Pregenerated sensors for SMYD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026603Ensembl transcript IDs: ENSMUST00000027897.8
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCTCTAAAGCTCAATCTGCCGAAAATATATATTCTGTGAACTCATaGCATGGCCTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAG | + |
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Preference number: 1 (lower is better) Translates to: ISKAQSAENIYSVNS*HGLGEKASTGNELK Trigger: CTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAGGCCATGGCATGAGTTCACAGAATATATATTTTCGGCAGATTGAGCTTTAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| 3UTR-3UTR TCA 90 bp | TATATATTCTGTGAACTCATGCCATGGCCTTGGAGAGAAGGCAAGCACTGGAAATGCAGAGGGCTGGGGTaGCCCGTGAGGTCGGAAATA | + |
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Preference number: 2 (lower is better) Translates to: YIFCELMPWPWREGKHWKCRGLG*PVRSEI Trigger: TATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCA...TTTCCAGTGCTTGCCTTCTCTCCAAGGCCATGGCATGAGTTCACAGAATATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACAATACTCAAGTCCTGTaGGTGAGGTCGCAGACGGAA | + |
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Preference number: 2 (lower is better) Translates to: LERRQALEMNSRSELNVNNTQVL*VRSQTE Trigger: TTCCGTCTGCGACCTCACTCACAGGACTTGAGTATT...GTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | CACGGCAAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAAGGAGCCCCCGGCCCTTaGCCGCACTGCAGAAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: HGKALQRAGVTREVGNTQGAPGP*PHCRSA Trigger: AGCGCTTCTGCAGTGCGGGCAAGGGCCGGGGGCTCC...TTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTTGCCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | TATTCTGTGAACTCATGCCATGGCCTTGGAGAGAAGGCAAGCACTGGAAATGAAGGCCCTTGCCCGCACTaGAGAAGCGCTCCAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YSVNSCHGLGEKASTGNEGPCPH*RSAPGR Trigger: GCGGCCTGGAGCGCTTCTGCAGTGCGGGCAAGGGCC...TTCATTTCCAGTGCTTGCCTTCTCTCCAAGGCCATGGCATGAGTTCACAGAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGAAACAGCACTCGCAGTGGTaGCCCCGCTCGCCCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: RRQALEMNSRSELNVNLKQHSQW*PRSPTV Trigger: CACCGTGGGCGAGCGGGGCCACCACTGCGAGTGCTG...TTTCAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | CACGGCAAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAAGGGATTTGTAGTGTTTaGCCCTCCGGAACTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HGKALQRAGVTREVGNTQGICSV*PSGTPR Trigger: TCGAGGAGTTCCGGAGGGCCAAACACTACAAATCCC...TTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTTGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAAGTCCTGGAGCTCATCTTCTCCTaGCTAAGCTCGCAGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: KALQRAGVTREVGNTQVLELIFS*LSSQIS Trigger: GGAGATCTGCGAGCTTAGCCAGGAGAAGATGAGCTC...CAGGACTTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAAGTCCTGGCGGCGATGTCACTCTaGATGAGATCTTTCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: KALQRAGVTREVGNTQVLAAMSL*MRSFFS Trigger: CGAGAAGAAAGATCTCATCCAGAGTGACATCGCCGC...CAGGACTTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | AAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAAGTCCTGGCCTGGTACATCATGTaGAGCATGTACACATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KALQRAGVTREVGNTQVLAWYIM*SMYTLL Trigger: CAGCAATGTGTACATGCTGCACATGATGTACCAGGC...CAGGACTTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAAGTCCTGTTCGGACTTCCACCTTaGCTTTGTCCTTATCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KALQRAGVTREVGNTQVLFGLPP*LCPYPW Trigger: CCAAGGATAAGGACAAAGCCAAGGTGGAAGTCCGAA...CAGGACTTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGAAAGATGGCTTCTGCCTGTaGCGGGCTGCTGAGCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: RRQALEMNSRSELNVNLKDGFCL*RAAELS Trigger: CGAAAGCTCAGCAGCCCGCCACAGGCAGAAGCCATC...TTTCAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCAGAATTCTTGCTGTaGGCCGCACAGTCTCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: LGEKASTGNELKVRAEREPEFLL*AAQSPK Trigger: CTTCGGAGACTGTGCGGCTCACAGCAAGAATTCTGG...TTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAATCTCCTGTACAGCTCTaGCTTCTGCCAGGGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGEKASTGNELKVRAERESPVQL*LLPGSL Trigger: AAGGGACCCTGGCAGAAGTCAGAGCTGTACAGGAGA...TTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | AACTCATGCCATGGCCTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCCGTGAGCTACCTCCATaGTGGCAATGGCCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: NSCHGLGEKASTGNELKVRELPP*WQWPSS Trigger: TGAAGAAGGCCATTGCCATCATGGAGGTAGCTCACG...GACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAGGCCATGGCATGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | CCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAAACCTCGTCTCCTGGGTaGATCTCCTGTACAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PTGTEGKVVASLKLNLPKTSSPG*ISCTAL Trigger: CAGAGCTGTACAGGAGATCCACCCAGGAGACGAGGT...TTTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | CCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAACAGACGCCCATGGCCTaGTACATCATGTGCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: PTGTEGKVVASLKLNLPKQTPMA*YIMCSM Trigger: CATGCTGCACATGATGTACCAGGCCATGGGCGTCTG...TTTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | CCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAAACAGGCAGACGCCCATaGCCTGGTACATCATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PTGTEGKVVASLKLNLPKTGRRP*PGTSCA Trigger: TGCACATGATGTACCAGGCCATGGGCGTCTGCCTGT...TTTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | GAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGGCACCGTCCACATTTTaGCAATCCTTCTTTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ERRQALEMNSRSELNVNLAPSTF*QSFFPG Trigger: GCCAGGAAAGAAGGATTGTCAAAATGTGGACGGTGC...CAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | GAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGCTCGATGACATTGCGTaGGTATCTGACCATGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: ERRQALEMNSRSELNVNLLDDIA*VSDHVS Trigger: CGAGACATGGTCAGATACGCACGCAATGTCATCGAG...CAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | GAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGGGTGTCCTCTCTGGGTaGATTTTCTGTTTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ERRQALEMNSRSELNVNLGVLSG*IFCLAR Trigger: TCTGGCCAAACAGAAAATCCACCCAGAGAGGACACC...CAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAAAGCCAACAATTTCTCTaGAGGTGTCCTCTCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGEKASTGNELKVRAERESQQFL*RCPLWV Trigger: CACCCAGAGAGGACACCTTCAGAGAAATTGTTGGCT...TTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | TCCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAACTTTGTAGGTCACAATaGCATTCGGGCAGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SYRHRGKSRCISKAQSAELCRSQ*HSGSSC Trigger: ACAGCTGCTGCCCGAATGTCATTGTGACCTACAAAG...TTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | CTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAAGCAGCATGTACACATTaGTGTCCTCAAACACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LGEKASTGNELKVRAEREAACTH*CPQTRS Trigger: GCTCCGTGTTTGAGGACAGCAATGTGTACATGCTGC...TTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | TCCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAGGCTTAATGATCTTCTaGCCGTATTTCAGGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SYRHRGKSRCISKAQSAEGLMIF*PYFRAP Trigger: GGGAGCCCTGAAATACGGGCAGAAGATCATTAAGCC...TTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | TACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAAATCATTGCGTGCGTATCTaGCCATGTCTCGGATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: YRHRGKSRCISKAQSAENHCVRI*PCLGWL Trigger: AAGCCATCCGAGACATGGTCAGATACGCACGCAATG...ATTTTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGAAACCCCCAAAACAACCATaGAGGAGCATTCCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RRQALEMNSRSELNVNLKPPKQP*RSIPAC Trigger: ACAAGCTGGAATGCTCCTCCATGGTTGTTTTGGGGG...TTTCAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGAAGGAATTCCAGGTACTTaGAGTAGAACTGGTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: EKASTGNELKVRAEREPEGIPGT*SRTGGE Trigger: CTCTCCACCAGTTCTACTCCAAGTACCTGGAATTCC...TTCAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACGATGTCACTCTGGATaGGATCTTTCTTCTCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LGEKASTGNELKVRAERERCHSG*DLSSRC Trigger: ACAACGAGAAGAAAGATCTCATCCAGAGTGACATCG...TTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGAAATTCGGGCAGCAGCTGTaGTTCATCAATGCAACATCA | + |
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Preference number: 4 (lower is better) Translates to: RRQALEMNSRSELNVNLKFGQQL*FINATS Trigger: TGATGTTGCATTGATGAATCACAGCTGCTGCCCGAA...TTTCAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR TCA 90 bp | GAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGTCTCAATCTCCTGCTTaGTTTCAGAGATGTACGGAT | + |
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Preference number: 4 (lower is better) Translates to: ERRQALEMNSRSELNVNLSQSPA*FQRCTD Trigger: ATCCGTACATCTCTGAAATCAAGCAGGAGATTGAGA...CAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | TATATATTCTGTGAACTCATGCCATGGCCTTGGAGAGAAGGCAAGCACTGGAAATACAGCTCTGACTTCTaGCAGGGTCCCTTTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: YIFCELMPWPWREGKHWKYSSDF*QGPFVG Trigger: ACCTACAAAGGGACCCTGGCAGAAGTCAGAGCTGTA...TTTCCAGTGCTTGCCTTCTCTCCAAGGCCATGGCATGAGTTCACAGAATATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR GCA 90 bp | TCCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAGCTGTGATTCATCAATaGAACATCAGGGAATATCGC | + |
