Pregenerated sensors for SMUG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036061Ensembl transcript IDs: ENSMUST00000064067.9, ENSMUST00000229371.2, ENSMUST00000229377.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGTGGTAGGTGGAGTGCACAGGCCCAACCCTCTGCTGATGCCGTaGATGACCAGACACTGGAGACAAAAGGGTGAGAGGCTCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: DVVGGVHRPNPLLMP*MTRHWRQKGERLKG Trigger: TCCCTTGAGCCTCTCACCCTTTTGTCTCCAGTGTCTGGTCATGCACGGCATCAGCAGAGGGTTGGGCCTGTGCACTCCACCTACCACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR GCA 90 bp | CTCCAAAACTGCGAATATGACTTCAGACATCCCGACCTAGGACTCTaGACTGCACACAGAGACTCCCAAGGCAAGGATGTGGTAGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LQNCEYDFRHPDLGL*TAHRDSQGKDVVGG Trigger: TCCACCTACCACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGGTCGGGATGTCTGAAGTCATATTCGCAGTTTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR TCA 90 bp | CAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCAATATGTAGCTaGAGGCGGCCTCGGACTCCTGATCTTCCTGCCTCTGAGTTATGG | + |
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Preference number: 1 (lower is better) Translates to: QRLMCSKLALNSICS*RRPRTPDLPASELW Trigger: CCATAACTCAGAGGCAGGAAGATCAGGAGTCCGAGGCCGCCTTCAGCTACATATTGAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR TCA 90 bp | CCTCAATACATACGGCTGGTCTTTCTGGAGGGTTGGCCTCCATCCTaGGTCAAAGTTCAACAAATTCTGGAATGCTCTGAGACCCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PQYIRLVFLEGWPPS*VKVQQILECSETPN Trigger: GTTGGGGGTCTCAGAGCATTCCAGAATTTGTTGAACTTTGACTCAGGATGGAGGCCAACCCTCCAGAAAGACCAGCCGTATGTATTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR CCA 90 bp | CTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTaGAGGTATAACTGGTCGAGATCATGGGCCATGTGGCTGAACTTA | + |
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Preference number: 1 (lower is better) Translates to: LSGNSSVQESWLGSL*RYNWSRSWAMWLNL Trigger: TAAGTTCAGCCACATGGCCCATGATCTCGACCAGTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR GCA 90 bp | GGACTCCTGATCTTCCTGCCTCTGAGTTATGGGATTACAGGAGTCTaGCAGATGATCTGTAAGGATGAGCAGGGATCCTGGAAAGATTGT | + |
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Preference number: 1 (lower is better) Translates to: GLLIFLPLSYGITGV*QMICKDEQGSWKDC Trigger: ACAATCTTTCCAGGATCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAGAGGCAGGAAGATCAGGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR GCA 90 bp | TTATCACAAATACAAATCAAGGGATGTAGCTCAGTGATAGAAGAGTaGATGCTTCCCATTCACAAAATTCTGGGCTTGATGCCCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: LSQIQIKGCSSVIEE*MLPIHKILGLMPRT Trigger: AGTTCTGGGCATCAAGCCCAGAATTTTGTGAATGGGAAGCATGCACTCTTCTATCACTGAGCTACATCCCTTGATTTGTATTTGTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR TCA 90 bp | CTATCACTGGGGAATCCTCAAAGGTTTAGTCTCCCTCTCTGGAGCTaGGATAGAAATATACTAATTTTTAGAATGCTGGAGATGACTTGT | + |
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Preference number: 1 (lower is better) Translates to: LSLGNPQRFSLPLWS*DRNILIFRMLEMTC Trigger: ACAAGTCATCTCCAGCATTCTAAAAATTAGTATATTTCTATCTCAGCTCCAGAGAGGGAGACTAAACCTTTGAGGATTCCCCAGTGATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR TCA 90 bp | GAGTCAAAGTTCAACAAATTCTGGAATGCTCTGAGACCCCCAACATaGATAATTACAACACTTCTATCACTGGGGAATCCTCAAAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: ESKFNKFWNALRPPT*IITTLLSLGNPQRF Trigger: AAACCTTTGAGGATTCCCCAGTGATAGAAGTGTTGTAATTATTCATGTTGGGGGTCTCAGAGCATTCCAGAATTTGTTGAACTTTGACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGACTCTGCACTGCACACAGAGACTCCCAAGGCAAGGATGTGGTAGGTGGAGACAGCAGGAGAGCTaGCCACCCTGGGCCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: PRTLHCTQRLPRQGCGRWRQQES*PPWAIR Trigger: TCTAATGGCCCAGGGTGGGCAGCTCTCCTGCTGTCT...CCACCTACCACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATGACAGTCCAGCAGGCTaGATGCAACACTGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQISCEVKAELVYDSPAG*MQHWLG Trigger: CCCCAGCCAGTGTTGCATTCAGCCTGCTGGACTGTC...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGACAGTCCAGCAGGCTaGATGCAACACTGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TCVHQPASLVETQVSKRADSPAG*MQHWLG Trigger: CCCCAGCCAGTGTTGCATTCAGCCTGCTGGACTGTC...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAGACAGTCCAGCAGGCTaGATGCAACACTGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SAFCKALCSVISVDPHTSDSPAG*MQHWLG Trigger: CCCCAGCCAGTGTTGCATTCAGCCTGCTGGACTGTC...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAACTGGAGACAAAAGGGTaGGAGGCTCAAGGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CKDEQGSWKDCPLTGEEELETKG*EAQGKG Trigger: CCCCTTCCCTTGAGCCTCTCACCCTTTTGTCTCCAG...