Pregenerated sensors for SMYD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055027Ensembl transcript IDs: ENSMUST00000074301.10, ENSMUST00000114186.9, ENSMUST00000114188.3, ENSMUST00000129630.3, ENSMUST00000173297.2, ENSMUST00000173730.2
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGTGCTGGAGAAACGATGGGAACACGAGGGGAGCCATGGGCTGTaGTGGAGCCTGGTGCTCGCCCCACATTCAGGAAACGCCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: EVLEKRWEHEGSHGL*WSLVLAPHSGNASC Trigger: GCAGCTGGCGTTTCCTGAATGTGGGGCGAGCACCAGGCTCCATCACAGCCCATGGCTCCCCTCGTGTTCCCATCGTTTCTCCAGCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR CCA 90 bp | ACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTaGGATTCTAGGTACCTGCCACTCTTAGCTCAGGTGTTACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: TSSPRDAYTDTQAVT*DSRYLPLLAQVLPP Trigger: TGGGGGTAACACCTGAGCTAAGAGTGGCAGGTACCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| 3UTR TCA 90 bp | GAAGTCAGCCTCCAAGTAAATGAGAGCAAACTGGCCACTCTCCAATaGGATCCAGGCCAGGTGAACTGCCTTACGAAAGGGGAGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: EVSLQVNESKLATLQ*DPGQVNCLTKGEKP Trigger: GGGCTTCTCCCCTTTCGTAAGGCAGTTCACCTGGCCTGGATCTCATTGGAGAGTGGCCAGTTTGCTCTCATTTACTTGGAGGCTGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR CCA 90 bp | ACAATACAACCCAGTCAGAGTGGTACACGCCTAGGATCCAGCACTTaGGACGAACAGGCAGGAAGATCACAAGTTCAAGGGCATCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: TIQPSQSGTRLGSST*DEQAGRSQVQGHPL Trigger: GAGAGGATGCCCTTGAACTTGTGATCTTCCTGCCTGTTCGTCCCAAGTGCTGGATCCTAGGCGTGTACCACTCTGACTGGGTTGTATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR TCA 90 bp | TTCTTGGGCCTTCATTTCTCAGCTGGAAGTCAGCCTCCAAGTAAATaGGAGCAAACTGGCCACTCTCCAATGAGATCCAGGCCAGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: FLGLHFSAGSQPPSK*EQTGHSPMRSRPGE Trigger: TTCACCTGGCCTGGATCTCATTGGAGAGTGGCCAGTTTGCTCTCATTTACTTGGAGGCTGACTTCCAGCTGAGAAATGAAGGCCCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR CCA 90 bp | TTCAGAATTAAATACTACTTAGACGACAATACAACCCAGTCAGAGTaGTACACGCCTAGGATCCAGCACTTGGGACGAACAGGCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: FRIKYYLDDNTTQSE*YTPRIQHLGRTGRK Trigger: CTTCCTGCCTGTTCGTCCCAAGTGCTGGATCCTAGGCGTGTACCACTCTGACTGGGTTGTATTGTCGTCTAAGTAGTATTTAATTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR TCA 90 bp | AAAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTaGGTATATCTCAAAGGGTCAAACACTTTTGGCCTGAGGATTCAG | + |
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Preference number: 1 (lower is better) Translates to: KDHRIPRSLHLSRHH*VYLKGSNTFGLRIQ Trigger: CTGAATCCTCAGGCCAAAAGTGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR CCA 90 bp | TGGGTCCATCACTGGCAGGCATGCACAGTCAGCTTTACAAGTCAATaGCCAGGAAAAACTCAGCTTTTCTTCAACATCATAAAGAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: WVHHWQACTVSFTSQ*PGKTQLFFNIIKSY Trigger: GTAGCTCTTTATGATGTTGAAGAAAAGCTGAGTTTTTCCTGGCCATTGACTTGTAAAGCTGACTGTGCATGCCTGCCAGTGATGGACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR CCA 90 bp | TACACTCTGCAAATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATaGTCAAGGCCTCACCATAGTTCTCTTCCTCAGATCTTTAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: YTLQIKCFVGKSFWP*SRPHHSSLPQIFKE Trigger: CTCTTTAAAGATCTGAGGAAGAGAACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTATTTGCAGAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR CCA 90 bp | CTTTCTAGCACAATTATATTTGGGGCTCCCTTATTAAATAGATGGTaGGATCTAGCACCTGACACATGTAGGAAGAGTTGGTCTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: LSSTIIFGAPLLNRW*DLAPDTCRKSWSEM Trigger: CATTTCAGACCAACTCTTCCTACATGTGTCAGGTGCTAGATCCCACCATCTATTTAATAAGGGAGCCCCAAATATAATTGTGCTAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| 3UTR CCA 90 bp | TTTCTTTCTAGCACAATTATATTTGGGGCTCCCTTATTAAATAGATaGTGGGATCTAGCACCTGACACATGTAGGAAGAGTTGGTCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: FLSSTIIFGAPLLNR*WDLAPDTCRKSWSE Trigger: TTCAGACCAACTCTTCCTACATGTGTCAGGTGCTAGATCCCACCATCTATTTAATAAGGGAGCCCCAAATATAATTGTGCTAGAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGTCAGAGTGGTACACGCCTAGGATCCAGCACTTGGGACGAACAGGCAGGCCCACCCACAGAATGTaGGCGGGTGTAGGTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TQSEWYTPRIQHLGRTGRPTHRM*AGVGPK Trigger: CTTGGGACCTACACCCGCTCACATTCTGTGGGTGGG...CCTGCCTGTTCGTCCCAAGTGCTGGATCCTAGGCGTGTACCACTCTGACTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCAGCACTTGGGACGAACAGGCAGGAAGATCACAAGTTCAAGGGCATCCTCACACGAGGGGAGCCATaGGCTGTGATGGAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: DPALGTNRQEDHKFKGILTRGEP*AVMEPG Trigger: ACCAGGCTCCATCACAGCCCATGGCTCCCCTCGTGT...GAGGATGCCCTTGAACTTGTGATCTTCCTGCCTGTTCGTCCCAAGTGCTGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR CAA 90 bp | TGTATGTGGAGGTCTGTGCCAGCCAGGGCCACATTAAATGCTGTCTaGAAAATCCAACACCACCCCACCTTCTGCCACCACAGCCACACA | + |
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Preference number: 2 (lower is better) Translates to: CMWRSVPARATLNAV*KIQHHPTFCHHSHT Trigger: TGTGTGGCTGTGGTGGCAGAAGGTGGGGTGGTGTTGGATTTTCAAGACAGCATTTAATGTGGCCCTGGCTGGCACAGACCTCCACATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGCACTTGGGACGAACAGGCAGGAAGATCACAAGTTCAAGGGCATCCTCACCTGTGCAGGAAACTaGCTTAGGTTGGCTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: DPALGTNRQEDHKFKGILTCAGN*LRLALD Trigger: GTCCAGAGCCAACCTAAGTCAGTTTCCTGCACAGGT...GAGGATGCCCTTGAACTTGTGATCTTCCTGCCTGTTCGTCCCAAGTGCTGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR-3UTR CCA 90 bp | CACATTAAATGCTGTCTTGAAAATCCAACACCACCCCACCTTCTGCCACCACAGGGCTGTGATGGAGCCTaGTGCTCGCCCCACATTCAG | + |
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Preference number: 2 (lower is better) Translates to: HIKCCLENPTPPHLLPPQGCDGA*CSPHIQ Trigger: CTGAATGTGGGGCGAGCACCAGGCTCCATCACAGCC...CTGTGGTGGCAGAAGGTGGGGTGGTGTTGGATTTTCAAGACAGCATTTAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGGGTACTGTTCTGGGATaGAAGGCTGGGGATGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CLISALVHQNGVDADGEGGTVLG*KAGDGE Trigger: TTCTCCATCCCCAGCCTTTCATCCCAGAACAGTACC...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGATGGACAGTGGTCTACCACTTGCTGCTTTTGAATCACAGAACAGTTCATGTATGCACGTGAACTaGGACGAAGAAACCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TGMDSGLPLAAFESQNSSCMHVN*DEETQG Trigger: ACCCTGGGTTTCTTCGTCTCAGTTCACGTGCATACA...TGAACTGTTCTGTGATTCAAAAGCAGCAAGTGGTAGACCACTGTCCATCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTTGGTGACACCGGATCCCAAGATCCCTaGATCTTTCTAGGCATCACT | + |
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Preference number: 2 (lower is better) Translates to: VLGDVSGSTRFRRSFGDTGSQDP*IFLGIT Trigger: AGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCC...GGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR GCA 90 bp | GATCCAGCACTTGGGACGAACAGGCAGGAAGATCACAAGTTCAAGGGCATCCTCCAGGGCCACATTAAATaGTGTCTTGAAAATCCAACA | + |
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Preference number: 2 (lower is better) Translates to: DPALGTNRQEDHKFKGILQGHIK*CLENPT Trigger: TGTTGGATTTTCAAGACAGCATTTAATGTGGCCCTG...GAGGATGCCCTTGAACTTGTGATCTTCCTGCCTGTTCGTCCCAAGTGCTGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTTTCACCAAAATGGGGTaGATGCAGATGGTGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSFTKMG*MQMVRG Trigger: CCCCCTCACCATCTGCATCCACCCCATTTTGGTGAA...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR GCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGTGGCATTTACTATTATaGTGTGCCTTGTTTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: DETSSPRDAYTDTQAVTWWHLLL*CALFVY Trigger: GTAAACAAACAAGGCACAGCATAATAGTAAATGCCA...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTATTCATAACTGTAGATaGGACCAGCAGCCCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSIHNCR*DQQPQR Trigger: TCTCTGGGGCTGCTGGTCTCATCTACAGTTATGAAT...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTAGTCACTCAATACAATaGGTAGAGCCTCATTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSSHSIQ*VEPHWA Trigger: GGCCCAATGAGGCTCTACTCATTGTATTGAGTGACT...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR TCA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAACTGGCCACTCTCCAATaGGATCCAGGCCAGGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: TPSTKRIYFMISHHVGVKLATLQ*DPGQVN Trigger: GTTCACCTGGCCTGGATCTCATTGGAGAGTGGCCAG...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR CCA 90 bp | TACCTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCAACATGTAGGAAGAGTTaGTCTGAAATGAAAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: YLPLLAQVLPPPDTHTNSTCRKS*SEMKEN Trigger: GTTCTCTTTCATTTCAGACCAACTCTTCCTACATGT...TGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTCTGCTGTGTAGTAAAATGAATAAAATGAACCAGAAGGAAGAGCCTAACGTGGAGAGCCGGGCATaGTGGTGCACACCTTTAACC | + |
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Preference number: 2 (lower is better) Translates to: KALLCSKMNKMNQKEEPNVESRA*WCTPLT Trigger: GGTTAAAGGTGTGCACCACCATGCCCGGCTCTCCAC...GTTAGGCTCTTCCTTCTGGTTCATTTTATTCATTTTACTACACAGCAGAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACAATTCATAACTGTAGATaGGACCAGCAGCCCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QDPCIFLGITEYISKGQTIHNCR*DQQPQR Trigger: TCTCTGGGGCTGCTGGTCTCATCTACAGTTATGAAT...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR CCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACACATGTAGGAAGAGTTaGTCTGAAATGAAAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHTCRKS*SEMKEN Trigger: GTTCTCTTTCATTTCAGACCAACTCTTCCTACATGT...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTAGTAAAATGAATAAAATGAACCAGAAGGAAGAGCCTAACATGCTAAGAGAGAGCCGGGCATGGTaGTGCACACCTTTAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LCSKMNKMNQKEEPNMLRESRAW*CTPLTR Trigger: TCTGGTTAAAGGTGTGCACCACCATGCCCGGCTCTC...TCTTAGCATGTTAGGCTCTTCCTTCTGGTTCATTTTATTCATTTTACTACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
