Pregenerated sensors for SMTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020439Ensembl transcript IDs: ENSMUST00000020718.10, ENSMUST00000020721.15, ENSMUST00000075118.10, ENSMUST00000110011.8, ENSMUST00000136243.2, ENSMUST00000156201.8, ENSMUST00000170588.8
Found 515 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTaGCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTACAGCG | + |
Preference number: 1 (lower is better) Translates to: AARSAGGVSRVARHS*RANAAHGAAGGCTA Trigger: CGCTGTACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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3UTR-3UTR CCA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACGCAAACGCAGCTCATaGCGCCGCAGGTGGTTGTAC | + |
Preference number: 2 (lower is better) Translates to: GGVGTAARSAGGVSRVARRKRSS*RRRWLY Trigger: GTACAACCACCTGCGGCGCCATGAGCTGCGTTTGCG...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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3UTR-3UTR CCA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGATCATGGCGCCGCAGGTaGTTGTACAGCGATTGCACA | + |
Preference number: 2 (lower is better) Translates to: GGVGTAARSAGGVSRVARSWRRR*LYSDCT Trigger: TGTGCAATCGCTGTACAACCACCTGCGGCGCCATGA...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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3UTR CCA 72 bp | GCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTaGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGG | + |
Preference number: 3 (lower is better) Translates to: AAVGRRTGRCRC*GRGDSSPQRRR Trigger: CCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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3UTR TCA 72 bp | GGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTaGGCAGAGTGGCTAGACATTCTTGCCGCGCAAACG | + |
Preference number: 3 (lower is better) Translates to: GAWGQQPAAQAV*AEWLDILAAQT Trigger: CGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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3UTR GCA 72 bp | AGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTaGCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGT | + |
Preference number: 3 (lower is better) Translates to: SAGGVSRVARHS*RANAAHGAAGG Trigger: ACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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3UTR-3UTR CAA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCATTGGGGTCGGGCTTTTaGCCCATGATCATCATGTCC | + |
Preference number: 3 (lower is better) Translates to: AARSAGGVSRVARHSCRALGSGF*PMIIMS Trigger: GGACATGATGATCATGGGCAAAAAGCCCGACCCCAA...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCCCCTGGCTCCCCAGTaGCAACGGCCACGGGCGGTG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSPLAPQ*QRPRAV Trigger: CACCGCCCGTGGCCGTTGGCACTGGGGAGCCAGGGG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCAGCTCCCGGATGGCTaGGCGGATCCGCCGCCGTTC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCQLPDG*ADPPPF Trigger: GAACGGCGGCGGATCCGCTCAGCCATCCGGGAGCTG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCAGCTCCCGGATGGCTaGGCGGATCCGCCGCCGTTC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSQLPDG*ADPPPF Trigger: GAACGGCGGCGGATCCGCTCAGCCATCCGGGAGCTG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGCCGCCCGCTGGCTGTaGCTGGTGGTGGTCTCCGTG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSAARWL*LVVVSV Trigger: CACGGAGACCACCACCAGGCACAGCCAGCGGGCGGC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGCTGCAGCTCCCGGATaGCTGAGCGGATCCGCCGCC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCAAAPG*LSGSAA Trigger: GGCGGCGGATCCGCTCAGCCATCCGGGAGCTGCAGC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGGGAAGCAGGTGAGCTaGGCCTGCCCCCAGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEGKQVS*ACPQAG Trigger: CCCCGCCTGGGGGCAGGCCCAGCTCACCTGCTTCCC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGGCCGTCAGCTCCTCTaGACTCAGGGGACTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCGRQLL*TQGTPP Trigger: GGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGCC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGTGCTGCCTGCCTCCTaGTGTCCTCTCGGGGGCCAC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSVLPAS*CPLGGH Trigger: GTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCAC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGTGCTGCCTGCCTCCTaGTGTCCTCTCGGGGGCCAC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCVLPAS*CPLGGH Trigger: GTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCAC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGCCGCCCGCTGGCTGTaGCTGGTGGTGGTCTCCGTG | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEAARWL*LVVVSV Trigger: CACGGAGACCACCACCAGGCACAGCCAGCGGGCGGC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGCTGCAGCTCCCGGATaGCTGAGCGGATCCGCCGCC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRAAAPG*LSGSAA Trigger: GGCGGCGGATCCGCTCAGCCATCCGGGAGCTGCAGC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGGGAAGCAGGTGAGCTaGGCCTGCCCCCAGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVGKQVS*ACPQAG Trigger: CCCCGCCTGGGGGCAGGCCCAGCTCACCTGCTTCCC...