLQLLNG*LWFTGS Trigger: CGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | TCTGCAAGTCTTACAACAGAAGGCTTCCCATCTGGGAGCTGCAGCTaGTCTCAGTGTCTCAGCGTGACAGGCCCCACAGCGGCAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SASLTTEGFPSGSCS*SQCLSVTGPTAAVK Trigger: TTTGACTGCCGCTGTGGGGCCTGTCACGCTGAGACACTGAGAGCAGCTGCAGCTCCCAGATGGGAAGCCTTCTGTTGTAAGACTTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | GAATGGCTTGCTCTGGTTTACCGGTTCGGAGAAGCTTCTGGGCCATaGAGACCTGTTGCTGAAGGTCCTGCAGGCGAGAGACTAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EWLALVYRFGEASGP*RPVAEGPAGERLAG Trigger: ACCAGCTAGTCTCTCGCCTGCAGGACCTTCAGCAACAGGTCTGCATGGCCCAGAAGCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | ACATGGGCAGCAGACTTTAGCCAGTTCCCTAAGGTAGCATGGGCCTaGGCCAGGCCATCTTCAATTTCCCCCAGTACGGTGTGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TWAADFSQFPKVAWA*ARPSSISPSTVCSA Trigger: AGCAGAGCACACCGTACTGGGGGAAATTGAAGATGGCCTGGCCCAGGCCCATGCTACCTTAGGGAACTGGCTAAAGTCTGCTGCCCATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | TGGCTTGGCAGTGAGGCTGCTTTCGAGATCACTGATGGTCTGTCTTaGCTCCTGGAGTCTCCCCAGGTTCACCAGGCATTCTGTCTTACG | + |
|
Preference number: 5 (lower is better) Translates to: WLGSEAAFEITDGLS*LLESPQVHQAFCLT Trigger: CGTAAGACAGAATGCCTGGTGAACCTGGGGAGACTCCAGGAGGCAAGACAGACCATCAGTGATCTCGAAAGCAGCCTCACTGCCAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | TTCTGTACATGGGCAGCAGACTTTAGCCAGTTCCCTAAGGTAGCATaGGCCTGGGCCAGGCCATCTTCAATTTCCCCCAGTACGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCTWAADFSQFPKVA*AWARPSSISPSTVC Trigger: GCACACCGTACTGGGGGAAATTGAAGATGGCCTGGCCCAGGCCCATGCTACCTTAGGGAACTGGCTAAAGTCTGCTGCCCATGTACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | GATGGCCCATGGCGAGTTTCAACCACCTGGAGACTCTTCTGTACATaGGCAGCAGACTTTAGCCAGTTCCCTAAGGTAGCATGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DGPWRVSTTWRLFCT*AADFSQFPKVAWAW Trigger: CCAGGCCCATGCTACCTTAGGGAACTGGCTAAAGTCTGCTGCCCATGTACAGAAGAGTCTCCAGGTGGTTGAAACTCGCCATGGGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGCATCTCATCCTCAGGTaGAAGAAGGGAAGAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLHLILR*KKGRRR Trigger: CCTTCTTCTTCCCTTCTTCAACCTGAGGATGAGATG...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGGCCTTGACCAGATTCTaGCTTTCAGGTAAACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLALTRF*LSGKQV Trigger: CACCTGTTTACCTGAAAGCAAGAATCTGGTCAAGGC...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS GCA 90 bp | CTGTGCTATGGTAGAGGTCCCATGCCTGCTGCATACATTCCTGGCTaGAATACTTGGCATAGCTGCAGCTGCCACAAGGTACTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCYGRGPMPAAYIPG*NTWHSCSCHKVLWP Trigger: TGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGCAGCAGGCATGGGACCTCTACCATAGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | CCTGGCTGCAATACTTGGCATAGCTGCAGCTGCCACAAGGTACTGTaGCCAAAGTGTGCTTCAGACATCGGTGACAGTAGAGGTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGCNTWHSCSCHKVL*PKCASDIGDSRGLH Trigger: GTGGAGACCTCTACTGTCACCGATGTCTGAAGCACACTTTGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
||
| CDS CCA 90 bp | GGTAGAGGTCCCATGCCTGCTGCATACATTCCTGGCTGCAATACTTaGCATAGCTGCAGCTGCCACAAGGTACTGTGGCCAAAGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRGPMPAAYIPGCNT*HSCSCHKVLWPKCA Trigger: AGCACACTTTGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGCAGCAGGCATGGGACCTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | CTCTCTGTGCCAGACACTAGGCTCAGGTCAGGTGGGAAGGTCCCGTCCTCTCTGTACTTTCCATTGACATaGCATCCAGGAATTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVPDTRLRSGGKVPSSLYFPLT*HPGIGG Trigger: ACCCCCAATTCCTGGATGCAATGTCAATGGAAAGTA...CAGAGAGGACGGGACCTTCCCACCTGACCTGAGCCTAGTGTCTGGCACAGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCGGCCATGCAGACCTGTaGCTGAAGGTCCTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NRTSQSSPELLLEGEDDCGHADL*LKVLQA Trigger: CGCCTGCAGGACCTTCAGCAACAGGTCTGCATGGCC...