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| 3UTR CAA 90 bp | GAGTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTaGGTGACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: EFWEMSVVAQGFVEV*VTPSTKRIYFMISH Trigger: ATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR GCA 90 bp | ATAACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCATGGCATTTACTATTATaGTGTGCCTTGTTTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: ITVDETSSPRDAYTDTQAWHLLL*CALFVY Trigger: GTAAACAAACAAGGCACAGCATAATAGTAAATGCCA...TGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTAGCTTTACAAGTCAATaGCCAGGAAAAACTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSSFTSQ*PGKTQL Trigger: AAGCTGAGTTTTTCCTGGCCATTGACTTGTAAAGCT...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCTGTGTAGTAAAATGAATAAAATGAACCAGAAGGAAGAGCCTAACATGAATAAAAATTCTCTGTaGAGAGCCGGGCATGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ALLCSKMNKMNQKEEPNMNKNSL*RAGHGG Trigger: ACCACCATGCCCGGCTCTCCACAGAGAATTTTTATT...CATGTTAGGCTCTTCCTTCTGGTTCATTTTATTCATTTTACTACACAGCAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACAACATGTAGGAAGAGTTaGTCTGAAATGAAAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QDPCIFLGITEYISKGQTTCRKS*SEMKEN Trigger: GTTCTCTTTCATTTCAGACCAACTCTTCCTACATGT...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR TCA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAATTATGCTTCAAGCTCTaGTTAGGAGTAAAGACCACA | + |
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Preference number: 2 (lower is better) Translates to: TPSTKRIYFMISHHVGVKLCFKL*LGVKTT Trigger: TGTGGTCTTTACTCCTAATCAGAGCTTGAAGCATAA...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR-3UTR GCA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAATGGCATTTACTATTATaGTGTGCCTTGTTTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: TPSTKRIYFMISHHVGVKWHLLL*CALFVY Trigger: GTAAACAAACAAGGCACAGCATAATAGTAAATGCCA...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR CCA 72 bp | GGGAACACGAGGGGAGCCATGGGCTGTGATGGAGCCTaGTGCTCGCCCCACATTCAGGAAACGCCAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GNTRGAMGCDGA*CSPHIQETPAA Trigger: TGCAGCTGGCGTTTCCTGAATGTGGGGCGAGCACCAGGCTCCATCACAGCCCATGGCTCCCCTCGTGTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR CCA 72 bp | GGTGCTGGAGAAACGATGGGAACACGAGGGGAGCCATaGGCTGTGATGGAGCCTGGTGCTCGCCCCACATTC | + |
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Preference number: 3 (lower is better) Translates to: GAGETMGTRGEP*AVMEPGARPTF Trigger: GAATGTGGGGCGAGCACCAGGCTCCATCACAGCCCATGGCTCCCCTCGTGTTCCCATCGTTTCTCCAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR GCA 72 bp | AACACGAGGGGAGCCATGGGCTGTGATGGAGCCTGGTaGTCGCCCCACATTCAGGAAACGCCAGCTGCAATC | + |
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Preference number: 3 (lower is better) Translates to: NTRGAMGCDGAW*SPHIQETPAAI Trigger: GATTGCAGCTGGCGTTTCCTGAATGTGGGGCGAGCACCAGGCTCCATCACAGCCCATGGCTCCCCTCGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR CCA 72 bp | CCCAGTCAGAGTGGTACACGCCTAGGATCCAGCACTTaGGACGAACAGGCAGGAAGATCACAAGTTCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: PSQSGTRLGSST*DEQAGRSQVQG Trigger: CCCTTGAACTTGTGATCTTCCTGCCTGTTCGTCCCAAGTGCTGGATCCTAGGCGTGTACCACTCTGACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR CCA 72 bp | GCTGGGCAGGGCTCAAGGGCAGGTAGGGTACTGTTCTaGGATGAAAGGCTGGGGATGGAGAAACTAACATTT | + |
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Preference number: 3 (lower is better) Translates to: AGQGSRAGRVLF*DERLGMEKLTF Trigger: AAATGTTAGTTTCTCCATCCCCAGCCTTTCATCCCAGAACAGTACCCTACCTGCCCTTGAGCCCTGCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR CCA 72 bp | TTGAAGTCAAGACCTGTGCAGGAAACTGACTTAGGTTaGCTCTGGACGGGGTCCCACCCACAGAATGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: LKSRPVQETDLG*LWTGSHPQNVS Trigger: GCTCACATTCTGTGGGTGGGACCCCGTCCAGAGCCAACCTAAGTCAGTTTCCTGCACAGGTCTTGACTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR CCA 72 bp | ATGATGAAGCCTAGGCTGAGGCAGACTTCTCAGTCTTaGAAGCCCCTACACACCACTTCTGATGGGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: MMKPRLRQTSQS*KPLHTTSDGSI Trigger: GATGGACCCATCAGAAGTGGTGTGTAGGGGCTTCCAAGACTGAGAAGTCTGCCTCAGCCTAGGCTTCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| 3UTR TCA 72 bp | CTCCAAGTAAATGAGAGCAAACTGGCCACTCTCCAATaGGATCCAGGCCAGGTGAACTGCCTTACGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQVNESKLATLQ*DPGQVNCLTKG Trigger: CCCTTTCGTAAGGCAGTTCACCTGGCCTGGATCTCATTGGAGAGTGGCCAGTTTGCTCTCATTTACTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR GCA 72 bp | TATGTGGAGGTCTGTGCCAGCCAGGGCCACATTAAATaGTGTCTTGAAAATCCAACACCACCCCACCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YVEVCASQGHIK*CLENPTPPHLL Trigger: CAGAAGGTGGGGTGGTGTTGGATTTTCAAGACAGCATTTAATGTGGCCCTGGCTGGCACAGACCTCCACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| 3UTR CCA 72 bp | TGCTGTCACTCTGGATTTGTGGGTGCTACACAGGGATaGACAGTGGTCTACCACTTGCTGCTTTTGAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: CCHSGFVGATQG*TVVYHLLLLNH Trigger: GTGATTCAAAAGCAGCAAGTGGTAGACCACTGTCCATCCCTGTGTAGCACCCACAAATCCAGAGTGACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCCAGCACTTGGGACGAACAGGCAGGAAGATCACAAGTTCAAGGGCATCCTCACATTAAATGCTGTCTaGAAAATCCAACACCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: DPALGTNRQEDHKFKGILTLNAV*KIQHHP Trigger: GGGGTGGTGTTGGATTTTCAAGACAGCATTTAATGT...GAGGATGCCCTTGAACTTGTGATCTTCCTGCCTGTTCGTCCCAAGTGCTGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| 3UTR TCA 72 bp | CTTCATTTCTCAGCTGGAAGTCAGCCTCCAAGTAAATaGGAGCAAACTGGCCACTCTCCAATGAGATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LHFSAGSQPPSK*EQTGHSPMRSR Trigger: CCTGGATCTCATTGGAGAGTGGCCAGTTTGCTCTCATTTACTTGGAGGCTGACTTCCAGCTGAGAAATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR TCA 72 bp | ACTGAGTATATCTCAAAGGGTCAAACACTTTTGGCCTaGGGATTCAGGACATCACCCACCCCAGTCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TEYISKGQTLLA*GFRTSPTPVCK Trigger: TTTGCAGACTGGGGTGGGTGATGTCCTGAATCCTCAGGCCAAAAGTGTTTGACCCTTTGAGATATACTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTTCTCTTGGTTTCGTAGAAGTTTaGGTGACACCCTCAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CFVGKSFWPWSRPHHSSLGFVEV*VTPSTK Trigger: TTTGGTTGAGGGTGTCACCAAAACTTCTACGAAACC...AAGAGAACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR TCA 72 bp | CCCAGTCTGCAAAACCTAAATATTCATAACTGTAGATaGGACCAGCAGCCCCAGAGATGCCTACACAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLQNLNIHNCR*DQQPQRCLHRY Trigger: GTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTATGAATATTTAGGTTTTGCAGACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR TCA 72 bp | AGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTaGGTATATCTCAAAGGGTCAAACACTTTTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RIPRSLHLSRHH*VYLKGSNTFGL Trigger: CAGGCCAAAAGTGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR GCA 72 bp | ACACACACAAACTCACCTCCCCTAAACAAACCCCTCTaGATAGAGCTCACCATGGCATTTACTATTATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: THTNSPPLNKPL*IELTMAFTIML Trigger: CAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| 3UTR TCA 72 bp | TTCAGAAAGGTAAATCTGGTTTGTATGCACGTGAACTaGGACGAAGAAACCCAGGGTGAGTCCCTTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FRKVNLVCMHVN*DEETQGESLEV Trigger: AACTTCAAGGGACTCACCCTGGGTTTCTTCGTCTCAGTTCACGTGCATACAAACCAGATTTACCTTTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| 3UTR CCA 72 bp | CACTGGCAGGCATGCACAGTCAGCTTTACAAGTCAATaGCCAGGAAAAACTCAGCTTTTCTTCAACATCATA | + |
|
Preference number: 3 (lower is better) Translates to: HWQACTVSFTSQ*PGKTQLFFNII Trigger: TATGATGTTGAAGAAAAGCTGAGTTTTTCCTGGCCATTGACTTGTAAAGCTGACTGTGCATGCCTGCCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR CCA 72 bp | CAAATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATaGTCAAGGCCTCACCATAGTTCTCTTCCTCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: QIKCFVGKSFWP*SRPHHSSLPQI Trigger: GATCTGAGGAAGAGAACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR CCA 72 bp | ACTCTGCAAATAAAGTGCTTTGTAGGAAAATCCTTCTaGCCATGGTCAAGGCCTCACCATAGTTCTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLQIKCFVGKSF*PWSRPHHSSLP Trigger: AGGAAGAGAACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTATTTGCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR TCA 72 bp | AGCATCCAAGGGAATTTATTTTGCAAGCAGGTAAAGTaGAAATGGGCATACACGAGAGGACACAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SIQGNLFCKQVK*KWAYTRGHRER Trigger: TCTCTCTCTGTGTCCTCTCGTGTATGCCCATTTTCACTTTACCTGCTTGCAAAATAAATTCCCTTGGATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAATCTGTAAAACTTAAAGATGTTGCTGTCACTCTGGATTTGTGGGTGCTAACAGTGGTCTACCACTaGCTGCTTTTGAATCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKSVKLKDVAVTLDLWVLTVVYH*LLLNHR Trigger: TCTGTGATTCAAAAGCAGCAAGTGGTAGACCACTGT...TAGCACCCACAAATCCAGAGTGACAGCAACATCTTTAAGTTTTACAGATTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| 3UTR TCA 72 bp | CACAGGGATGGACAGTGGTCTACCACTTGCTGCTTTTaGATCACAGAACAGTTCAGAATTAAATACTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: HRDGQWSTTCCF*ITEQFRIKYYL Trigger: TAAGTAGTATTTAATTCTGAACTGTTCTGTGATTCAAAAGCAGCAAGTGGTAGACCACTGTCCATCCCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAAACTAAAAGACACTTCTaGGGCCTTCATTTCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TPSTKRIYFMISHHVGVKTKRHF*GLHFSA Trigger: AGCTGAGAAATGAAGGCCCAAGAAGTGTCTTTTAGT...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | CCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCCCCAGCTCCTCGCCTTCTaGGATCTTGCCCAGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLLAQVLPPPDTHTNSPPQLLAF*DLAQGP Trigger: CGGGCCCTGGGCAAGATCTCAGAAGGCGAGGAGCTG...GGGAGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGCAGCTCCTCGCCTTCTaGGATCTTGCCCAGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLISALVHQNGVDADGEGQLLAF*DLAQGP Trigger: CGGGCCCTGGGCAAGATCTCAGAAGGCGAGGAGCTG...