Pregenerated sensors for SMYD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055067Ensembl transcript IDs: ENSMUST00000111134.2, ENSMUST00000128302.8, ENSMUST00000194237.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATaGCACCAGATGTTCGGCCGGTGGGCCCCAGCTTCTTGCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: AQGCASDTLHMSSFP*HQMFGRWAPASCCQ Trigger: CTGACAGCAAGAAGCTGGGGCCCACCGGCCGAACATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR TCA 90 bp | CTGTGGCTAGCAGAGACAGCACTGCCTAGGGGTGTGCTGGCTGGATaGCAGCTGGGCATGAGCAGAAGCATCCTTAGGAAAAGGTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LWLAETALPRGVLAG*QLGMSRSILRKRSW Trigger: CCAGGACCTTTTCCTAAGGATGCTTCTGCTCATGCCCAGCTGTCATCCAGCCAGCACACCCCTAGGCAGTGCTGTCTCTGCTAGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CCA 90 bp | TGCAATTTCCCTCCCTCCCTGCAGCCAAGTCTAACTGGGGGCCTGTaGTTTGCAGCCGTCTGGCTCTTGCTTAGAGGAAGTCAGGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: CNFPPSLQPSLTGGL*FAAVWLLLRGSQVW Trigger: CCAGACCTGACTTCCTCTAAGCAAGAGCCAGACGGCTGCAAACCACAGGCCCCCAGTTAGACTTGGCTGCAGGGAGGGAGGGAAATTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR TCA 90 bp | ACACACACACACACACACACACACACACACGGCCCTGACAAAGGCTaGGGCCTGGGACTGGGAAGCTGGTCCCTCTGGAATAGCAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTHGPDKG*GLGLGSWSLWNSRL Trigger: TAACCTGCTATTCCAGAGGGACCAGCTTCCCAGTCCCAGGCCTCAGCCTTTGTCAGGGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CCA 90 bp | GTCTCCATGGCAGGGGCGAGGAAATACAAACTGACAGCAGGGAGCTaGCTGGTCCTGGGGGTCTCACCATTTGCAAGCCCAGGATTAATT | + |
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Preference number: 1 (lower is better) Translates to: VSMAGARKYKLTAGS*LVLGVSPFASPGLI Trigger: AATTAATCCTGGGCTTGCAAATGGTGAGACCCCCAGGACCAGCCAGCTCCCTGCTGTCAGTTTGTATTTCCTCGCCCCTGCCATGGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR TCA 90 bp | CAGCACAGACCGCAGCAGTGGGCAACAGAACAGTGGGAAGAAATCTaGTGTCTCCATGGCAGGGGCGAGGAAATACAAACTGACAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: QHRPQQWATEQWEEI*CLHGRGEEIQTDSR Trigger: CCTGCTGTCAGTTTGTATTTCCTCGCCCCTGCCATGGAGACATCAGATTTCTTCCCACTGTTCTGTTGCCCACTGCTGCGGTCTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR GCA 90 bp | CCCCTTCAGGCTCTGACGACCATGTGTCATTCTGACAGTGTCTTCTaGCTCCCTCCCTTGGAGGCCACTATTTTGGAGTCTGCCTTCACA | + |
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Preference number: 1 (lower is better) Translates to: PLQALTTMCHSDSVF*LPPLEATILESAFT Trigger: TGTGAAGGCAGACTCCAAAATAGTGGCCTCCAAGGGAGGGAGGCAGAAGACACTGTCAGAATGACACATGGTCGTCAGAGCCTGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR GCA 90 bp | CTGTGTAAGCATCTGCCTGCATGTTATGTCTGTGCACCACGTGAGTaGCTGGAACCCTTGATGGTCAGAAGAGGGCATCAGAGGGCATCG | + |
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Preference number: 1 (lower is better) Translates to: LCKHLPACYVCAPRE*LEPLMVRRGHQRAS Trigger: CGATGCCCTCTGATGCCCTCTTCTGACCATCAAGGGTTCCAGGCACTCACGTGGTGCACAGACATAACATGCAGGCAGATGCTTACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR GCA 90 bp | AGCACACAAGAAGAGCAGCCGCCACCACAGGCATTAGCTGGCTACTaGCATCCCATGAAAGAGGAGAACAAGAACGGCACTGCTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: STQEEQPPPQALAGY*HPMKEENKNGTAHR Trigger: TCTGTGAGCAGTGCCGTTCTTGTTCTCCTCTTTCATGGGATGGCAGTAGCCAGCTAATGCCTGTGGTGGCGGCTGCTCTTCTTGTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR CCA 90 bp | AAAGGACAGCACACAAGAAGAGCAGCCGCCACCACAGGCATTAGCTaGCTACTGCCATCCCATGAAAGAGGAGAACAAGAACGGCACTGC | + |
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Preference number: 1 (lower is better) Translates to: KGQHTRRAAATTGIS*LLPSHERGEQERHC Trigger: GCAGTGCCGTTCTTGTTCTCCTCTTTCATGGGATGGCAGTAGCCAGCTAATGCCTGTGGTGGCGGCTGCTCTTCTTGTGTGCTGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR TCA 90 bp | GGCTTTCTTCCATCACTAGGTGAGTCCTCACCTCTGCACAGTGCCTaGTGCATCATGGGAGAGGAAGAAGAGAAGAGCTCGGCAGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: GFLPSLGESSPLHSA*CIMGEEEEKSSAGH Trigger: ATGACCTGCCGAGCTCTTCTCTTCTTCCTCTCCCATGATGCATCAGGCACTGTGCAGAGGTGAGGACTCACCTAGTGATGGAAGAAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
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| 3UTR GCA 90 bp | ATCTTGAGTGAAACCAGTGAGGCCAGAGGCAACATGGCACCTGACTaGAAGCCATATTACAGAGCCGTGCTAGCAGAAACGGCATGGCCA | + |
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Preference number: 1 (lower is better) Translates to: ILSETSEARGNMAPD*KPYYRAVLAETAWP Trigger: TGGCCATGCCGTTTCTGCTAGCACGGCTCTGTAATATGGCTTGCAGTCAGGTGCCATGTTGCCTCTGGCCTCACTGGTTTCACTCAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR GCA 90 bp | AGATGTTCGGCCGGTGGGCCCCAGCTTCTTGCTGTCAGCTTTCTTTaGTCTAACTTAAGGTATACCCCTTCAGGCTCTGACGACCATGTG | + |
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Preference number: 1 (lower is better) Translates to: RCSAGGPQLLAVSFL*SNLRYTPSGSDDHV Trigger: CACATGGTCGTCAGAGCCTGAAGGGGTATACCTTAAGTTAGAGCAAAGAAAGCTGACAGCAAGAAGCTGGGGCCCACCGGCCGAACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CCA 90 bp | AAACTGGGTCCACGCAGGGTGCCTTCATCCTCACACACTGTAAGTTaGCAGAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: KLGPRRVPSSSHTVS*QRGISKPIRFSLGG Trigger: GCCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTCTGCCAACTTACAGTGTGTGAGGATGAAGGCACCCTGCGTGGACCCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CCA 90 bp | TGCCGCTACAATGACCATGGATTAATGGGAAGGCTTCGTAGAGGCTaGGGCCGCAATCAATCCTCAGTCACTGGCGACACGGATTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: CRYNDHGLMGRLRRG*GRNQSSVTGDTDFK Trigger: TTTAAAATCCGTGTCGCCAGTGACTGAGGATTGATTGCGGCCCCAGCCTCTACGAAGCCTTCCCATTAATCCATGGTCATTGTAGCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR GCA 90 bp | AAACCTCCATTTCCCCCTCTCATATCCTACAGCAACATCCTTGTATaGATGCACTCACACACACACACACACACACACACACACACGGCC | + |
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Preference number: 1 (lower is better) Translates to: KPPFPPLISYSNILV*MHSHTHTHTHTHTA Trigger: GGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGCATGCATACAAGGATGTTGCTGTAGGATATGAGAGGGGGAAATGGAGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR TCA 90 bp | ATCAGACCTCAGAGGAAAGGGGCTTCCTTCCGTGACTGCTTGACATaGAGATTTCACGGTTTTCACAAGGTCCAGAACCCTCTCTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: IRPQRKGASFRDCLT*RFHGFHKVQNPLSD Trigger: ATCAGAGAGAGGGTTCTGGACCTTGTGAAAACCGTGAAATCTTCATGTCAAGCAGTCACGGAAGGAAGCCCCTTTCCTCTGAGGTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR TCA 90 bp | AACACTTGGGAGGTGGAAGCAGAATCAGTAGTTCAAAGTCACCCTTaGCCACATGGTGATTTCCAAGCCATCCTGGGCCACAGACCTTAT | + |
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Preference number: 1 (lower is better) Translates to: NTWEVEAESVVQSHP*PHGDFQAILGHRPY Trigger: ATAAGGTCTGTGGCCCAGGATGGCTTGGAAATCACCATGTGGTCAAGGGTGACTTTGAACTACTGATTCTGCTTCCACCTCCCAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGTGATCCATaGAGGCAGGAAAATAAATGGAGGCCAGAGTTCCTCAGTGACAAC | + |
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Preference number: 1 (lower is better) Translates to: RERERERERERNGDP*RQENKWRPEFLSDN Trigger: GTTGTCACTGAGGAACTCTGGCCTCCATTTATTTTCCTGCCTCCATGGATCACCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR TCA 90 bp | GAATTCTGCTTCTTCACAACAGACTCAGGACAGACAAAATCATCTTaGGTGAAACCAGTGAGGCCAGAGGCAACATGGCACCTGACTGCA | + |
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Preference number: 1 (lower is better) Translates to: EFCFFTTDSGQTKSS*VKPVRPEATWHLTA Trigger: TGCAGTCAGGTGCCATGTTGCCTCTGGCCTCACTGGTTTCACTCAAGATGATTTTGTCTGTCCTGAGTCTGTTGTGAAGAAGCAGAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR GCA 90 bp | AGCTGGCTACTGCCATCCCATGAAAGAGGAGAACAAGAACGGCACTaGTCACAGAGATTTCCAATAGCAGTCATAAGTCAAAGCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: SWLLPSHERGEQERH*SQRFPIAVISQSST Trigger: TGTGCTGCTTTGACTTATGACTGCTATTGGAAATCTCTGTGAGCAGTGCCGTTCTTGTTCTCCTCTTTCATGGGATGGCAGTAGCCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR TCA 90 bp | AGATGGTCATCAACACAAGAAGCAAGGGCTGTTGATGAGCTGGCATaGCGTCAGTTAAGTATGTTTGTGCCCCATCTGGCACATTTTCAC | + |
|
Preference number: 1 (lower is better) Translates to: RWSSTQEARAVDELA*RQLSMFVPHLAHFH Trigger: GTGAAAATGTGCCAGATGGGGCACAAACATACTTAACTGACGTCATGCCAGCTCATCAACAGCCCTTGCTTCTTGTGTTGATGACCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
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| 3UTR TCA 90 bp | GGTGGAAGCAGAATCAGTAGTTCAAAGTCACCCTTGACCACATGGTaGTTTCCAAGCCATCCTGGGCCACAGACCTTATCTCAAAATCAA | + |
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Preference number: 1 (lower is better) Translates to: GGSRISSSKSPLTTW*FPSHPGPQTLSQNQ Trigger: TTGATTTTGAGATAAGGTCTGTGGCCCAGGATGGCTTGGAAATCACCATGTGGTCAAGGGTGACTTTGAACTACTGATTCTGCTTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR CCA 90 bp | CTTAATCCAGGATCATCAGTGACTGATAAATTTCATTCAGAAAGCTaGCAAGCACGGCATCCTATCTACGAACTCTGCCCATGGGCCATG | + |
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Preference number: 1 (lower is better) Translates to: LNPGSSVTDKFHSES*QARHPIYELCPWAM Trigger: CATGGCCCATGGGCAGAGTTCGTAGATAGGATGCCGTGCTTGCCAGCTTTCTGAATGAAATTTATCAGTCACTGATGATCCTGGATTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR GCA 90 bp | TTCCTCCTCACACTCTTGGCATTCATGTGGCACGGCTATAAATTATaGCCGGCGTGTTCATTTTCAGTTCAAATGTGTTCTCATCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: FLLTLLAFMWHGYKL*PACSFSVQMCSHPR Trigger: TCTGGGATGAGAACACATTTGAACTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGAGTGTGAGGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR TCA 90 bp | GCCTGGGATTCCATTCTTCTTTTGGAAAGCTCCTGCTTCCAATGTTaGCATCTTAACCATCAAAACCACCTGAGAATAGGCAAAGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: AWDSILLLESSCFQC*HLNHQNHLRIGKAK Trigger: CTTGGCTTTGCCTATTCTCAGGTGGTTTTGATGGTTAAGATGTCAACATTGGAAGCAGGAGCTTTCCAAAAGAAGAATGGAATCCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR TCA 90 bp | TCTCTAGGAGGCGTGAAGACAAATCTCTTAATCCAGGATCATCAGTaGCTGATAAATTTCATTCAGAAAGCTGGCAAGCACGGCATCCTA | + |
