Pregenerated sensors for SMURF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038780Ensembl transcript IDs: ENSMUST00000085684.11, ENSMUST00000100461.7, ENSMUST00000110677.8, ENSMUST00000198621.2
Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCACACGCTCCATCACACCTGCTTTGTGCACAGCCCCGACCCTaGGGAGCTGCATCAGGGGCCCAGGTCAGCGGCCTCTCCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: LPHAPSHLLCAQPRP*GAASGAQVSGLSCC Trigger: ACAGCAGGAGAGGCCGCTGACCTGGGCCCCTGATGCAGCTCCCCAGGGTCGGGGCTGTGCACAAAGCAGGTGTGATGGAGCGTGTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | TCCTCTCTGAAGCACTGCGGAGTAGAGTGGTGTCTGCTGCGTCCCTaGGTGTGGGTGCCGGCCGCTGGTGAGGAGAGCCTGCGGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SSLKHCGVEWCLLRP*VWVPAAGEESLRSQ Trigger: CTGGCTCCGCAGGCTCTCCTCACCAGCGGCCGGCACCCACACTCAGGGACGCAGCAGACACCACTCTACTCCGCAGTGCTTCAGAGAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR CCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTaGAATCTCAGGCCTCAGCCCGCCACGCGGGAGGCGTGCAGACGC | + |
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Preference number: 1 (lower is better) Translates to: ALSKGGGRRAFSLGF*NLRPQPATREACRR Trigger: GCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGGCCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| 3UTR CCA 90 bp | CACACCGTCAGAAGGCTGCCATGTGGCCCACAGGCTGCAGTAGGGTaGGGCGTGTTCTCTGCAGAAGGTCAGTCCAGCGCCCACCTGACC | + |
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Preference number: 1 (lower is better) Translates to: HTVRRLPCGPQAAVG*GVFSAEGQSSAHLT Trigger: GGTCAGGTGGGCGCTGGACTGACCTTCTGCAGAGAACACGCCCCACCCTACTGCAGCCTGTGGGCCACATGGCAGCCTTCTGACGGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR GCA 90 bp | ATCTCAGGCCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATaGTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGCCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: ISGLSPPRGRRADAI*FGSGGCEQDSVATG Trigger: GCCAGTGGCCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGGCCTGAGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| 3UTR GCA 90 bp | CGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTaGCGTGGGCTGGCCACGCAGTGTTCTTTGAGGGGCGTCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: RERASPRPKQGNQEL*RGLATQCSLRGVRR Trigger: CCTTCTGACGCCCCTCAAAGAACACTGCGTGGCCAGCCCACGGCACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR CCA 90 bp | AAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTGCCGTaGGCTGGCCACGCAGTGTTCTTTGAGGGGCGTCAGAAGGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: KGFTQTQAGQPGAVP*AGHAVFFEGRQKGL Trigger: TAGGCCCTTCTGACGCCCCTCAAAGAACACTGCGTGGCCAGCCCACGGCACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | AGGGCAACCAGGAGCTGTGCCGTGGGCTGGCCACGCAGTGTTCTTTaGGGGGCGTCAGAAGGGCCTAACCATGGTAGACAGACAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RATRSCAVGWPRSVL*GASEGPNHGRQTRK Trigger: CTTCCTTGTCTGTCTACCATGGTTAGGCCCTTCTGACGCCCCTCAAAGAACACTGCGTGGCCAGCCCACGGCACAGCTCCTGGTTGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | GCAGGGTCAGTAATCCACCTTGTGGCAGATCCTCCTAACCAAGCATaGGACTGCGACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGT | + |
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Preference number: 1 (lower is better) Translates to: AGSVIHLVADPPNQA*DCDLLPQHCCSLAR Trigger: ACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGTCGCAGTCTCATGCTTGGTTAGGAGGATCTGCCACAAGGTGGATTACTGACCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR GCA 90 bp | TGCAGTGCATCCTCAGAGCACAGGACCCTGCAGACTGGGCCAGTGTaGAAAGGCAACAGGCAGTGTGTCCAGTCTCCGGAAGCGTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: CSASSEHRTLQTGPV*KGNRQCVQSPEACH Trigger: GTGACACGCTTCCGGAGACTGGACACACTGCCTGTTGCCTTTGCACACTGGCCCAGTCTGCAGGGTCCTGTGCTCTGAGGATGCACTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR CCA 90 bp | TGCAGAAGGTCAGTCCAGCGCCCACCTGACCTGAACCTGGCCATGTaGCCAAGCCAGTGCAGGGTCAGTAATCCACCTTGTGGCAGATCC | + |
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Preference number: 1 (lower is better) Translates to: CRRSVQRPPDLNLAM*PSQCRVSNPPCGRS Trigger: GGATCTGCCACAAGGTGGATTACTGACCCTGCACTGGCTTGGCCACATGGCCAGGTTCAGGTCAGGTGGGCGCTGGACTGACCTTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | GGTAGAAGCCTCAGTGGGTGGTATGTGCGCCAATCAGTCAGCCCCTaGGGGCCTAAGCTCTGGATCTTCCTCAGAGGGCATCTGACACAG | + |
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Preference number: 1 (lower is better) Translates to: GRSLSGWYVRQSVSP*GPKLWIFLRGHLTQ Trigger: CTGTGTCAGATGCCCTCTGAGGAAGATCCAGAGCTTAGGCCCTCAGGGGCTGACTGATTGGCGCACATACCACCCACTGAGGCTTCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR CCA 90 bp | CCTTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTaGCAACCCAGAGCGCAGCTGACTCCTATGCTGGACAAACCTCTT | + |
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Preference number: 1 (lower is better) Translates to: PCAVRSTWHPFCPQT*QPRAQLTPMLDKPL Trigger: AAGAGGTTTGTCCAGCATAGGAGTCAGCTGCGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR CCA 90 bp | TTGACATTCCTGCAGTGCATCCTCAGAGCACAGGACCCTGCAGACTaGGCCAGTGTGCAAAGGCAACAGGCAGTGTGTCCAGTCTCCGGA | + |
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Preference number: 1 (lower is better) Translates to: LTFLQCILRAQDPAD*ASVQRQQAVCPVSG Trigger: TCCGGAGACTGGACACACTGCCTGTTGCCTTTGCACACTGGCCCAGTCTGCAGGGTCCTGTGCTCTGAGGATGCACTGCAGGAATGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | GCTGGCTTTGGCCTTGCTCCTCAGAAGACAAGGAAGCAAGCAAGCTaGGGAGAACTGTTAGCATCACGTTGCCACTGGGGACGAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: AGFGLAPQKTRKQAS*GELLASRCHWGRGP Trigger: TGGCCCTCGTCCCCAGTGGCAACGTGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTCTGAGGAGCAAGGCCAAAGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | TCCTATGCTGGACAAACCTCTTGGGTTGGGGGCGTATGTGACCTATaGATCCACTCCCCATCACCTCAGCCCTGCTTCCAGACCACACTG | + |
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Preference number: 1 (lower is better) Translates to: SYAGQTSWVGGVCDL*IHSPSPQPCFQTTL Trigger: CAGTGTGGTCTGGAAGCAGGGCTGAGGTGATGGGGAGTGGATTCATAGGTCACATACGCCCCCAACCCAAGAGGTTTGTCCAGCATAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | TGCTGCTTAGAAATCCACCTGCTACCTGAACAGGCTGTGAGCCTGTaGTGGACGCCTCTGGAACTTGAGCTCAGTAAGCTGTCGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: CCLEIHLLPEQAVSL*WTPLELELSKLSAA Trigger: AGCTGCCGACAGCTTACTGAGCTCAAGTTCCAGAGGCGTCCATCACAGGCTCACAGCCTGTTCAGGTAGCAGGTGGATTTCTAAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR GCA 90 bp | ACGGCCGCTGCAATTCCCTTACCTATCAAAGGGGAAAACACATCCTaGCTCGAGTGTCCTGCCACGGTGGAGTTCCAGCAAGCATACACT | + |
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Preference number: 1 (lower is better) Translates to: TAAAIPLPIKGENTS*LECPATVEFQQAYT Trigger: AGTGTATGCTTGCTGGAACTCCACCGTGGCAGGACACTCGAGGCAGGATGTGTTTTCCCCTTTGATAGGTAAGGGAATTGCAGCGGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR GCA 90 bp | CAATCACTTCCGTGGCACAAACAGTGTGACTTGACATTCCTGCAGTaGATCCTCAGAGCACAGGACCCTGCAGACTGGGCCAGTGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: QSLPWHKQCDLTFLQ*ILRAQDPADWASVQ Trigger: TTGCACACTGGCCCAGTCTGCAGGGTCCTGTGCTCTGAGGATGCACTGCAGGAATGTCAAGTCACACTGTTTGTGCCACGGAAGTGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR TCA 90 bp | CGAGGGAGCTGGGTTTTAGAACACCCTCGGAAGCATGAAGGTAGATaGAGTACAGAAGCCCTACTGGGGCAAGGCAGAATTGAGAGACTA | + |
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Preference number: 1 (lower is better) Translates to: RGSWVLEHPRKHEGR*STEALLGQGRIERL Trigger: TAGTCTCTCAATTCTGCCTTGCCCCAGTAGGGCTTCTGTACTTCATCTACCTTCATGCTTCCGAGGGTGTTCTAAAACCCAGCTCCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR CCA 90 bp | CTATCAAAGGGGAAAACACATCCTGCCTCGAGTGTCCTGCCACGGTaGAGTTCCAGCAAGCATACACTGTGCATTTACCTTCTGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LSKGKTHPASSVLPR*SSSKHTLCIYLLLL Trigger: AAGCAGCAGAAGGTAAATGCACAGTGTATGCTTGCTGGAACTCCACCGTGGCAGGACACTCGAGGCAGGATGTGTTTTCCCCTTTGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCTGGCCTGGGAGGTGGGGCGGGTTCGGTCCTTGTGCGGTGAGGTCTACCTGGAAAGTCCCCTGGCCTaGCCTCTCCAAAGGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLAWEVGRVRSLCGEVYLESPLA*PLQRRR Trigger: CCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTC...CAGGTAGACCTCACCGCACAAGGACCGAACCCGCCCCACCTCCCAGGCCAGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | TCCACTCCCCATCACCTCAGCCCTGCTTCCAGACCACACTGGACAGAAGCAGCACCGACCCTGGGGAGCTaGATCAGGGGCCCAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: STPHHLSPASRPHWTEAAPTLGS*IRGPGQ Trigger: CTGACCTGGGCCCCTGATGCAGCTCCCCAGGGTCGG...TGCTGCTTCTGTCCAGTGTGGTCTGGAAGCAGGGCTGAGGTGATGGGGAGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCGCTGTGAAGCCTGTGCAACCTGGACGTGGGGTTAGAGATGTGTTAGAGCCGACCCTGGGGAGCTaGATCAGGGGCCCAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VSAVKPVQPGRGVRDVLEPTLGS*IRGPGQ Trigger: CTGACCTGGGCCCCTGATGCAGCTCCCCAGGGTCGG...CTCTAACACATCTCTAACCCCACGTCCAGGTTGCACAGGCTTCACAGCGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCCCTAGGAAAGTCCCCTaGCCTGCCCTCTCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSPRKVP*PALSKG Trigger: TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGG...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGGCTGAGGGCGAAACCTaGCTGCGTTTTATTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: TCCHSTAAAWRVLSEALRAEGET*LRFIGW Trigger: CCATCCAATAAAACGCAGCCAGGTTTCGCCCTCAGC...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCATGCTTCCTGTGGACTaGCTGAGACTTAGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSMLPVD*LRLRAQ Trigger: CTGTGCCCTAAGTCTCAGCCAGTCCACAGGAAGCAT...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGATGGGTCTGGTGGTTGTaGGCAAGACTCTGTGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: INGWEPPRKVPWPALSKGWVWWL*ARLCGH Trigger: GTGGCCACAGAGTCTTGCTCACAACCACCAGACCCA...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTGCCCAGTGGCTGTGGTaGAAGGCTCTTCTGTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: QTEAWLPLCCESQRCEACAQWLW*KALLLV Trigger: AACTAACAGAAGAGCCTTGCACCACAGCCACTGGGC...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCTGCTGGCTTTGGCCTTaGTCCTCAGAAGACAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSCWLWP*SSEDKE Trigger: TTCCTTGTCTTCTGAGGAGCAAGGCCAAAGCCAGCA...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCTTGACATTCCTGCAGTaGATCCTCAGAGCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSLTFLQ*ILRAQD Trigger: GTCCTGTGCTCTGAGGATGCACTGCAGGAATGTCAA...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTGTTTTATTGGATGGGTaGTGGAGGGGTGGGCAAACT | + |
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Preference number: 2 (lower is better) Translates to: QTEAWLPLCCESQRCEACVLLDG*WRGGQT Trigger: AGTTTGCCCACCCCTCCATCACCCATCCAATAAAAC...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGCGTGCAGACGCCATATaGTTTGGGTCTGGTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: LCGEVYLASFLSPDLATQRADAI*FGSGGC Trigger: ACAACCACCAGACCCAAAGCATATGGCGTCTGCACG...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | CCATATAAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAAAGTCCCCTGGCCTaGCCTCTCCAAAGGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PYKSPFQDSQEPPDPQAQESPLA*PLQRRR Trigger: CCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTC...CTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTTATATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR CCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTCCTAGGAAAGTCCCCTaGCCTGCCCTCTCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RSYVKGLHPDPSRATRSCPRKVP*PALSKG Trigger: TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGG...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTAGGAAGCAAGCAAGCTaGGGAGAACTGTTAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: QTEAWLPLCCESQRCEACRKQAS*GELLAS Trigger: TGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCT...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTTCCTCAGAGGGCATCTaGCACAGGACTCCTAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RSYVKGLHPDPSRATRSCSSEGI*HRTPKA Trigger: AGCCTTAGGAGTCCTGTGTCAGATGCCCTCTGAGGA...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCCTGGACCCGGGGGTCTaGGGCTGGTTTTGGTTATTC | + |
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Preference number: 2 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGLDPGV*GWFWLF Trigger: GAATAACCAAAACCAGCCTCAGACCCCCGGGTCCAG...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGTGTGCATTTACCTTCTaGTGCTTAGAAATCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: AVRSTWHPFCPQTWQPRACAFTF*CLEIHL Trigger: CAGGTGGATTTCTAAGCAGCAGAAGGTAAATGCACA...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCAGCAAGCATACACTGTaGATTTACCTTCTGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSSKHTL*IYLLLL Trigger: AAGCAGCAGAAGGTAAATGCACAGTGTATGCTTGCT...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR CAA 90 bp | CCTGGACGTGGGGTTAGAGATGTGTTAGAGATGCTGGCTTTGGCCTaGCTCCTCAGAAGACAAGGAAGCAAGCAAGCTGAGGAGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: PGRGVRDVLEMLALA*LLRRQGSKQAEENC Trigger: ACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTCTGAGGAGCAAGGCCAAAGCCAGCATCTCTAACACATCTCTAACCCCACGTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR CCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTTCCCAATCACTTCCGTaGCACAAACAGTGTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: RSYVKGLHPDPSRATRSCSQSLP*HKQCDL Trigger: CAAGTCACACTGTTTGTGCCACGGAAGTGATTGGGA...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCGTTTTATTGGATGGGTaGTGGAGGGGTGGGCAAACT | + |