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACTCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGGGAAAGATTGTCCACTaGCTGGGGAAGAGGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: STQEAEVGRFLVRSKRSWGKIVH*LGKRKC Trigger: ACACTTCCTCTTCCCCAGTCAGTGGACAATCTTTCC...CCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAAAGACAGCAGGAGAGCTaGCCACCCTGGGCCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: CKDEQGSWKDCPLTGEEERQQES*PPWAIR Trigger: TCTAATGGCCCAGGGTGGGCAGCTCTCCTGCTGTCT...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACCCCGACCTAGGACTCTaGACTGCACACAGAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: SGNSSVQESWLGSLWRYNPDLGL*TAHRDS Trigger: GGAGTCTCTGTGTGCAGTGCAGAGTCCTAGGTCGGG...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTGCATGACCAGACACTaGAGACAAAAGGGTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: STQEAEVGRFLVRSKRSWCMTRH*RQKGER Trigger: CCTCTCACCCTTTTGTCTCCAGTGTCTGGTCATGCA...CCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTTATGGGATTACAGGAGTCTGCCAGATGATCTGTAAGGATGAGCAGGGACTGGAGACAAAAGGGTaGGAGGCTCAAGGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSYGITGVCQMICKDEQGLETKG*EAQGKG Trigger: CCCCTTCCCTTGAGCCTCTCACCCTTTTGTCTCCAG...TCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACGATGGCCCTAAGACCTaGTGCTCTCACTGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SGNSSVQESWLGSLWRYNDGPKT*CSHCGS Trigger: TGAGCCACAGTGAGAGCAGCAGGTCTTAGGGCCATC...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGATGGCCCTAAGACCTaGTGCTCTCACTGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TCVHQPASLVETQVSKRADGPKT*CSHCGS Trigger: TGAGCCACAGTGAGAGCAGCAGGTCTTAGGGCCATC...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATTCGGTGTACGCTGAATaGCTGTGTGGAAACCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQISCEVKAELVYSVYAE*LCGNLT Trigger: TGTGAGGTTTCCACACAGGCATTCAGCGTACACCGA...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATCAGATAAAAGGGGGTTaGACTCCATCGGTGTACGCT | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQISCEVKAELVYQIKGG*TPSVYA Trigger: AGCGTACACCGATGGAGTCCAACCCCCTTTTATCTG...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATAGATTGTCCACTGACTaGGGAAGAGGAAGTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQISCEVKAELVYRLSTD*GRGSVE Trigger: CTCCACACTTCCTCTTCCCCAGTCAGTGGACAATCT...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGCTCAATACATACGGCTaGTCTTTCTGGAGGGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: KLSGNSSVQESWLGSLWRLNTYG*SFWRVG Trigger: GCCAACCCTCCAGAAAGACCAGCCGTATGTATTGAG...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR CAA 90 bp | GCTAAGCCCCAACCCTCAATACATACGGCTGGTCTTTCTGGAGGGTaGGCCTCCATCCTGAGTCAAAGTTCAACAAATTCTGGAATGCTC | + |
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Preference number: 2 (lower is better) Translates to: AKPQPSIHTAGLSGG*ASILSQSSTNSGML Trigger: GAGCATTCCAGAATTTGTTGAACTTTGACTCAGGATGGAGGCCAACCCTCCAGAAAGACCAGCCGTATGTATTGAGGGTTGGGGCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAATCGGTGTACGCTGAATaGCTGTGTGGAAACCTCACA | + |
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Preference number: 2 (lower is better) Translates to: CKDEQGSWKDCPLTGEEESVYAE*LCGNLT Trigger: TGTGAGGTTTCCACACAGGCATTCAGCGTACACCGA...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTCAGATAAAAGGGGGTTaGACTCCATCGGTGTACGCT | + |
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Preference number: 2 (lower is better) Translates to: TCVHQPASLVETQVSKRAQIKGG*TPSVYA Trigger: AGCGTACACCGATGGAGTCCAACCCCCTTTTATCTG...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTAGATTGTCCACTGACTaGGGAAGAGGAAGTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TCVHQPASLVETQVSKRARLSTD*GRGSVE Trigger: CTCCACACTTCCTCTTCCCCAGTCAGTGGACAATCT...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGGATGAGCAGGGATCCTaGAAAGATTGTCCACTGACT | + |
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Preference number: 2 (lower is better) Translates to: KLSGNSSVQESWLGSLWRDEQGS*KDCPLT Trigger: AGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATC...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACCTCAATACATACGGCTaGTCTTTCTGGAGGGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: SGNSSVQESWLGSLWRYNLNTYG*SFWRVG Trigger: GCCAACCCTCCAGAAAGACCAGCCGTATGTATTGAG...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGAACTGGTCGAGATCATaGGCCATGTGGCTGAACTTA | + |