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Preference number: 1 (lower is better) Translates to: SLGGVKTNLLIQDHQ*LINFIQKAGKHGIL Trigger: TAGGATGCCGTGCTTGCCAGCTTTCTGAATGAAATTTATCAGTCACTGATGATCCTGGATTAAGAGATTTGTCTTCACGCCTCCTAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CCA 90 bp | GTAAATATTAATAGACATAAACAAAACCTCTTACACCAGATATGGTaGTATAGGCGGCCTGGATTGCCAACACTTGGGAGGTGGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VNINRHKQNLLHQIW*YRRPGLPTLGRWKQ Trigger: CTGCTTCCACCTCCCAAGTGTTGGCAATCCAGGCCGCCTATACCACCATATCTGGTGTAAGAGGTTTTGTTTATGTCTATTAATATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR CCA 90 bp | AATGTCAGAGAATTCACCGATGGGCCCTGGAGTGTTCTAAGAATCTaGATTAGAATGGCAAATTATTCTAGTCTATTACCGGAAGTACAG | + |
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Preference number: 1 (lower is better) Translates to: NVREFTDGPWSVLRI*IRMANYSSLLPEVQ Trigger: CTGTACTTCCGGTAATAGACTAGAATAATTTGCCATTCTAATCCAGATTCTTAGAACACTCCAGGGCCCATCGGTGAATTCTCTGACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR GCA 90 bp | TACTATAAAGCCATTCATAATCGCCAAGGCTGCAGTTACTGTAGGTaGTTGCTAACATTTACCAAGTACATACAAATAACAGGCTATTAC | + |
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Preference number: 1 (lower is better) Translates to: YYKAIHNRQGCSYCR*LLTFTKYIQITGYY Trigger: GTAATAGCCTGTTATTTGTATGTACTTGGTAAATGTTAGCAAGCACCTACAGTAACTGCAGCCTTGGCGATTATGAATGGCTTTATAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CCA 90 bp | GCAAGTTCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTaGCCTTTGTGTGCACGTTTCCTGAAAACATCAGAATCATTTAAT | + |
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Preference number: 1 (lower is better) Translates to: ASSLSIHLVGHASFI*PLCARFLKTSESFN Trigger: ATTAAATGATTCTGATGTTTTCAGGAAACGTGCACACAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATGGCACCAGATGTTCGGCCGGTGGGCCCCAGCTTCTTGCTGTCAGCTTTCTCTGACAGTGTCTTCTaGCTCCCTCCCTTGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SMAPDVRPVGPSFLLSAFSDSVF*LPPLEA Trigger: GGCCTCCAAGGGAGGGAGGCAGAAGACACTGTCAGA...GAAAGCTGACAGCAAGAAGCTGGGGCCCACCGGCCGAACATCTGGTGCCATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR TCA 90 bp | CACACAAGAAGAGCAGCCGCCACCACAGGCATTAGCTGGCTACTGCCATCCCATCGAGGAAATACAAACTaGCAGCAGGGAGCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HTRRAAATTGISWLLPSHRGNTN*QQGAGW Trigger: CCAGCCAGCTCCCTGCTGTCAGTTTGTATTTCCTCG...ATGGGATGGCAGTAGCCAGCTAATGCCTGTGGTGGCGGCTGCTCTTCTTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR-3UTR TCA 90 bp | CACACAAGAAGAGCAGCCGCCACCACAGGCATTAGCTGGCTACTGCCATCCCATCAGTGGGAAGAAATCTaGTGTCTCCATGGCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: HTRRAAATTGISWLLPSHQWEEI*CLHGRG Trigger: GCCCCTGCCATGGAGACATCAGATTTCTTCCCACTG...ATGGGATGGCAGTAGCCAGCTAATGCCTGTGGTGGCGGCTGCTCTTCTTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAGTCACCCTTGACCACATGGTGATTTCCAAGCCATCCTGGGCCACAGACCTGACAGCAGGGAGCTaGCTGGTCCTGGGGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: FKVTLDHMVISKPSWATDLTAGS*LVLGVS Trigger: TGAGACCCCCAGGACCAGCCAGCTCCCTGCTGTCAG...GTCTGTGGCCCAGGATGGCTTGGAAATCACCATGTGGTCAAGGGTGACTTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR CAA 90 bp | CTGACGACCATGTGTCATTCTGACAGTGTCTTCTGCCTCCCTCCCTaGGAGGCCACTATTTTGGAGTCTGCCTTCACACCCTGTATCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTTMCHSDSVFCLPP*EATILESAFTPCIP Trigger: AGGGATACAGGGTGTGAAGGCAGACTCCAAAATAGTGGCCTCCAAGGGAGGGAGGCAGAAGACACTGTCAGAATGACACATGGTCGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CAA 90 bp | GTCAGAAGAGGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTaGCAGACGATTGTGAGCTGCCGTTCTAAGTGCTGGGGATTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VRRGHQRASYLLELE*QTIVSCRSKCWGLK Trigger: CTTCAATCCCCAGCACTTAGAACGGCAGCTCACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCCTCTTCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTAAAGGGGCTATGTCAAAGGACAGCACACAAGAAGAGCAGCCGCCACCACAAGTCCGTAGGACACTaGTTTCCAGGCACCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: HVKGLCQRTAHKKSSRHHKSVGH*FPGTIL Trigger: GAGGATGGTGCCTGGAAATCAGTGTCCTACGGACTT...GTGGTGGCGGCTGCTCTTCTTGTGTGCTGTCCTTTGACATAGCCCCTTTACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGCATTCATGTGGCACGGCTATAAATTATGCCCGGCGTGTTCATTTTCAGAGATCCACCTGCCTCTaGCTTTCAGGGGCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SWHSCGTAINYARRVHFQRSTCL*LSGAAW Trigger: CCAGGCAGCCCCTGAAAGGCAGAGGCAGGTGGATCT...CTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTTGCAGACGATTGTGCTCTTCAACAAAGTGTaGAGGGAAGGCAGACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RGHQRASYLLELELQTIVLFNKV*REGRQP Trigger: TGGCTGTCTGCCTTCCCTGCACACTTTGTTGAAGAG...CACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CAA 90 bp | TTGCAGACGATTGTGAGCTGCCGTTCTAAGTGCTGGGGATTGAAGTaGGGACCTCTGAAAGAGCAGCCAGTGCTCTTAACTGCTGAACCA | + |
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Preference number: 2 (lower is better) Translates to: LQTIVSCRSKCWGLK*GPLKEQPVLLTAEP Trigger: TGGTTCAGCAGTTAAGAGCACTGGCTGCTCTTTCAGAGGTCCCAACTTCAATCCCCAGCACTTAGAACGGCAGCTCACAATCGTCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGCATTCATGTGGCACGGCTATAAATTATGCCCGGCGTGTTCATTTTCAGTGGGTCCACGCAGGGTaGCTTCATCCTCACACACTG | + |
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Preference number: 2 (lower is better) Translates to: SWHSCGTAINYARRVHFQWVHAG*LHPHTL Trigger: CAGTGTGTGAGGATGAAGGCACCCTGCGTGGACCCA...CTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATGGCACCAGATTGGAGGCCACTATTTTaGAGTCTGCCTTCACACCCT | + |
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Preference number: 2 (lower is better) Translates to: SGVCIRHPTHVIVSMAPDWRPLF*SLPSHP Trigger: AGGGTGTGAAGGCAGACTCCAAAATAGTGGCCTCCA...ATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR CAA 90 bp | AAAACTGGGTCCACGCAGGGTGCCTTCATCCTCACACACTGTAAGTaGGCAGAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KTGSTQGAFILTHCK*AERDFKAHQIFSRR Trigger: CCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTCTGCCAACTTACAGTGTGTGAGGATGAAGGCACCCTGCGTGGACCCAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTTGCAGACGATTGTGCGTGACTGCTTGACATaGAGATTTCACGGTTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RGHQRASYLLELELQTIVRDCLT*RFHGFH Trigger: GTGAAAACCGTGAAATCTTCATGTCAAGCAGTCACG...CACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGGCGTGAAGACAAATCTTCATGGAGATCCACCTaGCTCTGCCTTTCAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: ERDFKAHQIFSRRREDKSSWRST*LCLSGA Trigger: AGCCCCTGAAAGGCAGAGGCAGGTGGATCTCCATGA...AGATTTGTCTTCACGCCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATGGCACCAGATCACGTAGTTATTCACTaGAGAGGAGTAAAGGCAACG | + |
|
Preference number: 2 (lower is better) Translates to: SGVCIRHPTHVIVSMAPDHVVIH*RGVKAT Trigger: CGTTGCCTTTACTCCTCTGCAGTGAATAACTACGTG...ATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 90 bp | AGAATTCTGCTTCTTCACAACAGACTCAGGACAGACAAAATCATCTaGAGTGAAACCAGTGAGGCCAGAGGCAACATGGCACCTGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: RILLLHNRLRTDKII*SETSEARGNMAPDC Trigger: GCAGTCAGGTGCCATGTTGCCTCTGGCCTCACTGGTTTCACTCAAGATGATTTTGTCTGTCCTGAGTCTGTTGTGAAGAAGCAGAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCTGACGTCAGACTTCTTTCCTCATTGTGAAACGGCCTTCAGATGCCCACTACAGACAAAATCATCTTaGGTGAAACCAGTGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HLTSDFFPHCETAFRCPLQTKSS*VKPVRP Trigger: TGGCCTCACTGGTTTCACTCAAGATGATTTTGTCTG...TAGTGGGCATCTGAAGGCCGTTTCACAATGAGGAAAGAAGTCTGACGTCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAAGTCACCCTTGACCACATGGTGATTTCCAAGCCATCCTGGGCCACAGACGAACAAGAACGGCACTaGTCACAGAGATTTCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: FKVTLDHMVISKPSWATDEQERH*SQRFPI Trigger: TATTGGAAATCTCTGTGAGCAGTGCCGTTCTTGTTC...GTCTGTGGCCCAGGATGGCTTGGAAATCACCATGTGGTCAAGGGTGACTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR-3UTR CCA 90 bp | ATACCGGAAGTGAGGGGACTCAGCAGGTTTGTCCAGGAACCATCATTTAAACACGTGCCTGATGCATCATaGGAGAGGAAGAAGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IPEVRGLSRFVQEPSFKHVPDAS*ERKKRR Trigger: TCTTCTCTTCTTCCTCTCCCATGATGCATCAGGCAC...GTGTTTAAATGATGGTTCCTGGACAAACCTGCTGAGTCCCCTCACTTCCGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCTGAACAGTCACAAAAACATGAGGCACAATCAATACCATTGGTCATCAGGCTGGCCTCGAACTCATaGAGATCCACCTGCCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CSEQSQKHEAQSIPLVIRLASNS*RSTCLC Trigger: GCAGAGGCAGGTGGATCTCCATGAGTTCGAGGCCAG...CCTGATGACCAATGGTATTGATTGTGCCTCATGTTTTTGTGACTGTTCAGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATGGCACCAGATCCTGTAACAGAGGAGTaGATTGTAGCCTACTATCTA | + |
|
Preference number: 2 (lower is better) Translates to: SGVCIRHPTHVIVSMAPDPVTEE*IVAYYL Trigger: TAGATAGTAGGCTACAATCCACTCCTCTGTTACAGG...ATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAATGTTTGCTTTGTATTAAAACTGGGTCCACGCAGGGTGCCTTCATCCTCAGACCATGTGTCATTCTaGCAGTGTCTTCTGCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LNVCFVLKLGPRRVPSSSDHVSF*QCLLPP Trigger: GGGAGGCAGAAGACACTGTCAGAATGACACATGGTC...TGAGGATGAAGGCACCCTGCGTGGACCCAGTTTTAATACAAAGCAAACATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATGGCACCAGATCCGAATGGACAGAACTaGAGGAAATTATACAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SGVCIRHPTHVIVSMAPDPNGQN*RKLYKE Trigger: CTCTTTGTATAATTTCCTCCAGTTCTGTCCATTCGG...ATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGCATTCATGTGGCACGGCTATAAATTATGCCCGGCGTGTTCATTTTCAGTCAGCTGCAGCCGAATaGACAGAACTGGAGGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: SWHSCGTAINYARRVHFQSAAAE*TELEEI Trigger: AATTTCCTCCAGTTCTGTCCATTCGGCTGCAGCTGA...CTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTTCATTTCCCCAGTGAGTTAAAGGGGGACAAACAATACAGCTTTCTCTTGAGCAGGCCAAGGGGTTaGGGAAGTGGAAAAGACAAC | + |
|