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Preference number: 2 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGVLLDG*WRGGQT Trigger: AGTTTGCCCACCCCTCCATCACCCATCCAATAAAAC...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTCGTGCAGACGCCATATaGTTTGGGTCTGGTGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: HFPIPSLRVSNRKNTKAGRADAI*FGSGGC Trigger: ACAACCACCAGACCCAAAGCATATGGCGTCTGCACG...ACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGACAAGGAAGCAAGCAAGCTGAGGAGAACTGTTAGCATCACGTTGCCACTGGCCCAGTGGCTGTGGTaGAAGGCTCTTCTGTTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: EDKEASKLRRTVSITLPLAQWLW*KALLLV Trigger: AACTAACAGAAGAGCCTTGCACCACAGCCACTGGGC...CAGTGGCAACGTGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAAACAAAAACAACAAAACCACAAACGGAGGCATGGCTGCCGCTCTGCTGTGTTTTCCCTCGGTTTCTaGAATCTCAGGCCTCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: HKQKQQNHKRRHGCRSAVFSLGF*NLRPQP Trigger: GGGCTGAGGCCTGAGATTCCAGAAACCGAGGGAAAA...CACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAAACAAAAACAACAAAACCACAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGTGTCCTGCCACGGTaGAGTTCCAGCAAGCATACA | + |
|
Preference number: 2 (lower is better) Translates to: HKQKQQNHKRRHGCRSAVSVLPR*SSSKHT Trigger: TGTATGCTTGCTGGAACTCCACCGTGGCAGGACACT...CACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATATAAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGAGCAAGCATACACTGTaGATTTACCTTCTGCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PYKSPFQDSQEPPDPQAQSKHTL*IYLLLL Trigger: AAGCAGCAGAAGGTAAATGCACAGTGTATGCTTGCT...CTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTTATATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | CAGAGACCACGCAACCCTCAGCGGCCCAGCGGCTCCTaGCCATGGGTCGATGCTCGCGGAGACACCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QRPRNPQRPSGS*PWVDARGDTTA Trigger: GGCTGTGGTGTCTCCGCGAGCATCGACCCATGGTCAGGAGCCGCTGGGCCGCTGAGGGTTGCGTGGTCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | GGAGCTGCATCAGGGGCCCAGGTCAGCGGCCTCTCCTaGTGTCCCGCCCAGTGGCTGTGGTGCAAGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GAASGAQVSGLS*CPAQWLWCKAL Trigger: AAGAGCCTTGCACCACAGCCACTGGGCGGGACAGCAGGAGAGGCCGCTGACCTGGGCCCCTGATGCAGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | GGCCTGGGAGGTGGGGCGGGTTCGGTCCTTGTGCGGTaGGGTCTACCTGGCATCCTTTCTGTCCCCAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: GLGGGAGSVLVR*GLPGILSVPRP Trigger: AGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAAGGACCGAACCCGCCCCACCTCCCAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | GCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTaGCGTGGGCTGGCCACGCAGTGTTCTTTGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASPRPKQGNQEL*RGLATQCSLRG Trigger: GCCCCTCAAAGAACACTGCGTGGCCAGCCCACGGCACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | ACCCAGACCCAAGCAGGGCAACCAGGAGCTGTGCCGTaGGCTGGCCACGCAGTGTTCTTTGAGGGGCGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQTQAGQPGAVP*AGHAVFFEGRQ Trigger: CTGACGCCCCTCAAAGAACACTGCGTGGCCAGCCCACGGCACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGTCCATCACACCTGCTTaGTGCACAGCCCCGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TCCHSTAAAWRVLSEALRSITPA*CTAPTL Trigger: CAGGGTCGGGGCTGTGCACAAAGCAGGTGTGATGGA...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTGGCCTGGGAGGTGGGGCGGGTTCGGTCCTTGTGCGGTGAGGTCTACCTGACTGTTAGCATCACGTaGCCACTGGGGACGAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLAWEVGRVRSLCGEVYLTVSIT*PLGTRA Trigger: GGCCCTCGTCCCCAGTGGCAACGTGATGCTAACAGT...CAGGTAGACCTCACCGCACAAGGACCGAACCCGCCCCACCTCCCAGGCCAGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | AGTCTGGCCTGGGAGGTGGGGCGGGTTCGGTCCTTGTaGGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLAWEVGRVRSL*GEVYLASFLSP Trigger: TGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAAGGACCGAACCCGCCCCACCTCCCAGGCCAGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | AAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTaGAATCTCAGGCCTCAGCCCGCCACGCGGGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KGGGRRAFSLGF*NLRPQPATREA Trigger: CGCCTCCCGCGTGGCGGGCTGAGGCCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | CTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATaGTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSPPRGRRADAI*FGSGGCEQDSV Trigger: CACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTACTGTTAGCATCACGTaGCCACTGGGGACGAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QTEAWLPLCCESQRCEACTVSIT*PLGTRA Trigger: GGCCCTCGTCCCCAGTGGCAACGTGATGCTAACAGT...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGATGCTGGCTTTGGCCTaGCTCCTCAGAAGACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TCCHSTAAAWRVLSEALRMLALA*LLRRQG Trigger: TCCTTGTCTTCTGAGGAGCAAGGCCAAAGCCAGCAT...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | ACAGACCTGGGAGGTTGTGACACTCAGAACTGGCAATaGGGGGACCCACAGGCGACGCAGGCACAACGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TDLGGCDTQNWQ*GDPQATQAQRL Trigger: CAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTCTGAGTGTCACAACCTCCCAGGTCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | AGGAGCTGTGCCGTGGGCTGGCCACGCAGTGTTCTTTaGGGGGCGTCAGAAGGGCCTAACCATGGTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RSCAVGWPRSVL*GASEGPNHGRQ Trigger: CTGTCTACCATGGTTAGGCCCTTCTGACGCCCCTCAAAGAACACTGCGTGGCCAGCCCACGGCACAGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | GGGGCCACCAGGAGGGCTGACGATCGAGATCTTACGTaGAAGGGCTTCACCCAGACCCAAGCAGGGCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: GATRRADDRDLT*KGFTQTQAGQP Trigger: TGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCTCGATCGTCAGCCCTCCTGGTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | CAGATCCTCCTAACCAAGCATGAGACTGCGACCTGCTaGCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QILLTKHETATC*HSTAAAWRVLS Trigger: AGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGTCGCAGTCTCATGCTTGGTTAGGAGGATCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | CCTTCCCACCGTGCCAAGGAGGCTGAGGGCGAAACCTaGCTGCGTTTTATTGGATGGGTGATGGAGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSHRAKEAEGET*LRFIGWVMEGW Trigger: CCACCCCTCCATCACCCATCCAATAAAACGCAGCCAGGTTTCGCCCTCAGCCTCCTTGGCACGGTGGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | GTGTCACTCTGCGGGGTCTGGATGCTTCCTGTGGACTaGCTGAGACTTAGGGCACAGGCTTCCTGGCGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VSLCGVWMLPVD*LRLRAQASWRL Trigger: AAGGCGCCAGGAAGCCTGTGCCCTAAGTCTCAGCCAGTCCACAGGAAGCATCCAGACCCCGCAGAGTGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | CTTTCTGTCCCCAGACCTGGCAACCCAGAGCGCAGCTaGCTCCTATGCTGGACAAACCTCTTGGGTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSVPRPGNPERS*LLCWTNLLGWG Trigger: CCCCCAACCCAAGAGGTTTGTCCAGCATAGGAGTCAGCTGCGCTCTGGGTTGCCAGGTCTGGGGACAGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | TCCTCAGAGCACAGGACCCTGCAGACTGGGCCAGTGTaGAAAGGCAACAGGCAGTGTGTCCAGTCTCCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSEHRTLQTGPV*KGNRQCVQSPE Trigger: TTCCGGAGACTGGACACACTGCCTGTTGCCTTTGCACACTGGCCCAGTCTGCAGGGTCCTGTGCTCTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | GTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTaGCAACCCAGAGCGCAGCTGACTCCTATGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VRSTWHPFCPQT*QPRAQLTPMLD Trigger: GTCCAGCATAGGAGTCAGCTGCGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | TCAGTCCAGCGCCCACCTGACCTGAACCTGGCCATGTaGCCAAGCCAGTGCAGGGTCAGTAATCCACCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SVQRPPDLNLAM*PSQCRVSNPPC Trigger: ACAAGGTGGATTACTGACCCTGCACTGGCTTGGCCACATGGCCAGGTTCAGGTCAGGTGGGCGCTGGACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCATGCTGGCTTTGGCCTaGCTCCTCAGAAGACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSMLALA*LLRRQG Trigger: TCCTTGTCTTCTGAGGAGCAAGGCCAAAGCCAGCAT...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | CTCAGTGGGTGGTATGTGCGCCAATCAGTCAGCCCCTaGGGGCCTAAGCTCTGGATCTTCCTCAGAGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSGWYVRQSVSP*GPKLWIFLRGH Trigger: ATGCCCTCTGAGGAAGATCCAGAGCTTAGGCCCTCAGGGGCTGACTGATTGGCGCACATACCACCCACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | GACATTCCTGCAGTGCATCCTCAGAGCACAGGACCCTaGAGACTGGGCCAGTGTGCAAAGGCAACAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: DIPAVHPQSTGP*RLGQCAKATGS Trigger: ACTGCCTGTTGCCTTTGCACACTGGCCCAGTCTGCAGGGTCCTGTGCTCTGAGGATGCACTGCAGGAATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | CCGTGGCACAAACAGTGTGACTTGACATTCCTGCAGTaGATCCTCAGAGCACAGGACCCTGCAGACTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PWHKQCDLTFLQ*ILRAQDPADWA Trigger: GGCCCAGTCTGCAGGGTCCTGTGCTCTGAGGATGCACTGCAGGAATGTCAAGTCACACTGTTTGTGCCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | AAGCTGTCGGCAGCTGCTGAACTTGAAAGGGGGCTTTaGGGCTCCAGTCAAGGGGAGCTAGCACAGAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: KLSAAAELERGL*GSSQGELAQRP Trigger: TGGTCTCTGTGCTAGCTCCCCTTGACTGGAGCCTCAAAGCCCCCTTTCAAGTTCAGCAGCTGCCGACAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | GGACAAACCTCTTGGGTTGGGGGCGTATGTGACCTATaGATCCACTCCCCATCACCTCAGCCCTGCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GQTSWVGGVCDL*IHSPSPQPCFQ Trigger: CTGGAAGCAGGGCTGAGGTGATGGGGAGTGGATTCATAGGTCACATACGCCCCCAACCCAAGAGGTTTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | AGGACAGTGCTGCACATGAACAGACCTGGGAGGTTGTaGCACTCAGAACTGGCAATGAGGGGACCCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RTVLHMNRPGRL*HSELAMRGPTG Trigger: GCCTGTGGGTCCCCTCATTGCCAGTTCTGAGTGTCACAACCTCCCAGGTCTGTTCATGTGCAGCACTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | CAGTTTAAAAATCCACACCGTCAGAAGGCTGCCATGTaGCCCACAGGCTGCAGTAGGGTGGGGCGTGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QFKNPHRQKAAM*PTGCSRVGRVL Trigger: GAGAACACGCCCCACCCTACTGCAGCCTGTGGGCCACATGGCAGCCTTCTGACGGTGTGGATTTTTAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGCAGACGCCATATGCTTaGGGTCTGGTGGTTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLQRRRETSLFPRFLESQQTPYA*GLVVVS Trigger: GCTCACAACCACCAGACCCAAAGCATATGGCGTCTG...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | ATGAAGTACAGAAGCCCTACTGGGGCAAGGCAGAATTaGGAGACTAGTAAGGCCCCAGTCTGGCCTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: MKYRSPTGARQN*ETSKAPVWPGR Trigger: CCTCCCAGGCCAGACTGGGGCCTTACTAGTCTCTCAATTCTGCCTTGCCCCAGTAGGGCTTCTGTACTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | GAAATCCACCTGCTACCTGAACAGGCTGTGAGCCTGTaGTGGACGCCTCTGGAACTTGAGCTCAGTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EIHLLPEQAVSL*WTPLELELSKL Trigger: CAGCTTACTGAGCTCAAGTTCCAGAGGCGTCCATCACAGGCTCACAGCCTGTTCAGGTAGCAGGTGGATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | CAGGATACTGCGAAAAGGAAGTACCTGGGCTTCCAGTaGCGGCCGCTGCAATTCCCTTACCTATCAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QDTAKRKYLGFQ*RPLQFPYLSKG Trigger: CCCCTTTGATAGGTAAGGGAATTGCAGCGGCCGTCACTGGAAGCCCAGGTACTTCCTTTTCGCAGTATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | GAGGGCCTAAGCTCTGGATCTTCCTCAGAGGGCATCTaGCACAGGACTCCTAAGGCTTGTCTCCCAATCACT | + |
|