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCGTAGGAGAGGACCTCTaGTGCAATGCTGAGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPVGEDL*CNAEQP Trigger: CGGCTGCTCAGCATTGCATCAGAGGTCCTCTCCTAC...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGCTTCCTGGGAGGGCTTaGGGTCTTCCTTCGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWLPGRA*GLPSLP Trigger: TGGCAGCGAAGGAAGACCCCAAGCCCTCCCAGGAAG...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGGTGTCGGCGAACACTaGCTCCTGCTTCTCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWGVGEH*LLLLQA Trigger: TGCCTGGAGAAGCAGGAGCCAGTGTTCGCCGACACC...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCCCGGTGTCGGCGAACACTaGCTCCTGCTTCTCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLAQVLPPPDTHTNSPPGVGEH*LLLLQA Trigger: TGCCTGGAGAAGCAGGAGCCAGTGTTCGCCGACACC...GGGAGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCTGCCCCACTTCGATGTaGCCAGCATGCCAGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPCPTSM*PACQLV Trigger: TACCAACTGGCATGCTGGTCACATCGAAGTGGGGCA...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCTACTGCATGCTGAACTaGTGGCTCTGTGGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPYCMLN*WLCGGQ Trigger: CTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTA...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCCCCCAGTTGGTAAGCCCTaGCCTCATCACAGCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLAQVLPPPDTHTNSPPPVGKP*PHHSHA Trigger: GGCATGGCTGTGATGAGGGCAGGGCTTACCAACTGG...GGGAGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCAAGTTAATGAGGCTCTaGCAGCCTCCACAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPKLMRL*QPPQAS Trigger: GGAGGCCTGTGGAGGCTGGCAGAGCCTCATTAACTT...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCATGACCTGCATGGGCTaGTTGTTCAGGGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPMTCMG*LFRAAS Trigger: AGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCAT...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGGCCTGCGCTCCTCACTaGGGTGCAGGAAGTCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRACAPH*GAGSLC Trigger: ACATAGACTTCCTGCACCTCAGTGAGGAGCGCAGGC...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCATCCTTCTGGCACGTaGGGTCGCAGTAATGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPHPSGT*GRSNGR Trigger: TCGCCCATTACTGCGACCGCACGTGCCAGAAGGATG...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGCCAGGTTGGGGAAGATaGCCACACCTACTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWPGWGR*PHLLPV Trigger: TACAGGCAGTAGGTGTGGGCATCTTCCCCAACCTGG...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCGCGAACACTGGCTCCTaGTTCTCCAGGCACTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PDTHTNSPPLNKPLCIELANTGS*FSRHSR Trigger: TCGGGAGTGCCTGGAGAAGCAGGAGCCAGTGTTCGC...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCCAGTTGGTAAGCCCTaGCCTCATCACAGCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPPVGKP*PHHSHA Trigger: GGCATGGCTGTGATGAGGGCAGGGCTTACCAACTGG...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCGCCTGCGCTCCTCACTaGGGTGCAGGAAGTCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: TVDETSSPRDAYTDTQAVACAPH*GAGSLC Trigger: ACATAGACTTCCTGCACCTCAGTGAGGAGCGCAGGC...GACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGGCCTGCGCTCCTCACTaGGGTGCAGGAAGTCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: CLISALVHQNGVDADGEGACAPH*GAGSLC Trigger: ACATAGACTTCCTGCACCTCAGTGAGGAGCGCAGGC...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPRWSFS*LLKQVW Trigger: CCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCG...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | TACCTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACATCCTTCTGGCACGTaGGGTCGCAGTAATGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YLPLLAQVLPPPDTHTNSHPSGT*GRSNGR Trigger: TCGCCCATTACTGCGACCGCACGTGCCAGAAGGATG...TGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTACTCGGAGTTCCTTCTaGTCCTCCTCCCCAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPTRSSF*SSSPKC Trigger: GCACTTTGGGGAGGAGGAGCAGAAGGAACTCCGAGT...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGTGTGGTGGCCAGTACTaGAAGAACGTGTCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWCGGQY*KNVSTS Trigger: AGACGTGGACACGTTCTTGCAGTACTGGCCACCACA...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGTACTGCATGCTGAACTaGTGGCTCTGTGGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRYCMLN*WLCGGQ Trigger: CTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTA...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | ACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACCATGGCGGGGTCTTCCTTCGCTaGCAGGAAGAGGTCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: THKLTSPKQTPLHRAHHGGVFLR*QEEVVL Trigger: AAGGACGACCTCTTCCTGGCAGCGAAGGAAGACCCC...GCCATGGTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACCACTGCCCGCAGCGATaGAGCTTCTCCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHHCPQR*SFSCLL Trigger: CAAGAGGCAGGAGAAGCTCCATCGCTGCGGGCAGTG...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGTGCATGCTGAACTGCTaGCTCTGTGGTGGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRCMLNC*LCGGQY Trigger: GTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCA...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGGCCTGTAGCCCTCTCTaGTCACTGAGAGTGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRACSPL*SLRVKP Trigger: CGGTTTCACTCTCAGTGACCAGAGAGGGCTACAGGC...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCCCTTTGGCCAGCAATCATaGTTCACCAGGCCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLAQVLPPPDTHTNSPPFGQQS*FTRPRL Trigger: CAACCTGGGCCTGGTGAACCATGATTGCTGGCCAAA...GGGAGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCTCCTTCAGCCCCTTCTaGCAGTGCTCACAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVDETSSPRDAYTDTQAVSFSPF*QCSQEQ Trigger: CTGCTCCTGTGAGCACTGCCAGAAGGGGCTGAAGGA...GACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR CCA 90 bp | ACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACCATGGCTCCTTCAGCCCCTTCTaGCAGTGCTCACAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THKLTSPKQTPLHRAHHGSFSPF*QCSQEQ Trigger: CTGCTCCTGTGAGCACTGCCAGAAGGGGCTGAAGGA...GCCATGGTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| 3UTR CAA 72 bp | AGGTCTGTGCCAGCCAGGGCCACATTAAATGCTGTCTaGAAAATCCAACACCACCCCACCTTCTGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSVPARATLNAV*KIQHHPTFCHH Trigger: GTGGTGGCAGAAGGTGGGGTGGTGTTGGATTTTCAAGACAGCATTTAATGTGGCCCTGGCTGGCACAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
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| 3UTR CAA 72 bp | ACCCAGTCAGAGTGGTACACGCCTAGGATCCAGCACTaGGGACGAACAGGCAGGAAGATCACAAGTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQSEWYTPRIQH*GRTGRKITSSR Trigger: CCTTGAACTTGTGATCTTCCTGCCTGTTCGTCCCAAGTGCTGGATCCTAGGCGTGTACCACTCTGACTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| CDS-3UTR TCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACCCCTCTCCGCAAAGATaGCATCCGCAGCCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHPSPQR*HPQPRT Trigger: AGTTCTGGGCTGCGGATGTCATCTTTGCGGAGAGGG...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGGCGCACTCGTTCTTGTaGTTCAGCCAAGCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRAHSFL*FSQASF Trigger: GAAGGATGCTTGGCTGAATCACAAGAACGAGTGCGC...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR TCA 90 bp | AACATGCTAAGAATAAAAATTCTCTGTGGAGAGCCGGGCATGGTGGTGCACACCGTTGGCGGATCTCTGTaGGCTCCAAGACAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NMLRIKILCGEPGMVVHTVGGSL*APRQPG Trigger: CCCTGGCTGTCTTGGAGCTCACAGAGATCCGCCAAC...GGTGTGCACCACCATGCCCGGCTCTCCACAGAGAATTTTTATTCTTAGCATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS-3UTR GCA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCCGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDTHTNSPPLNKPLCIELRWSFS*LLKQVW Trigger: CCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCG...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCCGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVDETSSPRDAYTDTQAVRWSFS*LLKQVW Trigger: CCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCG...GACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTTGTGGTGGCCAGTACTaGAAGAACGTGTCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPCGGQY*KNVSTS Trigger: AGACGTGGACACGTTCTTGCAGTACTGGCCACCACA...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCCCAGGTTGGGGAAGATaGCCACACCTACTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDTHTNSPPLNKPLCIELPGWGR*PHLLPV Trigger: TACAGGCAGTAGGTGTGGGCATCTTCCCCAACCTGG...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCAGCCCCTTCTGGCAGTaGTCACAGGAGCAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDTHTNSPPLNKPLCIELSPFWQ*SQEQSK Trigger: CTTTGACTGCTCCTGTGAGCACTGCCAGAAGGGGCT...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR CCA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGCTGCTGGCTCTGTGGTaGCCAGTACTGCAAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: CLISALVHQNGVDADGEGLLALW*PVLQER Trigger: ACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAG...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| CDS-3UTR CCA 90 bp | ACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCTGCATGCTGAACTGCTaGCTCTGTGGTGGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVDETSSPRDAYTDTQAVCMLNC*LCGGQY Trigger: GTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCA...GACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTTTTGGCCAGCAATCATaGTTCACCAGGCCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPFGQQS*FTRPRL Trigger: CAACCTGGGCCTGGTGAACCATGATTGCTGGCCAAA...