Preference number: 2 (lower is better) Translates to: VFHFPSELKGDKQYSFLLSRPRG*GSGKDN Trigger: GTTGTCTTTTCCACTTCCCCAACCCCTTGGCCTGCT...CAAGAGAAAGCTGTATTGTTTGTCCCCCTTTAACTCACTGGGGAAATGAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAATGTTTGCTTTGTATTAAAACTGGGTCCACGCAGGGTGCCTTCATCCTCACTTAGGAAAAGGTCCTaGAGCTCAGGGGTGTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LNVCFVLKLGPRRVPSSSLRKRS*SSGVCI Trigger: GATGCACACCCCTGAGCTCCAGGACCTTTTCCTAAG...TGAGGATGAAGGCACCCTGCGTGGACCCAGTTTTAATACAAAGCAAACATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGCATTCATGTGGCACGGCTATAAATTATGCCCGGCGTGTTCATTTTCAGTCCCTGACTTTCTCTTaGGGTCTTTCATTTCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SWHSCGTAINYARRVHFQSLTFS*GLSFPQ Trigger: CTGGGGAAATGAAAGACCCCAAGAGAAAGTCAGGGA...CTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTTCATTTCCCCAGTGAGTTAAAGGGGGACAAACAATACAGCTTTCTCTTGAGGCAGACAGCCACATaGAAGAGAAGGAAACCGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VFHFPSELKGDKQYSFLLRQTAT*KRRKPN Trigger: GTTCGGTTTCCTTCTCTTGCATGTGGCTGTCTGCCT...CAAGAGAAAGCTGTATTGTTTGTCCCCCTTTAACTCACTGGGGAAATGAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGGCGTGAAGACAAATCTAACATGGCACCTGACTaGAAGCCATATTACAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ERDFKAHQIFSRRREDKSNMAPD*KPYYRA Trigger: GGCTCTGTAATATGGCTTGCAGTCAGGTGCCATGTT...AGATTTGTCTTCACGCCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGGCGTGAAGACAAATCTCTTTCAGGGGCTGCCTaGGATTCCATTCTTCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ERDFKAHQIFSRRREDKSLSGAA*DSILLL Trigger: CAAAAGAAGAATGGAATCCCAGGCAGCCCCTGAAAG...AGATTTGTCTTCACGCCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGCATTCATGTGGCACGGCTATAAATTATGCCCGGCGTGTTCATTTTCAGAATGCAAGATCAAGCTaGGAACATGCATGGGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: SWHSCGTAINYARRVHFQNARSS*EHAWEH Trigger: GTGTTCCCATGCATGTTCCCAGCTTGATCTTGCATT...CTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR TCA 90 bp | GACGACAGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTCACACAGAGGAAACTTaGACATATTCTACCCTATTT | + |
|
Preference number: 2 (lower is better) Translates to: DDRDKYCVFPLMCKSQEGHTEET*TYSTLF Trigger: AAATAGGGTAGAATATGTTCAAGTTTCCTCTGTGTG...ACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCTGTCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | GACGACAGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTTCGCCAGTGGCATTTTaGACTCGTCTTTTTAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: DDRDKYCVFPLMCKSQEGSPVAF*TRLFNL Trigger: TAAATTAAAAAGACGAGTCCAAAATGCCACTGGCGA...ACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCTGTCGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGCATTCATGTGGCACGGCTATAAATTATGCCCGGCGTGTTCATTTTCAGAATACAGCTTTCTCTTaGTCCTCATCTCTTGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SWHSCGTAINYARRVHFQNTAFS*SSSLGS Trigger: GGAACCAAGAGATGAGGACCAAGAGAAAGCTGTATT...CTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAATATTCTTAATTTCCTGGCTTCATAGAGATGGTCATCAACACAAGAAGCAACCTCTGCACAGTGCCTaGTGCATCATGGGAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QIFLISWLHRDGHQHKKQPLHSA*CIMGEE Trigger: TTCCTCTCCCATGATGCATCAGGCACTGTGCAGAGG...TTGCTTCTTGTGTTGATGACCATCTCTATGAAGCCAGGAAATTAAGAATATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCGCATATTGCTAATGTGTGATGTGGAGATTCTGTTTATAATCAAGATACCGCTCACCTCTGCACAGTaGCTGATGCATCATGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: IRILLMCDVEILFIIKIPLTSAQ*LMHHGR Trigger: TCTCCCATGATGCATCAGGCACTGTGCAGAGGTGAG...CGGTATCTTGATTATAAACAGAATCTCCACATCACACATTAGCAATATGCGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTAGCAGGTTTCACTGTGGTATATTaGTATGTACTTTATACATATGTGGGTCAATCCCCCTCTCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVCVAGFTVVY*YVLYTYVGQSPSLL Trigger: AAGGAGAGAGGGGGATTGACCCACATATGTATAAAGTACATACAAATATACCACAGTGAAACCTGCTACACACACACACACACACACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAATATTCTTAATTTCCTGGCTTCATAGAGATGGTCATCAACACAAGAAGCAATCTTCCATCACTAGGTaGGTCCTCACCTCTGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: QIFLISWLHRDGHQHKKQSSITR*VLTSAQ Trigger: CTGTGCAGAGGTGAGGACTCACCTAGTGATGGAAGA...TTGCTTCTTGTGTTGATGACCATCTCTATGAAGCCAGGAAATTAAGAATATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAATATTCTTAATTTCCTGGCTTCATAGAGATGGTCATCAACACAAGAAGCAAGTGAGTCCTCACCTCTaGACAGTGCCTGATGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: QIFLISWLHRDGHQHKKQVSPHL*TVPDAS Trigger: TGATGCATCAGGCACTGTGCAGAGGTGAGGACTCAC...TTGCTTCTTGTGTTGATGACCATCTCTATGAAGCCAGGAAATTAAGAATATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAAATGTTTGCTTTGTATTAAAACTGGGTCCACGCAGGGTGCCTTCATCCTCAAGACTTCTCACGACATaGCACAGAATCACATTTACC | + |
|
Preference number: 2 (lower is better) Translates to: LNVCFVLKLGPRRVPSSSRLLTT*HRITFT Trigger: GGTAAATGTGATTCTGTGGCATGTCGTGAGAAGTCT...TGAGGATGAAGGCACCCTGCGTGGACCCAGTTTTAATACAAAGCAAACATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGGCGTGAAGACAAATCTTGCAGTTACTGTAGGTaGTTGCTAACATTTACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERDFKAHQIFSRRREDKSCSYCR*LLTFTK Trigger: CTTGGTAAATGTTAGCAAGCACCTACAGTAACTGCA...AGATTTGTCTTCACGCCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGCATTCATGTGGCACGGCTATAAATTATGCCCGGCGTGTTCATTTTCAGATTCCATTCTTCTTTTaGAAAGCTCCTGCTTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SWHSCGTAINYARRVHFQIPFFF*KAPASN Trigger: ATTGGAAGCAGGAGCTTTCCAAAAGAAGAATGGAAT...CTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 90 bp | GTCATACAGCATAAGCTAATGGATGCAAGTTCTCTCAGTATACACTaGGTAGGTCATGCAAGTTTTATTTGGCCTTTGTGTGCACGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VIQHKLMDASSLSIH*VGHASFIWPLCARF Trigger: GAAACGTGCACACAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGCATCCATTAGCTTATGCTGTATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGTATCATAGAAGCCAGAATAAGCAATGGCTTTATGTGATTATAGAAGGGTCCTGCTTCCAATGTTaGCATCTTAACCATCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: MEYHRSQNKQWLYVIIEGSCFQC*HLNHQN Trigger: GTTTTGATGGTTAAGATGTCAACATTGGAAGCAGGA...CCCTTCTATAATCACATAAAGCCATTGCTTATTCTGGCTTCTATGATACTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGTTCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTGGCCTTTGAGATATCTGTTGAATTaGATAGAACTGGCCTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ASSLSIHLVGHASFIWPLRYLLN*IELAFQ Trigger: TTGAAAGGCCAGTTCTATCCAATTCAACAGATATCT...CAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 90 bp | TCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTGGCCTTaGTGTGCACGTTTCCTGAAAACATCAGAATCATTTAATAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: SLSIHLVGHASFIWP*CARFLKTSESFNRY Trigger: ATATCTATTAAATGATTCTGATGTTTTCAGGAAACGTGCACACAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | CACACACACACACACACACACGGCCCTGACAAAGGCTaGGGCCTGGGACTGGGAAGCTGGTCCCTCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHGPDKG*GLGLGSWSLWN Trigger: ATTCCAGAGGGACCAGCTTCCCAGTCCCAGGCCTCAGCCTTTGTCAGGGCCGTGTGTGTGTGTGTGTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | CACACACACACACACACACACACACACACACGGCCCTaGCAAAGGCTGAGGCCTGGGACTGGGAAGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTRP*QRLRPGTGKLV Trigger: GACCAGCTTCCCAGTCCCAGGCCTCAGCCTTTGTCAGGGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | GCAGGGGCGAGGAAATACAAACTGACAGCAGGGAGCTaGCTGGTCCTGGGGGTCTCACCATTTGCAAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AGARKYKLTAGS*LVLGVSPFASP Trigger: TGGGCTTGCAAATGGTGAGACCCCCAGGACCAGCCAGCTCCCTGCTGTCAGTTTGTATTTCCTCGCCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR CCA 72 bp | ATGCAATTTCCCTCCCTCCCTGCAGCCAAGTCTAACTaGGGGCCTGTGGTTTGCAGCCGTCTGGCTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MQFPSLPAAKSN*GPVVCSRLALA Trigger: AGCAAGAGCCAGACGGCTGCAAACCACAGGCCCCCAGTTAGACTTGGCTGCAGGGAGGGAGGGAAATTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | TGCCTAGGGGTGTGCTGGCTGGATGACAGCTGGGCATaGGCAGAAGCATCCTTAGGAAAAGGTCCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CLGVCWLDDSWA*AEASLGKGPGA Trigger: AGCTCCAGGACCTTTTCCTAAGGATGCTTCTGCTCATGCCCAGCTGTCATCCAGCCAGCACACCCCTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTTGCAGACGATTGTGCAGGGCAATAGAGCTTaGTGCTCTGCCCACCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGHQRASYLLELELQTIVQGNRA*CSAHQH Trigger: GTGCTGGTGGGCAGAGCACAAAGCTCTATTGCCCTG...CACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | GAAGAGCAGCCGCCACCACAGGCATTAGCTGGCTACTaGCATCCCATGAAAGAGGAGAACAAGAACGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: EEQPPPQALAGY*HPMKEENKNGT Trigger: AGTGCCGTTCTTGTTCTCCTCTTTCATGGGATGGCAGTAGCCAGCTAATGCCTGTGGTGGCGGCTGCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR CCA 72 bp | ATGTCATCGTTTCCATGGCACCAGATGTTCGGCCGGTaGGCCCCAGCTTCTTGCTGTCAGCTTTCTTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: MSSFPWHQMFGR*APASCCQLSLL Trigger: GAGCAAAGAAAGCTGACAGCAAGAAGCTGGGGCCCACCGGCCGAACATCTGGTGCCATGGAAACGATGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | GTTATGTCTGTGCACCACGTGAGTGCCTGGAACCCTTaGTGGTCAGAAGAGGGCATCAGAGGGCATCGTATC | + |
|
Preference number: 3 (lower is better) Translates to: VMSVHHVSAWNP*WSEEGIRGHRI Trigger: GATACGATGCCCTCTGATGCCCTCTTCTGACCATCAAGGGTTCCAGGCACTCACGTGGTGCACAGACATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | GAAACCAGTGAGGCCAGAGGCAACATGGCACCTGACTaGAAGCCATATTACAGAGCCGTGCTAGCAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: ETSEARGNMAPD*KPYYRAVLAET Trigger: CGTTTCTGCTAGCACGGCTCTGTAATATGGCTTGCAGTCAGGTGCCATGTTGCCTCTGGCCTCACTGGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | CATCTGCCTGCATGTTATGTCTGTGCACCACGTGAGTaGCTGGAACCCTTGATGGTCAGAAGAGGGCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLPACYVCAPRE*LEPLMVRRGHQ Trigger: CTGATGCCCTCTTCTGACCATCAAGGGTTCCAGGCACTCACGTGGTGCACAGACATAACATGCAGGCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | CTGGGCATGAGCAGAAGCATCCTTAGGAAAAGGTCCTaGAGCTCAGGGGTGTGCATCAGACACCCTACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LGMSRSILRKRS*SSGVCIRHPTH Trigger: ATGTGTAGGGTGTCTGATGCACACCCCTGAGCTCCAGGACCTTTTCCTAAGGATGCTTCTGCTCATGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | AATGACCATGGATTAATGGGAAGGCTTCGTAGAGGCTaGGGCCGCAATCAATCCTCAGTCACTGGCGACACG | + |