Preference number: 3 (lower is better) Translates to: EGLSSGSSSEGI*HRTPKACLPIT Trigger: AGTGATTGGGAGACAAGCCTTAGGAGTCCTGTGTCAGATGCCCTCTGAGGAAGATCCAGAGCTTAGGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | AAGTGCAGCGCTACCAACAGAGGACAGTGCTGCACATaGACAGACCTGGGAGGTTGTGACACTCAGAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: KCSATNRGQCCT*TDLGGCDTQNW Trigger: CCAGTTCTGAGTGTCACAACCTCCCAGGTCTGTTCATGTGCAGCACTGTCCTCTGTTGGTAGCGCTGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | CCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTaGCCCGCAGGACCTCCCATTATTCCCCAGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: PEGKQQKEHKSW*PAGPPIIPQTT Trigger: GGTTGTCTGGGGAATAATGGGAGGTCCTGCGGGCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | CAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTaGTGGCCCGCAGGACCTCCCATTATTCCCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: QPEGKQQKEHKS*WPAGPPIIPQT Trigger: TGTCTGGGGAATAATGGGAGGTCCTGCGGGCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | TCTCCCAATCACTTCCGTGGCACAAACAGTGTGACTTaGCATTCCTGCAGTGCATCCTCAGAGCACAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SPNHFRGTNSVT*HSCSASSEHRT Trigger: GGTCCTGTGCTCTGAGGATGCACTGCAGGAATGTCAAGTCACACTGTTTGTGCCACGGAAGTGATTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | GCAATTCCCTTACCTATCAAAGGGGAAAACACATCCTaGCTCGAGTGTCCTGCCACGGTGGAGTTCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AIPLPIKGENTS*LECPATVEFQQ Trigger: TTGCTGGAACTCCACCGTGGCAGGACACTCGAGGCAGGATGTGTTTTCCCCTTTGATAGGTAAGGGAATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTCAGACGCCATATGCTTaGGGTCTGGTGGTTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HFPIPSLRVSNRKNTKAGQTPYA*GLVVVS Trigger: GCTCACAACCACCAGACCCAAAGCATATGGCGTCTG...ACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | GCTTGTCTCCCAATCACTTCCGTGGCACAAACAGTGTaGCTTGACATTCCTGCAGTGCATCCTCAGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: ACLPITSVAQTV*LDIPAVHPQST Trigger: TGTGCTCTGAGGATGCACTGCAGGAATGTCAAGTCACACTGTTTGTGCCACGGAAGTGATTGGGAGACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | GTCCTGCCACGGTGGAGTTCCAGCAAGCATACACTGTaGATTTACCTTCTGCTGCTTAGAAATCCACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLPRWSSSKHTL*IYLLLLRNPPA Trigger: AGCAGGTGGATTTCTAAGCAGCAGAAGGTAAATGCACAGTGTATGCTTGCTGGAACTCCACCGTGGCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | CCACAAACAAAAACAACAAAACCACAAACGGAGGCATaGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PQTKTTKPQTEA*LPLCCESQRCE Trigger: TTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CCA 72 bp | ACAGGACTCCTAAGGCTTGTCTCCCAATCACTTCCGTaGCACAAACAGTGTGACTTGACATTCCTGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGLLRLVSQSLP*HKQCDLTFLQC Trigger: GCACTGCAGGAATGTCAAGTCACACTGTTTGTGCCACGGAAGTGATTGGGAGACAAGCCTTAGGAGTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAAACAAAAACAACAAAACCACAAACGGAGGCATGGCTGCCGCTCTGCTGTGTTAGAGATGCTGGCTTaGGCCTTGCTCCTCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HKQKQQNHKRRHGCRSAVLEMLA*ALLLRR Trigger: TCTTCTGAGGAGCAAGGCCAAAGCCAGCATCTCTAA...CACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | CTGAGGGCGAAACCTGGCTGCGTTTTATTGGATGGGTaGTGGAGGGGTGGGCAAACTATAATAAAGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRAKPGCVLLDG*WRGGQTIIKEN Trigger: ATTCTCCTTTATTATAGTTTGCCCACCCCTCCATCACCCATCCAATAAAACGCAGCCAGGTTTCGCCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR TCA 72 bp | TGGGTTTTAGAACACCCTCGGAAGCATGAAGGTAGATaGAGTACAGAAGCCCTACTGGGGCAAGGCAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: WVLEHPRKHEGR*STEALLGQGRI Trigger: AATTCTGCCTTGCCCCAGTAGGGCTTCTGTACTTCATCTACCTTCATGCTTCCGAGGGTGTTCTAAAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | GTTCCAGCAAGCATACACTGTGCATTTACCTTCTGCTaGTTAGAAATCCACCTGCTACCTGAACAGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPASIHCAFTFC*LEIHLLPEQAV Trigger: CACAGCCTGTTCAGGTAGCAGGTGGATTTCTAAGCAGCAGAAGGTAAATGCACAGTGTATGCTTGCTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR GCA 72 bp | GGAGTTCCAGCAAGCATACACTGTGCATTTACCTTCTaGTGCTTAGAAATCCACCTGCTACCTGAACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVPASIHCAFTF*CLEIHLLPEQA Trigger: AGCCTGTTCAGGTAGCAGGTGGATTTCTAAGCAGCAGAAGGTAAATGCACAGTGTATGCTTGCTGGAACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGGAACAGCCGGGGCCCTaGCGCGCCTGTAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWEQPGP*RACRAL Trigger: CAAGGCTCTACAGGCGCGGCAGGGCCCCGGCTGTTC...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCCAGGTCAGCGGCCTCTCCTGCTGTCCCGCCCAGTGGCTGTGGTGCAAGACAGTGTCGGTTGAGTaGCACTGCCCAGAGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAQVSGLSCCPAQWLWCKTVSVE*HCPEPS Trigger: GGACGGCTCTGGGCAGTGCCACTCAACCGACACTGT...CTTGCACCACAGCCACTGGGCGGGACAGCAGGAGAGGCCGCTGACCTGGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGAGCTGGCCCTCACTGGGCAGCTaGAGCGGCTGGCTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFQDSQEPPDPQAQEQSWPSLGS*SGWLGS Trigger: GGAGCCCAGCCAGCCGCTGCAGCTGCCCAGTGAGGG...CCAGCTCTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACCCTCACTGGGCAGCTaGAGCGGCTGGCTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRPSLGS*SGWLGS Trigger: GGAGCCCAGCCAGCCGCTGCAGCTGCCCAGTGAGGG...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTCCCTCACTGGGCAGCTaGAGCGGCTGGCTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPSPKEEGDEPFPSVSPSLGS*SGWLGS Trigger: GGAGCCCAGCCAGCCGCTGCAGCTGCCCAGTGAGGG...AGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGAGCTCTGGCGACTGGTaGCCATGTGGTCGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWSSGDW*PCGRFW Trigger: CCAGAACCGACCACATGGCCACCAGTCGCCAGAGCT...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| 3UTR CAA 72 bp | CCCAGTCTGGCCTGGGAGGTGGGGCGGGTTCGGTCCTaGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLAWEVGRVRS*CGEVYLASFLS Trigger: GGACAGAAAGGATGCCAGGTAGACCTCACCGCACAAGGACCGAACCCGCCCCACCTCCCAGGCCAGACTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGGCTGGCTGGGCTCCTTaGGTTGGCACTGGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWAGWAP*VGTGDS Trigger: TGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGC...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCCCAGCCTGGGGCTGCTaGAGAGAGAGCTCGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSPAWGC*RESSCL Trigger: CAGGCACGAGCTCTCTCTTCAGCAGCCCCAGGCTGG...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGAAGGTCTCCACCGCCTaGCAGAACCACCTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWKVSTA*QNHLTM Trigger: CATCGTCAGGTGGTTCTGGCAGGCGGTGGAGACCTT...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGGCGCCTGTAGAGCCTTaGAGAGCCTTGAAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWAPVEP*RALKPW Trigger: CCAAGGCTTCAAGGCTCTGCAAGGCTCTACAGGCGC...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACGAACAGCCGGGGCCCTaGCGCGCCTGTAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGRRADAICFGSGGCEQDEQPGP*RACRAL Trigger: CAAGGCTCTACAGGCGCGGCAGGGCCCCGGCTGTTC...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCCAGGTCAGCGGCCTCTCCTGCTGTCCCGCCCAGTGGCTGTGGTGCAAGCAAACTGCAGGAGTCTaGCTCTCCTCTCCTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAQVSGLSCCPAQWLWCKQTAGV*LSSPHR Trigger: TCGATGAGGAGAGGAGAGCCAGACTCCTGCAGTTTG...CTTGCACCACAGCCACTGGGCGGGACAGCAGGAGAGGCCGCTGACCTGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGACACAGCCAGACCCATaGTGCGACCCACAAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWTQPDP*CDPQSG Trigger: TCCACTTTGTGGGTCGCATCATGGGTCTGGCTGTGT...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCGGCAGCTCTGGCGACTaGTGGCCATGTGGTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSGSSGD*WPCGRF Trigger: GAACCGACCACATGGCCACCAGTCGCCAGAGCTGCC...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGACCACGGAGCCCTCACTaGGCAGCTGCAGCGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: INGWEPPRKVPWPALSKGPRSPH*AAAAAG Trigger: GCCAGCCGCTGCAGCTGCCCAGTGAGGGCTCCGTGG...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGCTGTCAGACGGATCTTaGTGCTGGAGCCGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TCCHSTAAAWRVLSEALRLSDGS*CWSRSY Trigger: GTAGGAACGGCTCCAGCATCAAGATCCGTCTGACAG...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTGTACCAGGAGTCTCTaGTCTTGGCTTGGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWCTRSL*SWLGDS Trigger: GGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACA...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGAGCTGGACAGTGTCGGTTGAGTaGCACTGCCCAGAGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFQDSQEPPDPQAQEQSWTVSVE*HCPEPS Trigger: GGACGGCTCTGGGCAGTGCCACTCAACCGACACTGT...CCAGCTCTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGCCACGGAGCCCTCACTaGGCAGCTGCAGCGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRPRSPH*AAAAAG Trigger: GCCAGCCGCTGCAGCTGCCCAGTGAGGGCTCCGTGG...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGATCCAGGTCCGACAGCTaGATTGGCTTCCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRSRSDS*IGFPRS Trigger: GCTCCTGGGGAAGCCAATCCAGCTGTCGGACCTGGA...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGAGCAGGTATGGGCCTTaGGCAGGTTGTCTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPATREACRRHMLWVWWSRYGP*AGCLYW Trigger: CCAATACAGACAACCTGCCCAAGGCCCATACCTGCT...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGCCAGCCTGGGGCTGCTaGAGAGAGAGCTCGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLPAWGC*RESSCL Trigger: CAGGCACGAGCTCTCTCTTCAGCAGCCCCAGGCTGG...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGCCTGCCAGAACCACCTaGCGATGTTGCTGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVRSTWHPFCPQTWQPRAPARTT*RCCCLP Trigger: TGGCAGACAGCAACATCGTCAGGTGGTTCTGGCAGG...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGCACACCAAGCTCTTATaGAGTTCTGGGTCCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCCHSTAAAWRVLSEALRHTKLL*SSGSTD Trigger: GTCCGTGGACCCAGAACTGCATAAGAGCTTGGTGTG...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCAAGGTCTCCACCGCCTaGCAGAACCACCTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSKVSTA*QNHLTM Trigger: CATCGTCAGGTGGTTCTGGCAGGCGGTGGAGACCTT...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGAACAGCCGGGGCCCTaGCGCGCCTTGCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKEQPGP*RALQSL Trigger: AAGGCTCTGCAAGGCGCGGCAGGGCCCCGGCTGTTC...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100461.7 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTGGCAGCTCTGGCGACTaGTGGCCATGTGGTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGGVQTPYALGLVVVSKTGSSGD*WPCGRF Trigger: GAACCGACCACATGGCCACCAGTCGCCAGAGCTGCC...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTTCTGCAGTCCACCACTaGCCCTCCACCGCCTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPSPKEEGDEPFPSVSSAVHH*PSTAYS Trigger: AGAATAGGCGGTGGAGGGTCAGTGGTGGACTGCAGA...AGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTTCTGCAGTCCACCACTaGCCCTCCACCGCCTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTEAWLPLCCESQRCEACSAVHH*PSTAYS Trigger: AGAATAGGCGGTGGAGGGTCAGTGGTGGACTGCAGA...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTCGGCCTTCCAGGGCCTaGGTCTTCATACACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPSPKEEGDEPFPSVSRPSRA*VFIHCS Trigger: GGAACAGTGTATGAAGACTCAGGCCCTGGAAGGCCG...AGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAACCAGCCTGGGGCTGCTaGAGAGAGAGCTCGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKPAWGC*RESSCL Trigger: CAGGCACGAGCTCTCTCTTCAGCAGCCCCAGGCTGG...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGAAGCCTTGCAGAGCCTTaGAGCCTTGGAGAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRSLAEP*SLGEEL Trigger: GAGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGCT...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACCGCCTTGCAGAGCCTTaGAGCCTTGGAGAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRRADAICFGSGGCEQDRLAEP*SLGEEL Trigger: GAGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGCG...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100461.7 |
||
| CDS-3UTR GCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGATTCTTCCCGACACTGTaGTTCGGACTTCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRFFPTL*FGLPSL Trigger: CAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAA...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCCAGGTCAGCGGCCTCTCCTGCTGTCCCGCCCAGTGGCTGTGGTGCAAGTCTTTGCAAGGTTCTTaGCACACAATACTGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GAQVSGLSCCPAQWLWCKSLQGS*HTILSD Trigger: GTCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGA...CTTGCACCACAGCCACTGGGCGGGACAGCAGGAGAGGCCGCTGACCTGGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCTCCCTCTCATATCTCTaGGCAGGAAGCTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSSLSYL*AGSSSS Trigger: GGACGAGGAGCTTCCTGCCCAGAGATATGAGAGGGA...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGAGGCACTGGTGATTCATaGTGTGGTGAAGCCGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRGTGDS*CGEAVD Trigger: ATCCACGGCTTCACCACATCATGAATCACCAGTGCC...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGTCCACGCAGAAGGTATaGTCCAACACAGGCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AVRSTWHPFCPQTWQPRASTQKV*SNTGVM Trigger: CATCACGCCTGTGTTGGATCATACCTTCTGCGTGGA...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGTCTTGTTCTCCTCAGTaGCAGGCACATTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCCHSTAAAWRVLSEALRSCSPQ*QAHFCH Trigger: ATGGCAGAAATGTGCCTGTCACTGAGGAGAACAAGA...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTAGCCTTGCAGAGCCTTaGAGCCTTGGAGAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPSPKEEGDEPFPSVSSLAEP*SLGEEL Trigger: GAGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGCT...AGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTTTCTTCCCGACACTGTaGTTCGGACTTCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTEAWLPLCCESQRCEACFFPTL*FGLPSL Trigger: CAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAA...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGGCGCCTGTAGAGCCTTaGAGAGCCTTGAAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCGEVYLASFLSPDLATQAPVEP*RALKPW Trigger: CCAAGGCTTCAAGGCTCTGCAAGGCTCTACAGGCGC...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGACAGTGTCGGTTGAGTaGCACTGCCCAGAGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLTVSVE*HCPEPS Trigger: GGACGGCTCTGGGCAGTGCCACTCAACCGACACTGT...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGCCATGTGGTCGGTTCTaGGGTGTCTGTAAGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCGEVYLASFLSPDLATQPCGRF*GVCKGP Trigger: AGGGCCCTTACAGACACCCCAGAACCGACCACATGG...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGGATGTGGTGAAGCCGTaGATCTGTAAACTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCCHSTAAAWRVLSEALRDVVKP*ICKLGC Trigger: ACAACCCAGTTTACAGATCCACGGCTTCACCACATC...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTCCACGGAGCCCTCACTaGGCAGCTGCAGCGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFPIPSLRVSNRKNTKAGPRSPH*AAAAAG Trigger: GCCAGCCGCTGCAGCTGCCCAGTGAGGGCTCCGTGG...ACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCCAGGTCAGCGGCCTCTCCTGCTGTCCCGCCCAGTGGCTGTGGTGCAAGGTTGATAGAAGAATCTaGGTTGATCTGCAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GAQVSGLSCCPAQWLWCKVDRRI*VDLQCV Trigger: TACACACTGCAGATCAACCCAGATTCTTCTATCAAC...CTTGCACCACAGCCACTGGGCGGGACAGCAGGAGAGGCCGCTGACCTGGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGGTCCGACAGCTGGATTaGCTTCCCCAGGAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCGEVYLASFLSPDLATQVRQLD*LPQELL Trigger: AAGCAGCTCCTGGGGAAGCCAATCCAGCTGTCGGAC...