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACTCCTTCAGCCCCTTCTaGCAGTGCTCACAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHSFSPF*QCSQEQ Trigger: CTGCTCCTGTGAGCACTGCCAGAAGGGGCTGAAGGA...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR CCA 90 bp | GTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTTGGTGACACCCTTCCTGGGAGGGCTTaGGGTCTTCCTTCGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGDVSGSTRFRRSFGDTLPGRA*GLPSLP Trigger: TGGCAGCGAAGGAAGACCCCAAGCCCTCCCAGGAAG...GGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| CDS-3UTR TCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGAGATATACTGCATGCTaGACTGCTGGCTCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRRYTAC*TAGSVV Trigger: CACCACAGAGCCAGCAGTTCAGCATGCAGTATATCT...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTCAGCTCCTCGCCTTCTaGGATCTTGCCCAGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFQLLAF*DLAQGP Trigger: CGGGCCCTGGGCAAGATCTCAGAAGGCGAGGAGCTG...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR TCA 90 bp | ATAACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTAGGAGAGGACCTCTaGTGCAATGCTGAGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ITVDETSSPRDAYTDTQAVGEDL*CNAEQP Trigger: CGGCTGCTCAGCATTGCATCAGAGGTCCTCTCCTAC...TGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR TCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCGCCTCTCGCATCTTGTaGTACATGAATTCGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPASRIL*YMNSFW Trigger: CCAAAACGAATTCATGTATCACAAGATGCGAGAGGC...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS-3UTR GCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTGCTGTCAAAAACCACTaGAGAATAAGCCCTCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPAVKNH*RISPLR Trigger: GCGGAGAGGGCTTATTCTGCAGTGGTTTTTGACAGC...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| CDS-3UTR GCA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTGGGCGAACTTGCACTaGCCGCAGCGATGGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTTGSQDPCIFLGITEYIWANLH*PQRWSF Trigger: GAAGCTCCATCGCTGCGGGCAGTGCAAGTTCGCCCA...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| CDS-3UTR GCA 90 bp | ACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACCATGGCTCCTCCTCCCCAAAGTaGTCCACGTGGTTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: THKLTSPKQTPLHRAHHGSSSPK*STWFCK Trigger: CTTACAGAACCACGTGGAGCACTTTGGGGAGGAGGA...GCCATGGTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR GCA 90 bp | ATAACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGGGGTCTTCCTTCGCTaGCAGGAAGAGGTCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITVDETSSPRDAYTDTQAGVFLR*QEEVVL Trigger: AAGGACGACCTCTTCCTGGCAGCGAAGGAAGACCCC...TGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR GCA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCGCGAACACTGGCTCCTaGTTCTCCAGGCACTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KTTGSQDPCIFLGITEYIANTGS*FSRHSR Trigger: TCGGGAGTGCCTGGAGAAGCAGGAGCCAGTGTTCGC...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| CDS-3UTR GCA 90 bp | GTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTTGGTGACACCCCAGTTGGTAAGCCCTaGCCTCATCACAGCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGDVSGSTRFRRSFGDTPVGKP*PHHSHA Trigger: GGCATGGCTGTGATGAGGGCAGGGCTTACCAACTGG...GGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| CDS-3UTR GCA 90 bp | ACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCAGCTCCATCTCTGTCTaGATCCGCATGGCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVDETSSPRDAYTDTQAVSSISV*IRMASK Trigger: CTTAGAGGCCATGCGGATGCAGACAGAGATGGAGCT...GACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR CCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACGCCTGTAGCCCTCTCTaGTCACTGAGAGTGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHACSPL*SLRVKP Trigger: CGGTTTCACTCTCAGTGACCAGAGAGGGCTACAGGC...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR CCA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCTTTGGCCAGCAATCATaGTTCACCAGGCCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PDTHTNSPPLNKPLCIELFGQQS*FTRPRL Trigger: CAACCTGGGCCTGGTGAACCATGATTGCTGGCCAAA...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR CCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCTACATGAATTCGTTTTaGCGGAACATACGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPYMNSF*RNIRSS Trigger: GGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTA...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS-3UTR TCA 90 bp | GTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTTGGTGACACCCTTTGCCCTCGGAAGTaGAGACCTCCACGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGDVSGSTRFRRSFGDTLCPRK*RPPRSP Trigger: TGGAGAACGTGGAGGTCTTCACTTCCGAGGGCAAAG...GGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTTGGTGACACCTGCCCCACTTCGATGTaGCCAGCATGCCAGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGDVSGSTRFRRSFGDTCPTSM*PACQLV Trigger: TACCAACTGGCATGCTGGTCACATCGAAGTGGGGCA...GGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCGCATCTTGTGATACATaGATTCGTTTTGGCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NDSGGHRVVISSAPQPQPASCDT*IRFGGT Trigger: TGTTCCGCCAAAACGAATTCATGTATCACAAGATGC...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS-3UTR TCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGCCTCTCGCATCTTGTaGTACATGAATTCGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWASRIL*YMNSFW Trigger: CCAAAACGAATTCATGTATCACAAGATGCGAGAGGC...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | TACCTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCCTCATCACAGCCATaGCCAGTTGGGCATTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLPLLAQVLPPPDTHTNSPSSQP*PVGHCY Trigger: ATAACAATGCCCAACTGGGCATGGCTGTGATGAGGG...TGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACAGCTCCATCTCTGTCTaGATCCGCATGGCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHSSISV*IRMASK Trigger: CTTAGAGGCCATGCGGATGCAGACAGAGATGGAGCT...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCTCTTGAAGCAGGTGTaGCACACGAAGTTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPLLKQV*HTKLMR Trigger: CCTCATTAACTTCGTGTGCCACACCTGCTTCAAGAG...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGCTCTTGAAGCAGGTGTaGCACACGAAGTTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRLLKQV*HTKLMR Trigger: CCTCATTAACTTCGTGTGCCACACCTGCTTCAAGAG...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGTATGACAGTGCAGTTTaGCCAGCAATCATGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWYDSAV*PAIMVH Trigger: GTGAACCATGATTGCTGGCCAAACTGCACTGTCATA...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCCTTTCCCATATTTCTTaGTGGCAGCGCACTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDTHTNSPPLNKPLCIELLSHIS*WQRTRS Trigger: AGAACGAGTGCGCTGCCATCAAGAAATATGGGAAAG...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCATCCTCATCTGCGTGTaGAACATGGATTTCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PDTHTNSPPLNKPLCIELILICV*NMDFTA Trigger: GGCAGTGAAATCCATGTTTCACACGCAGATGAGGAT...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTGTAGGAGAGGACCTCTaGTGCAATGCTGAGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSVGEDL*CNAEQP Trigger: CGGCTGCTCAGCATTGCATCAGAGGTCCTCTCCTAC...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTGCCTCTCGCATCTTGTaGTACATGAATTCGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPASRIL*YMNSFW Trigger: CCAAAACGAATTCATGTATCACAAGATGCGAGAGGC...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | TGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTTCTCTTCCAGGTTGGGGAAGATaGCCACACCTACTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CFVGKSFWPWSRPHHSSLPGWGR*PHLLPV Trigger: TACAGGCAGTAGGTGTGGGCATCTTCCCCAACCTGG...AAGAGAACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACCCCTCATCACAGCCATaGCCAGTTGGGCATTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHPSSQP*PVGHCY Trigger: ATAACAATGCCCAACTGGGCATGGCTGTGATGAGGG...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTTGGTGACACCAGCTCCATCTCTGTCTaGATCCGCATGGCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGDVSGSTRFRRSFGDTSSISV*IRMASK Trigger: CTTAGAGGCCATGCGGATGCAGACAGAGATGGAGCT...GGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTGCATGCTGAACTGCTaGCTCTGTGGTGGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KTTGSQDPCIFLGITEYICMLNC*LCGGQY Trigger: GTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCA...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCGCCTGTAGCCCTCTCTaGTCACTGAGAGTGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: KTTGSQDPCIFLGITEYIACSPL*SLRVKP Trigger: CGGTTTCACTCTCAGTGACCAGAGAGGGCTACAGGC...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTTCTCTTATGACCTGCATGGGCTaGTTGTTCAGGGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFVGKSFWPWSRPHHSSLMTCMG*LFRAAS Trigger: AGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCAT...AAGAGAACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTCCCTCTCCGCAAAGATaGCATCCGCAGCCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFPSPQR*HPQPRT Trigger: AGTTCTGGGCTGCGGATGTCATCTTTGCGGAGAGGG...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | ATAACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAAGATATACTGCATGCTaGACTGCTGGCTCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITVDETSSPRDAYTDTQARYTAC*TAGSVV Trigger: CACCACAGAGCCAGCAGTTCAGCATGCAGTATATCT...TGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTGCATCTTGTGATACATaGATTCGTTTTGGCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPASCDT*IRFGGT Trigger: TGTTCCGCCAAAACGAATTCATGTATCACAAGATGC...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTAGCCCCTTCTGGCAGTaGTCACAGGAGCAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSSPFWQ*SQEQSK Trigger: CTTTGACTGCTCCTGTGAGCACTGCCAGAAGGGGCT...