|
Preference number: 3 (lower is better) Translates to: NDHGLMGRLRRG*GRNQSSVTGDT Trigger: CGTGTCGCCAGTGACTGAGGATTGATTGCGGCCCCAGCCTCTACGAAGCCTTCCCATTAATCCATGGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | GCAGGCTTGAAAAGCACTGGTTGGCTGGGAGTTGATTaGCTTACTGATCCTGGAACTCTCCTGGCCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AGLKSTGWLGVD*LTDPGTLLACG Trigger: TCCACAGGCCAGGAGAGTTCCAGGATCAGTAAGTCAATCAACTCCCAGCCAACCAGTGCTTTTCAAGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | GGGACCTCTGAAAGAGCAGCCAGTGCTCTTAACTGCTaGACCATCTCTCCCACCCCTACACTGACTGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: GTSERAASALNC*TISPTPTLTVN Trigger: GTTAACAGTCAGTGTAGGGGTGGGAGAGATGGTTCAGCAGTTAAGAGCACTGGCTGCTCTTTCAGAGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | CCGCAGCAGTGGGCAACAGAACAGTGGGAAGAAATCTaGTGTCTCCATGGCAGGGGCGAGGAAATACAAACT | + |
|
Preference number: 3 (lower is better) Translates to: PQQWATEQWEEI*CLHGRGEEIQT Trigger: AGTTTGTATTTCCTCGCCCCTGCCATGGAGACATCAGATTTCTTCCCACTGTTCTGTTGCCCACTGCTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR GCA 72 bp | GCTCTGACGACCATGTGTCATTCTGACAGTGTCTTCTaGCTCCCTCCCTTGGAGGCCACTATTTTGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALTTMCHSDSVF*LPPLEATILES Trigger: AGACTCCAAAATAGTGGCCTCCAAGGGAGGGAGGCAGAAGACACTGTCAGAATGACACATGGTCGTCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | CTGGAGTTGCAGACGATTGTGAGCTGCCGTTCTAAGTaGTGGGGATTGAAGTTGGGACCTCTGAAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LELQTIVSCRSK*WGLKLGPLKEQ Trigger: CTGCTCTTTCAGAGGTCCCAACTTCAATCCCCAGCACTTAGAACGGCAGCTCACAATCGTCTGCAACTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | TGTGTCATTCTGACAGTGTCTTCTGCCTCCCTCCCTTaGAGGCCACTATTTTGGAGTCTGCCTTCACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: CVILTVSSASLP*RPLFWSLPSHP Trigger: AGGGTGTGAAGGCAGACTCCAAAATAGTGGCCTCCAAGGGAGGGAGGCAGAAGACACTGTCAGAATGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | CACGGCATCCTATCTACGAACTCTGCCCATGGGCCATaGAAGTTACTCCCTGACTTTCTCTTGGGGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HGILSTNSAHGP*KLLPDFLLGSF Trigger: GAAAGACCCCAAGAGAAAGTCAGGGAGTAACTTCCATGGCCCATGGGCAGAGTTCGTAGATAGGATGCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTTGCAGACGATTGTGCCTACAGCAACATCCTaGTATGCATGCACTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: RGHQRASYLLELELQTIVPTATS*YACTHT Trigger: TGTGTGAGTGCATGCATACAAGGATGTTGCTGTAGG...CACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | GAGGTGGAAGCAGAATCAGTAGTTCAAAGTCACCCTTaGCCACATGGTGATTTCCAAGCCATCCTGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EVEAESVVQSHP*PHGDFQAILGH Trigger: GTGGCCCAGGATGGCTTGGAAATCACCATGTGGTCAAGGGTGACTTTGAACTACTGATTCTGCTTCCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR GCA 72 bp | GGACGGATCTCAGCTCACGATGGACCAAAGACCAAATaGAAGATCAAGCTGGGAACATGCATGGGAACACGT | + |
|
Preference number: 3 (lower is better) Translates to: GRISAHDGPKTK*KIKLGTCMGTR Trigger: ACGTGTTCCCATGCATGTTCCCAGCTTGATCTTGCATTTGGTCTTTGGTCCATCGTGAGCTGAGATCCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | AGCATCCTTAGGAAAAGGTCCTGGAGCTCAGGGGTGTaGATCAGACACCCTACACATGTCATCGTTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SILRKRSWSSGV*IRHPTHVIVSM Trigger: CATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGAGCTCCAGGACCTTTTCCTAAGGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | GACCTCAGAGGAAAGGGGCTTCCTTCCGTGACTGCTTaGCATGAAGATTTCACGGTTTTCACAAGGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLRGKGLPSVTA*HEDFTVFTRSR Trigger: TCTGGACCTTGTGAAAACCGTGAAATCTTCATGTCAAGCAGTCACGGAAGGAAGCCCCTTTCCTCTGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | CTATGGCTGTCTTGTAATTCACTGTGTAGACAAAACTaGCCTCGAACTCATGGAGATCCACCTGCCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LWLSCNSLCRQN*PRTHGDPPASA Trigger: GGCAGAGGCAGGTGGATCTCCATGAGTTCGAGGCCAGTTTTGTCTACACAGTGAATTACAAGACAGCCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | TCAAGGTCCTCTCAGAGTTACTTAGCAAATCTGGGGTaGGGTTCTAGTGCACCTGACGTCAGACTTCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRSSQSYLANLG*GSSAPDVRLLS Trigger: GGAAAGAAGTCTGACGTCAGGTGCACTAGAACCCCACCCCAGATTTGCTAAGTAACTCTGAGAGGACCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | TCAACACAAGAAGCAAGGGCTGTTGATGAGCTGGCATaGCGTCAGTTAAGTATGTTTGTGCCCCATCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: STQEARAVDELA*RQLSMFVPHLA Trigger: TGCCAGATGGGGCACAAACATACTTAACTGACGTCATGCCAGCTCATCAACAGCCCTTGCTTCTTGTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR GCA 72 bp | ACTAGGAGGGAATTTTCAAGACATCTGGCTCCTGTATaGAATTTCCCTCCCTCCCTGCAGCCAAGTCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: TRREFSRHLAPV*NFPPSLQPSLT Trigger: AGTTAGACTTGGCTGCAGGGAGGGAGGGAAATTGCATACAGGAGCCAGATGTCTTGAAAATTCCCTCCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | GTCACCCTTGACCACATGGTGATTTCCAAGCCATCCTaGGCCACAGACCTTATCTCAAAATCAAACACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VTLDHMVISKPS*ATDLISKSNTV Trigger: CACAGTGTTTGATTTTGAGATAAGGTCTGTGGCCCAGGATGGCTTGGAAATCACCATGTGGTCAAGGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR TCA 72 bp | AGAATCAGTAGTTCAAAGTCACCCTTGACCACATGGTaGTTTCCAAGCCATCCTGGGCCACAGACCTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: RISSSKSPLTTW*FPSHPGPQTLS Trigger: AGATAAGGTCTGTGGCCCAGGATGGCTTGGAAATCACCATGTGGTCAAGGGTGACTTTGAACTACTGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR CCA 72 bp | TCTGCCTTCACACCCTGTATCCCTGTAACAGAGGAGTaGATTGTAGCCTACTATCTAAGGGCCATTTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SAFTPCIPVTEE*IVAYYLRAISS Trigger: AGATGAAATGGCCCTTAGATAGTAGGCTACAATCCACTCCTCTGTTACAGGGATACAGGGTGTGAAGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTTCATTTCCCCAGTGAGTTAAAGGGGGACAAACAATACAGCTTTCTCTTGGTGATAGAAGCAGGCTaGAAAAGCACTGGTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VFHFPSELKGDKQYSFLLVIEAG*KSTGWL Trigger: CAGCCAACCAGTGCTTTTCAAGCCTGCTTCTATCAC...CAAGAGAAAGCTGTATTGTTTGTCCCCCTTTAACTCACTGGGGAAATGAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | CCTGGTGTCTACTGGGCCAGAGCATTGGACTACATATaGATCCGCATATTGCTAATGTGTGATGTGGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: PGVYWARALDYI*IRILLMCDVEI Trigger: AATCTCCACATCACACATTAGCAATATGCGGATTCATATGTAGTCCAATGCTCTGGCCCAGTAGACACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR GCA 72 bp | CTGCCATCCCATGAAAGAGGAGAACAAGAACGGCACTaGTCACAGAGATTTCCAATAGCAGTCATAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LPSHERGEQERH*SQRFPIAVISQ Trigger: TTGACTTATGACTGCTATTGGAAATCTCTGTGAGCAGTGCCGTTCTTGTTCTCCTCTTTCATGGGATGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR CCA 72 bp | AATAGACATAAACAAAACCTCTTACACCAGATATGGTaGTATAGGCGGCCTGGATTGCCAACACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NRHKQNLLHQIW*YRRPGLPTLGR Trigger: CCTCCCAAGTGTTGGCAATCCAGGCCGCCTATACCACCATATCTGGTGTAAGAGGTTTTGTTTATGTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGGCGTGAAGACAAATCTCAATACAGCTTTCTCTaGGTCCTCATCTCTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ERDFKAHQIFSRRREDKSQYSFL*VLISWF Trigger: GAACCAAGAGATGAGGACCAAGAGAAAGCTGTATTG...AGATTTGTCTTCACGCCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | CACTTTCATGTCACATGTATGCTATTAGGTTCTCTCTaGAGTCCCTCAAACCTCCATTTCCCCCTCTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: HFHVTCMLLGSL*SPSNLHFPLSY Trigger: ATATGAGAGGGGGAAATGGAGGTTTGAGGGACTGCAGAGAGAACCTAATAGCATACATGTGACATGAAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGGATTTCAAAGCCCATCAGATTTTCTCTAGGAGGCGTGAAGACAAATCTGATTCCATTCTTCTTTaGGAAAGCTCCTGCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ERDFKAHQIFSRRREDKSDSILL*ESSCFQ Trigger: TTGGAAGCAGGAGCTTTCCAAAAGAAGAATGGAATC...AGATTTGTCTTCACGCCTCCTAGAGAAAATCTGATGGGCTTTGAAATCCCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | CTCTTAACTGCTGAACCATCTCTCCCACCCCTACACTaGCTGTTAACATTTGTTTTCACTTGGCATAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLTAEPSLPPLH*LLTFVFTWHRK Trigger: CTTTCTATGCCAAGTGAAAACAAATGTTAACAGTCAGTGTAGGGGTGGGAGAGATGGTTCAGCAGTTAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | TCACTGCAGAGGAGTAAAGGCAACGTTTCAGAATTCTaGTTCTTCACAACAGACTCAGGACAGACAAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SLQRSKGNVSEF*FFTTDSGQTKS Trigger: TGATTTTGTCTGTCCTGAGTCTGTTGTGAAGAAGCAGAATTCTGAAACGTTGCCTTTACTCCTCTGCAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | GGATGCAAGTTCTCTCAGTATACACTTGGTAGGTCATaGAAGTTTTATTTGGCCTTTGTGTGCACGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GCKFSQYTLGRS*KFYLAFVCTFP Trigger: AGGAAACGTGCACACAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | ACACTCTTGGCATTCATGTGGCACGGCTATAAATTATaGCCGGCGTGTTCATTTTCAGTTCAAATGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLLAFMWHGYKL*PACSFSVQMCS Trigger: AGAACACATTTGAACTGAAAATGAACACGCCGGGCATAATTTATAGCCGTGCCACATGAATGCCAAGAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | TTTCACGTTAATTCAGCGGGCAGTTCCTTAACTAGTTaGCATCAAGGAGCAAAACAGAGTCTCAGAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FHVNSAGSSLTS*HQGAKQSLRTE Trigger: TTCTGTTCTGAGACTCTGTTTTGCTCCTTGATGCCAACTAGTTAAGGAACTGCCCGCTGAATTAACGTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR CCA 72 bp | GAAGTTGAAATTCTTCAGCGCAGAGACAACCTAATCTaGCTTCAGATGGTCATAGGGATAATACGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: EVEILQRRDNLI*LQMVIGIIRLH Trigger: ATGTAGCCGTATTATCCCTATGACCATCTGAAGCCAGATTAGGTTGTCTCTGCGCTGAAGAATTTCAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| 3UTR CCA 72 bp | TTTCAGTTTCTGGAACAGGGTCTCTCTACAAGGCTATaGCTGTCTTGTAATTCACTGTGTAGACAAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FQFLEQGLSTRL*LSCNSLCRQNW Trigger: CCAGTTTTGTCTACACAGTGAATTACAAGACAGCCATAGCCTTGTAGAGAGACCCTGTTCCAGAAACTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACGATTCACAACCAATAAGTCCCGGAACAAACCAGAAATGTCCAGCTCAAAGGTTGACTTCAGTATCTaGTTCTTTTTGTGTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRFTTNKSRNKPEMSSSKVDFSI*FFLCEP Trigger: AGGCTCACACAAAAAGAACAAGATACTGAAGTCAAC...CTTTGAGCTGGACATTTCTGGTTTGTTCCGGGACTTATTGGTTGTGAATCGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR TCA 72 bp | TCCATTCTTCTTTTGGAAAGCTCCTGCTTCCAATGTTaGCATCTTAACCATCAAAACCACCTGAGAATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SILLLESSCFQC*HLNHQNHLRIG Trigger: GCCTATTCTCAGGTGGTTTTGATGGTTAAGATGTCAACATTGGAAGCAGGAGCTTTCCAAAAGAAGAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | CATGTCTACTATAAAGCCATTCATAATCGCCAAGGCTaGAGTTACTGTAGGTGCTTGCTAACATTTACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HVYYKAIHNRQG*SYCRCLLTFTK Trigger: CTTGGTAAATGTTAGCAAGCACCTACAGTAACTGCAGCCTTGGCGATTATGAATGGCTTTATAGTAGACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | AGGGCAATGGAGTATCATAGAAGCCAGAATAAGCAATaGCTTTATGTGATTATAGAAGGGAGGGGATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RAMEYHRSQNKQ*LYVIIEGRGSE Trigger: TTCTGATCCCCTCCCTTCTATAATCACATAAAGCCATTGCTTATTCTGGCTTCTATGATACTCCATTGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | TTTGATGAGAATGTCAGAGAATTCACCGATGGGCCCTaGAGTGTTCTAAGAATCTGGATTAGAATGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FDENVREFTDGP*SVLRIWIRMAN Trigger: ATTTGCCATTCTAATCCAGATTCTTAGAACACTCCAGGGCCCATCGGTGAATTCTCTGACATTCTCATCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATGTTTGCTTTGTATTAAAACTGGGTCCACGCAGGGTGCCTTCATCCTCAAGTTACTGTAGGTGCTaGCTAACATTTACCAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LNVCFVLKLGPRRVPSSSSYCRC*LTFTKY Trigger: GTACTTGGTAAATGTTAGCAAGCACCTACAGTAACT...TGAGGATGAAGGCACCCTGCGTGGACCCAGTTTTAATACAAAGCAAACATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR GCA 72 bp | GCCATTCATAATCGCCAAGGCTGCAGTTACTGTAGGTaGTTGCTAACATTTACCAAGTACATACAAATAACA | + |
|
Preference number: 3 (lower is better) Translates to: AIHNRQGCSYCR*LLTFTKYIQIT Trigger: TGTTATTTGTATGTACTTGGTAAATGTTAGCAAGCACCTACAGTAACTGCAGCCTTGGCGATTATGAATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCACTGCAGAGGAGTAAAGGCAACGTTTCAGAATTCTGCTTCTTCACAACAACACACAGAGGAAACTaGAACATATTCTACCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: YSLQRSKGNVSEFCFFTTTHRGN*NIFYPI Trigger: AATAGGGTAGAATATGTTCAAGTTTCCTCTGTGTGT...TGTTGTGAAGAAGCAGAATTCTGAAACGTTGCCTTTACTCCTCTGCAGTGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGTTCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTGGCCTTTGAGTATCTTGTTCTTTTaGTGTGAGCCTTACAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASSLSIHLVGHASFIWPLSILFF*CEPYSV Trigger: AACACTGTAAGGCTCACACAAAAAGAACAAGATACT...CAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CCA 72 bp | GGGATAATACGGCTACATCAAATATTCTTAATTTCCTaGCTTCATAGAGATGGTCATCAACACAAGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GIIRLHQIFLIS*LHRDGHQHKKQ Trigger: TTGCTTCTTGTGTTGATGACCATCTCTATGAAGCCAGGAAATTAAGAATATTTGATGTAGCCGTATTATCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGGGGCGAGGAAATACAAACTGACAGCAGGGAGCTGGCTGGTCCTGGGGCGCCACGACTCCCCTTaGACACAGTGTAAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MAGARKYKLTAGSWLVLGRHDSP*TQCKPR Trigger: CCTTGGCTTACACTGTGTGCAAGGGGAGTCGTGGCG...CCCCAGGACCAGCCAGCTCCCTGCTGTCAGTTTGTATTTCCTCGCCCCTGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| 3UTR CAA 72 bp | CTAACTGGGGGCCTGTGGTTTGCAGCCGTCTGGCTCTaGCTTAGAGGAAGTCAGGTCTGGGTAGCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLWFAAVWL*LRGSQVWVATM Trigger: CATGGTGGCTACCCAGACCTGACTTCCTCTAAGCAAGAGCCAGACGGCTGCAAACCACAGGCCCCCAGTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCACACAGCAAACACCACAGAGCGTGTGACCTCAGTAAGGCGTTCGATGGATCCGGCGTTCCTCGCTaGTCATCAGCATGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPHSKHHRACDLSKAFDGSGVPR*SSACPG Trigger: ACCTGGACATGCTGATGACCAGCGAGGAACGCCGGA...TCCATCGAACGCCTTACTGAGGTCACACGCTCTGTGGTGTTTGCTGTGTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGCACCAGATGTTCGGCCGGTGGGCCCCAGCTTCTTGCTGTCAGCTTTCTTGGGGTCACAGCTGTaGTTCAGCAAAGACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SMAPDVRPVGPSFLLSAFLGSQL*FSKDIL Trigger: CAGTATGTCTTTGCTGAATCACAGCTGTGACCCCAA...GAAAGCTGACAGCAAGAAGCTGGGGCCCACCGGCCGAACATCTGGTGCCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | GGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTaGCAGACGATTGTGAGCTGCCGTTCTAAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHQRASYLLELE*QTIVSCRSKCW Trigger: CCAGCACTTAGAACGGCAGCTCACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | CACCTGACGTCAGACTTCTTTCCTCATTGTGAAACGGCCTTCAGATGCCCACTACCAGCATCCCCAGGTTaGTGCAGGCATCCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLTSDFFPHCETAFRCPLPASPG*CRHPWH Trigger: GTGCCATGGATGCCTGCATCAACCTGGGGATGCTGG...TAGTGGGCATCTGAAGGCCGTTTCACAATGAGGAAAGAAGTCTGACGTCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCACACAGCAAACACCACAGAGCGTGTGACCTCAGTAAGGCGTTCGATGGATCCTTGTCCTGGGTTTaGCATCGGATGCAGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GPHSKHHRACDLSKAFDGSLSWV*HRMQSH Trigger: GTGTGACTGCATCCGATGCCAAACCCAGGACAAGGA...TCCATCGAACGCCTTACTGAGGTCACACGCTCTGTGGTGTTTGCTGTGTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | CAGACGATTGTGAGCTGCCGTTCTAAGTGCTGGGGATaGAAGTTGGGACCTCTGAAAGAGCAGCCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTIVSCRSKCWG*KLGPLKEQPVL Trigger: GAGCACTGGCTGCTCTTTCAGAGGTCCCAACTTCAATCCCCAGCACTTAGAACGGCAGCTCACAATCGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | ATGTGTCATTCTGACAGTGTCTTCTGCCTCCCTCCCTaGGAGGCCACTATTTTGGAGTCTGCCTTCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: MCHSDSVFCLPP*EATILESAFTP Trigger: GGGTGTGAAGGCAGACTCCAAAATAGTGGCCTCCAAGGGAGGGAGGCAGAAGACACTGTCAGAATGACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCATCCCATGAAAGAGGAGAACAAGAACGGCACTGCTCACAGAGATTTCCACCCGGTTGGCAGTCGTaGACTTTTCCACCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSHERGEQERHCSQRFPPGWQS*TFPPSV Trigger: CACTGAAGGTGGAAAAGTTCACGACTGCCAACCGGG...TGGAAATCTCTGTGAGCAGTGCCGTTCTTGTTCTCCTCTTTCATGGGATGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTGTGTGTCGCCACGACTCCCCTTaGACACAGTGTAAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDKYCVFPLMCKSQEGVCRHDSP*TQCKPR Trigger: CCTTGGCTTACACTGTGTGCAAGGGGAGTCGTGGCG...ACACACACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTGTGTGTCCCGGTTGGCAGTCGTaGACTTTTCCACCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDKYCVFPLMCKSQEGVCPGWQS*TFPPSV Trigger: CACTGAAGGTGGAAAAGTTCACGACTGCCAACCGGG...ACACACACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTGTGTGTTCAGCTGGTAGATGTTaGTGTCGGGAAGCCGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDKYCVFPLMCKSQEGVCSAGRC*CREAGW Trigger: CCAACCGGCTTCCCGACATCAACATCTACCAGCTGA...ACACACACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCACACAGCAAACACCACAGAGCGTGTGACCTCAGTAAGGCGTTCGATGGAATGTTGAAAAGTCATTaGAAGTTGCCTCAGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPHSKHHRACDLSKAFDGMLKSH*KLPQAL Trigger: GAGGGCCTGAGGCAACTTGCAATGACTTTTCAACAT...TCCATCGAACGCCTTACTGAGGTCACACGCTCTGTGGTGTTTGCTGTGTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTTGCAGACGATTGTGGATGGAGCTGCAGCTTaGCAACTTTCATCACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGHQRASYLLELELQTIVDGAAA*QLSSLA Trigger: TGCAAGTGATGAAAGTTGGCAAGCTGCAGCTCCATC...CACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTTCATTTCCCCAGTGAGTTAAAGGGGGACAAACAATACAGCTTTCTCTTGTACTGGTCCCTCAGCTaGTTCCGGCGTTCCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFHFPSELKGDKQYSFLLYWSLS*FRRSSL Trigger: CAGCGAGGAACGCCGGAAGCAGCTGAGGGACCAGTA...CAAGAGAAAGCTGTATTGTTTGTCCCCCTTTAACTCACTGGGGAAATGAAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | GACGACAGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTGGGTTTGGCATCGGATaGAGTCACACTCAAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DDRDKYCVFPLMCKSQEGGFGIG*SHTQSS Trigger: ACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCC...ACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCTGTCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGCTGTCTTGTAATTCACTGTGTAGACAAAACTGGCCTCGAACTCATGGATCTTCAATCAGGCTGTaGTCTCGGCCGTGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LWLSCNSLCRQNWPRTHGSSIRL*SRPWVT Trigger: AGTGACCCACGGCCGAGAGCACAGCCTGATTGAAGA...TCCATGAGTTCGAGGCCAGTTTTGTCTACACAGTGAATTACAAGACAGCCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGAAATGTCCAGCTCAAAGTGCTGACCTACAGCACTATGAGCTAAACCAAGCACGCAGTAAGAGGTaGGGCCCGTTGAATACGATG | + |
|