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Preference number: 2 (lower is better) Translates to: KLSGNSSVQESWLGSLWRNWSRS*AMWLNL Trigger: TAAGTTCAGCCACATGGCCCATGATCTCGACCAGTT...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGGTTCCAAGCTGGCCTTaGACTCAATATGTAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: KLSGNSSVQESWLGSLWRVPSWP*TQYVAE Trigger: TTCAGCTACATATTGAGTTCAAGGCCAGCTTGGAAC...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATGTTCCAAGCTGGCCTTaGACTCAATATGTAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQISCEVKAELVYVPSWP*TQYVAE Trigger: TTCAGCTACATATTGAGTTCAAGGCCAGCTTGGAAC...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCATCGGTGTACGCTGAATaGCTGTGTGGAAACCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SAFCKALCSVISVDPHTSSVYAE*LCGNLT Trigger: TGTGAGGTTTCCACACAGGCATTCAGCGTACACCGA...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGGGGATTACAGGAGTCTaGCAGATGATCTGTAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: KLSGNSSVQESWLGSLWRGITGV*QMICKD Trigger: ATCCTTACAGATCATCTGGCAGACTCCTGTAATCCC...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCATGCATGACCAGACACTaGAGACAAAAGGGTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SAFCKALCSVISVDPHTSCMTRH*RQKGER Trigger: CCTCTCACCCTTTTGTCTCCAGTGTCTGGTCATGCA...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAAGATTGTCCACTGACTaGGGAAGAGGAAGTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SAFCKALCSVISVDPHTSRLSTD*GRGSVE Trigger: CTCCACACTTCCTCTTCCCCAGTCAGTGGACAATCT...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGGATTACAGGAGTCTaGCAGATGATCTGTAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: TCVHQPASLVETQVSKRAGITGV*QMICKD Trigger: ATCCTTACAGATCATCTGGCAGACTCCTGTAATCCC...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACGGGATTACAGGAGTCTaGCAGATGATCTGTAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SGNSSVQESWLGSLWRYNGITGV*QMICKD Trigger: ATCCTTACAGATCATCTGGCAGACTCCTGTAATCCC...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACCAACAAATTCTGGAATaGTCTGAGACCCCCAACATG | + |
|
Preference number: 2 (lower is better) Translates to: SGNSSVQESWLGSLWRYNQQILE*SETPNM Trigger: CATGTTGGGGGTCTCAGAGCATTCCAGAATTTGTTG...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTCAACAAATTCTGGAATaGTCTGAGACCCCCAACATG | + |
|
Preference number: 2 (lower is better) Translates to: TCVHQPASLVETQVSKRAQQILE*SETPNM Trigger: CATGTTGGGGGTCTCAGAGCATTCCAGAATTTGTTG...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGTCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACTGCATGACCAGACACTaGAGACAAAAGGGTGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YVSLLQSTLQCYLSRSSHCMTRH*RQKGER Trigger: CCTCTCACCCTTTTGTCTCCAGTGTCTGGTCATGCA...GTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAGATGAGCAGGGATCCTaGAAAGATTGTCCACTGACT | + |
|
Preference number: 2 (lower is better) Translates to: SAFCKALCSVISVDPHTSDEQGS*KDCPLT Trigger: AGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATC...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGTCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCCTGCCTCTGAGTTATaGGATTACAGGAGTCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YVSLLQSTLQCYLSRSSHPASEL*DYRSLP Trigger: TGGCAGACTCCTGTAATCCCATAACTCAGAGGCAGG...GTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGAGATCATGGGCCATGTaGCTGAACTTAATCTCTATC | + |
|
Preference number: 2 (lower is better) Translates to: KLSGNSSVQESWLGSLWRRSWAM*LNLISI Trigger: GATAGAGATTAAGTTCAGCCACATGGCCCATGATCT...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCAGACAGCAGGAGAGCTaGCCACCCTGGGCCATTAGA | + |
|
Preference number: 2 (lower is better) Translates to: YLLIFETETNVFQAGLELRQQES*PPWAIR Trigger: TCTAATGGCCCAGGGTGGGCAGCTCTCCTGCTGTCT...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCCCCGACCTAGGACTCTaGACTGCACACAGAGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: YLLIFETETNVFQAGLELPDLGL*TAHRDS Trigger: GGAGTCTCTGTGTGCAGTGCAGAGTCCTAGGTCGGG...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACTTTTGCAAAGCACTCTaGAGTGTTATCTCAGTCGAT | + |
|
Preference number: 2 (lower is better) Translates to: SGNSSVQESWLGSLWRYNFCKAL*SVISVD Trigger: ATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAA...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCCCTGCCTCTGAGTTATaGGATTACAGGAGTCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YLLIFETETNVFQAGLELPASEL*DYRSLP Trigger: TGGCAGACTCCTGTAATCCCATAACTCAGAGGCAGG...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR GCA 72 bp | GGTGGAGTGCACAGGCCCAACCCTCTGCTGATGCCGTaGATGACCAGACACTGGAGACAAAAGGGTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGVHRPNPLLMP*MTRHWRQKGER Trigger: CCTCTCACCCTTTTGTCTCCAGTGTCTGGTCATGCACGGCATCAGCAGAGGGTTGGGCCTGTGCACTCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGCAAAACCCCTGCAGCTaGGCTAGGGCAATCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KLSGNSSVQESWLGSLWRQNPCS*ARAIRG Trigger: ACCTCTGATTGCCCTAGCCAAGCTGCAGGGGTTTTG...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR TCA 72 bp | ATGTGTTCCAAGCTGGCCTTGAACTCAATATGTAGCTaGAGGCGGCCTCGGACTCCTGATCTTCCTGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MCSKLALNSICS*RRPRTPDLPAS Trigger: AGAGGCAGGAAGATCAGGAGTCCGAGGCCGCCTTCAGCTACATATTGAGTTCAAGGCCAGCTTGGAACACAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR GCA 72 bp | TGCGAATATGACTTCAGACATCCCGACCTAGGACTCTaGACTGCACACAGAGACTCCCAAGGCAAGGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: CEYDFRHPDLGL*TAHRDSQGKDV Trigger: CACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGGTCGGGATGTCTGAAGTCATATTCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR CCA 72 bp | AACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTaGAGGTATAACTGGTCGAGATCATGGGCCATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NSSVQESWLGSL*RYNWSRSWAMW Trigger: CCACATGGCCCATGATCTCGACCAGTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATACAGATAAAAGGGGGTaGGACTCCATCGGTGTACGC | + |