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Preference number: 4 (lower is better) Translates to: SYRHRGKSRCISKAQSAEAVIHQ*NIREYR Trigger: GCGATATTCCCTGATGTTGCATTGATGAATCACAGC...TTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | CCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAACGGAGCCCCCGGCCCTaGCCCGCACTGCAGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PTGTEGKVVASLKLNLPKRSPRP*PALQKR Trigger: GCGCTTCTGCAGTGCGGGCAAGGGCCGGGGGCTCCG...TTTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 90 bp | CTCGATGACATTGCGTGCGTATCTGACCATGTCTCGGATGGCTTCTaGCTGTGGCGGGCTGCTGAGCTTTCGGACTTCCACCTTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LDDIACVSDHVSDGF*LWRAAELSDFHLGF Trigger: AAAGCCAAGGTGGAAGTCCGAAAGCTCAGCAGCCCGCCACAGGCAGAAGCCATCCGAGACATGGTCAGATACGCACGCAATGTCATCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 90 bp | GGATTTGTAGTGTTTGGCCCTCCGGAACTCCTCGATGACATTGCGTaGGTATCTGACCATGTCTCGGATGGCTTCTGCCTGTGGCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GFVVFGPPELLDDIA*VSDHVSDGFCLWRA Trigger: AGCCCGCCACAGGCAGAAGCCATCCGAGACATGGTCAGATACGCACGCAATGTCATCGAGGAGTTCCGGAGGGCCAAACACTACAAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 90 bp | GGCTTAATGATCTTCTGCCCGTATTTCAGGGCTCCCTCCCAGTCCTaGATGTACAGGCAGACGCCCATGGCCTGGTACATCATGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GLMIFCPYFRAPSQS*MYRQTPMAWYIMCS Trigger: GCTGCACATGATGTACCAGGCCATGGGCGTCTGCCTGTACATGCAGGACTGGGAGGGAGCCCTGAAATACGGGCAGAAGATCATTAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 90 bp | GACATTGCGTGCGTATCTGACCATGTCTCGGATGGCTTCTGCCTGTaGCGGGCTGCTGAGCTTTCGGACTTCCACCTTGGCTTTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: DIACVSDHVSDGFCL*RAAELSDFHLGFVL Trigger: AAGGACAAAGCCAAGGTGGAAGTCCGAAAGCTCAGCAGCCCGCCACAGGCAGAAGCCATCCGAGACATGGTCAGATACGCACGCAATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 90 bp | AGGGCTCCCTCCCAGTCCTGCATGTACAGGCAGACGCCCATGGCCTaGTACATCATGTGCAGCATGTACACATTGCTGTCCTCAAACACG | + |
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Preference number: 5 (lower is better) Translates to: RAPSQSCMYRQTPMA*YIMCSMYTLLSSNT Trigger: CGTGTTTGAGGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGGCGTCTGCCTGTACATGCAGGACTGGGAGGGAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | CACGGCAAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAATGTCCTTATCCTTGGTaGTACACTCCCGGCACTCAC | + |
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Preference number: 5 (lower is better) Translates to: HGKALQRAGVTREVGNTQCPYPW*YTPGTH Trigger: GTGAGTGCCGGGAGTGTACAACCAAGGATAAGGACA...TTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTTGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 90 bp | ATTTCAGGGCTCCCTCCCAGTCCTGCATGTACAGGCAGACGCCCATaGCCTGGTACATCATGTGCAGCATGTACACATTGCTGTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: ISGLPPSPACTGRRP*PGTSCAACTHCCPQ Trigger: TTGAGGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGGCGTCTGCCTGTACATGCAGGACTGGGAGGGAGCCCTGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | CACGGCAAGGCTTTGCAGAGGGCTGGGGTGACCCGTGAGGTCGGAAATACTCAATGCACCGTCCACATTTaGACAATCCTTCTTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HGKALQRAGVTREVGNTQCTVHI*TILLSW Trigger: CCAGGAAAGAAGGATTGTCAAAATGTGGACGGTGCA...TTGAGTATTTCCGACCTCACGGGTCACCCCAGCCCTCTGCAAAGCCTTGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 90 bp | GCCAGTCTTCCTTCTGACATTCCACGTCGCAGTAGAACGCCTGCTTaGACCGTCCACATTTTGACAATCCTTCTTTCCTGGCGAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASLPSDIPRRSRTPA*TVHILTILLSWRSS Trigger: GCTGCTTCGCCAGGAAAGAAGGATTGTCAAAATGTGGACGGTGCAAGCAGGCGTTCTACTGCGACGTGGAATGTCAGAAGGAAGACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 