Preference number: 4 (lower is better) Translates to: NQKCPAQSADLQHYELNQARSKR*GPLNTM Trigger: CATCGTATTCAACGGGCCCCACCTCTTACTGCGTGC...TTGGTTTAGCTCATAGTGCTGTAGGTCAGCACTTTGAGCTGGACATTTCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGCTGTCTTGTAATTCACTGTGTAGACAAAACTGGCCTCGAACTCATGGACACTCAAAGCAGTACTaGTCCCTCAGCTGCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLSCNSLCRQNWPRTHGHSKQY*SLSCFR Trigger: CCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAGTG...TCCATGAGTTCGAGGCCAGTTTTGTCTACACAGTGAATTACAAGACAGCCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | GACGACAGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTGCCTCAGGTTCTTCATaGCTTGAGGAAACATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DDRDKYCVFPLMCKSQEGASGSS*LEETCL Trigger: AAGGCATGTTTCCTCAAGCCATGAAGAACCTGAGGC...ACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCTGTCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | AGATATGGTGGTATAGGCGGCCTGGATTGCCAACACTaGGGAGGTGGAAGCAGAATCAGTAGTTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RYGGIGGLDCQH*GGGSRISSSKS Trigger: TGACTTTGAACTACTGATTCTGCTTCCACCTCCCAAGTGTTGGCAATCCAGGCCGCCTATACCACCATATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| CDS-3UTR GCA 90 bp | TTAAATGTTTGCTTTGTATTAAAACTGGGTCCACGCAGGGTGCCTTCATCCTCAGGTGAGCTCCTCTCCTaGTTCAATTTCCCGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNVCFVLKLGPRRVPSSSGELLS*FNFPHC Trigger: GCAGTGCGGGAAATTGAAGCAGGAGAGGAGCTCACC...TGAGGATGAAGGCACCCTGCGTGGACCCAGTTTTAATACAAAGCAAACATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGAAATGTCCAGCTCAAAGTGCTGACCTACAGCACTATGAGCTAAACCAATGCTCCCACTTCCAGTaGGCCTTCAGCTCTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: NQKCPAQSADLQHYELNQCSHFQ*AFSSSI Trigger: AATCGAAGAGCTGAAGGCGCACTGGAAGTGGGAGCA...TTGGTTTAGCTCATAGTGCTGTAGGTCAGCACTTTGAGCTGGACATTTCTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTTCATTTCCCCAGTGAGTTAAAGGGGGACAAACAATACAGCTTTCTCTTGTGGAATTGCTGTTTATaGTCGCCTGGCACAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFHFPSELKGDKQYSFLLWNCCL*SPGTAP Trigger: TGGCGCTGTGCCAGGCGATCATAAACAGCAATTCCA...CAAGAGAAAGCTGTATTGTTTGTCCCCCTTTAACTCACTGGGGAAATGAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | GACGACAGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTAAAGTCATTGCAAGTTaGCTCAGGCCCTCTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DDRDKYCVFPLMCKSQEGKVIAS*LRPSFL Trigger: TAAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTT...ACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCTGTCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR GCA 90 bp | ATACCGGAAGTGAGGGGACTCAGCAGGTTTGTCCAGGAACCATCATTTAAACACATGTTGAAAAGTCATTaGAAGTTGCCTCAGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPEVRGLSRFVQEPSFKHMLKSH*KLPQAL Trigger: GAGGGCCTGAGGCAACTTGCAATGACTTTTCAACAT...GTGTTTAAATGATGGTTCCTGGACAAACCTGCTGAGTCCCCTCACTTCCGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR GCA 90 bp | AATGAACTCGGCTTTCTTCCATCACTAGGTGAGTCCTCACCTCTGCACAGTGCCTCTTCTGCCATGTTTTaGAAAGGCTTCAAAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NELGFLPSLGESSPLHSASSAMF*KGFKKV Trigger: GACCTTTTTGAAGCCTTTGCAAAACATGGCAGAAGA...GGCACTGTGCAGAGGTGAGGACTCACCTAGTGATGGAAGAAAGCCGAGTTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR GCA 90 bp | CAACGATTCACAACCAATAAGTCCCGGAACAAACCAGAAATGTCCAGCTCAAAGCCAACTTTCATCACTTaGACACCTCTGACGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QRFTTNKSRNKPEMSSSKPTFIT*TPLTGW Trigger: CCATCCCGTCAGAGGTGTGCAAGTGATGAAAGTTGG...CTTTGAGCTGGACATTTCTGGTTTGTTCCGGGACTTATTGGTTGTGAATCGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGTTCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTGGCCTTTGCTGTTTATGATCGCCTaGCACAGCGCCAGAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSIHLVGHASFIWPLLFMIA*HSARTC Trigger: GCAGGTTCTGGCGCTGTGCCAGGCGATCATAAACAG...CAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTTGTCCAGGAACCATCATTTAAACACAGGACATACAGAATCTCTGAAGTTCCCGGTTGGCAGTCGTaGACTTTTCCACCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFVQEPSFKHRTYRISEVPGWQS*TFPPSV Trigger: CACTGAAGGTGGAAAAGTTCACGACTGCCAACCGGG...AACTTCAGAGATTCTGTATGTCCTGTGTTTAAATGATGGTTCCTGGACAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR TCA 90 bp | AATGAACTCGGCTTTCTTCCATCACTAGGTGAGTCCTCACCTCTGCACAGTGCCTCTCTCATGAAATGTTaGAAAGTCATTGCAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NELGFLPSLGESSPLHSASLMKC*KVIASC Trigger: GCAACTTGCAATGACTTTTCAACATTTCATGAGAGA...GGCACTGTGCAGAGGTGAGGACTCACCTAGTGATGGAAGAAAGCCGAGTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAGTATCATAGAAGCCAGAATAAGCAATGGCTTTATGTGATTATAGAAGGGTCACTTGCACACCTCTaGCGGGATGGCTTCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MEYHRSQNKQWLYVIIEGSLAHL*RDGFQG Trigger: TCCCTGGAAGCCATCCCGTCAGAGGTGTGCAAGTGA...CCCTTCTATAATCACATAAAGCCATTGCTTATTCTGGCTTCTATGATACTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTAAGTATGTTTGTGCCCCATCTGGCACATTTTCACGTTAATTCAGCGGGCTGGCACTGCAGTATTTaGCAATTCGGCATTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLSMFVPHLAHFHVNSAGWHCSI*QFGIEN Trigger: GTTCTCAATGCCGAATTGCCAAATACTGCAGTGCCA...GCCCGCTGAATTAACGTGAAAATGTGCCAGATGGGGCACAAACATACTTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR TCA 90 bp | ATACCGGAAGTGAGGGGACTCAGCAGGTTTGTCCAGGAACCATCATTTAAACACGGATCTCCTCTCTCATaGAATGTTGAAAAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: IPEVRGLSRFVQEPSFKHGSPLS*NVEKSL Trigger: CAATGACTTTTCAACATTTCATGAGAGAGGAGATCC...GTGTTTAAATGATGGTTCCTGGACAAACCTGCTGAGTCCCCTCACTTCCGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR GCA 90 bp | ATATTGCTAATGTGTGATGTGGAGATTCTGTTTATAATCAAGATACCGGAAGTGCGCCACGACTCCCCTTaGACACAGTGTAAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLMCDVEILFIIKIPEVRHDSP*TQCKPR Trigger: CCTTGGCTTACACTGTGTGCAAGGGGAGTCGTGGCG...CACTTCCGGTATCTTGATTATAAACAGAATCTCCACATCACACATTAGCAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTAAGTATGTTTGTGCCCCATCTGGCACATTTTCACGTTAATTCAGCGGGCAAAGTCATTGCAAGTTaGCTCAGGCCCTCTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLSMFVPHLAHFHVNSAGKVIAS*LRPSFL Trigger: TAAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTT...GCCCGCTGAATTAACGTGAAAATGTGCCAGATGGGGCACAAACATACTTAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGTTCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTGGCCTTTGTGGCTTGAGGAAACATaGCTTGATGGAGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSIHLVGHASFIWPLWLEET*LDGAAA Trigger: AGCTGCAGCTCCATCAAGGCATGTTTCCTCAAGCCA...CAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGAAATGTCCAGCTCAAAGTGCTGACCTACAGCACTATGAGCTAAACCAATGGCACTGCAGTATTTaGCAATTCGGCATTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NQKCPAQSADLQHYELNQWHCSI*QFGIEN Trigger: GTTCTCAATGCCGAATTGCCAAATACTGCAGTGCCA...TTGGTTTAGCTCATAGTGCTGTAGGTCAGCACTTTGAGCTGGACATTTCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGAACAGTCACAAAAACATGAGGCACAATCAATACCATTGGTCATCAGGAGGAGGCTCGTATGTTaGCATCACATTCTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSEQSQKHEAQSIPLVIRRRLVC*HHILPG Trigger: TCCTGGAAGAATGTGATGCCAACATACGAGCCTCCT...CCTGATGACCAATGGTATTGATTGTGCCTCATGTTTTTGTGACTGTTCAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | ACATGCCACAGAATCACATTTACCCACATAAACACATaGGCAATTTCTACAGAAGGTCCACACAGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TCHRITFTHINT*AISTEGPHSKH Trigger: GTGTTTGCTGTGTGGACCTTCTGTAGAAATTGCCAATGTGTTTATGTGGGTAAATGTGATTCTGTGGCATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | AATCAATCCTCAGTCACTGGCGACACGGATTTTAAATaGTGTTCTCTGACCGTTTCCCTCTTTGCCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: NQSSVTGDTDFK*CSLTVSLFAKI Trigger: AATTTTGGCAAAGAGGGAAACGGTCAGAGAACACAATTTAAAATCCGTGTCGCCAGTGACTGAGGATTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTAGCAGGTTTCACTGTGGTATATTaGTATGTACTTTATACATATGTGGGTCAATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVAGFTVVY*YVLYTYVGQSP Trigger: GGGGGATTGACCCACATATGTATAAAGTACATACAAATATACCACAGTGAAACCTGCTACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATGTTTGCTTTGTATTAAAACTGGGTCCACGCAGGGTGCCTTCATCCTCATCTCTCATGAAATGTTaGAAAGTCATTGCAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNVCFVLKLGPRRVPSSSSLMKC*KVIASC Trigger: GCAACTTGCAATGACTTTTCAACATTTCATGAGAGA...TGAGGATGAAGGCACCCTGCGTGGACCCAGTTTTAATACAAAGCAAACATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | CATAAGCTAATGGATGCAAGTTCTCTCAGTATACACTaGGTAGGTCATGCAAGTTTTATTTGGCCTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKLMDASSLSIH*VGHASFIWPLC Trigger: ACACAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGCATCCATTAGCTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAGTATCATAGAAGCCAGAATAAGCAATGGCTTTATGTGATTATAGAAGGGGGATCTCCTCTCTCATaGAATGTTGAAAAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MEYHRSQNKQWLYVIIEGGSPLS*NVEKSL Trigger: CAATGACTTTTCAACATTTCATGAGAGAGGAGATCC...CCCTTCTATAATCACATAAAGCCATTGCTTATTCTGGCTTCTATGATACTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| 3UTR CAA 72 bp | GAACAGTCACAAAAACATGAGGCACAATCAATACCATaGGTCATCAGGGAAATCGAAACTATGATGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSQKHEAQSIP*VIREIETMMKY Trigger: ATATTTCATCATAGTTTCGATTTCCCTGATGACCAATGGTATTGATTGTGCCTCATGTTTTTGTGACTGTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS GCA 90 bp | CCTTGCCCAGTAGGCAGCGATCACAGACTACGCCACGACTCCCCTTaGACACAGTGTAAGCCAAGGGGTCGGAGCGGAAGAGCAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCPVGSDHRLRHDSP*TQCKPRGRSGRAAP Trigger: GGGAGCTGCTCTTCCGCTCCGACCCCTTGGCTTACACTGTGTGCAAGGGGAGTCGTGGCGTAGTCTGTGATCGCTGCCTACTGGGCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| CDS GCA 90 bp | TTTCAGGCTCAGAGCTCAGCCACGCGGCCCTTTCCCAAACCACCTTaGCCAGTAGGCAGCGATCACAGACTACGCCACGACTCCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FQAQSSATRPFPKPP*PVGSDHRLRHDSPC Trigger: GCAAGGGGAGTCGTGGCGTAGTCTGTGATCGCTGCCTACTGGGCAAGGTGGTTTGGGAAAGGGCCGCGTGGCTGAGCTCTGAGCCTGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGGGGCGAGGAAATACAAACTGACAGCAGGGAGCTGGCTGGTCCTGGGGAGCCCGTTTCCCCGGTaGGCAGTCGTGAACTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MAGARKYKLTAGSWLVLGSPFPR*AVVNFS Trigger: GGAAAAGTTCACGACTGCCAACCGGGGAAACGGGCT...CCCCAGGACCAGCCAGCTCCCTGCTGTCAGTTTGTATTTCCTCGCCCCTGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| CDS TCA 90 bp | TGGTGCGCATGGCGTAGAACAACGCCTCCTCCAGCATCCCCAGGTTaGTGCAGGCATCCATGGCACAGTCGAGCACCTTCAGCTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: WCAWRRTTPPPASPG*CRHPWHSRAPSAGR Trigger: TCTACCAGCTGAAGGTGCTCGACTGTGCCATGGATGCCTGCATCAACCTGGGGATGCTGGAGGAGGCGTTGTTCTACGCCATGCGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS TCA 90 bp | TCCGGCGTTCCTCGCTGGTCATCAGCATGTCCAGGTAGCAGATGGTaGGCTCCTCTCCTGCTTCAATTTCCCGCACTGCACGCAGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGVPRWSSACPGSRW*APLLLQFPALHAVR Trigger: TCTTACTGCGTGCAGTGCGGGAAATTGAAGCAGGAGAGGAGCTCACCATCTGCTACCTGGACATGCTGATGACCAGCGAGGAACGCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS GCA 90 bp | CACCCGTTAGCATGTCAGCATCCTTGTCCTGGGTTTGGCATCGGATaGAGTCACACTCAAAGCAGTACTGGTCCCTCAGCTGCTTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPLACQHPCPGFGIG*SHTQSSTGPSAASG Trigger: GCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGGATGCTGACATGCTAACGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CCA 90 