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTGGCTCAGCCATGACCTaGATGGGCTGGTTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFGSAMT*MGWLFR Trigger: CCTGAACAACCAGCCCATGCAGGTCATGGCTGAGCC...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTCTGCTGGCTCTGTGGTaGCCAGTACTGCAAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSLLALW*PVLQER Trigger: ACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAG...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCGAACTGCTGGCTCTGTaGTGGCCAGTACTGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTTGSQDPCIFLGITEYIELLAL*WPVLQE Trigger: TTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTC...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTTCACCAGGCCCAGGTTaGGGAAGATGCCCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFSPGPG*GRCPHL Trigger: TAGGTGTGGGCATCTTCCCCAACCTGGGCCTGGTGA...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGTATGACAGTGCAGTTTaGCCAGCAATCATGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLISALVHQNGVDADGEGYDSAV*PAIMVH Trigger: GTGAACCATGATTGCTGGCCAAACTGCACTGTCATA...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGTCTGCGTGTGAAACATaGATTTCACTGCCTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRSACET*ISLPHD Trigger: ATCATGAGGCAGTGAAATCCATGTTTCACACGCAGA...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTTCTGCGTGTGAAACATaGATTTCACTGCCTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPSACET*ISLPHD Trigger: ATCATGAGGCAGTGAAATCCATGTTTCACACGCAGA...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | ACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACCATGGCTACATGAATTCGTTTTaGCGGAACATACGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THKLTSPKQTPLHRAHHGYMNSF*RNIRSS Trigger: GGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTA...GCCATGGTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS-3UTR CCA 90 bp | GAAGAGCCTAACATGCTAAGAATAAAAATTCTCTGTGGAGAGCCGGGCATGGTGGCTCCATGGTGTGGCTaGTCTGTCAAAAACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPNMLRIKILCGEPGMVAPWCG*SVKNHC Trigger: GCAGTGGTTTTTGACAGACCAGCCACACCATGGAGC...CACCATGCCCGGCTCTCCACAGAGAATTTTTATTCTTAGCATGTTAGGCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCCACACCAAAGATGTGTaGGATATACTGCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVDETSSPRDAYTDTQAVHTKDV*DILHAE Trigger: TTCAGCATGCAGTATATCTCACACATCTTTGGTGTG...GACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | TACCTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACACACCAAAGATGTGTaGGATATACTGCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLPLLAQVLPPPDTHTNSHTKDV*DILHAE Trigger: TTCAGCATGCAGTATATCTCACACATCTTTGGTGTG...TGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGTTCCAGTGTATCCTTTaGGAATTGTATCATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWFQCIL*ELYHLL Trigger: AAGGAGATGATACAATTCTCAAAGGATACACTGGAA...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGGCATCTTGTGATACATaGATTCGTTTTGGCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLISALVHQNGVDADGEGASCDT*IRFGGT Trigger: TGTTCCGCCAAAACGAATTCATGTATCACAAGATGC...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACATACTGCATGCTGAACTaGTGGCTCTGTGGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDPCIFLGITEYISKGQTYCMLN*WLCGGQ Trigger: CTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTA...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACATGTGTGAGATATACTaGATGCTGAACTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHMCEIY*MLNCWL Trigger: GAGCCAGCAGTTCAGCATGCAGTATATCTCACACAT...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGAAACATGGATTTCACTaGCTCATGATTGCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DETSSPRDAYTDTQAVTWKHGFH*LMIAIV Trigger: AACAATGGCAATCATGAGGCAGTGAAATCCATGTTT...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | GTTCTGGGAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTTGGTGACACCCTCTTGAAGCAGGTGTaGCACACGAAGTTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGDVSGSTRFRRSFGDTLLKQV*HTKLMR Trigger: CCTCATTAACTTCGTGTGCCACACCTGCTTCAAGAG...GGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTCCCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATCACTGCCCGCAGCGATaGAGCTTCTCCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHHCPQR*SFSCLL Trigger: CAAGAGGCAGGAGAAGCTCCATCGCTGCGGGCAGTG...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACTATGACAGTGCAGTTTaGCCAGCAATCATGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHYDSAV*PAIMVH Trigger: GTGAACCATGATTGCTGGCCAAACTGCACTGTCATA...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGTTATGCTTCAAGCTCTGATTAGGAGTAAAGACCACAGGATCCCAAGAGGTGTCGGCGAACACTaGCTCCTGCTTCTCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKVMLQALIRSKDHRIPRGVGEH*LLLLQA Trigger: TGCCTGGAGAAGCAGGAGCCAGTGTTCGCCGACACC...TCTTGGGATCCTGTGGTCTTTACTCCTAATCAGAGCTTGAAGCATAACTTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGAGCCTAACATGCTAAGAATAAAAATTCTCTGTGGAGAGCCGGGCATGCAGGGCTCCATGGTGTaGCTGGTCTGTCAAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KEEPNMLRIKILCGEPGMQGSMV*LVCQKP Trigger: TGGTTTTTGACAGACCAGCCACACCATGGAGCCCTG...CATGCCCGGCTCTCCACAGAGAATTTTTATTCTTAGCATGTTAGGCTCTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTGCGCACTCGTTCTTGTaGTTCAGCCAAGCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFAHSFL*FSQASF Trigger: GAAGGATGCTTGGCTGAATCACAAGAACGAGTGCGC...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTTTCCAGTGTATCCTTTaGGAATTGTATCATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLAQVLPPPDTHTNSPFQCIL*ELYHLL Trigger: AAGGAGATGATACAATTCTCAAAGGATACACTGGAA...AGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACGCATCTTGTGATACATaGATTCGTTTTGGCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHASCDT*IRFGGT Trigger: TGTTCCGCCAAAACGAATTCATGTATCACAAGATGC...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | ATAACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGCCTCTCGCATCTTGTaGTACATGAATTCGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITVDETSSPRDAYTDTQAASRIL*YMNSFW Trigger: CCAAAACGAATTCATGTATCACAAGATGCGAGAGGC...TGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGTTATGCTTCAAGCTCTGATTAGGAGTAAAGACCACAGGATCCCAAGAGGCTCAGCCATGACCTaGATGGGCTGGTTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKVMLQALIRSKDHRIPRGSAMT*MGWLFR Trigger: CCTGAACAACCAGCCCATGCAGGTCATGGCTGAGCC...TCTTGGGATCCTGTGGTCTTTACTCCTAATCAGAGCTTGAAGCATAACTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCCTAACATGCTAAGAATAAAAATTCTCTGTGGAGAGCCGGGCATGGTGTCTGTCAAAAACCACTaGAGAATAAGCCCTCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPNMLRIKILCGEPGMVSVKNH*RISPLR Trigger: GCGGAGAGGGCTTATTCTGCAGTGGTTTTTGACAGA...CACCATGCCCGGCTCTCCACAGAGAATTTTTATTCTTAGCATGTTAGGCTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTGAACTGCTGGCTCTGTaGTGGCCAGTACTGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFELLAL*WPVLQE Trigger: TTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTC...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGTTATGCTTCAAGCTCTGATTAGGAGTAAAGACCACAGGATCCCAAGATCACCAGGCCCAGGTTaGGGAAGATGCCCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: FKVMLQALIRSKDHRIPRSPGPG*GRCPHL Trigger: TAGGTGTGGGCATCTTCCCCAACCTGGGCCTGGTGA...TCTTGGGATCCTGTGGTCTTTACTCCTAATCAGAGCTTGAAGCATAACTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAACTTCCTGGGAGGGCTTaGGGTCTTCCTTCGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSTKRIYFMISHHVGVKLPGRA*GLPSLP Trigger: TGGCAGCGAAGGAAGACCCCAAGCCCTCCCAGGAAG...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTCATCAACCATCCTCCTaGCATAATGTGAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSHQPSS*HNVRPP Trigger: AGGAGGCCTCACATTATGCCAGGAGGATGGTTGATG...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR CAA 72 bp | CCACCACAGCCACACACAAAGCCGGTAAAATTCAACTaGAAGTCAAGACCTGTGCAGGAAACTGACTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQPHTKPVKFN*KSRPVQETDLG Trigger: ACCTAAGTCAGTTTCCTGCACAGGTCTTGACTTCAAGTTGAATTTTACCGGCTTTGTGTGTGGCTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| CDS-3UTR TCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATCTTTGCCCTCGGAAGTaGAGACCTCCACGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHLCPRK*RPPRSP Trigger: TGGAGAACGTGGAGGTCTTCACTTCCGAGGGCAAAG...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCATGTGTGAGATATACTaGATGCTGAACTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTTGSQDPCIFLGITEYIMCEIY*MLNCWL Trigger: GAGCCAGCAGTTCAGCATGCAGTATATCTCACACAT...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCAAACATGGATTTCACTaGCTCATGATTGCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVDETSSPRDAYTDTQAVKHGFH*LMIAIV Trigger: AACAATGGCAATCATGAGGCAGTGAAATCCATGTTT...GACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAAGGGGTCTTCCTTCGCTaGCAGGAAGAGGTCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPSTKRIYFMISHHVGVKGVFLR*QEEVVL Trigger: AAGGACGACCTCTTCCTGGCAGCGAAGGAAGACCCC...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCGCGAACACTGGCTCCTaGTTCTCCAGGCACTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSANTGS*FSRHSR Trigger: TCGGGAGTGCCTGGAGAAGCAGGAGCCAGTGTTCGC...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACACCCTCATCACAGCCATaGCCAGTTGGGCATTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QDPCIFLGITEYISKGQTPSSQP*PVGHCY Trigger: ATAACAATGCCCAACTGGGCATGGCTGTGATGAGGG...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATCTGCTGGCTCTGTGGTaGCCAGTACTGCAAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHLLALW*PVLQER Trigger: ACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAG...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACACATCAACCATCCTCCTaGCATAATGTGAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDPCIFLGITEYISKGQTHQPSS*HNVRPP Trigger: AGGAGGCCTCACATTATGCCAGGAGGATGGTTGATG...