90 bp | CAGTCCTGCATGTACAGGCAGACGCCCATGGCCTGGTACATCATGTaGAGCATGTACACATTGCTGTCCTCAAACACGGAGCTCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: QSCMYRQTPMAWYIM*SMYTLLSSNTELIF Trigger: GAAGATGAGCTCCGTGTTTGAGGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGGCGTCTGCCTGTACATGCAGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 90 bp | TGGGAGAGCTCTTCATCTTCAATAGTGAAGCCATTACAGTTCACCTaGGCGAAGAGCACCACGAGACTGCTGTGGTCAGGGAATTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: WESSSSSIVKPLQFT*AKSTTRLLWSGNSR Trigger: CCTGGAATTCCCTGACCACAGCAGTCTCGTGGTGCTCTTCGCCCAGGTGAACTGTAATGGCTTCACTATTGAAGATGAAGAGCTCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 90 bp | AACTCCCTCACAGCCAACAATTTCTCTGAAGGTGTCCTCTCTGGGTaGATTTTCTGTTTGGCCAGAATTCTTGCTGTGAGCCGCACAGTC | + |
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Preference number: 5 (lower is better) Translates to: NSLTANNFSEGVLSG*IFCLARILAVSRTV Trigger: GACTGTGCGGCTCACAGCAAGAATTCTGGCCAAACAGAAAATCCACCCAGAGAGGACACCTTCAGAGAAATTGTTGGCTGTGAGGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | TCCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAGCTTTGTCCTTATCCTaGGTTGTACACTCCCGGCAC | + |
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Preference number: 5 (lower is better) Translates to: SYRHRGKSRCISKAQSAEALSLS*VVHSRH Trigger: GTGCCGGGAGTGTACAACCAAGGATAAGGACAAAGC...TTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS TCA 90 bp | GGTACTTGGAGTAGAACTGGTGGAGAGCGGCGATGTCACTCTGGATaGGATCTTTCTTCTCGTTGTCTAGCTTGTCCAGATGTGACTCAA | + |
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Preference number: 5 (lower is better) Translates to: GTWSRTGGERRCHSG*DLSSRCLACPDVTQ Trigger: TTGAGTCACATCTGGACAAGCTAGACAACGAGAAGAAAGATCTCATCCAGAGTGACATCGCCGCTCTCCACCAGTTCTACTCCAAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGAATGCAGCATGTACACATaGCTGTCCTCAAACACGGAG | + |
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Preference number: 5 (lower is better) Translates to: EKASTGNELKVRAEREPECSMYT*LSSNTE Trigger: CTCCGTGTTTGAGGACAGCAATGTGTACATGCTGCA...TTCAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | TTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACGGGTGGATTTTCTGTTaGGCCAGAATTCTTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LERRQALEMNSRSELNVNGWIFC*ARILAV Trigger: CACAGCAAGAATTCTGGCCAAACAGAAAATCCACCC...GTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | TATTCTGTGAACTCATGCCATGGCCTTGGAGAGAAGGCAAGCACTGGAAATGAAAACTCCTCGATGACATaGCGTGCGTATCTGACCATG | + |
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Preference number: 5 (lower is better) Translates to: YSVNSCHGLGEKASTGNENSSMT*RAYLTM Trigger: CATGGTCAGATACGCACGCAATGTCATCGAGGAGTT...TTCATTTCCAGTGCTTGCCTTCTCTCCAAGGCCATGGCATGAGTTCACAGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAACCTGAAACGTTCCTGTCTTCTGTaGGATATAGCAGGTCGATGT | + |
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Preference number: 5 (lower is better) Translates to: RRQALEMNSRSELNVNLKRSCLL*DIAGRC Trigger: ACATCGACCTGCTATATCCAACAGAAGACAGGAACG...TTTCAGGTTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | CTTGGAGAGAAGGCAAGCACTGGAAATGAACTCAAGGTCAGAGCTGAACGTGAAACTTCCACCTTGGCTTaGTCCTTATCCTTGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LGEKASTGNELKVRAERETSTLA*SLSLVV Trigger: TACAACCAAGGATAAGGACAAAGCCAAGGTGGAAGT...TTCACGTTCAGCTCTGACCTTGAGTTCATTTCCAGTGCTTGCCTTCTCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | TCCTACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAACTCTCAATCTCCTGCTaGATTTCAGAGATGTACGGA | + |