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 90 bp | TCTGTGTGTTCTCTTCCCCCAGGGCTATATCCTCGAAGGCATTGGTaGGAGCTGCAGGGATGGGTTCTGGGAGAGTCTCCTTTTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVCSLPPGLYPRRHW*ELQGWVLGESPFLG Trigger: TCCAAGAAAAGGAGACTCTCCCAGAACCCATCCCTGCAGCTCTCACCAATGCCTTCGAGGATATAGCCCTGGGGGAAGAGAACACACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 90 bp | TTGTGGCAACTAGATGGCGGCCTTTCAAAGGGTGTGTGCATAAGCTaGCAGAGAGGGAGGCCCCAGAAATCTGTGTGTTCTCTTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWQLDGGLSKGVCIS*QRGRPQKSVCSLPP Trigger: TGGGGGAAGAGAACACACAGATTTCTGGGGCCTCCCTCTCTGTCAGCTTATGCACACACCCTTTGAAAGGCCGCCATCTAGTTGCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 90 bp | CCTGTTGCTGAAGGTCCTGCAGGCGAGAGACTAGCTGGTCCCTGCTaGCAGAGTTTGTGCAAGATTCGTTGCTACAGCTCAGCACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PVAEGPAGERLAGPC*QSLCKIRCYSSAHH Trigger: ATGATGTGCTGAGCTGTAGCAACGAATCTTGCACAAACTCTGTCAGCAGGGACCAGCTAGTCTCTCGCCTGCAGGACCTTCAGCAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 90 bp | CCTGCTGCATACATTCCTGGCTGCAATACTTGGCATAGCTGCAGCTaGCACAAGGTACTGTGGCCAAAGTGTGCTTCAGACATCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PAAYIPGCNTWHSCS*HKVLWPKCASDIGD Trigger: GTCACCGATGTCTGAAGCACACTTTGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGCAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 90 bp | CCCATGCCTGCTGCATACATTCCTGGCTGCAATACTTGGCATAGCTaGAGCTGCCACAAGGTACTGTGGCCAAAGTGTGCTTCAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: PMPAAYIPGCNTWHS*SCHKVLWPKCASDI Trigger: GATGTCTGAAGCACACTTTGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGCAGCAGGCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | TGGCCAATTTCAACACTGGATGGCCCATGGCGAGTTTCAACCACCTaGAGACTCTTCTGTACATGGGCAGCAGACTTTAGCCAGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WPISTLDGPWRVSTT*RLFCTWAADFSQFP Trigger: AGGGAACTGGCTAAAGTCTGCTGCCCATGTACAGAAGAGTCTCCAGGTGGTTGAAACTCGCCATGGGCCATCCAGTGTTGAAATTGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | GCCAGTTTGAAGAGCTCATGGCCAATTTCAACACTGGATGGCCCATaGCGAGTTTCAACCACCTGGAGACTCTTCTGTACATGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLKSSWPISTLDGP*RVSTTWRLFCTWAA Trigger: TGCTGCCCATGTACAGAAGAGTCTCCAGGTGGTTGAAACTCGCCATGGGCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 90 bp | CCCAGGTTCACCAGGCATTCTGTCTTACGCACCATCATCTTGGGCTaGAGTCTTTCAGGATACCCATGCATACCTGCTTCCACTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRFTRHSVLRTIILG*SLSGYPCIPASTMS Trigger: AGACATAGTGGAAGCAGGTATGCATGGGTATCCTGAAAGACTGCAGCCCAAGATGATGGTGCGTAAGACAGAATGCCTGGTGAACCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | CTGGACATTCCTTTGCAGAATCTGGTAAGAGGAAAGCACCAGGGTTaGCTTGGCAGTGAGGCTGCTTTCGAGATCACTGATGGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDIPLQNLVRGKHQG*LGSEAAFEITDGLS Trigger: AGACAGACCATCAGTGATCTCGAAAGCAGCCTCACTGCCAAGCCAACCCTGGTGCTTTCCTCTTACCAGATTCTGCAAAGGAATGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | GACTTGGGCCAGTTTGAAGAGCTCATGGCCAATTTCAACACTGGATaGCCCATGGCGAGTTTCAACCACCTGGAGACTCTTCTGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: DLGQFEELMANFNTG*PMASFNHLETLLYM Trigger: CATGTACAGAAGAGTCTCCAGGTGGTTGAAACTCGCCATGGGCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | ACTGCCAACCCATTGAATAGGACTTGGGCCAGTTTGAAGAGCTCATaGCCAATTTCAACACTGGATGGCCCATGGCGAGTTTCAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: TANPLNRTWASLKSS*PISTLDGPWRVSTT Trigger: GGTGGTTGAAACTCGCCATGGGCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGGGTTGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | ATGGCACTCAGAGCTTCAGGCACTGCCAACCCATTGAATAGGACTTaGGCCAGTTTGAAGAGCTCATGGCCAATTTCAACACTGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: MALRASGTANPLNRT*ASLKSSWPISTLDG Trigger: GCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGGGTTGGCAGTGCCTGAAGCTCTGAGTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGAAGGACACACTGGTGTaGGGCCTGCAGGAGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQKDTLV*GLQEWF Trigger: GAACCACTCCTGCAGGCCCAACACCAGTGTGTCCTT...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 90 bp | CGTATCTGCCTGCTGTTGGTAATGATGCTCTCGTTAGACCCTGTGTaGCATATGGATGTTATTGCCTGGGCATTACACTGCAGCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RICLLLVMMLSLDPV*HMDVIAWALHCSCS Trigger: GCTACAGCTGCAGTGTAATGCCCAGGCAATAACATCCATATGTCACACAGGGTCTAACGAGAGCATCATTACCAACAGCAGGCAGATACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 90 bp | TTCAGGATACCCATGCATACCTGCTTCCACTATGTCTTTAAGACATaGTTCATACTGACCCAGATGGAAGAGCGCTGCAGAGCGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRIPMHTCFHYVFKT*FILTQMEERCRAIG Trigger: GCCAATCGCTCTGCAGCGCTCTTCCATCTGGGTCAGTATGAAGCATGTCTTAAAGACATAGTGGAAGCAGGTATGCATGGGTATCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCTTACGCACCATCATCTaGGGCTGCAGTCTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NRTSQSSPELLLEGEDDCLRTII*GCSLSG Trigger: TCCTGAAAGACTGCAGCCCAAGATGATGGTGCGTAA...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCCATTGCATCCAGGAATaGGGGGTTCACCTATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NRTSQSSPELLLEGEDDCHCIQE*GVHLSC Trigger: GCAAGATAGGTGAACCCCCAATTCCTGGATGCAATG...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGTGCACGCTGTCAGCTTaGAGTTGTCTGCACAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQCTLSA*SCLHSA Trigger: CGCACTGTGCAGACAACTCAAAGCTGACAGCGTGCA...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 90 bp | CACCATCATCTTGGGCTGCAGTCTTTCAGGATACCCATGCATACCTaGTTCCACTATGTCTTTAAGACATGCTTCATACTGACCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: HHHLGLQSFRIPMHT*FHYVFKTCFILTQM Trigger: CATCTGGGTCAGTATGAAGCATGTCTTAAAGACATAGTGGAAGCAGGTATGCATGGGTATCCTGAAAGACTGCAGCCCAAGATGATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | ATCCCACTTGTTCTCAAGGCAATGATGAGGTCGTGGCATTTCTCCTaGGATAAGGACACTTACAAAAGCATCTTCCTTCACCAGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPLVLKAMMRSWHFS*DKDTYKSIFLHQQF Trigger: GAACTGCTGGTGAAGGAAGATGCTTTTGTAAGTGTCCTTATCCCAGGAGAAATGCCACGACCTCATCATTGCCTTGAGAACAAGTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGAGGACTTGGGCCAGTTaGAAGAGCTCATGGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQRTWAS*KSSWPI Trigger: AATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCT...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 90 bp | GGTAACTCTGGTATCCCACTTGTTCTCAAGGCAATGATGAGGTCGTaGCATTTCTCCTGGGATAAGGACACTTACAAAAGCATCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNSGIPLVLKAMMRS*HFSWDKDTYKSIFL Trigger: AAGGAAGATGCTTTTGTAAGTGTCCTTATCCCAGGAGAAATGCCACGACCTCATCATTGCCTTGAGAACAAGTGGGATACCAGAGTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGCGTATCTGCCTGCTGTaGGTAATGATGCTCTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQRICLL*VMMLSL Trigger: TAACGAGAGCATCATTACCAACAGCAGGCAGATACG...