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTGTCCGACAGCTGGATTaGCTTCCCCAGGAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGGVQTPYALGLVVVSKTVRQLD*LPQELL Trigger: AAGCAGCTCCTGGGGAAGCCAATCCAGCTGTCGGAC...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGTCCAGGTCCGACAGCTaGATTGGCTTCCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFQDSQEPPDPQAQEQSRSDS*IGFPRS Trigger: GCTCCTGGGGAAGCCAATCCAGCTGTCGGACCTGGA...CTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGCTCTTATGCAGTTCTaGGTCCACGGACTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPSPKEEGDEPFPSVSALMQF*VHGLQV Trigger: GACCTGGAGTCCGTGGACCCAGAACTGCATAAGAGC...AGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGGGTTTCAGTTCATGCTaGAGAATCCGCCCGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AVRSTWHPFCPQTWQPRAGFSSC*RIRPKA Trigger: CGCTTTCGGGCGGATTCTCCAGCATGAACTGAAACC...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGTTTCACAGTGTCGGTTaGGTGGCACTGCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVQTPYALGLVVVSKTLWFHSVG*VALPRA Trigger: GGCTCTGGGCAGTGCCACTCAACCGACACTGTGAAA...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCTTTCACAGTGTCGGTTaGGTGGCACTGCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLFHSVG*VALPRA Trigger: GGCTCTGGGCAGTGCCACTCAACCGACACTGTGAAA...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTCTGCAGTCCACCACTaGCCCTCCACCGCCTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLSAVHH*PSTAYS Trigger: AGAATAGGCGGTGGAGGGTCAGTGGTGGACTGCAGA...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCCGGCCTTCCAGGGCCTaGGTCTTCATACACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLRPSRA*VFIHCS Trigger: GGAACAGTGTATGAAGACTCAGGCCCTGGAAGGCCG...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTGTACCAGGAGTCTCTaGTCTTGGCTTGGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRRADAICFGSGGCEQDCTRSL*SWLGDS Trigger: GGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACA...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGGCTGGCTGGGCTCCTTaGGTTGGCACTGGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVQTPYALGLVVVSKTLWAGWAP*VGTGDS Trigger: TGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGC...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGCCTGCCAGAACCACCTaGCGATGTTGCTGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVQTPYALGLVVVSKTLWPARTT*RCCCLP Trigger: TGGCAGACAGCAACATCGTCAGGTGGTTCTGGCAGG...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGTTGGCGTCTATCAGGTaGATGGTGAACAGCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFQDSQEPPDPQAQEQLASIR*MVNSRG Trigger: GCCCCGGCTGTTCACCATTCACCTGATAGACGCCAA...CTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTCGGTTGAGTGGCACTaGCCAGAGCCGTCCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLSVEWH*PEPSTT Trigger: TGTTGTGGACGGCTCTGGGCAGTGCCACTCAACCGA...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGATCGGTTGAGTGGCACTaGCCAGAGCCGTCCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: INGWEPPRKVPWPALSKGSVEWH*PEPSTT Trigger: TGTTGTGGACGGCTCTGGGCAGTGCCACTCAACCGA...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGGTTCCCGCCTCCTGCTaGTGCACCAGTACCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLVPASC*CTSTIC Trigger: ACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAAC...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGAGTGCTGGTTCCACTTTaGGTCCAGGGTGTTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRVLVPL*VQGVFH Trigger: GTGAAAAACACCCTGGACCCAAAGTGGAACCAGCAC...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCCCATGTGGTCGGTTCTaGGGTGTCTGTAAGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLPCGRF*GVCKGP Trigger: AGGGCCCTTACAGACACCCCAGAACCGACCACATGG...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGAGCTCTGGCGACTGGTaGCCATGTGGTCGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQSSGDW*PCGRFW Trigger: CCAGAACCGACCACATGGCCACCAGTCGCCAGAGCT...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTAGCTCTGGCGACTGGTaGCCATGTGGTCGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSYVKGLHPDPSRATRSCSSGDW*PCGRFW Trigger: CCAGAACCGACCACATGGCCACCAGTCGCCAGAGCT...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGCCAGCCTGGAGGCAGTaGCCCAAGTTCATCGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLPAWRQ*PKFIAV Trigger: AACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGG...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCCAGGTCAGCGGCCTCTCCTGCTGTCCCGCCCAGTGGCTGTGGTGCAAGCAAATATCTCTTCTCTaGAGACTTCTATTCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAQVSGLSCCPAQWLWCKQISLL*RLLFDS Trigger: ACTGTCGAATAGAAGTCTCCAGAGAAGAGATATTTG...CTTGCACCACAGCCACTGGGCGGGACAGCAGGAGAGGCCGCTGACCTGGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTTCCAGGTCCGACAGCTaGATTGGCTTCCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSYVKGLHPDPSRATRSCSRSDS*IGFPRS Trigger: GCTCCTGGGGAAGCCAATCCAGCTGTCGGACCTGGA...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGGGCTTCAGCAAGTGTTaGGGAATGAGTTCGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TCCHSTAAAWRVLSEALRGFSKC*GMSSLN Trigger: GTTTAACGAACTCATTCCCCAACACTTGCTGAAGCC...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTTTTCACAGTGTCGGTTaGGTGGCACTGCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESFHSVG*VALPRA Trigger: GGCTCTGGGCAGTGCCACTCAACCGACACTGTGAAA...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGTGTGGTTCCACACACTaGTGGTTATCGAGTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVRSTWHPFCPQTWQPRACGSTH*WLSSPF Trigger: AAACGGACTCGATAACCATCAGTGTGTGGAACCACA...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGCGCTGTGAAGCCTGTGCAACCTGGACGTGGGGTTAGAGATGTGTTAGAGCGGCCTTCCAGGGCCTaGGTCTTCATACACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAVKPVQPGRGVRDVLERPSRA*VFIHCS Trigger: GGAACAGTGTATGAAGACTCAGGCCCTGGAAGGCCG...CTCTAACACATCTCTAACCCCACGTCCAGGTTGCACAGGCTTCACAGCGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAACACAGCCAGACCCATaGTGCGACCCACAAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: INGWEPPRKVPWPALSKGTQPDP*CDPQSG Trigger: TCCACTTTGTGGGTCGCATCATGGGTCTGGCTGTGT...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGACACAGCCAGACCCATaGTGCGACCCACAAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPFQDSQEPPDPQAQEQTQPDP*CDPQSG Trigger: TCCACTTTGTGGGTCGCATCATGGGTCTGGCTGTGT...CTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGAGCTGGTCGTTAAACCCCTTCTaGAGTGCTAAGAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFQDSQEPPDPQAQEQSWSLNPF*SAKNWA Trigger: AGCCCAGTTCTTAGCACTTCAGAAGGGGTTTAACGA...CCAGCTCTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGCCTGCCAGAACCACCTaGCGATGTTGCTGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRPARTT*RCCCLP Trigger: TGGCAGACAGCAACATCGTCAGGTGGTTCTGGCAGG...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGTTGGCGTCTATCAGGTaGATGGTGAACAGCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQLASIR*MVNSRG Trigger: GCCCCGGCTGTTCACCATTCACCTGATAGACGCCAA...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTTTGGCGTCTATCAGGTaGATGGTGAACAGCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESLASIR*MVNSRG Trigger: GCCCCGGCTGTTCACCATTCACCTGATAGACGCCAA...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTTCGGTTGAGTGGCACTaGCCAGAGCCGTCCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESSVEWH*PEPSTT Trigger: TGTTGTGGACGGCTCTGGGCAGTGCCACTCAACCGA...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTGTTCCCGCCTCCTGCTaGTGCACCAGTACCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSYVKGLHPDPSRATRSCVPASC*CTSTIC Trigger: ACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAAC...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGTTCCCGCCTCCTGCTaGTGCACCAGTACCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKVPASC*CTSTIC Trigger: ACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAAC...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGAAGGTCTCCACCGCCTaGCAGAACCACCTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRKVSTA*QNHLTM Trigger: CATCGTCAGGTGGTTCTGGCAGGCGGTGGAGACCTT...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGCGTCCACAACAATCTTaGCAAAGGGGTCGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLRPQQS*QRGRGV Trigger: GACTCCCCGACCCCTTTGCCAAGATTGTTGTGGACG...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGATCTCTGATCTTGGCTTaGAGACTCCACAAACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRSLILA*RLHKPA Trigger: TGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGA...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGCCATGTGGTCGGTTCTaGGGTGTCTGTAAGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQPCGRF*GVCKGP Trigger: AGGGCCCTTACAGACACCCCAGAACCGACCACATGG...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCGGCAGCTCTGGCGACTaGTGGCCATGTGGTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGGSSGD*WPCGRF Trigger: GAACCGACCACATGGCCACCAGTCGCCAGAGCTGCC...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCCAGCCTGGAGGCAGTaGCCCAAGTTCATCGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESPAWRQ*PKFIAV Trigger: AACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGG...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTCCAGCCTGGAGGCAGTaGCCCAAGTTCATCGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSYVKGLHPDPSRATRSCPAWRQ*PKFIAV Trigger: AACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGG...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGAGATGTGGTGAAGCCGTaGATCTGTAAACTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRDVVKP*ICKLGC Trigger: ACAACCCAGTTTACAGATCCACGGCTTCACCACATC...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGTCCCTCTCATATCTCTaGGCAGGAAGCTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVQTPYALGLVVVSKTLWSLSYL*AGSSSS Trigger: GGACGAGGAGCTTCCTGCCCAGAGATATGAGAGGGA...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGTCCCTCTCATATCTCTaGGCAGGAAGCTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFQDSQEPPDPQAQEQSLSYL*AGSSSS Trigger: GGACGAGGAGCTTCCTGCCCAGAGATATGAGAGGGA...CTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGGTCCGACAGCTGGATTaGCTTCCCCAGGAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRVRQLD*LPQELL Trigger: AAGCAGCTCCTGGGGAAGCCAATCCAGCTGTCGGAC...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGCTCTTATGCAGTTCTaGGTCCACGGACTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: INGWEPPRKVPWPALSKGALMQF*VHGLQV Trigger: GACCTGGAGTCCGTGGACCCAGAACTGCATAAGAGC...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTGGTTTCAGTTCATGCTaGAGAATCCGCCCGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGGVQTPYALGLVVVSKTGFSSC*RIRPKA Trigger: CGCTTTCGGGCGGATTCTCCAGCATGAACTGAAACC...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTGTTTCAGCCGGGTGTTaGACTTCCAGTCGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGGVQTPYALGLVVVSKTVSAGC*TSSRSG Trigger: ACCTGAACGACTGGAAGTCCAACACCCGGCTGAAAC...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGGTTTCAGCCGGGTGTTaGACTTCCAGTCGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCGEVYLASFLSPDLATQVSAGC*TSSRSG Trigger: ACCTGAACGACTGGAAGTCCAACACCCGGCTGAAAC...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGAGCTGGAGAGCCTTGAAGCCTTaGAGAGGAACTCTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFQDSQEPPDPQAQEQSWRALKP*RGTLVD Trigger: ATCCACAAGAGTTCCTCTCCAAGGCTTCAAGGCTCT...CCAGCTCTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACCTGGGCTCGGATGTATaGCCTTGTAGAAGGAATTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGRRADAICFGSGGCEQDLGSDV*PCRRNS Trigger: CGAATTCCTTCTACAAGGCCATACATCCGAGCCCAG...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGCTGTCAGACGGATCTTaGTGCTGGAGCCGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQLSDGS*CWSRSY Trigger: GTAGGAACGGCTCCAGCATCAAGATCCGTCTGACAG...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTCTGTCAGACGGATCTTaGTGCTGGAGCCGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSYVKGLHPDPSRATRSCLSDGS*CWSRSY Trigger: GTAGGAACGGCTCCAGCATCAAGATCCGTCTGACAG...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTAGGGGTCGGGGAGTCTaGAGAAGTCTTTCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGGVQTPYALGLVVVSKTRGRGV*RSLSLQ Trigger: TTGCAAAGAAAGACTTCTTCAGACTCCCCGACCCCT...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTGTGGTTCCACACACTaGTGGTTATCGAGTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGRRADAICFGSGGCEQDCGSTH*WLSSPF Trigger: AAACGGACTCGATAACCATCAGTGTGTGGAACCACA...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGTACCAGGAGTCTCTaGTCTTGGCTTGGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLCTRSL*SWLGDS Trigger: GGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACA...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGGGCACTGGTGATTCATaGTGTGGTGAAGCCGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLGTGDS*CGEAVD Trigger: ATCCACGGCTTCACCACATCATGAATCACCAGTGCC...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCTTGGCCGCATCTTCATaGTCTGGCGATACGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLLAASS*SGDTTP Trigger: AGGAGTCGTATCGCCAGATCATGAAGATGCGGCCAA...