|
Preference number: 3 (lower is better) Translates to: SGGRGRQISCEVKAELVYTDKRG*DSIGVR Trigger: GCGTACACCGATGGAGTCCAACCCCCTTTTATCTGT...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACGGGATCCTGGAAAGATaGTCCACTGACTGGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGNSSVQESWLGSLWRYNGILER*STDWGR Trigger: TCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCC...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGACACCAGCTCCTCATaGTTCCCAACAGTTGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: TCVHQPASLVETQVSKRADTSSS*FPTVAL Trigger: TAGGGCAACTGTTGGGAACAATGAGGAGCTGGTGTC...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATATAAGTTCTCTGAGTTaGAGGCCAACCCGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: SGGRGRQISCEVKAELVYISSLS*RPTRST Trigger: TGTAGACCGGGTTGGCCTCAAACTCAGAGAACTTAT...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR GCA 72 bp | ATCTTCCTGCCTCTGAGTTATGGGATTACAGGAGTCTaGCAGATGATCTGTAAGGATGAGCAGGGATCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IFLPLSYGITGV*QMICKDEQGSW Trigger: CCAGGATCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAGAGGCAGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR CCA 72 bp | AGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTaGCTAGGGTCACTGTGGAGGTATAACTGGTCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKLSGNSSVQES*LGSLWRYNWSR Trigger: TCTCGACCAGTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGTCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACACAGATAAAAGGGGGTaGGACTCCATCGGTGTACGC | + |
|
Preference number: 3 (lower is better) Translates to: YVSLLQSTLQCYLSRSSHTDKRG*DSIGVR Trigger: GCGTACACCGATGGAGTCCAACCCCCTTTTATCTGT...GTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGTCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACGGGATCCTGGAAAGATaGTCCACTGACTGGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YVSLLQSTLQCYLSRSSHGILER*STDWGR Trigger: TCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCC...GTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTCCATATGTCAGCCTTTaGCAAAGCACTCTGCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TCVHQPASLVETQVSKRAPYVSL*QSTLQC Trigger: ACACTGCAGAGTGCTTTGCAAAAGGCTGACATATGG...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR TCA 72 bp | ATACGGCTGGTCTTTCTGGAGGGTTGGCCTCCATCCTaGGTCAAAGTTCAACAAATTCTGGAATGCTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IRLVFLEGWPPS*VKVQQILECSE Trigger: CTCAGAGCATTCCAGAATTTGTTGAACTTTGACTCAGGATGGAGGCCAACCCTCCAGAAAGACCAGCCGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR GCA 72 bp | AGTGAGGACCATATGTCAGCCTTTTGCAAAGCACTCTaGAGTGTTATCTCAGTCGATCCTCACACCTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: SEDHMSAFCKAL*SVISVDPHTSH Trigger: GTGTGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGACATATGGTCCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| 3UTR CCA 72 bp | CTGTGGAGGTATAACTGGTCGAGATCATGGGCCATGTaGCTGAACTTAATCTCTATCCTTGTCCCATTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LWRYNWSRSWAM*LNLISILVPFW Trigger: CCAGAATGGGACAAGGATAGAGATTAAGTTCAGCCACATGGCCCATGATCTCGACCAGTTATACCTCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR TCA 72 bp | AAGGGAGGAGATAACCTAAAATCATTCTCCCACCAATaGAGTGTAGGAAGAGAGGAGAGACCCAACACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KGGDNLKSFSHQ*SVGREERPNTR Trigger: CCTTGTGTTGGGTCTCTCCTCTCTTCCTACACTTCATTGGTGGGAGAATGATTTTAGGTTATCTCCTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR TCA 72 bp | AAGAGTGCATGCTTCCCATTCACAAAATTCTGGGCTTaGTGCCCAGAACTCCAAAATGACACACAGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KSACFPFTKFWA*CPELQNDTQST Trigger: TGTGCTCTGTGTGTCATTTTGGAGTTCTGGGCATCAAGCCCAGAATTTTGTGAATGGGAAGCATGCACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCACAGATAAAAGGGGGTaGGACTCCATCGGTGTACGC | + |
|