bp | TTGTCCTGGGTTTGGCATCGGATGCAGTCACACTCAAAGCAGTACTaGTCCCTCAGCTGCTTCCGGCGTTCCTCGCTGGTCATCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSWVWHRMQSHSKQY*SLSCFRRSSLVISM Trigger: CATGCTGATGACCAGCGAGGAACGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS TCA 90 bp | CTGCTTCAATTTCCCGCACTGCACGCAGTAAGAGGTGGGGCCCGTTaGATACGATGGAGCAGTTGGGGTCACAGCTGTGATTCAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLQFPALHAVRGGAR*IRWSSWGHSCDSAK Trigger: CTTTGCTGAATCACAGCTGTGACCCCAACTGCTCCATCGTATTCAACGGGCCCCACCTCTTACTGCGTGCAGTGCGGGAAATTGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CCA 90 bp | ATTTGCTCGTCACCCGTTAGCATGTCAGCATCCTTGTCCTGGGTTTaGCATCGGATGCAGTCACACTCAAAGCAGTACTGGTCCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ICSSPVSMSASLSWV*HRMQSHSKQYWSLS Trigger: GCTGAGGGACCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGGATGCTGACATGCTAACGGGTGACGAGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATGGCACCAGATATCCTTGTCCTGGGTTaGGCATCGGATGCAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGVCIRHPTHVIVSMAPDILVLG*ASDAVT Trigger: TGTGACTGCATCCGATGCCAAACCCAGGACAAGGAT...ATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATGGCACCAGATTTGAGGAAACATGCCTaGATGGAGCTGCAGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVCIRHPTHVIVSMAPDLRKHA*MELQLA Trigger: GGCAAGCTGCAGCTCCATCAAGGCATGTTTCCTCAA...ATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CCA 90 bp | TTCCATATTTGCTCGTCACCCGTTAGCATGTCAGCATCCTTGTCCTaGGTTTGGCATCGGATGCAGTCACACTCAAAGCAGTACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FHICSSPVSMSASLS*VWHRMQSHSKQYWS Trigger: GGACCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGGATGCTGACATGCTAACGGGTGACGAGCAAATATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACAGCAAACACCACAGAGCGTGTGACCTCAGTAAGGCGTTCGATGGAAAAAGTCATTGCAAGTaGCCTCAGGCCCTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPHSKHHRACDLSKAFDGKSHCK*PQALFL Trigger: AAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTTT...TCCATCGAACGCCTTACTGAGGTCACACGCTCTGTGGTGTTTGCTGTGTGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACAGCAAACACCACAGAGCGTGTGACCTCAGTAAGGCGTTCGATGGAAATGTTGAAAAGTCATaGCAAGTTGCCTCAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPHSKHHRACDLSKAFDGNVEKS*QVASGP Trigger: AGGGCCTGAGGCAACTTGCAATGACTTTTCAACATT...TCCATCGAACGCCTTACTGAGGTCACACGCTCTGTGGTGTTTGCTGTGTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTGTGTGTGCCAACTTTCATCACTaGCACACCTCTGACGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RDKYCVFPLMCKSQEGVCANFHH*HTSDGM Trigger: CATCCCGTCAGAGGTGTGCAAGTGATGAAAGTTGGC...ACACACACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS TCA 90 bp | CAAAAGAAGGCGGCAGCTGAGACGCATCCTGGATCTCCTCTCTCATaGAATGTTGAAAAGTCATTGCAAGTTGCCTCAGGCCCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QKKAAAETHPGSPLS*NVEKSLQVASGPLS Trigger: AGAAAGAGGGCCTGAGGCAACTTGCAATGACTTTTCAACATTTCATGAGAGAGGAGATCCAGGATGCGTCTCAGCTGCCGCCTTCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAAGTACTGCGTTTTCCCTCTCATGTGTAAGAGTCAGGAGGGTGTGTGTGGCGGATATCTGGGCTaGCAGCTTTTAAGACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RDKYCVFPLMCKSQEGVCGGYLG*QLLRQL Trigger: CAGTTGTCTTAAAAGCTGCAAGCCCAGATATCCGCC...ACACACACCCTCCTGACTCTTACACATGAGAGGGAAAACGCAGTACTTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | CACCTGACGTCAGACTTCTTTCCTCATTGTGAAACGGCCTTCAGATGCCCACTAATGTCGGGAAGCCGGTaGGAATTGCTGTTTATGATC | + |
|
Preference number: 5 (lower is better) Translates to: HLTSDFFPHCETAFRCPLMSGSR*ELLFMI Trigger: GATCATAAACAGCAATTCCAACCGGCTTCCCGACAT...TAGTGGGCATCTGAAGGCCGTTTCACAATGAGGAAAGAAGTCTGACGTCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | CACCTGACGTCAGACTTCTTTCCTCATTGTGAAACGGCCTTCAGATGCCCACTACAGGTTCTTCATGGCTaGAGGAAACATGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HLTSDFFPHCETAFRCPLQVLHG*RKHALM Trigger: CATCAAGGCATGTTTCCTCAAGCCATGAAGAACCTG...TAGTGGGCATCTGAAGGCCGTTTCACAATGAGGAAAGAAGTCTGACGTCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTGGCCTTTGAGCCCGTTTCCCCGGTaGGCAGTCGTGAACTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSIHLVGHASFIWPLSPFPR*AVVNFS Trigger: GGAAAAGTTCACGACTGCCAACCGGGGAAACGGGCT...CAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACAGCAAACACCACAGAGCGTGTGACCTCAGTAAGGCGTTCGATGGATTATCTTCAGTGAGTTaGCTAATATTGGACTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPHSKHHRACDLSKAFDGLSSVS*LILDSR Trigger: TCTGGAGTCCAATATTAGCAAACTCACTGAAGATAA...TCCATCGAACGCCTTACTGAGGTCACACGCTCTGTGGTGTTTGCTGTGTGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCATCAGAGGGCATCGTATCTCCTGGAACTGGAGTTGCAGACGATTGTGCAGATAGTGAACGAATaGCAGATCACTTTTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGHQRASYLLELELQTIVQIVNE*QITFAK Trigger: CTTTGCAAAAGTGATCTGCAATTCGTTCACTATCTG...CACAATCGTCTGCAACTCCAGTTCCAGGAGATACGATGCCCTCTGATGCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | TTAAATGTTTGCTTTGTATTAAAACTGGGTCCACGCAGGGTGCCTTCATCCTCAAAGAGGTGGGGCCCGTaGAATACGATGGAGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNVCFVLKLGPRRVPSSSKRWGP*NTMEQL Trigger: CAACTGCTCCATCGTATTCAACGGGCCCCACCTCTT...TGAGGATGAAGGCACCCTGCGTGGACCCAGTTTTAATACAAAGCAAACATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTCTCTCAGTATACACTTGGTAGGTCATGCAAGTTTTATTTGGCCTTTGTCCAGCATCCCCAGGTaGATGCAGGCATCCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSIHLVGHASFIWPLSSIPR*MQASMA Trigger: TGCCATGGATGCCTGCATCAACCTGGGGATGCTGGA...CAAAGGCCAAATAAAACTTGCATGACCTACCAAGTGTATACTGAGAGAACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | CGCATATTGCTAATGTGTGATGTGGAGATTCTGTTTATAATCAAGATACCGGAAAGCCCGTTTCCCCGGTaGGCAGTCGTGAACTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RILLMCDVEILFIIKIPESPFPR*AVVNFS Trigger: GGAAAAGTTCACGACTGCCAACCGGGGAAACGGGCT...TTCCGGTATCTTGATTATAAACAGAATCTCCACATCACACATTAGCAATATGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGTGTGCATCAGACACCCTACACATGTCATCGTTTCCATGGCACCAGATAATTGCAGATCACTTTaGCAAAGGCTTCAAAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGVCIRHPTHVIVSMAPDNCRSL*QRLQKG Trigger: ACCTTTTTGAAGCCTTTGCAAAAGTGATCTGCAATT...ATCTGGTGCCATGGAAACGATGACATGTGTAGGGTGTCTGATGCACACCCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS GCA 90 bp | AGACGCATCCTGGATCTCCTCTCTCATGAAATGTTGAAAAGTCATTaGAAGTTGCCTCAGGCCCTCTTTCTTATCTTCAGTGAGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRILDLLSHEMLKSH*KLPQALFLIFSEFA Trigger: AGCAAACTCACTGAAGATAAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTTTCAACATTTCATGAGAGAGGAGATCCAGGATGCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | CCACCTGAGAATAGGCAAAGCCAAGTCGCCAGTGGCATTTTGGACTCGTCTTTTCTCTCTCATGAAATGTaGAAAAGTCATTGCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPENRQSQVASGILDSSFLSHEM*KSHCKL Trigger: CAACTTGCAATGACTTTTCAACATTTCATGAGAGAG...AAAAGACGAGTCCAAAATGCCACTGGCGACTTGGCTTTGCCTATTCTCAGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | ATACCGGAAGTGAGGGGACTCAGCAGGTTTGTCCAGGAACCATCATTTAAACACTTATCTTCAGTGAGTTaGCTAATATTGGACTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IPEVRGLSRFVQEPSFKHLSSVS*LILDSR Trigger: TCTGGAGTCCAATATTAGCAAACTCACTGAAGATAA...GTGTTTAAATGATGGTTCCTGGACAAACCTGCTGAGTCCCCTCACTTCCGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTTTGTCCAGGAACCATCATTTAAACACAGGACATACAGAATCTCTGAAGAAAAGTCATTGCAAGTaGCCTCAGGCCCTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLSRNHHLNTGHTESLKKSHCK*PQALFL Trigger: AAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTTT...CTTCAGAGATTCTGTATGTCCTGTGTTTAAATGATGGTTCCTGGACAAACCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTTTGGAAAGCTCCTGCTTCCAATGTTGACATCTTAACCATCAAAACCTCCTGCATCTCCGCGTaGCAGATAGTGAACGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: FFFWKAPASNVDILTIKTSCISA*QIVNEL Trigger: CAATTCGTTCACTATCTGCAACGCGGAGATGCAGGA...GGTTTTGATGGTTAAGATGTCAACATTGGAAGCAGGAGCTTTCCAAAAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | CAAATATTCTTAATTTCCTGGCTTCATAGAGATGGTCATCAACACAAGAAGCAAGGCGGATATCTGGGCTaGCAGCTTTTAAGACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: QIFLISWLHRDGHQHKKQGGYLG*QLLRQL Trigger: CAGTTGTCTTAAAAGCTGCAAGCCCAGATATCCGCC...TTGCTTCTTGTGTTGATGACCATCTCTATGAAGCCAGGAAATTAAGAATATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR CAA 90 bp | TATTCACTGCAGAGGAGTAAAGGCAACGTTTCAGAATTCTGCTTCTTCACAACATTTCTTCAGCGACTCTaGAACCTCCTTCCATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: YSLQRSKGNVSEFCFFTTFLQRL*NLLPYL Trigger: CAAATATGGAAGGAGGTTCAAGAGTCGCTGAAGAAA...TGTTGTGAAGAAGCAGAATTCTGAAACGTTGCCTTTACTCCTCTGCAGTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS-3UTR CAA 90 bp | ATATTGCTAATGTGTGATGTGGAGATTCTGTTTATAATCAAGATACCGGAAGTGAATGTTGAAAAGTCATaGCAAGTTGCCTCAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLMCDVEILFIIKIPEVNVEKS*QVASGP Trigger: AGGGCCTGAGGCAACTTGCAATGACTTTTCAACATT...CACTTCCGGTATCTTGATTATAAACAGAATCTCCACATCACACATTAGCAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR CAA 90 bp | ATCCGCATATTGCTAATGTGTGATGTGGAGATTCTGTTTATAATCAAGATACCGCTCTCTCATGAAATGTaGAAAAGTCATTGCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRILLMCDVEILFIIKIPLSHEM*KSHCKL Trigger: CAACTTGCAATGACTTTTCAACATTTCATGAGAGAG...CGGTATCTTGATTATAAACAGAATCTCCACATCACACATTAGCAATATGCGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS-3UTR CAA 90 bp | CAAATATTCTTAATTTCCTGGCTTCATAGAGATGGTCATCAACACAAGAAGCAATTCTTCTGCCATGTTTaGCAAAGGCTTCAAAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QIFLISWLHRDGHQHKKQFFCHV*QRLQKG Trigger: ACCTTTTTGAAGCCTTTGCAAAACATGGCAGAAGAA...TTGCTTCTTGTGTTGATGACCATCTCTATGAAGCCAGGAAATTAAGAATATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111134.2 |
||
| CDS GCA 72 bp | CAGAGCTCAGCCACGCGGCCCTTTCCCAAACCACCTTaGCCAGTAGGCAGCGATCACAGACTACGCCACGAC | + |
|