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGTTGGCCGCATCTTCATaGTCTGGCGATACGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVQTPYALGLVVVSKTLWLAASS*SGDTTP Trigger: AGGAGTCGTATCGCCAGATCATGAAGATGCGGCCAA...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTTCGTTAAACCCCTTCTaGAGTGCTAAGAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPSPKEEGDEPFPSVSSLNPF*SAKNWA Trigger: AGCCCAGTTCTTAGCACTTCAGAAGGGGTTTAACGA...AGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGAGGAAGCCAGCCCCCTaGTTCTTGTGGATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLRKPAP*FLWIFL Trigger: CAAGAAGATCCACAAGAAGCAGGGGGCTGGCTTCCT...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGTTCTTCCCGACACTGTaGTTCGGACTTCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRFFPTL*FGLPSL Trigger: CAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAA...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTTGGGTTTCAGTTCATaGTGGAGAATCCGCCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGRRADAICFGSGGCEQDLGFSS*WRIRPK Trigger: TTTCGGGCGGATTCTCCAGCATGAACTGAAACCCAA...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTAGTACCATCTGTATATaGGGCAGGTTCCTCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTEAWLPLCCESQRCEACSTICI*GRFLHE Trigger: CTCATGGAGGAACCTGCCCCATATACAGATGGTACT...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTTCTCTGATCTTGGCTTaGAGACTCCACAAACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLPSPKEEGDEPFPSVSSLILA*RLHKPA Trigger: TGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGA...AGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGAATGCGACCCACAAAGTaGAAGTATGACAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WEPPRKVPWPALSKGGGRMRPTK*KYDRWS Trigger: TGACCATCTGTCATACTTCCACTTTGTGGGTCGCAT...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGGCTCTTATGCAGTTCTaGGTCCACGGACTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRALMQF*VHGLQV Trigger: GACCTGGAGTCCGTGGACCCAGAACTGCATAAGAGC...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCCAAACTGCAGGAGTCTaGCTCTCCTCTCCTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLQTAGV*LSSPHR Trigger: TCGATGAGGAGAGGAGAGCCAGACTCCTGCAGTTTG...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTGGAGAGGAACTCTTGTaGATCCTGTCACAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTEAWLPLCCESQRCEACGEELL*ILSQTA Trigger: TGCAGTTTGTGACAGGATCCACAAGAGTTCCTCTCC...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACGCAGGTTGTCTGTATTaGCGTCTATCAGGTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRRADAICFGSGGCEQDAGCLY*RLSGEW Trigger: CCATTCACCTGATAGACGCCAATACAGACAACCTGC...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| 3UTR CAA 72 bp | AACTTGAGCTCAGTAAGCTGTCGGCAGCTGCTGAACTaGAAAGGGGGCTTTGAGGCTCCAGTCAAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLSSVSCRQLLN*KGGFEAPVKGS Trigger: GCTCCCCTTGACTGGAGCCTCAAAGCCCCCTTTCAAGTTCAGCAGCTGCCGACAGCTTACTGAGCTCAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGTTGGCCGCATCTTCATaGTCTGGCGATACGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRLAASS*SGDTTP Trigger: AGGAGTCGTATCGCCAGATCATGAAGATGCGGCCAA...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGTCCACGCAGAAGGTATaGTCCAACACAGGCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQSTQKV*SNTGVM Trigger: CATCACGCCTGTGTTGGATCATACCTTCTGCGTGGA...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCACACCAAGCTCTTATaGAGTTCTGGGTCCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESHTKLL*SSGSTD Trigger: GTCCGTGGACCCAGAACTGCATAAGAGCTTGGTGTG...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGAGCTGGTCTTTGCAAGGTTCTTaGCACACAATACTGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PFQDSQEPPDPQAQEQSWSLQGS*HTILSD Trigger: GTCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGA...CCAGCTCTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCATATAAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGCGTCCACAACAATCTTaGCAAAGGGGTCGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYKSPFQDSQEPPDPQAQRPQQS*QRGRGV Trigger: GACTCCCCGACCCCTTTGCCAAGATTGTTGTGGACG...CTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTTATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGTGCTGGTTCCACTTTaGGTCCAGGGTGTTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: INGWEPPRKVPWPALSKGVLVPL*VQGVFH Trigger: GTGAAAAACACCCTGGACCCAAAGTGGAACCAGCAC...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGTTTCAGCCGGGTGTTaGACTTCCAGTCGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKVSAGC*TSSRSG Trigger: ACCTGAACGACTGGAAGTCCAACACCCGGCTGAAAC...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAAACTGCAGGAGTCTaGCTCTCCTCTCCTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESQTAGV*LSSPHR Trigger: TCGATGAGGAGAGGAGAGCCAGACTCCTGCAGTTTG...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTGCAGGTTGTCTGTATTaGCGTCTATCAGGTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGVQTPYALGLVVVSKTAGCLY*RLSGEW Trigger: CCATTCACCTGATAGACGCCAATACAGACAACCTGC...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGAGCAGGTATGGGCCTTaGGCAGGTTGTCTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRSRYGP*AGCLYW Trigger: CCAATACAGACAACCTGCCCAAGGCCCATACCTGCT...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGCGCTGTGAAGCCTGTGCAACCTGGACGTGGGGTTAGAGATGTGTTAGAGAGGGGTCGGGGAGTCTaGAGAAGTCTTTCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSAVKPVQPGRGVRDVLERGRGV*RSLSLQ Trigger: TTGCAAAGAAAGACTTCTTCAGACTCCCCGACCCCT...CTCTAACACATCTCTAACCCCACGTCCAGGTTGCACAGGCTTCACAGCGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGTGTGGTTCCACACACTaGTGGTTATCGAGTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVQTPYALGLVVVSKTLWCGSTH*WLSSPF Trigger: AAACGGACTCGATAACCATCAGTGTGTGGAACCACA...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTTGTCTTTCAATCTGCTaGTGGCATTGGAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSYVKGLHPDPSRATRSCCLSIC*WHWRAA Trigger: GGCTGCTCTCCAATGCCATCAGCAGATTGAAAGACA...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTTGTCTTTCAATCTGCTaGTGGCATTGGAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESCLSIC*WHWRAA Trigger: GGCTGCTCTCCAATGCCATCAGCAGATTGAAAGACA...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGCTGGCTGGGCTCCTTaGGTTGGCACTGGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFPIPSLRVSNRKNTKAGAGWAP*VGTGDS Trigger: TGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGC...ACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CCATATAAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGTCCACGCAGAAGGTATaGTCCAACACAGGCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PYKSPFQDSQEPPDPQAQSTQKV*SNTGVM Trigger: CATCACGCCTGTGTTGGATCATACCTTCTGCGTGGA...CTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTTATATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCTCTTGTTCTCCTCAGTaGCAGGCACATTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLSCSPQ*QAHFCH Trigger: ATGGCAGAAATGTGCCTGTCACTGAGGAGAACAAGA...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTTGGGTTTCAGTTCATaGTGGAGAATCCGCCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLLGFSS*WRIRPK Trigger: TTTCGGGCGGATTCTCCAGCATGAACTGAAACCCAA...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGTGCTGGTTCCACTTTaGGTCCAGGGTGTTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQVLVPL*VQGVFH Trigger: GTGAAAAACACCCTGGACCCAAAGTGGAACCAGCAC...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCGCATCTTCATGATCTaGCGATACGACTCCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGGVQTPYALGLVVVSKTRIFMI*RYDSSN Trigger: ATTTGAGGAGTCGTATCGCCAGATCATGAAGATGCG...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGGGCTTCAGCAAGTGTTaGGGAATGAGTTCGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCGEVYLASFLSPDLATQGFSKC*GMSSLN Trigger: GTTTAACGAACTCATTCCCCAACACTTGCTGAAGCC...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCGGAGAGGAACTCTTGTaGATCCTGTCACAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLGEELL*ILSQTA Trigger: TGCAGTTTGTGACAGGATCCACAAGAGTTCCTCTCC...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTTCTTGTTCTCCTCAGTaGCAGGCACATTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESSCSPQ*QAHFCH Trigger: ATGGCAGAAATGTGCCTGTCACTGAGGAGAACAAGA...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGCTGAGGGATTTAGTTTaGATAGATCCAAACGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCGEVYLASFLSPDLATQLRDLV*IDPNAG Trigger: ACCAGCGTTTGGATCTATGCAAACTAAATCCCTCAG...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCCACACCAAGCTCTTATaGAGTTCTGGGTCCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGHTKLL*SSGSTD Trigger: GTCCGTGGACCCAGAACTGCATAAGAGCTTGGTGTG...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTTTGGGTTTCAGTTCATaGTGGAGAATCCGCCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESLGFSS*WRIRPK Trigger: TTTCGGGCGGATTCTCCAGCATGAACTGAAACCCAA...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAAGTACCATCTGTATATaGGGCAGGTTCCTCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKSTICI*GRFLHE Trigger: CTCATGGAGGAACCTGCCCCATATACAGATGGTACT...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAATCTCTGATCTTGGCTTaGAGACTCCACAAACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKSLILA*RLHKPA Trigger: TGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGA...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTAGAACTTTGAGCTTCTaGACTAAGTCCCTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QTEAWLPLCCESQRCEACRTLSF*TKSLSY Trigger: ATATGAGAGGGACTTAGTCCAGAAGCTCAAAGTTCT...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGGGCTTCAGCAAGTGTTaGGGAATGAGTTCGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLGFSKC*GMSSLN Trigger: GTTTAACGAACTCATTCCCCAACACTTGCTGAAGCC...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGAGCTCTAGTTCCTTCTaGTCAAAGGGCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQSSSSF*SKGFSK Trigger: CTTGCTGAAGCCCTTTGACCAGAAGGAACTAGAGCT...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGGGAGAGGAACTCTTGTaGATCCTGTCACAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRGEELL*ILSQTA Trigger: TGCAGTTTGTGACAGGATCCACAAGAGTTCCTCTCC...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGAGAGCCTTGAAGCCTTaGAGAGGAACTCTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRRALKP*RGTLVD Trigger: ATCCACAAGAGTTCCTCTCCAAGGCTTCAAGGCTCT...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACAAGGAAGCAAGCAAGCTGAGGAGAACTGTTAGCATCACGTTGCCACTGGGCACTGGTGATTCATaGTGTGGTGAAGCCGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EDKEASKLRRTVSITLPLGTGDS*CGEAVD Trigger: ATCCACGGCTTCACCACATCATGAATCACCAGTGCC...CAGTGGCAACGTGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACAAGGAAGCAAGCAAGCTGAGGAGAACTGTTAGCATCACGTTGCCACTGAGGAAGCCAGCCCCCTaGTTCTTGTGGATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EDKEASKLRRTVSITLPLRKPAP*FLWIFL Trigger: CAAGAAGATCCACAAGAAGCAGGGGGCTGGCTTCCT...CAGTGGCAACGTGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGTCTTTGCAAGGTTCTTaGCACACAATACTGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVQTPYALGLVVVSKTLWSLQGS*HTILSD Trigger: GTCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGA...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAAAACTGACCACTATTTaGCCACGAACTGCATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: INGWEPPRKVPWPALSKGKLTTI*PRTASV Trigger: TACTGATGCAGTTCGTGGCCAAATAGTGGTCAGTTT...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAAACTGACCACTATTTaGCCACGAACTGCATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLKLTTI*PRTASV Trigger: TACTGATGCAGTTCGTGGCCAAATAGTGGTCAGTTT...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGCGCATCTTCATGATCTaGCGATACGACTCCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQRIFMI*RYDSSN Trigger: ATTTGAGGAGTCGTATCGCCAGATCATGAAGATGCG...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAATGCGACCCACAAAGTaGAAGTATGACAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKMRPTK*KYDRWS Trigger: TGACCATCTGTCATACTTCCACTTTGTGGGTCGCAT...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGCGCTGTGAAGCCTGTGCAACCTGGACGTGGGGTTAGAGATGTGTTAGAGATGCGACCCACAAAGTaGAAGTATGACAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSAVKPVQPGRGVRDVLEMRPTK*KYDRWS Trigger: TGACCATCTGTCATACTTCCACTTTGTGGGTCGCAT...CTCTAACACATCTCTAACCCCACGTCCAGGTTGCACAGGCTTCACAGCGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACAAGGAAGCAAGCAAGCTGAGGAGAACTGTTAGCATCACGTTGCCACTGGGTTTCAGTTCATGCTaGAGAATCCGCCCGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EDKEASKLRRTVSITLPLGFSSC*RIRPKA Trigger: CGCTTTCGGGCGGATTCTCCAGCATGAACTGAAACC...CAGTGGCAACGTGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| 3UTR CAA 72 bp | GGGGTTAGAGATGTGTTAGAGATGCTGGCTTTGGCCTaGCTCCTCAGAAGACAAGGAAGCAAGCAAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVRDVLEMLALA*LLRRQGSKQAE Trigger: CTCAGCTTGCTTGCTTCCTTGTCTTCTGAGGAGCAAGGCCAAAGCCAGCATCTCTAACACATCTCTAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | CACAAACAAAAACAACAAAACCACAAACGGAGGCATGGCTGCCGCTCTGCTGTGTGTCTTTCAATCTGCTaGTGGCATTGGAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HKQKQQNHKRRHGCRSAVCLSIC*WHWRAA Trigger: GGCTGCTCTCCAATGCCATCAGCAGATTGAAAGACA...CACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCTCGTTAAACCCCTTCTaGAGTGCTAAGAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGSLNPF*SAKNWA Trigger: AGCCCAGTTCTTAGCACTTCAGAAGGGGTTTAACGA...