Preference number: 3 (lower is better) Translates to: YLLIFETETNVFQAGLELTDKRG*DSIGVR Trigger: GCGTACACCGATGGAGTCCAACCCCCTTTTATCTGT...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR GCA 90 bp | CCTAGGACTCTGCACTGCACACAGAGACTCCCAAGGCAAGGATGTGGTAGGTGGCCTAGCAGCTGCACCTaGCGGCAGAGGGCTGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRTLHCTQRLPRQGCGRWPSSCT*RQRAAS Trigger: CGACGCAGCCCTCTGCCGGCAGGTGCAGCTGCTAGG...CCACCTACCACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAAGTGTGGAGAGGGCTGCTCCCGCTGCTTaGCGGGCAGCTCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGILERLSTDWGRGSVERAAPAA*RAAQLG Trigger: CCCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGC...CCTCTCCACACTTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | AGCACTCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGGCTGCTCCCGCTGCTTaGCGGGCAGCTCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STQEAEVGRFLVRSKRSWAAPAA*RAAQLG Trigger: CCCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGC...CCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGAGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGACTCTGCACTGCACACAGAGACTCCCAAGGCAAGGATGTGGTAGGTGGATGGGTAGGCCCCAGTaGGAAGGTCTGGGACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRTLHCTQRLPRQGCGRWMGRPQ*EGLGRS Trigger: GCTGCGTCCCAGACCTTCCCACTGGGGCCTACCCAT...CCACCTACCACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | CCATCGGTGTACGCTGAATGCCTGTGTGGAAACCTCACACTGAACCCCACTAGTACGGGCTCCGGGAACTaGAGCTGGCTCAGCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVYAECLCGNLTLNPTSTGSGN*SWLSSA Trigger: TGCCGAGCTGAGCCAGCTGCAGTTCCCGGAGCCCGT...ACTAGTGGGGTTCAGTGTGAGGTTTCCACACAGGCATTCAGCGTACACCGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATGCTCTTCGGGCTCGCTaGTCTGCCAGCCGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGRQISCEVKAELVYALRAR*SASRPT Trigger: AGTGGGGCGGCTGGCAGAGCAGCGAGCCCGAAGAGC...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGAGGAGCCCCTCCACCTaGACCTCCGGGGTCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSGNSSVQESWLGSLWRRSPST*TSGVSP Trigger: AGGGCTGACCCCGGAGGTGCAGGTGGAGGGGCTCCT...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGCTGCTCCCGCTGCTTaGCGGGCAGCTCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCVHQPASLVETQVSKRAAAPAA*RAAQLG Trigger: CCCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGC...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR TCA 90 bp | CCATCGGTGTACGCTGAATGCCTGTGTGGAAACCTCACACTGAACCCCACTAGTGGCTCAGCTCGGCATTaGGCCGAAGCTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVYAECLCGNLTLNPTSGSARH*AEAPPP Trigger: TGGAGGAGGAGCTTCGGCTCAATGCCGAGCTGAGCC...ACTAGTGGGGTTCAGTGTGAGGTTTCCACACAGGCATTCAGCGTACACCGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGAGCAGCTGCTCCCGCTaGTTGGCGGGCAGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSGNSSVQESWLGSLWRSSCSR*LAGSSA Trigger: AGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCTGCT...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTCCTAGCAGCTGCACCTaGCGGCAGAGGGCTGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TCVHQPASLVETQVSKRAPSSCT*RQRAAS Trigger: CGACGCAGCCCTCTGCCGGCAGGTGCAGCTGCTAGG...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACGCTCTTCGGGCTCGCTaGTCTGCCAGCCGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SGNSSVQESWLGSLWRYNALRAR*SASRPT Trigger: AGTGGGGCGGCTGGCAGAGCAGCGAGCCCGAAGAGC...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAAAGGAGCCCCTCCACCTaGACCTCCGGGGTCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKDEQGSWKDCPLTGEEERSPST*TSGVSP Trigger: AGGGCTGACCCCGGAGGTGCAGGTGGAGGGGCTCCT...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTAGGAGCCCCTCCACCTaGACCTCCGGGGTCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCVHQPASLVETQVSKRARSPST*TSGVSP Trigger: AGGGCTGACCCCGGAGGTGCAGGTGGAGGGGCTCCT...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | AGCACTCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGCTTCGAGGAGATGGATaGAGGAGCCCCTCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STQEAEVGRFLVRSKRSWLRGDG*RSPSTC Trigger: GCAGGTGGAGGGGCTCCTGCATCCATCTCCTCGAAG...CCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATGGCTCAGCTCGGCATTaGGCCGAAGCTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGRQISCEVKAELVYGSARH*AEAPPP Trigger: TGGAGGAGGAGCTTCGGCTCAATGCCGAGCTGAGCC...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR TCA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAACCACCGGGTTGTAGATaGCACCCACGGGCTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKDEQGSWKDCPLTGEEEPPGCR*HPRAPG Trigger: TCCCGGAGCCCGTGGGTGTCATCTACAACCCGGTGG...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGGACTCTGCACTGCACACAGAGACTCCCAAGGCAAGGATGTGGTAGGTGGCCCCTGTTTGGGCCATaGCAAAAGGTCCTGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRTLHCTQRLPRQGCGRWPLFGP*QKVLGS Trigger: TGAACCCAGGACCTTTTGGCATGGCCCAAACAGGGG...CCACCTACCACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGTATAACCAGATCGACAGCAGCTaGTCCCGCTGCTTGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGNSSVQESWLGSLWRYNQIDSS*SRCLAG Trigger: GCCCGCCAAGCAGCGGGAGCAGCTGCTGTCGATCTG...GTTATACCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGATGGGTAGGCCCCAGTaGGAAGGTCTGGGACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSGNSSVQESWLGSLWRMGRPQ*EGLGRS Trigger: GCTGCGTCCCAGACCTTCCCACTGGGGCCTACCCAT...