Preference number: 6 (lower is better) Translates to: QSSATRPFPKPP*PVGSDHRLRHD Trigger: GTCGTGGCGTAGTCTGTGATCGCTGCCTACTGGGCAAGGTGGTTTGGGAAAGGGCCGCGTGGCTGAGCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| CDS CAA 72 bp | CGCAGTGGAGCCACAGCACGCAGCCCGTTTCCCCGGTaGGCAGTCGTGAACTTTTCCACCTTCAGTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSGATARSPFPR*AVVNFSTFSAS Trigger: GGAGGCACTGAAGGTGGAAAAGTTCACGACTGCCAACCGGGGAAACGGGCTGCGTGCTGTGGCTCCACTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 ENSMUST00000194237.2 |
||
| CDS CAA 90 bp | TTTTCAGGCTCAGAGCTCAGCCACGCGGCCCTTTCCCAAACCACCTaGCCCAGTAGGCAGCGATCACAGACTACGCCACGACTCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSGSELSHAALSQTT*PSRQRSQTTPRLPL Trigger: CAAGGGGAGTCGTGGCGTAGTCTGTGATCGCTGCCTACTGGGCAAGGTGGTTTGGGAAAGGGCCGCGTGGCTGAGCTCTGAGCCTGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194237.2 |
||
| CDS GCA 72 bp | GTAGGCAGCGATCACAGACTACGCCACGACTCCCCTTaGACACAGTGTAAGCCAAGGGGTCGGAGCGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VGSDHRLRHDSP*TQCKPRGRSGR Trigger: TCTTCCGCTCCGACCCCTTGGCTTACACTGTGTGCAAGGGGAGTCGTGGCGTAGTCTGTGATCGCTGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 ENSMUST00000194237.2 |
||
| CDS TCA 72 bp | TGGCGTAGAACAACGCCTCCTCCAGCATCCCCAGGTTaGTGCAGGCATCCATGGCACAGTCGAGCACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WRRTTPPPASPG*CRHPWHSRAPS Trigger: TGAAGGTGCTCGACTGTGCCATGGATGCCTGCATCAACCTGGGGATGCTGGAGGAGGCGTTGTTCTACGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CAA 90 bp | ATAACCCTGCCCAGAAGTCTCACGGAGTCGGGCGGATATCTGGGCTaGCAGCTTTTAAGACAACTGCATTCCCGTCTGTGGTCCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ITLPRSLTESGGYLG*QLLRQLHSRLWSGQ Trigger: CTGGCCGGACCACAGACGGGAATGCAGTTGTCTTAAAAGCTGCAAGCCCAGATATCCGCCCGACTCCGTGAGACTTCTGGGCAGGGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
||
| CDS TCA 72 bp | TTTCCCGCACTGCACGCAGTAAGAGGTGGGGCCCGTTaGATACGATGGAGCAGTTGGGGTCACAGCTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FPALHAVRGGAR*IRWSSWGHSCD Trigger: ATCACAGCTGTGACCCCAACTGCTCCATCGTATTCAACGGGCCCCACCTCTTACTGCGTGCAGTGCGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS TCA 72 bp | CCTCGCTGGTCATCAGCATGTCCAGGTAGCAGATGGTaGGCTCCTCTCCTGCTTCAATTTCCCGCACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRWSSACPGSRW*APLLLQFPALH Trigger: GTGCAGTGCGGGAAATTGAAGCAGGAGAGGAGCTCACCATCTGCTACCTGGACATGCTGATGACCAGCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS GCA 72 bp | ATGCAGTCACACTCAAAGCAGTACTGGTCCCTCAGCTaGTTCCGGCGTTCCTCGCTGGTCATCAGCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MQSHSKQYWSLS*FRRSSLVISMS Trigger: GGACATGCTGATGACCAGCGAGGAACGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAGTGTGACTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CCA 72 bp | CCTGCTTCAATTTCCCGCACTGCACGCAGTAAGAGGTaGGGCCCGTTGAATACGATGGAGCAGTTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PASISRTARSKR*GPLNTMEQLGS Trigger: TGACCCCAACTGCTCCATCGTATTCAACGGGCCCCACCTCTTACTGCGTGCAGTGCGGGAAATTGAAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CAA 72 bp | CCCAGAAGTCTCACGGAGTCGGGCGGATATCTGGGCTaGCAGCTTTTAAGACAACTGCATTCCCGTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRSLTESGGYLG*QLLRQLHSRLW Trigger: CCACAGACGGGAATGCAGTTGTCTTAAAAGCTGCAAGCCCAGATATCCGCCCGACTCCGTGAGACTTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
||
| CDS GCA 72 bp | GCATGTCAGCATCCTTGTCCTGGGTTTGGCATCGGATaGAGTCACACTCAAAGCAGTACTGGTCCCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ACQHPCPGFGIG*SHTQSSTGPSA Trigger: AGCTGAGGGACCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGGATGCTGACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CAA 72 bp | GGGTACAGGCCAACGCCGACCTCCTGCATCTCCGCGTaGCAGATAGTGAACGAATTGCAGATCACTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GYRPTPTSCISA*QIVNELQITFA Trigger: TGCAAAAGTGATCTGCAATTCGTTCACTATCTGCAACGCGGAGATGCAGGAGGTCGGCGTTGGCCTGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS TCA 72 bp | CCGTTGAATACGATGGAGCAGTTGGGGTCACAGCTGTaGTTCAGCAAAGACATACTGGGGTACAGGCCAACG | + |
|
Preference number: 6 (lower is better) Translates to: PLNTMEQLGSQL*FSKDILGYRPT Trigger: CGTTGGCCTGTACCCCAGTATGTCTTTGCTGAATCACAGCTGTGACCCCAACTGCTCCATCGTATTCAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CCA 72 bp | TCACCCGTTAGCATGTCAGCATCCTTGTCCTGGGTTTaGCATCGGATGCAGTCACACTCAAAGCAGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPVSMSASLSWV*HRMQSHSKQYW Trigger: CCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGGATGCTGACATGCTAACGGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CAA 72 bp | GCCTTGATGGAGCTGCAGCTTGCCAACTTTCATCACTaGCACACCTCTGACGGGATGGCTTCCAGGGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALMELQLANFHH*HTSDGMASREK Trigger: TTTTTCCCTGGAAGCCATCCCGTCAGAGGTGTGCAAGTGATGAAAGTTGGCAAGCTGCAGCTCCATCAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CAA 90 bp | GACATACTGGGGTACAGGCCAACGCCGACCTCCTGCATCTCCGCGTaGCAGATAGTGAACGAATTGCAGATCACTTTTGCAAAGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: DILGYRPTPTSCISA*QIVNELQITFAKAS Trigger: TGAAGCCTTTGCAAAAGTGATCTGCAATTCGTTCACTATCTGCAACGCGGAGATGCAGGAGGTCGGCGTTGGCCTGTACCCCAGTATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CAA 90 bp | ACCTCCTTCCATATTTGCTCGTCACCCGTTAGCATGTCAGCATCCTaGTCCTGGGTTTGGCATCGGATGCAGTCACACTCAAAGCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: TSFHICSSPVSMSAS*SWVWHRMQSHSKQY Trigger: GTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGGATGCTGACATGCTAACGGGTGACGAGCAAATATGGAAGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS CAA 90 bp | GTCAAAGGCCAGCCTCAGGTTCTTCATGGCTTGAGGAAACATGCCTaGATGGAGCTGCAGCTTGCCAACTTTCATCACTTGCACACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VKGQPQVLHGLRKHA*MELQLANFHHLHTS Trigger: AGAGGTGTGCAAGTGATGAAAGTTGGCAAGCTGCAGCTCCATCAAGGCATGTTTCCTCAAGCCATGAAGAACCTGAGGCTGGCCTTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
||
| CDS TCA 72 bp | GCGGCAGCTGAGACGCATCCTGGATCTCCTCTCTCATaGAATGTTGAAAAGTCATTGCAAGTTGCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AAAETHPGSPLS*NVEKSLQVASG Trigger: GCCTGAGGCAACTTGCAATGACTTTTCAACATTTCATGAGAGAGGAGATCCAGGATGCGTCTCAGCTGCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
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| CDS GCA 72 bp | AGGCCAGCCTCAGGTTCTTCATGGCTTGAGGAAACATaGCTTGATGGAGCTGCAGCTTGCCAACTTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: RPASGSSWLEET*LDGAAACQLSS Trigger: TGATGAAAGTTGGCAAGCTGCAGCTCCATCAAGGCATGTTTCCTCAAGCCATGAAGAACCTGAGGCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| CDS CAA 72 bp | AGTTTCTCTGACTCTGAGGGCTTTTCATCCATCAGCTaGACGATAACCCTGCCCAGAAGTCTCACGGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SFSDSEGFSSIS*TITLPRSLTES Trigger: CGACTCCGTGAGACTTCTGGGCAGGGTTATCGTCAAGCTGATGGATGAAAAGCCCTCAGAGTCAGAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
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| CDS CAA 72 bp | CATATTTGCTCGTCACCCGTTAGCATGTCAGCATCCTaGTCCTGGGTTTGGCATCGGATGCAGTCACACTCA | + |
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Preference number: 6 (lower is better) Translates to: HICSSPVSMSAS*SWVWHRMQSHS Trigger: TGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGGATGCTGACATGCTAACGGGTGACGAGCAAATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| CDS CAA 72 bp | CATAATGTCAAAGGCCAGCCTCAGGTTCTTCATGGCTaGAGGAAACATGCCTTGATGGAGCTGCAGCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: HNVKGQPQVLHG*RKHALMELQLA Trigger: GGCAAGCTGCAGCTCCATCAAGGCATGTTTCCTCAAGCCATGAAGAACCTGAGGCTGGCCTTTGACATTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| CDS CAA 72 bp | CAGCCTCAGGTTCTTCATGGCTTGAGGAAACATGCCTaGATGGAGCTGCAGCTTGCCAACTTTCATCACTTG | + |
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Preference number: 6 (lower is better) Translates to: QPQVLHGLRKHA*MELQLANFHHL Trigger: CAAGTGATGAAAGTTGGCAAGCTGCAGCTCCATCAAGGCATGTTTCCTCAAGCCATGAAGAACCTGAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| CDS CAA 90 bp | AGGCGGCAGCTGAGACGCATCCTGGATCTCCTCTCTCATGAAATGTaGAAAAGTCATTGCAAGTTGCCTCAGGCCCTCTTTCTTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RRQLRRILDLLSHEM*KSHCKLPQALFLIF Trigger: GAAGATAAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTTTCAACATTTCATGAGAGAGGAGATCCAGGATGCGTCTCAGCTGCCGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
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| CDS CAA 90 bp | GGTCACTTTCATAATGTCAAAGGCCAGCCTCAGGTTCTTCATGGCTaGAGGAAACATGCCTTGATGGAGCTGCAGCTTGCCAACTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GHFHNVKGQPQVLHG*RKHALMELQLANFH Trigger: ATGAAAGTTGGCAAGCTGCAGCTCCATCAAGGCATGTTTCCTCAAGCCATGAAGAACCTGAGGCTGGCCTTTGACATTATGAAAGTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128302.8 |
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| CDS CAA 72 bp | CTGAGACGCATCCTGGATCTCCTCTCTCATGAAATGTaGAAAAGTCATTGCAAGTTGCCTCAGGCCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LRRILDLLSHEM*KSHCKLPQALF Trigger: AAAGAGGGCCTGAGGCAACTTGCAATGACTTTTCAACATTTCATGAGAGAGGAGATCCAGGATGCGTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
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| CDS GCA 72 bp | CTGGATCTCCTCTCTCATGAAATGTTGAAAAGTCATTaGAAGTTGCCTCAGGCCCTCTTTCTTATCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LDLLSHEMLKSH*KLPQALFLIFS Trigger: ACTGAAGATAAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTTTCAACATTTCATGAGAGAGGAGATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
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| CDS CAA 90 bp | ATCCTGGATCTCCTCTCTCATGAAATGTTGAAAAGTCATTGCAAGTaGCCTCAGGCCCTCTTTCTTATCTTCAGTGAGTTTGCTAATATT | + |
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Preference number: 6 (lower is better) Translates to: ILDLLSHEMLKSHCK*PQALFLIFSEFANI Trigger: AATATTAGCAAACTCACTGAAGATAAGAAAGAGGGCCTGAGGCAACTTGCAATGACTTTTCAACATTTCATGAGAGAGGAGATCCAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111134.2 ENSMUST00000128302.8 |
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