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCGGGGTGGGCCATCCTaGAGCCTGGCAACCACGGGA | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCRGGPS*SLATTG Trigger: TCCCGTGGTTGCCAGGCTCCAGGATGGCCCACCCCG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGGCCGTCAGCTCCTCTaGACTCAGGGGACTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRGRQLL*TQGTPP Trigger: GGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGCC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGTGCTGCCTGCCTCCTaGTGTCCTCTCGGGGGCCAC | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEVLPAS*CPLGGH Trigger: GTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCAC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCGTAGCCGCGGGTCTTaGCTCGGCACCAGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCRSRGS*LGTSPA Trigger: TGCTGGACTGGTGCCGAGCCAAGACCCGCGGCTACG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGAGGGAAGCAGGTGAGCTaGGCCTGCCCCCAGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: GGVGTAARSAGGVSRVARGKQVS*ACPQAG Trigger: CCCCGCCTGGGGGCAGGCCCAGCTCACCTGCTTCCC...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGCAGCACCCGGCCTGTaGAGGCCTGACCACGGCCAT | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEAAPGL*RPDHGH Trigger: ATGGCCGTGGTCAGGCCTCCACAGGCCGGGTGCTGC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGCAGCACCCGGCCTGTaGAGGCCTGACCACGGCCAT | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRAAPGL*RPDHGH Trigger: ATGGCCGTGGTCAGGCCTCCACAGGCCGGGTGCTGC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGGAGTCCAAGGTATCTaGGGGCTCTGTGGGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCGVQGI*GLCGAR Trigger: CCTGGCCCCACAGAGCCCTCAGATACCTTGGACTCC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTGTTTTCAAGGGACCTaGGAGCCAAGCCCCGCCCCC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCCFQGT*EPSPAP Trigger: GGGGGCGGGGCTTGGCTCTCAGGTCCCTTGAAAACA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCAGCTGTACGGGGTGTaGCAGGACCACCTGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSQLYGV*QDHLQS Trigger: GCTCTGCAGGTGGTCCTGGCACACCCCGTACAGCTG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCAGCTGTACGGGGTGTaGCAGGACCACCTGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCQLYGV*QDHLQS Trigger: GCTCTGCAGGTGGTCCTGGCACACCCCGTACAGCTG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTATCTGAGGGCTCTGTaGGGCCAGGCAGGGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSYLRAL*GQAGAC Trigger: GCAAGCCCCTGCCTGGCCCCACAGAGCCCTCAGATA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTATCTGAGGGCTCTGTaGGGCCAGGCAGGGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCYLRAL*GQAGAC Trigger: GCAAGCCCCTGCCTGGCCCCACAGAGCCCTCAGATA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCTTCATACTGCCCCCTaGCTCCCCAGTGCCAACGGC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSLHTAP*LPSANG Trigger: GCCGTTGGCACTGGGGAGCCAGGGGGCAGTATGAAG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGCTGGCTGTGCCTGGTaGTGGTCTCCGTGGCCACAT | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSAGCAW*WSPWPH Trigger: ATGTGGCCACGGAGACCACCACCAGGCACAGCCAGC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTGGACTCCACTGTGGTaGTGCGGGCCGTCTGAGTGC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSWTPLW*CGPSEC Trigger: GCACTCAGACGGCCCGCACCACCACAGTGGAGTCCA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCAGGCTGCCAGGACGTaGGCTGGTCTGGTCCTCTCG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVQAART*AGLVLS Trigger: CGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGGAGTCCAAGGTATCTaGGGGCTCTGTGGGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRGVQGI*GLCGAR Trigger: CCTGGCCCCACAGAGCCCTCAGATACCTTGGACTCC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTACAGTGGCCAGAGCTaGATCGGCTGCCTGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCYSGQS*IGCLGH Trigger: GTGACCCAGGCAGCCGATGCAGCTCTGGCCACTGTA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTCTGTATCCAGGAGCTaGGGGCAGTCCGCATGGGTC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCSVSRS*GQSAWV Trigger: GACCCATGCGGACTGCCCGCAGCTCCTGGATACAGA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTACTCCACTGTGGTGGTaGGGGCCGTCTGAGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCTPLWW*GPSECH Trigger: ATGGCACTCAGACGGCCCGCACCACCACAGTGGAGT...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCCACTGGCTCTACAGTaGCCAGAGCTGCATCGGCTG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSPLALQ*PELHRL Trigger: CAGCCGATGCAGCTCTGGCCACTGTAGAGCCAGTGG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTTTGGACCGTGGTGGTaGTGGTGCTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCFGPWW*WCCCCC Trigger: GCAGCAGCAGCAGCACCACCACCACCACGGTCCAAA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGCTGCAGCTCCCGGATaGCTGAGCGGATCCGCCGCC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGAAAPG*LSGSAA Trigger: GGCGGCGGATCCGCTCAGCCATCCGGGAGCTGCAGC...