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Preference number: 5 (lower is better) Translates to: SYRHRGKSRCISKAQSAELSISC*ISEMYG Trigger: TCCGTACATCTCTGAAATCAAGCAGGAGATTGAGAG...TTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS-3UTR CAA 90 bp | TACAGGCACAGAGGGAAAAGTCGTTGCATCTCTAAAGCTCAATCTGCCGAAAATTTTCGGACTTCCACCTaGGCTTTGTCCTTATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: YRHRGKSRCISKAQSAENFRTST*ALSLSL Trigger: CAAGGATAAGGACAAAGCCAAGGTGGAAGTCCGAAA...ATTTTCGGCAGATTGAGCTTTAGAGATGCAACGACTTTTCCCTCTGTGCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS TCA 72 bp | AGCAGCACTCGCAGTGGTGGCCCCGCTCGCCCACGGTaGGCACGCAGGCGTAGGCCGGGCAGGAGAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSTRSGGPARPR*ARRRRPGRRRG Trigger: TCCTCTTCTCCTGCCCGGCCTACGCCTGCGTGCTCACCGTGGGCGAGCGGGGCCACCACTGCGAGTGCTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 72 bp | GACAATCCTTCTTTCCTGGCGAAGCAGCACTCGCAGTaGTGGCCCCGCTCGCCCACGGTGAGCACGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: DNPSFLAKQHSQ*WPRSPTVSTQA Trigger: CGCCTGCGTGCTCACCGTGGGCGAGCGGGGCCACCACTGCGAGTGCTGCTTCGCCAGGAAAGAAGGATTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 72 bp | TGCGTATCTGACCATGTCTCGGATGGCTTCTGCCTGTaGCGGGCTGCTGAGCTTTCGGACTTCCACCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: CVSDHVSDGFCL*RAAELSDFHLG Trigger: GCCAAGGTGGAAGTCCGAAAGCTCAGCAGCCCGCCACAGGCAGAAGCCATCCGAGACATGGTCAGATACGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 72 bp | ATTGCGTGCGTATCTGACCATGTCTCGGATGGCTTCTaGCTGTGGCGGGCTGCTGAGCTTTCGGACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: IACVSDHVSDGF*LWRAAELSDFH Trigger: GTGGAAGTCCGAAAGCTCAGCAGCCCGCCACAGGCAGAAGCCATCCGAGACATGGTCAGATACGCACGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 72 bp | ATCTTCTGCCCGTATTTCAGGGCTCCCTCCCAGTCCTaGATGTACAGGCAGACGCCCATGGCCTGGTACATC | + |
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Preference number: 6 (lower is better) Translates to: IFCPYFRAPSQS*MYRQTPMAWYI Trigger: GATGTACCAGGCCATGGGCGTCTGCCTGTACATGCAGGACTGGGAGGGAGCCCTGAAATACGGGCAGAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 72 bp | GCCTGTGGCGGGCTGCTGAGCTTTCGGACTTCCACCTaGGCTTTGTCCTTATCCTTGGTTGTACACTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: ACGGLLSFRTST*ALSLSLVVHSR Trigger: CCGGGAGTGTACAACCAAGGATAAGGACAAAGCCAAGGTGGAAGTCCGAAAGCTCAGCAGCCCGCCACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS TCA 72 bp | CCATGTCTCGGATGGCTTCTGCCTGTGGCGGGCTGCTaGGCTTTCGGACTTCCACCTTGGCTTTGTCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: PCLGWLLPVAGC*AFGLPPWLCPY Trigger: ATAAGGACAAAGCCAAGGTGGAAGTCCGAAAGCTCAGCAGCCCGCCACAGGCAGAAGCCATCCGAGACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 72 bp | GTGTTTGGCCCTCCGGAACTCCTCGATGACATTGCGTaGGTATCTGACCATGTCTCGGATGGCTTCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VFGPPELLDDIA*VSDHVSDGFCL Trigger: CAGGCAGAAGCCATCCGAGACATGGTCAGATACGCACGCAATGTCATCGAGGAGTTCCGGAGGGCCAAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 72 bp | CTCCCTCCCAGTCCTGCATGTACAGGCAGACGCCCATaGCCTGGTACATCATGTGCAGCATGTACACATTGC | + |