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCTGAGGGATTTAGTTTaGATAGATCCAAACGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRRRETSLFPRFLESLRDLV*IDPNAG Trigger: ACCAGCGTTTGGATCTATGCAAACTAAATCCCTCAG...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGCTGAGGGATTTAGTTTaGATAGATCCAAACGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRRRETSLFPRFLESQLRDLV*IDPNAG Trigger: ACCAGCGTTTGGATCTATGCAAACTAAATCCCTCAG...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCAGTACCATCTGTATATaGGGCAGGTTCCTCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGSTICI*GRFLHE Trigger: CTCATGGAGGAACCTGCCCCATATACAGATGGTACT...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCGATGTGGTGAAGCCGTaGATCTGTAAACTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGDVVKP*ICKLGC Trigger: ACAACCCAGTTTACAGATCCACGGCTTCACCACATC...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGAGAACTTTGAGCTTCTaGACTAAGTCCCTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLRTLSF*TKSLSY Trigger: ATATGAGAGGGACTTAGTCCAGAAGCTCAAAGTTCT...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCATATAAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGCGCATCTTCATGATCTaGCGATACGACTCCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PYKSPFQDSQEPPDPQAQRIFMI*RYDSSN Trigger: ATTTGAGGAGTCGTATCGCCAGATCATGAAGATGCG...CTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTTATATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CCATATAAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGAAACTGACCACTATTTaGCCACGAACTGCATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PYKSPFQDSQEPPDPQAQKLTTI*PRTASV Trigger: TACTGATGCAGTTCGTGGCCAAATAGTGGTCAGTTT...CTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTTATATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGACAAATATCTCTTCTCTaGAGACTTCTATTCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: INGWEPPRKVPWPALSKGQISLL*RLLFDS Trigger: ACTGTCGAATAGAAGTCTCCAGAGAAGAGATATTTG...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGCAAATATCTCTTCTCTaGAGACTTCTATTCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGVQTPYALGLVVVSKTLQISLL*RLLFDS Trigger: ACTGTCGAATAGAAGTCTCCAGAGAAGAGATATTTG...CAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGTTGATAGAAGAATCTaGGTTGATCTGCAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RINGWEPPRKVPWPALSKVDRRI*VDLQCV Trigger: TACACACTGCAGATCAACCCAGATTCTTCTATCAAC...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CACAAACAAAAACAACAAAACCACAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGCTCTAGTTCCTTCTaGTCAAAGGGCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HKQKQQNHKRRHGCRSAVSSSSF*SKGFSK Trigger: CTTGCTGAAGCCCTTTGACCAGAAGGAACTAGAGCT...CACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTAGAGCCTTGAAGCCTTaGAGAGGAACTCTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFPIPSLRVSNRKNTKAGRALKP*RGTLVD Trigger: ATCCACAAGAGTTCCTCTCCAAGGCTTCAAGGCTCT...ACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACAAGGAAGCAAGCAAGCTGAGGAGAACTGTTAGCATCACGTTGCCACTGAGAACTTTGAGCTTCTaGACTAAGTCCCTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EDKEASKLRRTVSITLPLRTLSF*TKSLSY Trigger: ATATGAGAGGGACTTAGTCCAGAAGCTCAAAGTTCT...CAGTGGCAACGTGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGTTGATAGAAGAATCTaGGTTGATCTGCAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HFPIPSLRVSNRKNTKAGVDRRI*VDLQCV Trigger: TACACACTGCAGATCAACCCAGATTCTTCTATCAAC...ACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS CCA 90 bp | CCTGCAGTTCCCGCCTCCTGCTGCTGCACCAGTACCATCTGTATATaGGGCAGGTTCCTCCATGAGGCAGCTGAGCGGCCTTCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAVPASCCCTSTICI*GRFLHEAAERPSRA Trigger: GGCCCTGGAAGGCCGCTCAGCTGCCTCATGGAGGAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGGCTGGGCTCCTTGAGTaGGCACTGGTGATTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: PQPATREACRRHMLWVWWAGLLE*ALVIHD Trigger: ATCATGAATCACCAGTGCCAACTCAAGGAGCCCAGC...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTGGCCTGGGAGGTGGGGCGGGTTCGGTCCTTGTGCGGTGAGGTCTACCTGGAGCCTTGCAGAGCCTaGAAGCCTTGGAGAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SLAWEVGRVRSLCGEVYLEPCRA*KPWRGT Trigger: AGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGCTC...CAGGTAGACCTCACCGCACAAGGACCGAACCCGCCCCACCTCCCAGGCCAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGGGGCCCTGCCGCGCCTaGCAGAGCCTTGAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVQTPYALGLVVVSKTLWGPCRA*QSLEAL Trigger: CAAGGCTTCAAGGCTCTGCAAGGCGCGGCAGGGCCC...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100461.7 |
||
| CDS TCA 90 bp | CAGGTATGGGCCTTGGGCAGGTTGTCTGTATTGGCGTCTATCAGGTaGATGGTGAACAGCCGGGGCCCTGCCGCGCCTGTAGAGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QVWALGRLSVLASIR*MVNSRGPAAPVEPC Trigger: GCAAGGCTCTACAGGCGCGGCAGGGCCCCGGCTGTTCACCATTCACCTGATAGACGCCAATACAGACAACCTGCCCAAGGCCCATACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS TCA 90 bp | CAGGTATGGGCCTTGGGCAGGTTGTCTGTATTGGCGTCTATCAGGTaGATGGTGAACAGCCGGGGCCCTGCCGCGCCTTGCAGAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVWALGRLSVLASIR*MVNSRGPAAPCRAL Trigger: CAAGGCTCTGCAAGGCGCGGCAGGGCCCCGGCTGTTCACCATTCACCTGATAGACGCCAATACAGACAACCTGCCCAAGGCCCATACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100461.7 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCAGGTCAGCGGCCTCTCCTGCTGTCCCGCCCAGTGGCTGTGGTGCAAGTTCTTGTGGATCTTCTaGTGGTTCCACACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GAQVSGLSCCPAQWLWCKFLWIF*WFHTLM Trigger: CATCAGTGTGTGGAACCACAAGAAGATCCACAAGAA...CTTGCACCACAGCCACTGGGCGGGACAGCAGGAGAGGCCGCTGACCTGGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| CDS-3UTR CAA 90 bp | GAACTGGCAATGAGGGGACCCACAGGCGACGCAGGCACAACGGCTGGTAGAAGCATCCGCCCGAAAGCGTaGTGCTCCACGCAGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELAMRGPTGDAGTTAGRSIRPKA*CSTQKV Trigger: TACCTTCTGCGTGGAGCACAACGCTTTCGGGCGGAT...GCTTCTACCAGCCGTTGTGCCTGCGTCGCCTGTGGGTCCCCTCATTGCCAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGCGGACGTATTCCTTCTaGTTCTCCTCAGTGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCCHSTAAAWRVLSEALRRTYSF*FSSVTG Trigger: GCCTGTCACTGAGGAGAACAAGAAGGAATACGTCCG...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS TCA 90 bp | TGGGGCAGGTTCCTCCATGAGGCAGCTGAGCGGCCTTCCAGGGCCTaGGTCTTCATACACTGTTCCTTCGTTCTCCAGCAGCCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WGRFLHEAAERPSRA*VFIHCSFVLQQPSA Trigger: TGCAGAGGGCTGCTGGAGAACGAAGGAACAGTGTATGAAGACTCAGGCCCTGGAAGGCCGCTCAGCTGCCTCATGGAGGAACCTGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGACTGTCAGACGGATCTaGATGCTGGAGCCGTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: AVRSTWHPFCPQTWQPRATVRRI*MLEPFL Trigger: TAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGT...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGGAGCAGAGCTGGCTGCACTGTTGTCCTTaGCTCATAGCCTTCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFQDSQEPPDPQAQEQSWLHCCP*LIAFRQ Trigger: CTGCCTGAAGGCTATGAGCAAAGGACAACAGTGCAG...CCAGCTCTGCTCCTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGCTGCCACAGCACTGCTGCAGCCTGGCGCGTCCTCTCTGAAGCACTGCGGCTTGGAGAGGAACTCTaGTGGATCCTGTCACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: TCCHSTAAAWRVLSEALRLGEEL*WILSQT Trigger: AGTTTGTGACAGGATCCACAAGAGTTCCTCTCCAAG...CCGCAGTGCTTCAGAGAGGACGCGCCAGGCTGCAGCAGTGCTGTGGCAGCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACGAGCCTTGCAGAGCCTaGAAGCCTTGGAGAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: RGRRADAICFGSGGCEQDEPCRA*KPWRGT Trigger: AGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGCTC...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS TCA 90 bp | GGCCCTCGAACCTCAGGATTTCGGAGTCGCTGTACCAGGAGTCTCTaGTCTTGGCTTGGAGACTCCACAAACCTGCAGTTCCCGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPRTSGFRSRCTRSL*SWLGDSTNLQFPPP Trigger: AGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGAAATCCTGAGGTTCGAGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS CCA 90 bp | CTCAGGATTTCGGAGTCGCTGTACCAGGAGTCTCTGATCTTGGCTTaGAGACTCCACAAACCTGCAGTTCCCGCCTCCTGCTGCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LRISESLYQESLILA*RLHKPAVPASCCCT Trigger: GGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGAAATCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS CCA 90 bp | TGCCTGAGAACTTTGAGCTTCTGGACTAAGTCCCTCTCATATCTCTaGGCAGGAAGCTCCTCGTCCTCCACGGAGCCCTCACTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLRTLSFWTKSLSYL*AGSSSSSTEPSLGS Trigger: GCTGCCCAGTGAGGGCTCCGTGGAGGACGAGGAGCTTCCTGCCCAGAGATATGAGAGGGACTTAGTCCAGAAGCTCAAAGTTCTCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCCCGCCACGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTCTTTGCAAGGTTCTaGGCACACAATACTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PQPATREACRRHMLWVWWFFARF*AHNTVR Trigger: TCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGAA...CCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTTTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGGVQTPYALGLVVVSKTFSQCR*SGTAQS Trigger: GCTCTGGGCAGTGCCACTCAACCGACACTGTGAAAA...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TCCACTCCCCATCACCTCAGCCCTGCTTCCAGACCACACTGGACAGAAGCAGCATTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: STPHHLSPASRPHWTEAAFSQCR*SGTAQS Trigger: GCTCTGGGCAGTGCCACTCAACCGACACTGTGAAAA...TGCTGCTTCTGTCCAGTGTGGTCTGGAAGCAGGGCTGAGGTGATGGGGAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGAGTGCTGGTTCCACTTaGGGTCCAGGGTGTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVRSTWHPFCPQTWQPRASAGST*GPGCFS Trigger: TGAAAAACACCCTGGACCCAAAGTGGAACCAGCACT...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTAATCTGCTGATGGCATaGGAGAGCAGCCGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: AGGVQTPYALGLVVVSKTNLLMA*ESSRTQ Trigger: CTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATT...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACGCTGGGCTCCTTGAGTaGGCACTGGTGATTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGRRADAICFGSGGCEQDAGLLE*ALVIHD Trigger: ATCATGAATCACCAGTGCCAACTCAAGGAGCCCAGC...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGTCGTGCCTGAGAACTTaGAGCTTCTGGACTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVRSTWHPFCPQTWQPRASCLRT*SFWTKS Trigger: GGACTTAGTCCAGAAGCTCAAAGTTCTCAGGCACGA...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGATCCGCCCGAAAGCGTaGTGCTCCACGCAGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GVQTPYALGLVVVSKTLWIRPKA*CSTQKV Trigger: TACCTTCTGCGTGGAGCACAACGCTTTCGGGCGGAT...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGAGCGGGCACATTTCTGCCATaGGGTTTCAGTTCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVRSTWHPFCPQTWQPRAGTFLP*GFSSCW Trigger: CCAGCATGAACTGAAACCCAATGGCAGAAATGTGCC...CGCTCTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS GCA 90 bp | TTGGCTTGGAGACTCCACAAACCTGCAGTTCCCGCCTCCTGCTGCTaGACCAGTACCATCTGTATATGGGGCAGGTTCCTCCATGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAWRLHKPAVPASCC*TSTICIWGRFLHEA Trigger: TGCCTCATGGAGGAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS CCA 90 bp | GATTCTTCCCGACACTGTGCTTCGGACTTCCCAGCCTGGAGGCAGTaGCCCAAGTTCATCGCAGTTCACACTGTTAAGGTCTCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSRHCASDFPAWRQ*PKFIAVHTVKVSGL Trigger: GAGCCCAGAGACCTTAACAGTGTGAACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTACTGTCAGACGGATCTaGATGCTGGAGCCGTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGGVQTPYALGLVVVSKTTVRRI*MLEPFL Trigger: TAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGT...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGATTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: INGWEPPRKVPWPALSKGFSQCR*SGTAQS Trigger: GCTCTGGGCAGTGCCACTCAACCGACACTGTGAAAA...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAATCTGCTGATGGCATaGGAGAGCAGCCGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLNLLMA*ESSRTQ Trigger: CTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATT...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGCACTGTTGTCCTTaGCTCATAGCCTTCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGGVQTPYALGLVVVSKTLHCCP*LIAFRQ Trigger: CTGCCTGAAGGCTATGAGCAAAGGACAACAGTGCAG...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAATCCGCCCGAAAGCGTaGTGCTCCACGCAGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RINGWEPPRKVPWPALSKIRPKA*CSTQKV Trigger: TACCTTCTGCGTGGAGCACAACGCTTTCGGGCGGAT...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CAAACGGAGGCATGGCTGCCGCTCTGCTGTGAGAGTCAGCGCTGTGAAGCCTGTGGCACATTTCTGCCATaGGGTTTCAGTTCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QTEAWLPLCCESQRCEACGTFLP*GFSSCW Trigger: CCAGCATGAACTGAAACCCAATGGCAGAAATGTGCC...ACAGGCTTCACAGCGCTGACTCTCACAGCAGAGCGGCAGCCATGCCTCCGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTAACCACCTGACGATGTaGCTGTCTGCCACACAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGGVQTPYALGLVVVSKTNHLTM*LSATQC Trigger: ACACTGTGTGGCAGACAGCAACATCGTCAGGTGGTT...AGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAGGAGGGAGACTTGGAGAGGAACTCTaGTGGATCCTGTCACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: WEPPRKVPWPALSKGGGRLGEEL*WILSQT Trigger: AGTTTGTGACAGGATCCACAAGAGTTCCTCTCCAAG...TCTCCCTCCTCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCTGGGCCTTGGGCAGGTaGTCTGTATTGGCGTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: ALSKGGGRRAFSLGFWNLWALGR*SVLASI Trigger: GATAGACGCCAATACAGACAACCTGCCCAAGGCCCA...GAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGGCGCCTTGCAGAGCCTaGAAGCCTTGGAGAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRAPCRA*KPWRGT Trigger: AGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGCGC...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100461.7 |