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATATGACCTGCATGGGCTaGTTGTTCAGGGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHMTCMG*LFRAAS Trigger: AGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCAT...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCCTGTCTGCATCCGCATaGCAGCCATGCCCAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSLSASA*QPCPVG Trigger: CCCAACTGGGCATGGCTGCCATGCGGATGCAGACAG...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173730.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCTGCTGTGTAGTAAAATGAATAAAATGAACCAGAAGGAAGAGCCTAACCTTTGCCCTCGGAAGTaGAGACCTCCACGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KALLCSKMNKMNQKEEPNLCPRK*RPPRSP Trigger: TGGAGAACGTGGAGGTCTTCACTTCCGAGGGCAAAG...GTTAGGCTCTTCCTTCTGGTTCATTTTATTCATTTTACTACACAGCAGAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTCTTTCCCATATTTCTTaGTGGCAGCGCACTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFLSHIS*WQRTRS Trigger: AGAACGAGTGCGCTGCCATCAAGAAATATGGGAAAG...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTCCTCCTCCCCAAAGTaGTCCACGTGGTTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHSSSPK*STWFCK Trigger: CTTACAGAACCACGTGGAGCACTTTGGGGAGGAGGA...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAAACTCGGAGTTCCTTCTaGTCCTCCTCCCCAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSTKRIYFMISHHVGVKTRSSF*SSSPKC Trigger: GCACTTTGGGGAGGAGGAGCAGAAGGAACTCCGAGT...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR GCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCGGCTCAGCCATGACCTaGATGGGCTGGTTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSGSAMT*MGWLFR Trigger: CCTGAACAACCAGCCCATGCAGGTCATGGCTGAGCC...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
||
| CDS-3UTR CCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCTCACCAGGCCCAGGTTaGGGAAGATGCCCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSSPGPG*GRCPHL Trigger: TAGGTGTGGGCATCTTCCCCAACCTGGGCCTGGTGA...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTTACATGAATTCGTTTTaGCGGAACATACGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSYMNSF*RNIRSS Trigger: GGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTA...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCAACCAAAAGAATTTACTTCATGATTTCCCATCATGTTGGTGTGAAAATGACCTGCATGGGCTaGTTGTTCAGGGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSTKRIYFMISHHVGVKMTCMG*LFRAAS Trigger: AGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCAT...TTTCACACCAACATGATGGGAAATCATGAAGTAAATTCTTTTGGTTGAGGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATAGATATACTGCATGCTaGACTGCTGGCTCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHRYTAC*TAGSVV Trigger: CACCACAGAGCCAGCAGTTCAGCATGCAGTATATCT...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | ATAAAGTGCTTTGTAGGAAAATCCTTCTGGCCATGGTCAAGGCCTCACCATAGTCACACCAAAGATGTGTaGGATATACTGCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKCFVGKSFWPWSRPHHSHTKDV*DILHAE Trigger: TTCAGCATGCAGTATATCTCACACATCTTTGGTGTG...ACTATGGTGAGGCCTTGACCATGGCCAGAAGGATTTTCCTACAAAGCACTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | ATAACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCATTCCAGTGTATCCTTTaGGAATTGTATCATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITVDETSSPRDAYTDTQAFQCIL*ELYHLL Trigger: AAGGAGATGATACAATTCTCAAAGGATACACTGGAA...TGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR TCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCTGCCCCACTTCGATGTaGCCAGCATGCCAGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSCPTSM*PACQLV Trigger: TACCAACTGGCATGCTGGTCACATCGAAGTGGGGCA...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCAGCCCCTTCTGGCAGTaGTCACAGGAGCAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSSPFWQ*SQEQSK Trigger: CTTTGACTGCTCCTGTGAGCACTGCCAGAAGGGGCT...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCAGCTCCATCTCTGTCTaGATCCGCATGGCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSSSISV*IRMAAM Trigger: CATGGCTGCCATGCGGATGCAGACAGAGATGGAGCT...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173730.2 |
||
| CDS-3UTR CCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATCATCAACCATCCTCCTaGCATAATGTGAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHHQPSS*HNVRPP Trigger: AGGAGGCCTCACATTATGCCAGGAGGATGGTTGATG...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACATACATGAATTCGTTTTaGCGGAACATACGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDPCIFLGITEYISKGQTYMNSF*RNIRSS Trigger: GGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTA...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| 3UTR CAA 72 bp | AAGGTAAAGATTCCCTTTCAGAAAGGTAAATCTGGTTaGTATGCACGTGAACTGAGACGAAGAAACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVKIPFQKGKSG*YARELRRRNPG Trigger: CCCTGGGTTTCTTCGTCTCAGTTCACGTGCATACAAACCAGATTTACCTTTCTGAAAGGGAATCTTTACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173297.2 |
||
| CDS-3UTR TCA 90 bp | TGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATATCCTCATCTGCGTGTaGAACATGGATTTCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CIELTMAFTIMLCLVCLHILICV*NMDFTA Trigger: GGCAGTGAAATCCATGTTTCACACGCAGATGAGGAT...ATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCTCCTCCTCCCCAAAGTaGTCCACGTGGTTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSSSSPK*STWFCK Trigger: CTTACAGAACCACGTGGAGCACTTTGGGGAGGAGGA...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCGAACTGCTGGCTCTGTaGTGGCCAGTACTGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSELLAL*WPVLQE Trigger: TTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTC...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| 3UTR CAA 72 bp | GAGATGTCAGTGGTAGCACAAGGTTTCGTAGAAGTTTaGGTGACACCCTCAACCAAAAGAATTTACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: EMSVVAQGFVEV*VTPSTKRIYFM Trigger: CATGAAGTAAATTCTTTTGGTTGAGGGTGTCACCAAAACTTCTACGAAACCTTGTGCTACCACTGACATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR TCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCCTTTCCCATATTTCTTaGTGGCAGCGCACTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSLSHIS*WQRTRS Trigger: AGAACGAGTGCGCTGCCATCAAGAAATATGGGAAAG...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCATGTGTGAGATATACTaGATGCTGAACTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWHLLLCCALFVYIFLSSMCEIY*MLNCWL Trigger: GAGCCAGCAGTTCAGCATGCAGTATATCTCACACAT...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS CCA 90 bp | CACTGCCCGCAGCGATGGAGCTTCTCCTGCCTCTTGAAGCAGGTGTaGCACACGAAGTTAATGAGGCTCTGCCAGCCTCCACAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HCPQRWSFSCLLKQV*HTKLMRLCQPPQAS Trigger: GGAGGCCTGTGGAGGCTGGCAGAGCCTCATTAACTTCGTGTGCCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCGCTGCGGGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114188.3 |
||
| CDS TCA 90 bp | CCTCCTCATAGGCCTGGAGGTAGGAGAGGACCTCTGATGCAATGCTaGGCAGCCGAAGCACGTAGAGGTTGGTGTCGGCGAACACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPHRPGGRRGPLMQC*AAEARRGWCRRTLA Trigger: AGCCAGTGTTCGCCGACACCAACCTCTACGTGCTTCGGCTGCTCAGCATTGCATCAGAGGTCCTCTCCTACCTCCAGGCCTATGAGGAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 90 bp | CAGCGCACTCGTTCTTGTGATTCAGCCAAGCATCCTTCTGGCACGTaGGGTCGCAGTAATGGGCGAACTTGCACTGCCCGCAGCGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRTRSCDSAKHPSGT*GRSNGRTCTARSDG Trigger: TCCATCGCTGCGGGCAGTGCAAGTTCGCCCATTACTGCGACCGCACGTGCCAGAAGGATGCTTGGCTGAATCACAAGAACGAGTGCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 90 bp | GTGTCCACGTCTACTCGGAGTTCCTTCTGCTCCTCCTCCCCAAAGTaGTCCACGTGGTTCTGTAAGTCATCCACGGACACCAGGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSTSTRSSFCSSSPK*STWFCKSSTDTRQP Trigger: GGGCTGCCTGGTGTCCGTGGATGACTTACAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAAGGAACTCCGAGTAGACGTGGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCACCTCCCTCGCCTTCTGAGATCTaGCCCAGGGCCCGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLAQVLPPPDTHTNSPPSPSEI*PRARSS Trigger: TGAGCTCCGGGCCCTGGGCAAGATCTCAGAAGGCGA...GGGAGGTGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | GATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGTCGCCTTCTGAGATCTaGCCCAGGGCCCGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DETSSPRDAYTDTQAVTWSPSEI*PRARSS Trigger: TGAGCTCCGGGCCCTGGGCAAGATCTCAGAAGGCGA...CCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS TCA 90 bp | GAGGTGCAGGAAGTCTATGTAGGACACAGTCAGCTCCTCGCCTTCTaGGATCTTGCCCAGGGCCCGGAGCTCAATCCTCATCTGCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EVQEVYVGHSQLLAF*DLAQGPELNPHLRV Trigger: CACACGCAGATGAGGATTGAGCTCCGGGCCCTGGGCAAGATCTCAGAAGGCGAGGAGCTGACTGTGTCCTACATAGACTTCCTGCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CCCGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCTCGCCTTCTGAGATCTaGCCCAGGGCCCGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PDTHTNSPPLNKPLCIELSPSEI*PRARSS Trigger: TGAGCTCCGGGCCCTGGGCAAGATCTCAGAAGGCGA...GAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 90 bp | GGCCAGTACTGCAAGAACGTGTCCACGTCTACTCGGAGTTCCTTCTaGTCCTCCTCCCCAAAGTGCTCCACGTGGTTCTGTAAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GQYCKNVSTSTRSSF*SSSPKCSTWFCKSS Trigger: GGATGACTTACAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAAGGAACTCCGAGTAGACGTGGACACGTTCTTGCAGTACTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 90 bp | GGAAGTCTATGTAGGACACAGTCAGCTCCTCGCCTTCTGAGATCTTaGCCAGGGCCCGGAGCTCAATCCTCATCTGCGTGTGAAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLCRTQSAPRLLRS*PGPGAQSSSACETW Trigger: CCATGTTTCACACGCAGATGAGGATTGAGCTCCGGGCCCTGGGCAAGATCTCAGAAGGCGAGGAGCTGACTGTGTCCTACATAGACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114188.3 |