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Preference number: 6 (lower is better) Translates to: LPPSPACTGRRP*PGTSCAACTHC Trigger: GCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGGCGTCTGCCTGTACATGCAGGACTGGGAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 72 bp | GGCGGGCTGCTGAGCTTTCGGACTTCCACCTTGGCTTaGTCCTTATCCTTGGTTGTACACTCCCGGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: GGLLSFRTSTLA*SLSLVVHSRHS Trigger: TGAGTGCCGGGAGTGTACAACCAAGGATAAGGACAAAGCCAAGGTGGAAGTCCGAAAGCTCAGCAGCCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 72 bp | GCAATGGCCTTCTTCAGGGCCTTCTCGCCGGCCGCTTaGTTTTCCAGACCCATGTACAGTCTTCCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AMAFFRAFSPAA*FSRPMYSLPSF Trigger: GAAGCTGGGAAGACTGTACATGGGTCTGGAAAACAAAGCGGCCGGCGAGAAGGCCCTGAAGAAGGCCATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 90 bp | TCCATGATGGCAATGGCCTTCTTCAGGGCCTTCTCGCCGGCCGCTTaGTTTTCCAGACCCATGTACAGTCTTCCCAGCTTCAGCCACATG | + |
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Preference number: 6 (lower is better) Translates to: SMMAMAFFRAFSPAA*FSRPMYSLPSFSHM Trigger: CATGTGGCTGAAGCTGGGAAGACTGTACATGGGTCTGGAAAACAAAGCGGCCGGCGAGAAGGCCCTGAAGAAGGCCATTGCCATCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS TCA 72 bp | ACAGTCTTCCCAGCTTCAGCCACATGGAAGCCACGTTaGGGGAGTACACGGGGTAGTGCTTACTGTACGGCT | + |
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Preference number: 6 (lower is better) Translates to: TVFPASATWKPR*GSTRGSAYCTA Trigger: AGCCGTACAGTAAGCACTACCCCGTGTACTCCCTCAACGTGGCTTCCATGTGGCTGAAGCTGGGAAGACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 72 bp | TCCCAGTCCTGCATGTACAGGCAGACGCCCATGGCCTaGTACATCATGTGCAGCATGTACACATTGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SQSCMYRQTPMA*YIMCSMYTLLS Trigger: GGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGGCGTCTGCCTGTACATGCAGGACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 72 bp | CGTCGCAGTAGAACGCCTGCTTGCACCGTCCACATTTaGACAATCCTTCTTTCCTGGCGAAGCAGCACTCGC | + |
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Preference number: 6 (lower is better) Translates to: RRSRTPACTVHI*TILLSWRSSTR Trigger: GCGAGTGCTGCTTCGCCAGGAAAGAAGGATTGTCAAAATGTGGACGGTGCAAGCAGGCGTTCTACTGCGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 90 bp | AGGCAGACGCCCATGGCCTGGTACATCATGTGCAGCATGTACACATaGCTGTCCTCAAACACGGAGCTCATCTTCTCCTGGCTAAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RQTPMAWYIMCSMYT*LSSNTELIFSWLSS Trigger: CGAGCTTAGCCAGGAGAAGATGAGCTCCGTGTTTGAGGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGGCGTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS TCA 72 bp | GTCGCAGTAGAACGCCTGCTTGCACCGTCCACATTTTaGCAATCCTTCTTTCCTGGCGAAGCAGCACTCGCA | + |
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Preference number: 6 (lower is better) Translates to: VAVERLLAPSTF*QSFFPGEAALA Trigger: TGCGAGTGCTGCTTCGCCAGGAAAGAAGGATTGTCAAAATGTGGACGGTGCAAGCAGGCGTTCTACTGCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 72 bp | ACATTGCTGTCCTCAAACACGGAGCTCATCTTCTCCTaGCTAAGCTCGCAGATCTCCAGCAGCTCACTAGGG | + |