||
| CDS GCA 90 bp | ATCTTGGCTTGGAGACTCCACAAACCTGCAGTTCCCGCCTCCTGCTaGTGCACCAGTACCATCTGTATATGGGGCAGGTTCCTCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILAWRLHKPAVPASC*CTSTICIWGRFLHE Trigger: CTCATGGAGGAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS GCA 90 bp | CTGATCTTGGCTTGGAGACTCCACAAACCTGCAGTTCCCGCCTCCTaGTGCTGCACCAGTACCATCTGTATATGGGGCAGGTTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LILAWRLHKPAVPAS*CCTSTICIWGRFLH Trigger: ATGGAGGAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS CCA 90 bp | GATTCTTCCCGACACTGTGCTTCGGACTTCCCAGCCTGGAGGCAGTaGCCCAAGTTCATCGCAGTTCACACTGTTAAGGTCTCTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DSSRHCASDFPAWRQ*PKFIAVHTVKVSGD Trigger: ATCCCCAGAGACCTTAACAGTGTGAACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 |
||
| CDS-3UTR CAA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGACGGACGTATTCCTTCTaGTTCTCCTCAGTGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: INGWEPPRKVPWPALSKGRTYSF*FSSVTG Trigger: GCCTGTCACTGAGGAGAACAAGAAGGAATACGTCCG...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTTGTTTCAGCCGGGTGTaGGACTTCCAGTCGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPLQRRRETSLFPRFLESCFSRV*DFQSFR Trigger: CCTGAACGACTGGAAGTCCAACACCCGGCTGAAACA...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAAACCACCTGACGATGTaGCTGTCTGCCACACAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: INGWEPPRKVPWPALSKGNHLTM*LSATQC Trigger: ACACTGTGTGGCAGACAGCAACATCGTCAGGTGGTT...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS GCA 90 bp | GCTGTACCAGGAGTCTCTGATCTTGGCTTGGAGACTCCACAAACCTaGAGTTCCCGCCTCCTGCTGCTGCACCAGTACCATCTGTATATG | + |
|
Preference number: 5 (lower is better) Translates to: AVPGVSDLGLETPQT*SSRLLLLHQYHLYM Trigger: CATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGACTGTCAGACGGATCTaGATGCTGGAGCCGTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PLQRRRETSLFPRFLESQTVRRI*MLEPFL Trigger: TAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGT...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | ATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGGAAGTGCTGGTTCCACTTaGGGTCCAGGGTGTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: INGWEPPRKVPWPALSKGSAGST*GPGCFS Trigger: TGAAAAACACCCTGGACCCAAAGTGGAACCAGCACT...TCCTTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CGCGGGAGGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGAGGGATTTAGTTaGCATAGATCCAAACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGRRADAICFGSGGCEQDSEGFS*HRSKRW Trigger: CCAGCGTTTGGATCTATGCAAACTAAATCCCTCAGA...GTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCCTCCCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGCTGCACTGTTGTCCTTaGCTCATAGCCTTCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLQRRRETSLFPRFLESQLHCCP*LIAFRQ Trigger: CTGCCTGAAGGCTATGAGCAAAGGACAACAGTGCAG...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CCATATAAAAGTCCATTTCAAGACAGCCAGGAGCCTCCGGATCCCCAGGCACAGTGTTTCAGCCGGGTGTaGGACTTCCAGTCGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PYKSPFQDSQEPPDPQAQCFSRV*DFQSFR Trigger: CCTGAACGACTGGAAGTCCAACACCCGGCTGAAACA...CTGTGCCTGGGGATCCGGAGGCTCCTGGCTGTCTTGAAATGGACTTTTATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTTACGTGAAAGGGCTTCACCCAGACCCAAGCAGGGCAACCAGGAGCTGTAACCACCTGACGATGTaGCTGTCTGCCACACAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSYVKGLHPDPSRATRSCNHLTM*LSATQC Trigger: ACACTGTGTGGCAGACAGCAACATCGTCAGGTGGTT...ACAGCTCCTGGTTGCCCTGCTTGGGTCTGGGTGAAGCCCTTTCACGTAAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS GCA 90 bp | AACACAGGCGTGATGTCATTCTCTAGAATCCACACCAAGCTCTTATaGAGTTCTGGGTCCACGGACTCCAGGTCCGACAGCTGGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NTGVMSFSRIHTKLL*SSGSTDSRSDSWIG Trigger: GCCAATCCAGCTGTCGGACCTGGAGTCCGTGGACCCAGAACTGCATAAGAGCTTGGTGTGGATTCTAGAGAATGACATCACGCCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCAATCTGCTGATGGCATaGGAGAGCAGCCGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGNLLMA*ESSRTQ Trigger: CTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATT...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGTCTGAGGGATTTAGTTaGCATAGATCCAAACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCGEVYLASFLSPDLATQSEGFS*HRSKRW Trigger: CCAGCGTTTGGATCTATGCAAACTAAATCCCTCAGA...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGCGGTGAGGTCTACCTGGCATCCTTTCTGTCCCCAGACCTGGCAACCCAGGTGCAAAAAGTAAACTaGTCCCTGCACTGTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCGEVYLASFLSPDLATQVQKVN*SLHCCP Trigger: AGGACAACAGTGCAGGGACAAGTTTACTTTTTGCAC...CTGGGTTGCCAGGTCTGGGGACAGAAAGGATGCCAGGTAGACCTCACCGCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAATCGTGCCTGAGAACTTaGAGCTTCTGGACTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RINGWEPPRKVPWPALSKSCLRT*SFWTKS Trigger: GGACTTAGTCCAGAAGCTCAAAGTTCTCAGGCACGA...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGGGGCACATTTCTGCCATaGGGTTTCAGTTCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSKGGGRRAFSLGFWNLRGTFLP*GFSSCW Trigger: CCAGCATGAACTGAAACCCAATGGCAGAAATGTGCC...CCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS TCA 90 bp | TGCTGGAGAATCCGCCCGAAAGCGTTGTGCTCCACGCAGAAGGTATaGTCCAACACAGGCGTGATGTCATTCTCTAGAATCCACACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CWRIRPKALCSTQKV*SNTGVMSFSRIHTK Trigger: CTTGGTGTGGATTCTAGAGAATGACATCACGCCTGTGTTGGATCATACCTTCTGCGTGGAGCACAACGCTTTCGGGCGGATTCTCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS GCA 90 bp | TTCTCCTCAGTGACAGGCACATTTCTGCCATTGGGTTTCAGTTCATaGTGGAGAATCCGCCCGAAAGCGTTGTGCTCCACGCAGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FSSVTGTFLPLGFSS*WRIRPKALCSTQKV Trigger: TACCTTCTGCGTGGAGCACAACGCTTTCGGGCGGATTCTCCAGCATGAACTGAAACCCAATGGCAGAAATGTGCCTGTCACTGAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS CCA 90 bp | CGCTGTCAGCAGCTTCTCATAGAGCTTCTCATAGGACTCATAGGGTaGGATGTCGATCCGATTAAAGCAGGTATGGGCCTTGGGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RCQQLLIELLIGLIG*DVDPIKAGMGLGQV Trigger: AACCTGCCCAAGGCCCATACCTGCTTTAATCGGATCGACATCCCACCCTATGAGTCCTATGAGAAGCTCTATGAGAAGCTGCTGACAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GAAGACAAGGAAGCAAGCAAGCTGAGGAGAACTGTTAGCATCACGTTGCCACTGTGTTTCAGCCGGGTGTaGGACTTCCAGTCGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EDKEASKLRRTVSITLPLCFSRV*DFQSFR Trigger: CCTGAACGACTGGAAGTCCAACACCCGGCTGAAACA...CAGTGGCAACGTGATGCTAACAGTTCTCCTCAGCTTGCTTGCTTCCTTGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CACAAACAAAAACAACAAAACCACAAACGGAGGCATGGCTGCCGCTCTGCTGTGTGGGCCTTGGGCAGGTaGTCTGTATTGGCGTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: HKQKQQNHKRRHGCRSAVWALGR*SVLASI Trigger: GATAGACGCCAATACAGACAACCTGCCCAAGGCCCA...CACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS TCA 90 bp | GCCCAGAGCCGTCCACAACAATCTTGGCAAAGGGGTCGGGGAGTCTaGAGAAGTCTTTCTTTGCAAGGTTCTTGGCACACAATACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQSRPQQSWQRGRGV*RSLSLQGSWHTILS Trigger: TGACAGTATTGTGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGACTCCCCGACCCCTTTGCCAAGATTGTTGTGGACGGCTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS CCA 90 bp | TACAAAATAGATTCTTCCCGACACTGTGCTTCGGACTTCCCAGCCTaGAGGCAGTGGCCCAAGTTCATCGCAGTTCACACTGTTAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YKIDSSRHCASDFPA*RQWPKFIAVHTVKV Trigger: GACCTTAACAGTGTGAACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAATCTATTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTGCAGACGCCATATGCTTTGGGTCTGGTGGTTGTGAGCAAGACTCTGTGGTTCTTTGCAAGGTTCTaGGCACACAATACTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVQTPYALGLVVVSKTLWFFARF*AHNTVR Trigger: TCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGAA...CCACAGAGTCTTGCTCACAACCACCAGACCCAAAGCATATGGCGTCTGCACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCAGTGCTGGTTCCACTTaGGGTCCAGGGTGTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGSAGST*GPGCFS Trigger: TGAAAAACACCCTGGACCCAAAGTGGAACCAGCACT...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAATTCTTGTGGATCTTCTaGTGGTTCCACACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RINGWEPPRKVPWPALSKFLWIF*WFHTLM Trigger: CATCAGTGTGTGGAACCACAAGAAGATCCACAAGAA...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTCAGTCTGAGGGATTTAGTTaGCATAGATCCAAACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLQRRRETSLFPRFLESQSEGFS*HRSKRW Trigger: CCAGCGTTTGGATCTATGCAAACTAAATCCCTCAGA...CTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | AGAATAAATGGGTGGGAGCCACCTAGGAAAGTCCCCTGGCCTGCCCTCTCCAAAGTGCAAAAAGTAAACTaGTCCCTGCACTGTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RINGWEPPRKVPWPALSKVQKVN*SLHCCP Trigger: AGGACAACAGTGCAGGGACAAGTTTACTTTTTGCAC...TTTGGAGAGGGCAGGCCAGGGGACTTTCCTAGGTGGCTCCCACCCATTTATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTCTCCAAAGGAGGAGGGAGACGAGCCTTTTCCCTCGGTTTCTGGAATCTGTGCAAAAAGTAAACTaGTCCCTGCACTGTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CPLQRRRETSLFPRFLESVQKVN*SLHCCP Trigger: AGGACAACAGTGCAGGGACAAGTTTACTTTTTGCAC...AGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCTCCTCCTTTGGAGAGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS-3UTR CAA 90 bp | CACAAACAAAAACAACAAAACCACAAACGGAGGCATGGCTGCCGCTCTGCTGTGGCTGGGCTCCTTGAGTaGGCACTGGTGATTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: HKQKQQNHKRRHGCRSAVAGLLE*ALVIHD Trigger: ATCATGAATCACCAGTGCCAACTCAAGGAGCCCAGC...CACAGCAGAGCGGCAGCCATGCCTCCGTTTGTGGTTTTGTTGTTTTTGTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTGGCTCGTGCCTGAGAACTTaGAGCTTCTGGACTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPIPSLRVSNRKNTKAGGSCLRT*SFWTKS Trigger: GGACTTAGTCCAGAAGCTCAAAGTTCTCAGGCACGA...GCCACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| CDS GCA 90 bp | TTGTCCTATTATTGTGATCTACAAAATAGATTCTTCCCGACACTGTaGTTCGGACTTCCCAGCCTGGAGGCAGTGGCCCAAGTTCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSYYCDLQNRFFPTL*FGLPSLEAVAQVHR Trigger: GCGATGAACTTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAATCTATTTTGTAGATCACAATAATAGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS TCA 90 bp | AAGGGCTTCAGCAAGTGTTGGGGAATGAGTTCGTTAAACCCCTTCTaGAGTGCTAAGAACTGGGCTTCGATTCCTCTCATAAACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGFSKCWGMSSLNPF*SAKNWASIPLINLQ Trigger: CTGGAGGTTTATGAGAGGAATCGAAGCCCAGTTCTTAGCACTTCAGAAGGGGTTTAACGAACTCATTCCCCAACACTTGCTGAAGCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS-3UTR CAA 90 bp | CACTTCCCTATCCCCAGCCTGAGGGTAAGCAACAGAAAGAACACAAAAGCTGGTTTCTTGTGGATCTTCTaGTGGTTCCACACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HFPIPSLRVSNRKNTKAGFLWIF*WFHTLM Trigger: CATCAGTGTGTGGAACCACAAGAAGATCCACAAGAA...ACCAGCTTTTGTGTTCTTTCTGTTGCTTACCCTCAGGCTGGGGATAGGGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
||
| CDS TCA 90 bp | ACTTCACCATCAGGCGCTTCTTTAGGTCTTTTGGCCGCATCTTCATaGTCTGGCGATACGACTCCTCAAATATCTCTTCTCTGGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TSPSGASLGLLAASS*SGDTTPQISLLWRL Trigger: AAGTCTCCAGAGAAGAGATATTTGAGGAGTCGTATCGCCAGATCATGAAGATGCGGCCAAAAGACCTAAAGAAGCGCCTGATGGTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS GCA 90 bp | AACAATCTTGGCAAAGGGGTCGGGGAGTCTGAAGAAGTCTTTCTTTaGAAGGTTCTTGGCACACAATACTGTCAGACGGATCTTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NNLGKGVGESEEVFL*KVLGTQYCQTDLDA Trigger: AGCATCAAGATCCGTCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGACTCCCCGACCCCTTTGCCAAGATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
||
| CDS CAA 72 bp | ACTGGGCAGCTGCAGCGGCTGGCTGGGCTCCTTGAGTaGGCACTGGTGACTGGGGATCCTGGGGTCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGQLQRLAGLLE*ALVTGDPGVMP Trigger: TGGCATGACCCCAGGATCCCCAGTCACCAGTGCCAACTCAAGGAGCCCAGCCAGCCGCTGCAGCTGCCCAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198621.2 |
||
| CDS TCA 72 bp | GCCTTGGGCAGGTTGTCTGTATTGGCGTCTATCAGGTaGATGGTGAACAGCCGGGGCCCTGCCGCGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALGRLSVLASIR*MVNSRGPAAPC Trigger: GCAAGGCGCGGCAGGGCCCCGGCTGTTCACCATTCACCTGATAGACGCCAATACAGACAACCTGCCCAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100461.7 |
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| CDS CCA 72 bp | CCCGCCTCCTGCTGCTGCACCAGTACCATCTGTATATaGGGCAGGTTCCTCCATGAGGCAGCTGAGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PASCCCTSTICI*GRFLHEAAERP Trigger: AGGCCGCTCAGCTGCCTCATGGAGGAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS TCA 72 bp | GCCTTGGGCAGGTTGTCTGTATTGGCGTCTATCAGGTaGATGGTGAACAGCCGGGGCCCTGCCGCGCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ALGRLSVLASIR*MVNSRGPAAPV Trigger: TACAGGCGCGGCAGGGCCCCGGCTGTTCACCATTCACCTGATAGACGCCAATACAGACAACCTGCCCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085684.11 ENSMUST00000110677.8 |