||
| CDS CCA 90 bp | TTGGCGGATCTCTGTGAGCTCCAAGACAGCCAGGGCTCCATGGTGTaGCTGGTCTGTCAAAAACCACTGCAGAATAAGCCCTCTCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LADLCELQDSQGSMV*LVCQKPLQNKPSPQ Trigger: TTGCGGAGAGGGCTTATTCTGCAGTGGTTTTTGACAGACCAGCCACACCATGGAGCCCTGGCTGTCTTGGAGCTCACAGAGATCCGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS CCA 90 bp | CAGAGTTGGCGGATCTCTGTGAGCTCCAAGACAGCCAGGGCTCCATaGTGTGGCTGGTCTGTCAAAAACCACTGCAGAATAAGCCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSWRISVSSKTARAP*CGWSVKNHCRISPL Trigger: GAGAGGGCTTATTCTGCAGTGGTTTTTGACAGACCAGCCACACCATGGAGCCCTGGCTGTCTTGGAGCTCACAGAGATCCGCCAACTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS TCA 90 bp | GAGGTGCAGGAAGTCTATGTAGGACACAGTCAGCTCCTCGCCTTCTaGGATCTTGCCCAGGGCCCGGAGCTCAATCTTGCCATTGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVQEVYVGHSQLLAF*DLAQGPELNLAIVE Trigger: TTCAACAATGGCAAGATTGAGCTCCGGGCCCTGGGCAAGATCTCAGAAGGCGAGGAGCTGACTGTGTCCTACATAGACTTCCTGCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114186.9 |
||
| CDS GCA 90 bp | GAGATATACTGCATGCTGAACTGCTGGCTCTGTGGTGGCCAGTACTaGAAGAACGTGTCCACGTCTACTCGGAGTTCCTTCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIYCMLNCWLCGGQY*KNVSTSTRSSFCSS Trigger: GGAGGAGCAGAAGGAACTCCGAGTAGACGTGGACACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTATATCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 90 bp | AAGACAGCCAGGGCTCCATGGTGTGGCTGGTCTGTCAAAAACCACTaGAGAATAAGCCCTCTCCGCAAAGATGACATCCGCAGCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KTARAPWCGWSVKNH*RISPLRKDDIRSPE Trigger: TTCTGGGCTGCGGATGTCATCTTTGCGGAGAGGGCTTATTCTGCAGTGGTTTTTGACAGACCAGCCACACCATGGAGCCCTGGCTGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
||
| CDS-3UTR CAA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCACCTGCATGGGCTGGTaGTTCAGGGCAGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KTTGSQDPCIFLGITEYITCMGW*FRAASR Trigger: GCGAGAGGCTGCCCTGAACAACCAGCCCATGCAGGT...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS TCA 90 bp | GCATGGGCTGGTTGTTCAGGGCAGCCTCTCGCATCTTGTGATACATaGATTCGTTTTGGCGGAACATACGCAGCTCCATCTCTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AWAGCSGQPLASCDT*IRFGGTYAAPSLSA Trigger: TGCAGACAGAGATGGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTATCACAAGATGCGAGAGGCTGCCCTGAACAACCAGCCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGCACAGCCATGCCCAGTaGGGCATTGTTATGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CLISALVHQNGVDADGEGHSHAQ*GIVMVV Trigger: TACCACCATAACAATGCCCAACTGGGCATGGCTGTG...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCATACATGAATTCGTTTaGGCGGAACATACGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NDSGGHRVVISSAPQPQPIHEFV*AEHTQL Trigger: GAGCTGCGTATGTTCCGCCAAAACGAATTCATGTAT...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
||
| CDS TCA 90 bp | ATGACCTGCATGGGCTGGTTGTTCAGGGCAGCCTCTCGCATCTTGTaGTACATGAATTCGTTTTGGCGGAACATACGCAGCTCCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MTCMGWLFRAASRIL*YMNSFWRNIRSSIS Trigger: AGAGATGGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTATCACAAGATGCGAGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
||
| CDS-3UTR CAA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACATGGCCTCTAAGTCTTaGGTGATAGGGTGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHMASKS*VIGWEG Trigger: ACCCTCCCACCCTATCACCAAAGACTTAGAGGCCAT...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 90 bp | CAGTTGATCACACCAAAGATGTGTGAGATATACTGCATGCTGAACTaGTGGCTCTGTGGTGGCCAGTACTGCAAGAACGTGTCCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLITPKMCEIYCMLN*WLCGGQYCKNVSTS Trigger: AGACGTGGACACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTATATCTCACACATCTTTGGTGTGATCAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS CCA 90 bp | CATTGTTATGGTGGTAGAGTTTCATGTAGCCATCAACCATCCTCCTaGCATAATGTGAGGCCTCCTCATAGGCCTGGAGGTAGGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HCYGGRVSCSHQPSS*HNVRPPHRPGGRRG Trigger: TCCTCTCCTACCTCCAGGCCTATGAGGAGGCCTCACATTATGCCAGGAGGATGGTTGATGGCTACATGAAACTCTACCACCATAACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTGATTAGTGCTCTGGTTCACCAAAATGGGGTGGATGCAGATGGTGAGGGGACTTTCCCATATTTCTaGATGGCAGCGCACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLISALVHQNGVDADGEGTFPYF*MAAHSF Trigger: GAACGAGTGCGCTGCCATCAAGAAATATGGGAAAGT...CCCCTCACCATCTGCATCCACCCCATTTTGGTGAACCAGAGCACTAATCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | TACCTGCCACTCTTAGCTCAGGTGTTACCCCCACCCGATACACACACAAACTCAACTTTCCCATATTTCTaGATGGCAGCGCACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YLPLLAQVLPPPDTHTNSTFPYF*MAAHSF Trigger: GAACGAGTGCGCTGCCATCAAGAAATATGGGAAAGT...TGAGTTTGTGTGTGTATCGGGTGGGGGTAACACCTGAGCTAAGAGTGGCAGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 90 bp | GTGAAACCGTTGCAGTTGATCACACCAAAGATGTGTGAGATATACTaGATGCTGAACTGCTGGCTCTGTGGTGGCCAGTACTGCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VKPLQLITPKMCEIY*MLNCWLCGGQYCKN Trigger: GTTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTATATCTCACACATCTTTGGTGTGATCAACTGCAACGGTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS CCA 90 bp | TTGATCACACCAAAGATGTGTGAGATATACTGCATGCTGAACTGCTaGCTCTGTGGTGGCCAGTACTGCAAGAACGTGTCCACGTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: LITPKMCEIYCMLNC*LCGGQYCKNVSTST Trigger: AGTAGACGTGGACACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTATATCTCACACATCTTTGGTGTGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACACTTTCCCATATTTCTaGATGGCAGCGCACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHTFPYF*MAAHSF Trigger: GAACGAGTGCGCTGCCATCAAGAAATATGGGAAAGT...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACAGCCTGATGTTCTCGTaGGGCACTTTCCCATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHSLMFS*GTFPYF Trigger: GAAATATGGGAAAGTGCCCAACGAGAACATCAGGCT...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCATGGCCTCTAAGTCTTaGGTGATAGGGTGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KTTGSQDPCIFLGITEYIMASKS*VIGWEG Trigger: ACCCTCCCACCCTATCACCAAAGACTTAGAGGCCAT...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | AACGACAGTGGAGGACACAGAGTAGTCATTTCCTCAGCTCCCCAGCCACAGCCCTCAATCTTGCCATTGTaGAATATGACAGTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NDSGGHRVVISSAPQPQPSILPL*NMTVQF Trigger: AAACTGCACTGTCATATTCAACAATGGCAAGATTGA...GGGCTGTGGCTGGGGAGCTGAGGAAATGACTACTCTGTGTCCTCCACTGTCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCCCAGAGATGCCTACACAGATACACAAGCAGTCACCTGGGATTCTAGGAGCTCAATCTTGCCATaGTTGAATATGACAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPRDAYTDTQAVTWDSRSSILP*LNMTVQ Trigger: CTGCACTGTCATATTCAACAATGGCAAGATTGAGCT...CCTAGAATCCCAGGTGACTGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | ATAACTGTAGATGAGACCAGCAGCCCCAGAGATGCCTACACAGATACACAAGCAAGCCTGATGTTCTCGTaGGGCACTTTCCCATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITVDETSSPRDAYTDTQASLMFS*GTFPYF Trigger: GAAATATGGGAAAGTGCCCAACGAGAACATCAGGCT...TGCTTGTGTATCTGTGTAGGCATCTCTGGGGCTGCTGGTCTCATCTACAGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CGATACACACACAAACTCACCTCCCCTAAACAAACCCCTCTGCATAGAGCTCACATACATGAATTCGTTTaGGCGGAACATACGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RYTHKLTSPKQTPLHRAHIHEFV*AEHTQL Trigger: GAGCTGCGTATGTTCCGCCAAAACGAATTCATGTAT...GTGAGCTCTATGCAGAGGGGTTTGTTTAGGGGAGGTGAGTTTGTGTGTGTATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACACACAGCCATGCCCAGTaGGGCATTGTTATGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QDPCIFLGITEYISKGQTHSHAQ*GIVMVV Trigger: TACCACCATAACAATGCCCAACTGGGCATGGCTGTG...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTCACAGCCATGCCCAGTaGGGCATTGTTATGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFHSHAQ*GIVMVV Trigger: TACCACCATAACAATGCCCAACTGGGCATGGCTGTG...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTATGGCCTCTAAGTCTTaGGTGATAGGGTGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFMASKS*VIGWEG Trigger: ACCCTCCCACCCTATCACCAAAGACTTAGAGGCCAT...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS-3UTR CAA 90 bp | CCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTACATTTTTCTTTCTAGCACCTGCATGGGCTGGTaGTTCAGGGCAGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PWHLLLCCALFVYIFLSSTCMGW*FRAASR Trigger: GCGAGAGGCTGCCCTGAACAACCAGCCCATGCAGGT...GCTAGAAAGAAAAATGTAAACAAACAAGGCACAGCATAATAGTAAATGCCATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
||
| CDS-3UTR CAA 90 bp | AAGACCACAGGATCCCAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCATACATGAATTCGTTTaGGCGGAACATACGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KTTGSQDPCIFLGITEYIIHEFV*AEHTQL Trigger: GAGCTGCGTATGTTCCGCCAAAACGAATTCATGTAT...GATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTGGGATCCTGTGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCATAGAGCTCACCATGGCATTTACTATTATGCTGTGCCTTGTTTGTTTGCCCGGAGCTCAATCTaGCCATTGTTGAATATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLHRAHHGIYYYAVPCLFARSSI*PLLNMT Trigger: TGTCATATTCAACAATGGCAAGATTGAGCTCCGGGC...AAACAAACAAGGCACAGCATAATAGTAAATGCCATGGTGAGCTCTATGCAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114186.9 |
||
| CDS-3UTR CAA 90 bp | CAAGATCCCTGCATCTTTCTAGGCATCACTGAGTATATCTCAAAGGGTCAAACAATACATGAATTCGTTTaGGCGGAACATACGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QDPCIFLGITEYISKGQTIHEFV*AEHTQL Trigger: GAGCTGCGTATGTTCCGCCAAAACGAATTCATGTAT...TGTTTGACCCTTTGAGATATACTCAGTGATGCCTAGAAAGATGCAGGGATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
||