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATCCTGGAGTCTTTCCCTaGCTGCCGCCTCCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGRQISCEVKAELVYPGVFP*LPPPSL Trigger: AAGGCTGGGAGGCGGCAGCCAGGGAAAGACTCCAGG...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGCCTGGAGTCTTTCCCTaGCTGCCGCCTCCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLSGNSSVQESWLGSLWRPGVFP*LPPPSL Trigger: AAGGCTGGGAGGCGGCAGCCAGGGAAAGACTCCAGG...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAACGGGCTCCGGGAACTaGAGCTGGCTCAGCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAFCKALCSVISVDPHTSTGSGN*SWLSSA Trigger: TGCCGAGCTGAGCCAGCTGCAGTTCCCGGAGCCCGT...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATACTGGTCGCTTGGGGTaGTCTTGTGGAGGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGRQISCEVKAELVYTGRLG*SCGGVS Trigger: GCTGACCCCTCCACAAGAGCACCCCAAGCGACCAGT...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGACTGGTCGCTTGGGGTaGTCTTGTGGAGGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSGNSSVQESWLGSLWRTGRLG*SCGGVS Trigger: GCTGACCCCTCCACAAGAGCACCCCAAGCGACCAGT...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAAGCAGCTGCTCCCGCTaGTTGGCGGGCAGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFCKALCSVISVDPHTSSSCSR*LAGSSA Trigger: AGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCTGCT...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | CCATCGGTGTACGCTGAATGCCTGTGTGGAAACCTCACACTGAACCCCACTAGTCTCCAGTCCCAACACTaGTCGCTTGGGGTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSVYAECLCGNLTLNPTSLQSQH*SLGVLL Trigger: CAAGAGCACCCCAAGCGACCAGTGTTGGGACTGGAG...ACTAGTGGGGTTCAGTGTGAGGTTTCCACACAGGCATTCAGCGTACACCGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTATGGGATTACAGGAGTCTGCCAGATGATCTGTAAGGATGAGCAGGGAGGCTCAGCTCGGCATTaGGCCGAAGCTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSYGITGVCQMICKDEQGGSARH*AEAPPP Trigger: TGGAGGAGGAGCTTCGGCTCAATGCCGAGCTGAGCC...TCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | CCATCGGTGTACGCTGAATGCCTGTGTGGAAACCTCACACTGAACCCCACTAGTCCCCTGTTTGGGCCATaGCAAAAGGTCCTGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVYAECLCGNLTLNPTSPLFGP*QKVLGS Trigger: TGAACCCAGGACCTTTTGGCATGGCCCAAACAGGGG...ACTAGTGGGGTTCAGTGTGAGGTTTCCACACAGGCATTCAGCGTACACCGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAACTTCGAGGAGATGGATaGAGGAGCCCCTCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CKDEQGSWKDCPLTGEEELRGDG*RSPSTC Trigger: GCAGGTGGAGGGGCTCCTGCATCCATCTCCTCGAAG...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | CCATCGGTGTACGCTGAATGCCTGTGTGGAAACCTCACACTGAACCCCACTAGTGCCTTTGTTGGCCTGTaGGCTTCGAGGAGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PSVYAECLCGNLTLNPTSAFVGL*ASRRWM Trigger: CATCCATCTCCTCGAAGCGCACAGGCCAACAAAGGC...ACTAGTGGGGTTCAGTGTGAGGTTTCCACACAGGCATTCAGCGTACACCGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTATGGGATTACAGGAGTCTGCCAGATGATCTGTAAGGATGAGCAGGGAATGGGTAGGCCCCAGTaGGAAGGTCTGGGACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYGITGVCQMICKDEQGMGRPQ*EGLGRS Trigger: GCTGCGTCCCAGACCTTCCCACTGGGGCCTACCCAT...TCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATCTCCAGTCCCAACACTaGTCGCTTGGGGTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGRQISCEVKAELVYLQSQH*SLGVLL Trigger: CAAGAGCACCCCAAGCGACCAGTGTTGGGACTGGAG...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCACTTCGAGGAGATGGATaGAGGAGCCCCTCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAFCKALCSVISVDPHTSLRGDG*RSPSTC Trigger: GCAGGTGGAGGGGCTCCTGCATCCATCTCCTCGAAG...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | TATGTCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCCTGGAGTCTTTCCCTaGCTGCCGCCTCCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YVSLLQSTLQCYLSRSSHPGVFP*LPPPSL Trigger: AAGGCTGGGAGGCGGCAGCCAGGGAAAGACTCCAGG...GTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTCCCCTGTTTGGGCCATaGCAAAAGGTCCTGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCVHQPASLVETQVSKRAPLFGP*QKVLGS Trigger: TGAACCCAGGACCTTTTGGCATGGCCCAAACAGGGG...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATAAGGTCCTGGGTTCATaGCCAAGAACAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGRQISCEVKAELVYKVLGS*PRTALP Trigger: AGGAAGTGCTGTTCTTGGGCATGAACCCAGGACCTT...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAGCCTTTGTTGGCCTGTaGGCTTCGAGGAGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SAFCKALCSVISVDPHTSAFVGL*ASRRWM Trigger: CATCCATCTCCTCGAAGCGCACAGGCCAACAAAGGC...