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Preference number: 6 (lower is better) Translates to: TLLSSNTELIFS*LSSQISSSSLG Trigger: CCCTAGTGAGCTGCTGGAGATCTGCGAGCTTAGCCAGGAGAAGATGAGCTCCGTGTTTGAGGACAGCAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 72 bp | CATTACAGTTCACCTGGGCGAAGAGCACCACGAGACTaGTGTGGTCAGGGAATTCCAGGTACTTGGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HYSSPGRRAPRD*CGQGIPGTWSR Trigger: TCTACTCCAAGTACCTGGAATTCCCTGACCACAGCAGTCTCGTGGTGCTCTTCGCCCAGGTGAACTGTAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 72 bp | CCATGGCCTGGTACATCATGTGCAGCATGTACACATTaGTGTCCTCAAACACGGAGCTCATCTTCTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PWPGTSCAACTH*CPQTRSSSSPG Trigger: GCCAGGAGAAGATGAGCTCCGTGTTTGAGGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 72 bp | ATGTACAGGCAGACGCCCATGGCCTGGTACATCATGTaGAGCATGTACACATTGCTGTCCTCAAACACGGAG | + |
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Preference number: 6 (lower is better) Translates to: MYRQTPMAWYIM*SMYTLLSSNTE Trigger: CTCCGTGTTTGAGGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGGCGTCTGCCTGTACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 72 bp | CCCATGGCCTGGTACATCATGTGCAGCATGTACACATaGCTGTCCTCAAACACGGAGCTCATCTTCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PMAWYIMCSMYT*LSSNTELIFSW Trigger: CCAGGAGAAGATGAGCTCCGTGTTTGAGGACAGCAATGTGTACATGCTGCACATGATGTACCAGGCCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS TCA 72 bp | TGCTTGATTTCAGAGATGTACGGATGGTCCTTGCCGTaGGCTACCTCCATGATGGCAATGGCCTTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CLISEMYGWSLP*ATSMMAMAFFR Trigger: CCTGAAGAAGGCCATTGCCATCATGGAGGTAGCTCACGGCAAGGACCATCCGTACATCTCTGAAATCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS GCA 72 bp | CCTTCTGACATTCCACGTCGCAGTAGAACGCCTGCTTaGACCGTCCACATTTTGACAATCCTTCTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSDIPRRSRTPA*TVHILTILLSW Trigger: CCAGGAAAGAAGGATTGTCAAAATGTGGACGGTGCAAGCAGGCGTTCTACTGCGACGTGGAATGTCAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CCA 72 bp | TCTTCATCTTCAATAGTGAAGCCATTACAGTTCACCTaGGCGAAGAGCACCACGAGACTGCTGTGGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSSSIVKPLQFT*AKSTTRLLWSG Trigger: CCCTGACCACAGCAGTCTCGTGGTGCTCTTCGCCCAGGTGAACTGTAATGGCTTCACTATTGAAGATGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 72 bp | GCGGCGATGTCACTCTGGATGAGATCTTTCTTCTCGTaGTCTAGCTTGTCCAGATGTGACTCAAACTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: AAMSLWMRSFFS*SSLSRCDSNSL Trigger: GAGGGAGTTTGAGTCACATCTGGACAAGCTAGACAACGAGAAGAAAGATCTCATCCAGAGTGACATCGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS TCA 72 bp | AGTAGAACTGGTGGAGAGCGGCGATGTCACTCTGGATaGGATCTTTCTTCTCGTTGTCTAGCTTGTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SRTGGERRCHSG*DLSSRCLACPD Trigger: ATCTGGACAAGCTAGACAACGAGAAGAAAGATCTCATCCAGAGTGACATCGCCGCTCTCCACCAGTTCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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| CDS CAA 90 bp | GCGGCGATGTCACTCTGGATGAGATCTTTCTTCTCGTTGTCTAGCTaGTCCAGATGTGACTCAAACTCCCTCACAGCCAACAATTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: AAMSLWMRSFFSLSS*SRCDSNSLTANNFS Trigger: AGAGAAATTGTTGGCTGTGAGGGAGTTTGAGTCACATCTGGACAAGCTAGACAACGAGAAGAAAGATCTCATCCAGAGTGACATCGCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027897.8 |
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