| CDS GCA 72 bp | CCTTCTGGCACGTGCGGTCGCAGTAATGGGCGAACTTaGACTGCCCGCAGCGATGGAGCTTCTCCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSGTCGRSNGRT*TARSDGASPAS Trigger: AGAGGCAGGAGAAGCTCCATCGCTGCGGGCAGTGCAAGTTCGCCCATTACTGCGACCGCACGTGCCAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 72 bp | CACCACTTCCTGGGAGGGCTTGGGGTCTTCCTTCGCTaGCAGGAAGAGGTCGTCCTTCAGCCCCTTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HHFLGGLGVFLR*QEEVVLQPLLA Trigger: TGCCAGAAGGGGCTGAAGGACGACCTCTTCCTGGCAGCGAAGGAAGACCCCAAGCCCTCCCAGGAAGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS TCA 72 bp | AGGCCTGGAGGTAGGAGAGGACCTCTGATGCAATGCTaGGCAGCCGAAGCACGTAGAGGTTGGTGTCGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RPGGRRGPLMQC*AAEARRGWCRR Trigger: TCGCCGACACCAACCTCTACGTGCTTCGGCTGCTCAGCATTGCATCAGAGGTCCTCTCCTACCTCCAGGCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS TCA 72 bp | GGCCTCCTCATAGGCCTGGAGGTAGGAGAGGACCTCTaGTGCAATGCTGAGCAGCCGAAGCACGTAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLLIGLEVGEDL*CNAEQPKHVEV Trigger: AACCTCTACGTGCTTCGGCTGCTCAGCATTGCATCAGAGGTCCTCTCCTACCTCCAGGCCTATGAGGAGGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 72 bp | CGTTCTTGTGATTCAGCCAAGCATCCTTCTGGCACGTaGGGTCGCAGTAATGGGCGAACTTGCACTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSCDSAKHPSGT*GRSNGRTCTAR Trigger: GCGGGCAGTGCAAGTTCGCCCATTACTGCGACCGCACGTGCCAGAAGGATGCTTGGCTGAATCACAAGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 72 bp | AGCAATCATGGTTCACCAGGCCCAGGTTGGGGAAGATaGCCACACCTACTGCCTGTAGCCCTCTCTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SNHGSPGPGWGR*PHLLPVALSGH Trigger: GTGACCAGAGAGGGCTACAGGCAGTAGGTGTGGGCATCTTCCCCAACCTGGGCCTGGTGAACCATGATTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS GCA 72 bp | GCGAACTTGCACTGCCCGCAGCGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGGCACACGAAGTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: ANLHCPQRWSFS*LLKQVWHTKLM Trigger: CATTAACTTCGTGTGCCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCGCTGCGGGCAGTGCAAGTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
||
| CDS CAA 72 bp | GCCCAGAACTCCTTCGTAGCCTTCAGACCTCTGCCTTaGCCCTCGGAAGTGAAGACCTCCACGTTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: AQNSFVAFRPLP*PSEVKTSTFSM Trigger: CATGGAGAACGTGGAGGTCTTCACTTCCGAGGGCAAAGGCAGAGGTCTGAAGGCTACGAAGGAGTTCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000129630.3 |
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| CDS CAA 72 bp | CACTGCTTCTTATGGAACAGAGCGGGGGCTGGTTCATaGCTAGGCTCAGCCATGACCTGCATGGGCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: HCFLWNRAGAGS*LGSAMTCMGWL Trigger: CAACCAGCCCATGCAGGTCATGGCTGAGCCTAGCAATGAACCAGCCCCCGCTCTGTTCCATAAGAAGCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS CAA 90 bp | ACATCCGCAGCCCAGAACTCCTTCGTAGCCTTCAGACCTCTGCCTTaGCCCTCGGAAGTGAAGACCTCCACGTTCTCCATGCTGCCTATT | + |
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Preference number: 6 (lower is better) Translates to: TSAAQNSFVAFRPLP*PSEVKTSTFSMLPI Trigger: AATAGGCAGCATGGAGAACGTGGAGGTCTTCACTTCCGAGGGCAAAGGCAGAGGTCTGAAGGCTACGAAGGAGTTCTGGGCTGCGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000129630.3 |
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| CDS GCA 72 bp | TGCAAGAACGTGTCCACGTCTACTCGGAGTTCCTTCTaGTCCTCCTCCCCAAAGTGCTCCACGTGGTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: CKNVSTSTRSSF*SSSPKCSTWFC Trigger: ACAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAAGGAACTCCGAGTAGACGTGGACACGTTCTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS CCA 72 bp | ATTGTATCATCTCCTTCACCACTTCCTGGGAGGGCTTaGGGTCTTCCTTCGCTGCCAGGAAGAGGTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: IVSSPSPLPGRA*GLPSLPGRGRP Trigger: AGGACGACCTCTTCCTGGCAGCGAAGGAAGACCCCAAGCCCTCCCAGGAAGTGGTGAAGGAGATGATACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS CCA 72 bp | CTCTGTGAGCTCCAAGACAGCCAGGGCTCCATGGTGTaGCTGGTCTGTCAAAAACCACTGCAGAATAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LCELQDSQGSMV*LVCQKPLQNKP Trigger: GGGCTTATTCTGCAGTGGTTTTTGACAGACCAGCCACACCATGGAGCCCTGGCTGTCTTGGAGCTCACAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
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| CDS CAA 72 bp | AATTGTATCATCTCCTTCACCACTTCCTGGGAGGGCTaGGGGTCTTCCTTCGCTGCCAGGAAGAGGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: NCIISFTTSWEG*GSSFAARKRSS Trigger: GGACGACCTCTTCCTGGCAGCGAAGGAAGACCCCAAGCCCTCCCAGGAAGTGGTGAAGGAGATGATACAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS GCA 72 bp | AGGGCTCCATGGTGTGGCTGGTCTGTCAAAAACCACTaGAGAATAAGCCCTCTCCGCAAAGATGACATCCGC | + |
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Preference number: 6 (lower is better) Translates to: RAPWCGWSVKNH*RISPLRKDDIR Trigger: GCGGATGTCATCTTTGCGGAGAGGGCTTATTCTGCAGTGGTTTTTGACAGACCAGCCACACCATGGAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
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| CDS CCA 72 bp | GGGAAGATGCCCACACCTACTGCCTGTAGCCCTCTCTaGTCACTGAGAGTGAAACCGTTGCAGTTGATCACA | + |
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Preference number: 6 (lower is better) Translates to: GKMPTPTACSPL*SLRVKPLQLIT Trigger: TGTGATCAACTGCAACGGTTTCACTCTCAGTGACCAGAGAGGGCTACAGGCAGTAGGTGTGGGCATCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS CCA 72 bp | CGGATCTCTGTGAGCTCCAAGACAGCCAGGGCTCCATaGTGTGGCTGGTCTGTCAAAAACCACTGCAGAATA | + |
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Preference number: 6 (lower is better) Translates to: RISVSSKTARAP*CGWSVKNHCRI Trigger: TATTCTGCAGTGGTTTTTGACAGACCAGCCACACCATGGAGCCCTGGCTGTCTTGGAGCTCACAGAGATCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129630.3 |
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| CDS TCA 72 bp | TTCCCATATTTCTTGATGGCAGCGCACTCGTTCTTGTaGTTCAGCCAAGCATCCTTCTGGCACGTGCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: FPYFLMAAHSFL*FSQASFWHVRS Trigger: CGACCGCACGTGCCAGAAGGATGCTTGGCTGAATCACAAGAACGAGTGCGCTGCCATCAAGAAATATGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS TCA 72 bp | TTTCATGTAGCCATCAACCATCCTCCTGGCATAATGTaGGGCCTCCTCATAGGCCTGGAGGTAGGAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FHVAINHPPGIM*GLLIGLEVGED Trigger: GTCCTCTCCTACCTCCAGGCCTATGAGGAGGCCTCACATTATGCCAGGAGGATGGTTGATGGCTACATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS GCA 72 bp | TCGTTTTGGCGGAACATACGCAGCTCCATCTCTGTCTaGATCCGCATGGCCTCTAAGTCTTTGGTGATAGGG | + |
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Preference number: 6 (lower is better) Translates to: SFWRNIRSSISV*IRMASKSLVIG Trigger: CCCTATCACCAAAGACTTAGAGGCCATGCGGATGCAGACAGAGATGGAGCTGCGTATGTTCCGCCAAAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS CAA 90 bp | GTTGTTCAGGGCAGCCTCTCGCATCTTGTGATACATGAATTCGTTTaGGCGGAACATACGCAGCTCCATCTCTGTCTGCATCCGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: VVQGSLSHLVIHEFV*AEHTQLHLCLHPHG Trigger: GCCATGCGGATGCAGACAGAGATGGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTATCACAAGATGCGAGAGGCTGCCCTGAACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS TCA 72 bp | ATGGGCTGGTTGTTCAGGGCAGCCTCTCGCATCTTGTaGTACATGAATTCGTTTTGGCGGAACATACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: MGWLFRAASRIL*YMNSFWRNIRS Trigger: GCTGCGTATGTTCCGCCAAAACGAATTCATGTATCACAAGATGCGAGAGGCTGCCCTGAACAACCAGCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS CCA 72 bp | CCAAAGATGTGTGAGATATACTGCATGCTGAACTGCTaGCTCTGTGGTGGCCAGTACTGCAAGAACGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PKMCEIYCMLNC*LCGGQYCKNVS Trigger: GGACACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTATATCTCACACATCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS TCA 72 bp | GGTTGTTCAGGGCAGCCTCTCGCATCTTGTGATACATaGATTCGTTTTGGCGGAACATACGCAGCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: GCSGQPLASCDT*IRFGGTYAAPS Trigger: AGATGGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTATCACAAGATGCGAGAGGCTGCCCTGAACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS GCA 72 bp | GTGGCACACGAAGTTAATGAGGCTGTCAAAAACCACTaGAGAATAAGCCCTCTCCGCAAAGATGACATCCGC | + |
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Preference number: 6 (lower is better) Translates to: VAHEVNEAVKNH*RISPLRKDDIR Trigger: GCGGATGTCATCTTTGCGGAGAGGGCTTATTCTGCAGTGGTTTTTGACAGCCTCATTAACTTCGTGTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 |
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| CDS GCA 72 bp | ACACCAAAGATGTGTGAGATATACTGCATGCTGAACTaGTGGCTCTGTGGTGGCCAGTACTGCAAGAACGTG | + |
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Preference number: 6 (lower is better) Translates to: TPKMCEIYCMLN*WLCGGQYCKNV Trigger: CACGTTCTTGCAGTACTGGCCACCACAGAGCCAGCAGTTCAGCATGCAGTATATCTCACACATCTTTGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS CAA 72 bp | GGCAGCCTCTCGCATCTTGTGATACATGAATTCGTTTaGGCGGAACATACGCAGCTCCATCTCTGTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GSLSHLVIHEFV*AEHTQLHLCLH Trigger: ATGCAGACAGAGATGGAGCTGCGTATGTTCCGCCAAAACGAATTCATGTATCACAAGATGCGAGAGGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 ENSMUST00000173730.2 |
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| CDS CAA 72 bp | GCCTGTAGCCCTCTCTGGTCACTGAGAGTGAAACCGTaGCAGTTGATCACACCAAAGATGTGTGAGATATAC | + |
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Preference number: 6 (lower is better) Translates to: ACSPLWSLRVKP*QLITPKMCEIY Trigger: GTATATCTCACACATCTTTGGTGTGATCAACTGCAACGGTTTCACTCTCAGTGACCAGAGAGGGCTACAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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| CDS CAA 72 bp | AGCCCTCTCTGGTCACTGAGAGTGAAACCGTTGCAGTaGATCACACCAAAGATGTGTGAGATATACTGCATG | + |
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Preference number: 6 (lower is better) Translates to: SPLWSLRVKPLQ*ITPKMCEIYCM Trigger: CATGCAGTATATCTCACACATCTTTGGTGTGATCAACTGCAACGGTTTCACTCTCAGTGACCAGAGAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074301.10 ENSMUST00000114186.9 ENSMUST00000114188.3 |
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