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGGCTAGGGTCACTGTGGAGGAGAGGACACAGATTGTaGACAAAGCAGTGCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSGNSSVQESWLGSLWRRGHRL*TKQCRK Trigger: CTTCCGGCACTGCTTTGTCCACAATCTGTGTCCTCT...CCTCCACAGTGACCCTAGCCAGCTCTCTTGGACACTTGAGTTTCCACTAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR TCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCCCACCGGGTTGTAGATaGCACCCACGGGCTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLLIFETETNVFQAGLELPPGCR*HPRAPG Trigger: TCCCGGAGCCCGTGGGTGTCATCTACAACCCGGTGG...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCCAGATCGACAGCAGCTaGTCCCGCTGCTTGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YLLIFETETNVFQAGLELQIDSS*SRCLAG Trigger: GCCCGCCAAGCAGCGGGAGCAGCTGCTGTCGATCTG...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTATGGGATTACAGGAGTCTGCCAGATGATCTGTAAGGATGAGCAGGGAAAGGGTACCCCTGTTTaGGCCATGCCAAAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYGITGVCQMICKDEQGKGTPV*AMPKGP Trigger: AGGACCTTTTGGCATGGCCCAAACAGGGGTACCCTT...TCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAAAGGGTACCCCTGTTTaGGCCATGCCAAAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFCKALCSVISVDPHTSKGTPV*AMPKGP Trigger: AGGACCTTTTGGCATGGCCCAAACAGGGGTACCCTT...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTAGAGGACACAGATTGTaGACAAAGCAGTGCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCVHQPASLVETQVSKRARGHRL*TKQCRK Trigger: CTTCCGGCACTGCTTTGTCCACAATCTGTGTCCTCT...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTTATGGGATTACAGGAGTCTGCCAGATGATCTGTAAGGATGAGCAGGGAAAGGTCCTGGGTTCATaGCCAAGAACAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYGITGVCQMICKDEQGKVLGS*PRTALP Trigger: AGGAAGTGCTGTTCTTGGGCATGAACCCAGGACCTT...TCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTATGGGATTACAGGAGTCTGCCAGATGATCTGTAAGGATGAGCAGGGAAGAGGACACAGATTGTaGACAAAGCAGTGCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSYGITGVCQMICKDEQGRGHRL*TKQCRK Trigger: CTTCCGGCACTGCTTTGTCCACAATCTGTGTCCTCT...TCCCTGCTCATCCTTACAGATCATCTGGCAGACTCCTGTAATCCCATAACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCCTCCAGTCCCAACACTaGTCGCTTGGGGTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLIFETETNVFQAGLELLQSQH*SLGVLL Trigger: CAAGAGCACCCCAAGCGACCAGTGTTGGGACTGGAG...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCGCCTTTGTTGGCCTGTaGGCTTCGAGGAGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YLLIFETETNVFQAGLELAFVGL*ASRRWM Trigger: CATCCATCTCCTCGAAGCGCACAGGCCAACAAAGGC...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR GCA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCAAGGTCCTGGGTTCATaGCCAAGAACAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLIFETETNVFQAGLELKVLGS*PRTALP Trigger: AGGAAGTGCTGTTCTTGGGCATGAACCCAGGACCTT...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS GCA 90 bp | TGCCGGCAGAGGGCTGCGTCGCAGATCGACAGCAGCTGCTCCCGCTaGTTGGCGGGCAGCTCAGCTGGGGTAAGGTTTCGTCCACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CRQRAASQIDSSCSR*LAGSSAGVRFRPLG Trigger: TCCCAGTGGACGAAACCTTACCCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCTGCTGTCGATCTGCGACGCAGCCCTCTGCCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS CCA 90 bp | CATCCGTTAGCAGAGGCAGCAGCCCCAACTCCTGGAGTCTTTCCCTaGCTGCCGCCTCCCAGCCTTTGTTGGCCTGTGCGCTTCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPLAEAAAPTPGVFP*LPPPSLCWPVRFEE Trigger: CTCCTCGAAGCGCACAGGCCAACAAAGGCTGGGAGGCGGCAGCCAGGGAAAGACTCCAGGAGTTGGGGCTGCTGCCTCTGCTAACGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGGACTCTGCACTGCACACAGAGACTCCCAAGGCAAGGATGTGGTAGGTGGAGCTGCTCCCGCTGCTaGGCGGGCAGCTCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRTLHCTQRLPRQGCGRWSCSRC*AGSSAG Trigger: CCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCT...CCACCTACCACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CAA 90 bp | AGCACTCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGAGCTGCTCCCGCTGCTaGGCGGGCAGCTCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: STQEAEVGRFLVRSKRSWSCSRC*AGSSAG Trigger: CCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCT...CCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGAGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGGACTCTGCACTGCACACAGAGACTCCCAAGGCAAGGATGTGGTAGGTGGGCCGCCTCCCAGCCTTaGTTGGCCTGTGCGCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: PRTLHCTQRLPRQGCGRWAASQP*LACALR Trigger: TCGAAGCGCACAGGCCAACAAAGGCTGGGAGGCGGC...CCACCTACCACATCCTTGCCTTGGGAGTCTCTGTGTGCAGTGCAGAGTCCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAAGTGTGGAGAGGGCCTCCCAGCCTTTGTaGGCCTGTGCGCTTCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: AGILERLSTDWGRGSVERASQPL*ACALRG Trigger: TCCTCGAAGCGCACAGGCCAACAAAGGCTGGGAGGC...CCTCTCCACACTTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATGCCGCCTCCCAGCCTTaGTTGGCCTGTGCGCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: SGGRGRQISCEVKAELVYAASQP*LACALR Trigger: TCGAAGCGCACAGGCCAACAAAGGCTGGGAGGCGGC...