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 90 bp | TGCTCTTCTCTTCACTCTCTCCCTGACTTGTGTAATCAAATGCCTTaGCCAGATTCTTGCTTTCAGGTAAACAGGTGTCTGTGCTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: CSSLHSLPDLCNQMP*PDSCFQVNRCLCYQ Trigger: TTGGTAGCACAGACACCTGTTTACCTGAAAGCAAGAATCTGGTCAAGGCATTTGATTACACAAGTCAGGGAGAGAGTGAAGAGAAGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AACAGAACATCTCAGTCATCACCAGAGCTCCTTCTTGAGGGTGAGGATGATTGCCTTCCATACTTTCCATaGACATTGCATCCAGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: NRTSQSSPELLLEGEDDCLPYFP*TLHPGI Trigger: AATTCCTGGATGCAATGTCAATGGAAAGTATGGAAG...GCAATCATCCTCACCCTCAAGAAGGAGCTCTGGTGATGACTGAGATGTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGCCTTTAGATACTGGATTTAGTCTTTTCTGGGCATGGGGTTTCCATCAGTGTGTACTCCTTTTCTaGGAATTTCCTGTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQPLDTGFSLFWAWGFHQCVLLF*EFPVSF Trigger: GAAGGAAACAGGAAATTCCAAGAAAAGGAGTACACA...CTGATGGAAACCCCATGCCCAGAAAAGACTAAATCCAGTATCTAAAGGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 72 bp | TCCTCTGTGCTGCCCGGACGGTGGCGACAGTGCCAGTaGAGGACACACTGGTGTTGGGCCTGCAGGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSVLPGRWRQCQ*RTHWCWACRSG Trigger: ACCACTCCTGCAGGCCCAACACCAGTGTGTCCTTCACTGGCACTGTCGCCACCGTCCGGGCAGCACAGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | CGGAGCTCCCGGACCTCCTCACTCTCAGGGCCACAGTaGACCAACAGGATCCTTTCTGCCTTCCAGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSSRTSSLSGPQ*TNRILSAFQMA Trigger: TGCCATCTGGAAGGCAGAAAGGATCCTGTTGGTGCACTGTGGCCCTGAGAGTGAGGAGGTCCGGGAGCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | CGTGAGGCCCATAGCAGTGCAGAATCTCCTGTCCTTTaGCGATCCTCTGTGCTGCCCGGACGGTGGCGACAG | + |
|
Preference number: 6 (lower is better) Translates to: REAHSSAESPVL*RSSVLPGRWRQ Trigger: CTGTCGCCACCGTCCGGGCAGCACAGAGGATCGCAAAAGGACAGGAGATTCTGCACTGCTATGGGCCTCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 72 bp | GTTCGGAGAAGCTTCTGGGCCATGCAGACCTGTTGCTaGAGGTCCTGCAGGCGAGAGACTAGCTGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRRSFWAMQTCC*RSCRRETSWSL Trigger: CAGGGACCAGCTAGTCTCTCGCCTGCAGGACCTTCAGCAACAGGTCTGCATGGCCCAGAAGCTTCTCCGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GTGCAGAATCTCCTGTCCTTTTGCGATCCTCTGTGCTaGCCGGACGGTGGCGACAGTGCCAGTGAAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: VQNLLSFCDPLC*PDGGDSASEGH Trigger: GTGTCCTTCACTGGCACTGTCGCCACCGTCCGGGCAGCACAGAGGATCGCAAAAGGACAGGAGATTCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GCAGTGCAGAATCTCCTGTCCTTTTGCGATCCTCTGTaGTGCCCGGACGGTGGCGACAGTGCCAGTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVQNLLSFCDPL*CPDGGDSASEG Trigger: TCCTTCACTGGCACTGTCGCCACCGTCCGGGCAGCACAGAGGATCGCAAAAGGACAGGAGATTCTGCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | CTTACAACAGAAGGCTTCCCATCTGGGAGCTGCAGCTaGTCTCAGTGTCTCAGCGTGACAGGCCCCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LTTEGFPSGSCS*SQCLSVTGPTA Trigger: CGCTGTGGGGCCTGTCACGCTGAGACACTGAGAGCAGCTGCAGCTCCCAGATGGGAAGCCTTCTGTTGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | AGCAGCCTCCCGGCACCGCAACAACTGCTGAATGGCTaGCTCTGGTTTACCGGTTCGGAGAAGCTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLPAPQQLLNG*LWFTGSEKLLG Trigger: GCCCAGAAGCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGCGGTGCCGGGAGGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 72 bp | AAGCTCTCAGCAGCCTCCCGGCACCGCAACAACTGCTaGATGGCTTGCTCTGGTTTACCGGTTCGGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLSAASRHRNNC*MACSGLPVRRS Trigger: GCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGCGGTGCCGGGAGGCTGCTGAGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 72 bp | GCCATCTTCAATTTCCCCCAGTACGGTGTGCTCTGCTaGCAAGAAGCTCTCAGCAGCCTCCCGGCACCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AIFNFPQYGVLC*QEALSSLPAPQ Trigger: TTGCGGTGCCGGGAGGCTGCTGAGAGCTTCTTGTCAGCAGAGCACACCGTACTGGGGGAAATTGAAGATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GCAAGTCTTACAACAGAAGGCTTCCCATCTGGGAGCTaGAGCTGCTCTCAGTGTCTCAGCGTGACAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLTTEGFPSGS*SCSQCLSVTGP Trigger: GGGGCCTGTCACGCTGAGACACTGAGAGCAGCTGCAGCTCCCAGATGGGAAGCCTTCTGTTGTAAGACTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GCTCTGGTTTACCGGTTCGGAGAAGCTTCTGGGCCATaGAGACCTGTTGCTGAAGGTCCTGCAGGCGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALVYRFGEASGP*RPVAEGPAGER Trigger: TCTCTCGCCTGCAGGACCTTCAGCAACAGGTCTGCATGGCCCAGAAGCTTCTCCGAACCGGTAAACCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CCAGTGAAGGACACACTGGTGTTGGGCCTGCAGGAGTaGTTCAGGAGGCTGACAACAGGGAAGATGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PVKDTLVLGLQE*FRRLTTGKMPV Trigger: CACAGGCATCTTCCCTGTTGTCAGCCTCCTGAACCACTCCTGCAGGCCCAACACCAGTGTGTCCTTCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CTCCCGGCACCGCAACAACTGCTGAATGGCTTGCTCTaGTTTACCGGTTCGGAGAAGCTTCTGGGCCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPAPQQLLNGLL*FTGSEKLLGHA Trigger: TGCATGGCCCAGAAGCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGCGGTGCCGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GTGTCGCAGCATGGCTGCTCCCCAAACAGTCAAATCTaGACACAGCCCTGGGGTCACTGCTTTCAGCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSQHGCSPNSQI*TQPWGHCFQLR Trigger: CCTAAGCTGAAAGCAGTGACCCCAGGGCTGTGTGCAGATTTGACTGTTTGGGGAGCAGCCATGCTGCGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | ACTCTCAGGGCCACAGTGCACCAACAGGATCCTTTCTaGCTTCCAGATGGCACTCAGAGCTTCAGGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLRATVHQQDPF*LPDGTQSFRHC Trigger: GCAGTGCCTGAAGCTCTGAGTGCCATCTGGAAGGCAGAAAGGATCCTGTTGGTGCACTGTGGCCCTGAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | TCTCAGCAGCCTCCCGGCACCGCAACAACTGCTGAATaGCTTGCTCTGGTTTACCGGTTCGGAGAAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SQQPPGTATTAE*LALVYRFGEAS Trigger: AGAAGCTTCTCCGAACCGGTAAACCAGAGCAAGCCATTCAGCAGTTGTTGCGGTGCCGGGAGGCTGCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | GCAGACTTTAGCCAGTTCCCTAAGGTAGCATGGGCCTaGGCCAGGCCATCTTCAATTTCCCCCAGTACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ADFSQFPKVAWA*ARPSSISPSTV Trigger: CACCGTACTGGGGGAAATTGAAGATGGCCTGGCCCAGGCCCATGCTACCTTAGGGAACTGGCTAAAGTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | TGGGCAGCAGACTTTAGCCAGTTCCCTAAGGTAGCATaGGCCTGGGCCAGGCCATCTTCAATTTCCCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WAADFSQFPKVA*AWARPSSISPS Trigger: ACTGGGGGAAATTGAAGATGGCCTGGCCCAGGCCCATGCTACCTTAGGGAACTGGCTAAAGTCTGCTGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | GTGTTCTCTTCCCCCAGGGCTATATCCTCGAAGGCATaGGTGAGAGCTGCAGGGATGGGTTCTGGGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VFSSPRAISSKA*VRAAGMGSGRV Trigger: GACTCTCCCAGAACCCATCCCTGCAGCTCTCACCAATGCCTTCGAGGATATAGCCCTGGGGGAAGAGAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CCCATGCCTGCTGCATACATTCCTGGCTGCAATACTTaGCATAGCTGCAGCTGCCACAAGGTACTGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PMPAAYIPGCNT*HSCSCHKVLWP Trigger: TGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGCAGCAGGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | GGGGACTTTAAGGTTTGGGCCTGCACGCTGTCAGCTTaGAGTTGTCTGCACAGTGCGGAGACACTGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: GDFKVWACTLSA*SCLHSAETLMA Trigger: TGCCATCAGTGTCTCCGCACTGTGCAGACAACTCAAAGCTGACAGCGTGCAGGCCCAAACCTTAAAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS TCA 72 bp | GAAGGTCCTGCAGGCGAGAGACTAGCTGGTCCCTGCTaGCAGAGTTTGTGCAAGATTCGTTGCTACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: EGPAGERLAGPC*QSLCKIRCYSS Trigger: TGAGCTGTAGCAACGAATCTTGCACAAACTCTGTCAGCAGGGACCAGCTAGTCTCTCGCCTGCAGGACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GGTAGAGGTCCCATGCCTGCTGCATACATTCCTGGCTaGAATACTTGGCATAGCTGCAGCTGCCACAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GRGPMPAAYIPG*NTWHSCSCHKV Trigger: TACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGCAGCAGGCATGGGACCTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GGCCTGCACGCTGTCAGCTTTGAGTTGTCTGCACAGTaGGGAGACACTGATGGCACAGATGAATCTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLHAVSFELSAQ*GDTDGTDESVF Trigger: GAACACAGATTCATCTGTGCCATCAGTGTCTCCGCACTGTGCAGACAACTCAAAGCTGACAGCGTGCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GCTGCATACATTCCTGGCTGCAATACTTGGCATAGCTaGAGCTGCCACAAGGTACTGTGGCCAAAGTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: AAYIPGCNTWHS*SCHKVLWPKCA Trigger: AGCACACTTTGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | CCCAAGAGAACACTCTGTGCTATGGTAGAGGTCCCATaGCTGCTGCATACATTCCTGGCTGCAATACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PKRTLCAMVEVP*LLHTFLAAILG Trigger: GCCAAGTATTGCAGCCAGGAATGTATGCAGCAGGCATGGGACCTCTACCATAGCACAGAGTGTTCTCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | CTGACAACAGGGAAGATGCCTGTGGCAAGGCGTATCTaGCTGCTGTTGGTAATGATGCTCTCGTTAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: LTTGKMPVARRI*LLLVMMLSLDP Trigger: AGGGTCTAACGAGAGCATCATTACCAACAGCAGGCAGATACGCCTTGCCACAGGCATCTTCCCTGTTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CCTTCACCAGCAGTTCTCCTGGGAGAATGTCTTTTGTaGCAACTAGATGGCGGCCTTTCAAAGGGTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PSPAVLLGECLL*QLDGGLSKGVC Trigger: GCACACACCCTTTGAAAGGCCGCCATCTAGTTGCCACAAAAGACATTCTCCCAGGAGAACTGCTGGTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | TCAACACTGGATGGCCCATGGCGAGTTTCAACCACCTaGAGACTCTTCTGTACATGGGCAGCAGACTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: STLDGPWRVSTT*RLFCTWAADFS Trigger: GCTAAAGTCTGCTGCCCATGTACAGAAGAGTCTCCAGGTGGTTGAAACTCGCCATGGGCCATCCAGTGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | CAGATGGCACTCAGAGCTTCAGGCACTGCCAACCCATaGAATAGGACTTGGGCCAGTTTGAAGAGCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: QMALRASGTANP*NRTWASLKSSW Trigger: CCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGGGTTGGCAGTGCCTGAAGCTCTGAGTGCCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 90 bp | AGTCTCCCCAGGTTCACCAGGCATTCTGTCTTACGCACCATCATCTaGGGCTGCAGTCTTTCAGGATACCCATGCATACCTGCTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SLPRFTRHSVLRTII*GCSLSGYPCIPAST Trigger: AGTGGAAGCAGGTATGCATGGGTATCCTGAAAGACTGCAGCCCAAGATGATGGTGCGTAAGACAGAATGCCTGGTGAACCTGGGGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 90 bp | CGAGAGACTAGCTGGTCCCTGCTGACAGAGTTTGTGCAAGATTCGTaGCTACAGCTCAGCACATCATTTCCCTGCATGAGCGCTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: RETSWSLLTEFVQDS*LQLSTSFPCMSALQ Trigger: TTGCAGAGCGCTCATGCAGGGAAATGATGTGCTGAGCTGTAGCAACGAATCTTGCACAAACTCTGTCAGCAGGGACCAGCTAGTCTCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 90 bp | AGAGCTTCAGGCACTGCCAACCCATTGAATAGGACTTGGGCCAGTTaGAAGAGCTCATGGCCAATTTCAACACTGGATGGCCCATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RASGTANPLNRTWAS*KSSWPISTLDGPWR Trigger: TCGCCATGGGCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGGGTTGGCAGTGCCTGAAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 