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| CDS TCA 72 bp | TGCAGCGGCTGGCTGGGCTCCTTGAGTTGGCACTGGTaGCTGGGGATCCTGGGGTCATGCCATGTACTGACT | + |
|
Preference number: 6 (lower is better) Translates to: CSGWLGSLSWHW*LGILGSCHVLT Trigger: AGTCAGTACATGGCATGACCCCAGGATCCCCAGTCACCAGTGCCAACTCAAGGAGCCCAGCCAGCCGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198621.2 |
||
| CDS CCA 72 bp | GGCAGCTCTGGCGACTGGTGGCCATGTGGTCGGTTCTaGGGTGTCTGTAAGGGCCCTCGAACCTCAGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: GSSGDWWPCGRF*GVCKGPRTSGF Trigger: AAATCCTGAGGTTCGAGGGCCCTTACAGACACCCCAGAACCGACCACATGGCCACCAGTCGCCAGAGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS CAA 72 bp | ACTGGGCAGCTGCAGCGGCTGGCTGGGCTCCTTGAGTaGGCACTGGTGATTCATGATGTGGTGAAGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TGQLQRLAGLLE*ALVIHDVVKPW Trigger: CCACGGCTTCACCACATCATGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGCCGCTGCAGCTGCCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 90 bp | CCTCAGGATTTCGGAGTCGCTGTACCAGGAGTCTCTGATCTTGGCTaGGAGACTCCACAAACCTGCAGTTCCCGCCTCCTGCTGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PQDFGVAVPGVSDLG*ETPQTCSSRLLLLH Trigger: GTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGAAATCCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS CAA 90 bp | TCCTCATCGAAGGTCTCCACCGCCTGCCAGAACCACCTGACGATGTaGCTGTCTGCCACACAGTGTTTCAGCCGGGTGTTGGACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSKVSTACQNHLTM*LSATQCFSRVLDFQ Trigger: CTGGAAGTCCAACACCCGGCTGAAACACTGTGTGGCAGACAGCAACATCGTCAGGTGGTTCTGGCAGGCGGTGGAGACCTTCGATGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS GCA 72 bp | GCTTGGAGACTCCACAAACCTGCAGTTCCCGCCTCCTaGTGCTGCACCAGTACCATCTGTATATGGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AWRLHKPAVPAS*CCTSTICIWGR Trigger: CCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS CCA 72 bp | TCGGAGTCGCTGTACCAGGAGTCTCTGATCTTGGCTTaGAGACTCCACAAACCTGCAGTTCCCGCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SESLYQESLILA*RLHKPAVPASC Trigger: GCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS CAA 72 bp | AAGGTCTCCACCGCCTGCCAGAACCACCTGACGATGTaGCTGTCTGCCACACAGTGTTTCAGCCGGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KVSTACQNHLTM*LSATQCFSRVL Trigger: CAACACCCGGCTGAAACACTGTGTGGCAGACAGCAACATCGTCAGGTGGTTCTGGCAGGCGGTGGAGACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS TCA 72 bp | CAAGGTTCTTGGCACACAATACTGTCAGACGGATCTTaGTGCTGGAGCCGTTCCTACGGGTCCCGGGGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: QGSWHTILSDGS*CWSRSYGSRGS Trigger: CGAACCCCGGGACCCGTAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGTATTGTGTGCCAAGAACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS TCA 72 bp | TTCCTCCATGAGGCAGCTGAGCGGCCTTCCAGGGCCTaGGTCTTCATACACTGTTCCTTCGTTCTCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLHEAAERPSRA*VFIHCSFVLQQ Trigger: CTGCTGGAGAACGAAGGAACAGTGTATGAAGACTCAGGCCCTGGAAGGCCGCTCAGCTGCCTCATGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS GCA 72 bp | AGACTCCACAAACCTGCAGTTCCCGCCTCCTGCTGCTaGACCAGTACCATCTGTATATGGGGCAGGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLHKPAVPASCC*TSTICIWGRFL Trigger: GAGGAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS GCA 72 bp | TGGAGACTCCACAAACCTGCAGTTCCCGCCTCCTGCTaGTGCACCAGTACCATCTGTATATGGGGCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WRLHKPAVPASC*CTSTICIWGRF Trigger: GAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS GCA 72 bp | GGAGTCTCTGATCTTGGCTTGGAGACTCCACAAACCTaGAGTTCCCGCCTCCTGCTGCTGCACCAGTACCAT | + |
|
Preference number: 6 (lower is better) Translates to: GVSDLGLETPQT*SSRLLLLHQYH Trigger: ATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS CCA 72 bp | CGACACTGTGCTTCGGACTTCCCAGCCTGGAGGCAGTaGCCCAAGTTCATCGCAGTTCACACTGTTAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RHCASDFPAWRQ*PKFIAVHTVKV Trigger: GACCTTAACAGTGTGAACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CCA 72 bp | GATTCTTCCCGACACTGTGCTTCGGACTTCCCAGCCTaGAGGCAGTGGCCCAAGTTCATCGCAGTTCACACT | + |
|
Preference number: 6 (lower is better) Translates to: DSSRHCASDFPA*RQWPKFIAVHT Trigger: AGTGTGAACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | GCAAGGTTCTTGGCACACAATACTGTCAGACGGATCTaGATGCTGGAGCCGTTCCTACGGGTCCCGGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARFLAHNTVRRI*MLEPFLRVPGF Trigger: GAACCCCGGGACCCGTAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGTATTGTGTGCCAAGAACCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | TTCGGAGTCGCTGTACCAGGAGTCTCTGATCTTGGCTaGGAGACTCCACAAACCTGCAGTTCCCGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FGVAVPGVSDLG*ETPQTCSSRLL Trigger: CAGGAGGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS GCA 72 bp | TCCAGGGTGTTTTTCACAGTGTCGGTTGAGTGGCACTaGCCAGAGCCGTCCACAACAATCTTGGCAAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRVFFTVSVEWH*PEPSTTILAKG Trigger: CCCCTTTGCCAAGATTGTTGTGGACGGCTCTGGGCAGTGCCACTCAACCGACACTGTGAAAAACACCCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS GCA 72 bp | CTTCATACACTGTTCCTTCGTTCTCCAGCAGCCCTCTaGAGTCCACCACTGACCCTCCACCGCCTATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LHTLFLRSPAAL*SPPLTLHRLFC Trigger: ACAGAATAGGCGGTGGAGGGTCAGTGGTGGACTGCAGAGGGCTGCTGGAGAACGAAGGAACAGTGTATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | GTTGAGTGGCACTGCCCAGAGCCGTCCACAACAATCTaGGCAAAGGGGTCGGGGAGTCTGAAGAAGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VEWHCPEPSTTI*AKGSGSLKKSF Trigger: GAAAGACTTCTTCAGACTCCCCGACCCCTTTGCCAAGATTGTTGTGGACGGCTCTGGGCAGTGCCACTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | AGGATTTCGGAGTCGCTGTACCAGGAGTCTCTGATCTaGGCTTGGAGACTCCACAAACCTGCAGTTCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RISESLYQESLI*AWRLHKPAVPA Trigger: GGCGGGAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGAAATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS CAA 90 bp | ACAGTGTCGGTTGAGTGGCACTGCCCAGAGCCGTCCACAACAATCTaGGCAAAGGGGTCGGGGAGTCTGAAGAAGTCTTTCTTTGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVSVEWHCPEPSTTI*AKGSGSLKKSFFAR Trigger: CCTTGCAAAGAAAGACTTCTTCAGACTCCCCGACCCCTTTGCCAAGATTGTTGTGGACGGCTCTGGGCAGTGCCACTCAACCGACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 90 bp | CGCACACAGCCCAGGAAGCCAGCCCCCTGCTTCTTGTGGATCTTCTaGTGGTTCCACACACTGATGGTTATCGAGTCCGTTTTCCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: RTQPRKPAPCFLWIF*WFHTLMVIESVFPT Trigger: TGTTGGGAAAACGGACTCGATAACCATCAGTGTGTGGAACCACAAGAAGATCCACAAGAAGCAGGGGGCTGGCTTCCTGGGCTGTGTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS GCA 72 bp | CCTTGGAGAGGAACTCTTGTGGATCCTGTCACAAACTaGAGGAGTCTGGCTCTCCTCTCCTCATCGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PWRGTLVDPVTN*RSLALLSSSKV Trigger: GACCTTCGATGAGGAGAGGAGAGCCAGACTCCTGCAGTTTGTGACAGGATCCACAAGAGTTCCTCTCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CCA 72 bp | ACAGGCACATTTCTGCCATTGGGTTTCAGTTCATGCTaGAGAATCCGCCCGAAAGCGTTGTGCTCCACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGTFLPLGFSSC*RIRPKALCSTQ Trigger: CTGCGTGGAGCACAACGCTTTCGGGCGGATTCTCCAGCATGAACTGAAACCCAATGGCAGAAATGTGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | CCCAGGAAGCCAGCCCCCTGCTTCTTGTGGATCTTCTaGTGGTTCCACACACTGATGGTTATCGAGTCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PRKPAPCFLWIF*WFHTLMVIESV Trigger: AACGGACTCGATAACCATCAGTGTGTGGAACCACAAGAAGATCCACAAGAAGCAGGGGGCTGGCTTCCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS TCA 72 bp | ACCTCAGGATTTCGGAGTCGCTGTACCAGGAGTCTCTaGTCTTGGCTTGGAGACTCCACAAACCTGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSGFRSRCTRSL*SWLGDSTNLQF Trigger: GAACTGCAGGTTTGTGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGAAATCCTGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS TCA 72 bp | TTGGCTTCCCCAGGAGCTGCTTGTAGAACGGAACTGTaGAACCCCCATTTATGTAGTGTCCGTGGAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: LASPGAACRTEL*NPHLCSVRGTQ Trigger: CTGTGTTCCACGGACACTACATAAATGGGGGTTTCACAGTTCCGTTCTACAAGCAGCTCCTGGGGAAGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS TCA 72 bp | ATCCGCCCGAAAGCGTTGTGCTCCACGCAGAAGGTATaGTCCAACACAGGCGTGATGTCATTCTCTAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: IRPKALCSTQKV*SNTGVMSFSRI Trigger: GATTCTAGAGAATGACATCACGCCTGTGTTGGATCATACCTTCTGCGTGGAGCACAACGCTTTCGGGCGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | TCTGCGTGTGCAAAAAGTAAACTTGTCCCTGCACTGTaGTCCTTTGCTCATAGCCTTCAGGCAGCTCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SACAKSKLVPAL*SFAHSLQAALA Trigger: CGCCAGAGCTGCCTGAAGGCTATGAGCAAAGGACAACAGTGCAGGGACAAGTTTACTTTTTGCACACGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS TCA 72 bp | CGTCCACAACAATCTTGGCAAAGGGGTCGGGGAGTCTaGAGAAGTCTTTCTTTGCAAGGTTCTTGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: RPQQSWQRGRGV*RSLSLQGSWHT Trigger: TGTGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGACTCCCCGACCCCTTTGCCAAGATTGTTGTGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS GCA 72 bp | GGCAAAGGGGTCGGGGAGTCTGAAGAAGTCTTTCTTTaGAAGGTTCTTGGCACACAATACTGTCAGACGGAT | + |
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Preference number: 6 (lower is better) Translates to: GKGVGESEEVFL*KVLGTQYCQTD Trigger: ATCCGTCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGACTCCCCGACCCCTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS GCA 72 bp | TATTGTGATCTACAAAATAGATTCTTCCCGACACTGTaGTTCGGACTTCCCAGCCTGGAGGCAGTGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: YCDLQNRFFPTL*FGLPSLEAVAQ Trigger: TTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAGAATCTATTTTGTAGATCACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS TCA 72 bp | AGCCAGACCCATGATGCGACCCACAAAGTGGAAGTATaGCAGATGGTCAGGGTTGATAGAAGAATCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SQTHDATHKVEV*QMVRVDRRIWV Trigger: AACCCAGATTCTTCTATCAACCCTGACCATCTGTCATACTTCCACTTTGTGGGTCGCATCATGGGTCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS TCA 72 bp | TCAGGCGCTTCTTTAGGTCTTTTGGCCGCATCTTCATaGTCTGGCGATACGACTCCTCAAATATCTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SGASLGLLAASS*SGDTTPQISLL Trigger: GAGAAGAGATATTTGAGGAGTCGTATCGCCAGATCATGAAGATGCGGCCAAAAGACCTAAAGAAGCGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS TCA 72 bp | CATACAGCCGGACGTATTCCTTCTTGTTCTCCTCAGTaGCAGGCACATTTCTGCCATTGGGTTTCAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: HTAGRIPSCSPQ*QAHFCHWVSVH Trigger: ATGAACTGAAACCCAATGGCAGAAATGTGCCTGTCACTGAGGAGAACAAGAAGGAATACGTCCGGCTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS GCA 72 bp | GGCCACGAACTGCATCAGTATCTGAGGGATTTAGTTTaGATAGATCCAAACGCTGGTAGCCAGTGTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GHELHQYLRDLV*IDPNAGSQCLS Trigger: TGAAAGACACTGGCTACCAGCGTTTGGATCTATGCAAACTAAATCCCTCAGATACTGATGCAGTTCGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CCA 72 bp | CGCTTCTTTAGGTCTTTTGGCCGCATCTTCATGATCTaGCGATACGACTCCTCAAATATCTCTTCTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RFFRSFGRIFMI*RYDSSNISSLE Trigger: CTCCAGAGAAGAGATATTTGAGGAGTCGTATCGCCAGATCATGAAGATGCGGCCAAAAGACCTAAAGAAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS CCA 72 bp | TTATCCAGCCCACCTATTATCAGCTCTAGTTCCTTCTaGTCAAAGGGCTTCAGCAAGTGTTGGGGAATGAGT | + |
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Preference number: 6 (lower is better) Translates to: LSSPPIISSSSF*SKGFSKCWGMS Trigger: ACTCATTCCCCAACACTTGCTGAAGCCCTTTGACCAGAAGGAACTAGAGCTGATAATAGGTGGGCTGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | TCGGGGAGTCTGAAGAAGTCTTTCTTTGCAAGGTTCTaGGCACACAATACTGTCAGACGGATCTTGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGSLKKSFFARF*AHNTVRRILML Trigger: CAGCATCAAGATCCGTCTGACAGTATTGTGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGACTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CAA 72 bp | TGTACTGACTCCAGTCTGCGTGTGCAAAAAGTAAACTaGTCCCTGCACTGTTGTCCTTTGCTCATAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CTDSSLRVQKVN*SLHCCPLLIAF Trigger: GAAGGCTATGAGCAAAGGACAACAGTGCAGGGACAAGTTTACTTTTTGCACACGCAGACTGGAGTCAGTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 ENSMUST00000198621.2 |
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| CDS TCA 72 bp | AGCAAGTGTTGGGGAATGAGTTCGTTAAACCCCTTCTaGAGTGCTAAGAACTGGGCTTCGATTCCTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: SKCWGMSSLNPF*SAKNWASIPLI Trigger: TATGAGAGGAATCGAAGCCCAGTTCTTAGCACTTCAGAAGGGGTTTAACGAACTCATTCCCCAACACTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CCA 72 bp | GAGTTGGCACTGGTGATTCATGATGTGGTGAAGCCGTaGATCTGTAAACTGGGTTGTCCTATTATTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: ELALVIHDVVKP*ICKLGCPIIVI Trigger: GATCACAATAATAGGACAACCCAGTTTACAGATCCACGGCTTCACCACATCATGAATCACCAGTGCCAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085684.11 ENSMUST00000100461.7 ENSMUST00000110677.8 |
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| CDS CCA 72 bp | CAGTTCACACTGTTAAGGTCTCTGGGCTCGGATGTATaGCCTTGTAGAAGGAATTCGTATAGAAAAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QFTLLRSLGSDV*PCRRNSYRKAS Trigger: TGAAGCTTTTCTATACGAATTCCTTCTACAAGGCCATACATCCGAGCCCAGAGACCTTAACAGTGTGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110677.8 |
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