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGTCTATGCCTCCCAGCCTTTGTaGGCCTGTGCGCTTCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: SGGRGRQISCEVKAELVYASQPL*ACALRG Trigger: TCCTCGAAGCGCACAGGCCAACAAAGGCTGGGAGGC...ATAGACCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTTGGCTCAGCTCGGCATaGAGCCGAAGCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TCVHQPASLVETQVSKRAWLSSA*SRSSSS Trigger: GGAGGAGGAGCTTCGGCTCAATGCCGAGCTGAGCCA...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAATGGCTCAGCTCGGCATaGAGCCGAAGCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: CKDEQGSWKDCPLTGEEEWLSSA*SRSSSS Trigger: GGAGGAGGAGCTTCGGCTCAATGCCGAGCTGAGCCA...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | AGCACTCAGGAGGCAGAGGTAGGCAGATTTCTTGTGAGGTCAAAGCGGAGCTGGAAAGGGTACCCCTGTTaGGGCCATGCCAAAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: STQEAEVGRFLVRSKRSWKGYPC*GHAKRS Trigger: GGACCTTTTGGCATGGCCCAAACAGGGGTACCCTTT...CCAGCTCCGCTTTGACCTCACAAGAAATCTGCCTACCTCTGCCTCCTGAGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAAGTGTGGAGAGGAAAGGGTACCCCTGTTaGGGCCATGCCAAAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AGILERLSTDWGRGSVERKGYPC*GHAKRS Trigger: GGACCTTTTGGCATGGCCCAAACAGGGGTACCCTTT...CCTCTCCACACTTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | ACATGTGTGCACCAGCCAGCAAGCTTAGTGGAAACTCAAGTGTCCAAGAGAGCTGCCTCCCAGCCTTTGTaGGCCTGTGCGCTTCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: TCVHQPASLVETQVSKRAASQPL*ACALRG Trigger: TCCTCGAAGCGCACAGGCCAACAAAGGCTGGGAGGC...AGCTCTCTTGGACACTTGAGTTTCCACTAAGCTTGCTGGCTGGTGCACACATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCATGGCTCAGCTCGGCATaGAGCCGAAGCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SAFCKALCSVISVDPHTSWLSSA*SRSSSS Trigger: GGAGGAGGAGCTTCGGCTCAATGCCGAGCTGAGCCA...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TATGTCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACGCCGCCTCCCAGCCTTaGTTGGCCTGTGCGCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: YVSLLQSTLQCYLSRSSHAASQP*LACALR Trigger: TCGAAGCGCACAGGCCAACAAAGGCTGGGAGGCGGC...GTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TACTTACTTATTTTTGAGACAGAGACTAATGTGTTCCAAGCTGGCCTTGAACTCAGCTGCTCCCGCTGCTaGGCGGGCAGCTCAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: YLLIFETETNVFQAGLELSCSRC*AGSSAG Trigger: CCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCT...GAGTTCAAGGCCAGCTTGGAACACATTAGTCTCTGTCTCAAAAATAAGTAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TGTAAGGATGAGCAGGGATCCTGGAAAGATTGTCCACTGACTGGGGAAGAGGAAAGTAGAGGACACAGATaGTGGACAAAGCAGTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: CKDEQGSWKDCPLTGEEESRGHR*WTKQCR Trigger: CCGGCACTGCTTTGTCCACAATCTGTGTCCTCTACT...TTCCTCTTCCCCAGTCAGTGGACAATCTTTCCAGGATCCCTGCTCATCCTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCTTTTGCAAAGCACTCTGCAGTGTTATCTCAGTCGATCCTCACACCTCAAGTAGAGGACACAGATaGTGGACAAAGCAGTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SAFCKALCSVISVDPHTSSRGHR*WTKQCR Trigger: CCGGCACTGCTTTGTCCACAATCTGTGTCCTCTACT...TGAGGTGTGAGGATCGACTGAGATAACACTGCAGAGTGCTTTGCAAAAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS CAA 90 bp | CGGCAGAGGGCTGCGTCGCAGATCGACAGCAGCTGCTCCCGCTGCTaGGCGGGCAGCTCAGCTGGGGTAAGGTTTCGTCCACTGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RQRAASQIDSSCSRC*AGSSAGVRFRPLGA Trigger: GGCTCCCAGTGGACGAAACCTTACCCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCTGCTGTCGATCTGCGACGCAGCCCTCTGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS CCA 72 bp | GCAGAGGCAGCAGCCCCAACTCCTGGAGTCTTTCCCTaGCTGCCGCCTCCCAGCCTTTGTTGGCCTGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: AEAAAPTPGVFP*LPPPSLCWPVR Trigger: GCGCACAGGCCAACAAAGGCTGGGAGGCGGCAGCCAGGGAAAGACTCCAGGAGTTGGGGCTGCTGCCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS GCA 72 bp | AGGGCTGCGTCGCAGATCGACAGCAGCTGCTCCCGCTaGTTGGCGGGCAGCTCAGCTGGGGTAAGGTTTCGT | + |
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Preference number: 6 (lower is better) Translates to: RAASQIDSSCSR*LAGSSAGVRFR Trigger: ACGAAACCTTACCCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCTGCTGTCGATCTGCGACGCAGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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| CDS CAA 72 bp | GCTGCGTCGCAGATCGACAGCAGCTGCTCCCGCTGCTaGGCGGGCAGCTCAGCTGGGGTAAGGTTTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AASQIDSSCSRC*AGSSAGVRFRP Trigger: TGGACGAAACCTTACCCCAGCTGAGCTGCCCGCCAAGCAGCGGGAGCAGCTGCTGTCGATCTGCGACGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064067.9 ENSMUST00000229371.2 ENSMUST00000229377.2 |
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