90 bp | TTCAGCTTAGGGGACTTTAAGGTTTGGGCCTGCACGCTGTCAGCTTaGAGTTGTCTGCACAGTGCGGAGACACTGATGGCACAGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: FSLGDFKVWACTLSA*SCLHSAETLMAQMN Trigger: ATTCATCTGTGCCATCAGTGTCTCCGCACTGTGCAGACAACTCAAAGCTGACAGCGTGCAGGCCCAAACCTTAAAGTCCCCTAAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 90 bp | TCTGCCTTCCAGATGGCACTCAGAGCTTCAGGCACTGCCAACCCATaGAATAGGACTTGGGCCAGTTTGAAGAGCTCATGGCCAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: SAFQMALRASGTANP*NRTWASLKSSWPIS Trigger: TGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGGGTTGGCAGTGCCTGAAGCTCTGAGTGCCATCTGGAAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | ACCAGGCATTCTGTCTTACGCACCATCATCTTGGGCTaGAGTCTTTCAGGATACCCATGCATACCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TRHSVLRTIILG*SLSGYPCIPAS Trigger: GGAAGCAGGTATGCATGGGTATCCTGAAAGACTGCAGCCCAAGATGATGGTGCGTAAGACAGAATGCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | TACATTCCTGGCTGCAATACTTGGCATAGCTGCAGCTaGCACAAGGTACTGTGGCCAAAGTGTGCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: YIPGCNTWHSCS*HKVLWPKCASD Trigger: GTCTGAAGCACACTTTGGCCACAGTACCTTGTGGCAGCTGCAGCTATGCCAAGTATTGCAGCCAGGAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CCTTTGCAGAATCTGGTAAGAGGAAAGCACCAGGGTTaGCTTGGCAGTGAGGCTGCTTTCGAGATCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: PLQNLVRGKHQG*LGSEAAFEITD Trigger: ATCAGTGATCTCGAAAGCAGCCTCACTGCCAAGCCAACCCTGGTGCTTTCCTCTTACCAGATTCTGCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | TGGCGAGTTTCAACCACCTGGAGACTCTTCTGTACATaGGCAGCAGACTTTAGCCAGTTCCCTAAGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: WRVSTTWRLFCT*AADFSQFPKVA Trigger: TGCTACCTTAGGGAACTGGCTAAAGTCTGCTGCCCATGTACAGAAGAGTCTCCAGGTGGTTGAAACTCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | AGCTGGTCCCTGCTGACAGAGTTTGTGCAAGATTCGTaGCTACAGCTCAGCACATCATTTCCCTGCATGAGC | + |
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Preference number: 6 (lower is better) Translates to: SWSLLTEFVQDS*LQLSTSFPCMS Trigger: GCTCATGCAGGGAAATGATGTGCTGAGCTGTAGCAACGAATCTTGCACAAACTCTGTCAGCAGGGACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | GGCACTGCCAACCCATTGAATAGGACTTGGGCCAGTTaGAAGAGCTCATGGCCAATTTCAACACTGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: GTANPLNRTWAS*KSSWPISTLDG Trigger: GCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGGGTTGGCAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | AAGAGCTCATGGCCAATTTCAACACTGGATGGCCCATaGCGAGTTTCAACCACCTGGAGACTCTTCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: KSSWPISTLDGP*RVSTTWRLFCT Trigger: TGTACAGAAGAGTCTCCAGGTGGTTGAAACTCGCCATGGGCCATCCAGTGTTGAAATTGGCCATGAGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CAGTTTGAAGAGCTCATGGCCAATTTCAACACTGGATaGCCCATGGCGAGTTTCAACCACCTGGAGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: QFEELMANFNTG*PMASFNHLETL Trigger: AAGAGTCTCCAGGTGGTTGAAACTCGCCATGGGCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CCATTGAATAGGACTTGGGCCAGTTTGAAGAGCTCATaGCCAATTTCAACACTGGATGGCCCATGGCGAGTT | + |
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Preference number: 6 (lower is better) Translates to: PLNRTWASLKSS*PISTLDGPWRV Trigger: AACTCGCCATGGGCCATCCAGTGTTGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | AGGTTCACCAGGCATTCTGTCTTACGCACCATCATCTaGGGCTGCAGTCTTTCAGGATACCCATGCATACCT | + |
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Preference number: 6 (lower is better) Translates to: RFTRHSVLRTII*GCSLSGYPCIP Trigger: AGGTATGCATGGGTATCCTGAAAGACTGCAGCCCAAGATGATGGTGCGTAAGACAGAATGCCTGGTGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 90 bp | CAAAAGCATCTTCCTTCACCAGCAGTTCTCCTGGGAGAATGTCTTTaGTGGCAACTAGATGGCGGCCTTTCAAAGGGTGTGTGCATAAGC | + |
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Preference number: 6 (lower is better) Translates to: QKHLPSPAVLLGECL*WQLDGGLSKGVCIS Trigger: GCTTATGCACACACCCTTTGAAAGGCCGCCATCTAGTTGCCACAAAAGACATTCTCCCAGGAGAACTGCTGGTGAAGGAAGATGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | GGAAGAAGAAGGAAGGAAGATGTCGCTCAAAGTCTCTaGTGTAGAAATTGTGTCCTGCACAGACTTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: GRRRKEDVAQSL*CRNCVLHRLRE Trigger: CTCCCGAAGTCTGTGCAGGACACAATTTCTACAGCAGAGACTTTGAGCGACATCTTCCTTCCTTCTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | CCCATGCATACCTGCTTCCACTATGTCTTTAAGACATaGTTCATACTGACCCAGATGGAAGAGCGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PMHTCFHYVFKT*FILTQMEERCR Trigger: TCTGCAGCGCTCTTCCATCTGGGTCAGTATGAAGCATGTCTTAAAGACATAGTGGAAGCAGGTATGCATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | CTCGAAGGCATTGGTGAGAGCTGCAGGGATGGGTTCTaGGAGAGTCTCCTTTTCTTGGATCTTTATTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LEGIGESCRDGF*ESLLFLDLYFQ Trigger: CTGAAAATAAAGATCCAAGAAAAGGAGACTCTCCCAGAACCCATCCCTGCAGCTCTCACCAATGCCTTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | AGAGCTTCAGGCACTGCCAACCCATTGAATAGGACTTaGGCCAGTTTGAAGAGCTCATGGCCAATTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: RASGTANPLNRT*ASLKSSWPIST Trigger: TGTTGAAATTGGCCATGAGCTCTTCAAACTGGCCCAAGTCCTATTCAATGGGTTGGCAGTGCCTGAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | ATGTCGCTCAAAGTCTCTGCTGTAGAAATTGTGTCCTaGACAGACTTCGGGAGTGAAGCCCACTTCTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: MSLKVSAVEIVS*TDFGSEAHFLS Trigger: ACTTAAGAAGTGGGCTTCACTCCCGAAGTCTGTGCAGGACACAATTTCTACAGCAGAGACTTTGAGCGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS GCA 72 bp | CTTGGGCTGCAGTCTTTCAGGATACCCATGCATACCTaGTTCCACTATGTCTTTAAGACATGCTTCATACTG | + |
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Preference number: 6 (lower is better) Translates to: LGLQSFRIPMHT*FHYVFKTCFIL Trigger: CAGTATGAAGCATGTCTTAAAGACATAGTGGAAGCAGGTATGCATGGGTATCCTGAAAGACTGCAGCCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | GTTCTCAAGGCAATGATGAGGTCGTGGCATTTCTCCTaGGATAAGGACACTTACAAAAGCATCTTCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: VLKAMMRSWHFS*DKDTYKSIFLH Trigger: GTGAAGGAAGATGCTTTTGTAAGTGTCCTTATCCCAGGAGAAATGCCACGACCTCATCATTGCCTTGAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CCA 72 bp | ACTTCCATACTTTCCATTGACATTGCATCCAGGAATTaGGGGTTCACCTATCTTGCTCTTCTCTTCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: TSILSIDIASRN*GFTYLALLFTL Trigger: GAGAGTGAAGAGAAGAGCAAGATAGGTGAACCCCCAATTCCTGGATGCAATGTCAATGGAAAGTATGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 72 bp | TTCTTGGATCTTTATTTTCAGATGCTGGACATTCCTTaGCAGAATCTGGTAAGAGGAAAGCACCAGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: FLDLYFQMLDIP*QNLVRGKHQGW Trigger: CCAACCCTGGTGCTTTCCTCTTACCAGATTCTGCAAAGGAATGTCCAGCATCTGAAAATAAAGATCCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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| CDS CAA 90 bp | CGAGTAACTACTAGAAAGTTCCTTCAAAAACATCTCATCCTCAGGTaGAAGAAGGGAAGAAGAAGGAAGGAAGATGTCGCTCAAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RVTTRKFLQKHLILR*KKGRRRKEDVAQSL Trigger: GAGACTTTGAGCGACATCTTCCTTCCTTCTTCTTCCCTTCTTCAACCTGAGGATGAGATGTTTTTGAAGGAACTTTCTAGTAGTTACTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044530.3 |
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