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGAAGCAGGTGAGCTaGGCCTGCCCCCAGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWGKQVS*ACPQAG Trigger: CCCCGCCTGGGGGCAGGCCCAGCTCACCTGCTTCCC...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATCCACAGCAGGACACTaGGCTCCAGCAGGCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRSTAGH*APAGSS Trigger: GCTGGAGCCTGCTGGAGCCCAGTGTCCTGCTGTGGA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATATCTGAGGGCTCTGTaGGGCCAGGCAGGGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRYLRAL*GQAGAC Trigger: GCAAGCCCCTGCCTGGCCCCACAGAGCCCTCAGATA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCGGGCGGTGGGGTACTaGGCTCTTCTGAGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVRAVGY*ALLSRA Trigger: AGCCCTGCTCAGAAGAGCCCAGTACCCCACCGCCCG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACAGGCTGCCAGGACGTaGGCTGGTCTGGTCCTCTCG | + |
Preference number: 4 (lower is better) Translates to: GGVGTAARSAGGVSRVARQAART*AGLVLS Trigger: CGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTG...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGCGTGCTTGGGATGCTaGAGTCTTGGGCAGACTCTG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSACLGC*SLGQTL Trigger: CAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGGCGGATGGCAGCTCTaGTCAGCTTGCGCTCCTCAT | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEGGWQL*SACAPH Trigger: ATGAGGAGCGCAAGCTGATCAGAGCTGCCATCCGCC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGAAGTGGCTCAGAGCTaGCTGGAGCCTCCACAGCAG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSREVAQS*LEPPQQ Trigger: CTGCTGTGGAGGCTCCAGTCAGCTCTGAGCCACTTC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGCGATTGCACATAGGTaGAGACGCACTTGGGGTCGG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSAIAHR*RRTWGR Trigger: CCGACCCCAAGTGCGTCTTCACCTATGTGCAATCGC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATCGGAGCTCACGCAGTaGAGCCCGGATGAGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRSELTQ*SPDELP Trigger: AGGAAGCTCATCCGGGCTGCACTGCGTGAGCTCCGA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCAGCTGTACGGGGTGTaGCAGGACCACCTGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVQLYGV*QDHLQS Trigger: GCTCTGCAGGTGGTCCTGGCACACCCCGTACAGCTG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATCTGTATCCAGGAGCTaGGGGCAGTCCGCATGGGTC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRSVSRS*GQSAWV Trigger: GACCCATGCGGACTGCCCGCAGCTCCTGGATACAGA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGTCCAATGTGTGTGCTaGCTGCCTCCTGCTGTCCTC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSVQCVC*LPPAVL Trigger: GAGGACAGCAGGAGGCAGGCAGCACACACATTGGAC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCCCCTGGCTCCCCAGTaGCAACGGCCACGGGCGGTG | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPPLAPQ*QRPRAV Trigger: CACCGCCCGTGGCCGTTGGCACTGGGGAGCCAGGGG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATGGTGCTGCTGCTGCTaGTGCCATTCTCCAAGCGCC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRWCCCC*CHSPSA Trigger: GGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCACCA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTGGTGGTGCTGCTGCTaGTGCTGCCATTCTCCAAGC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSWWCCC*CCHSPS Trigger: GCTTGGAGAATGGCAGCAGCAGCAGCAGCACCACCA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTGGTGGTGGTGCTGCTaGTGCTGCTGCCATTCTCCA | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSWWWCC*CCCHSP Trigger: TGGAGAATGGCAGCAGCAGCAGCAGCACCACCACCA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCCAGCAACAGCTCGCTaGGCTCTAGCTCAGACTCCA | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSPATAR*ALAQTP Trigger: TGGAGTCTGAGCTAGAGCCCAGCGAGCTGTTGCTGG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCTCCTTCGTCCTCAATaGCCGTCAGCTCCTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCLLRPQ*PSAPLH Trigger: GTGCAGAGGAGCTGACGGCCATTGAGGACGAAGGAG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATTTGGACCGTGGTGGTaGTGGTGCTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRFGPWW*WCCCCC Trigger: GCAGCAGCAGCAGCACCACCACCACCACGGTCCAAA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTCTTGGTTTGGACCGTaGTGGTGGTGGTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSSWFGP*WWWCCC Trigger: GCAGCAGCACCACCACCACCACGGTCCAAACCAAGA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTCTTGGTTTGGACCGTaGTGGTGGTGGTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCSWFGP*WWWCCC Trigger: GCAGCAGCACCACCACCACCACGGTCCAAACCAAGA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCTGCTGCTCTGGCTCTaGCACCTTACCAGGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCLLLWL*HLTRVQ Trigger: TTGGACCCTGGTAAGGTGCCAGAGCCAGAGCAGCAG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCTGCTGCTCTGGCTCTaGCACCTTACCAGGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSLLLWL*HLTRVQ Trigger: TTGGACCCTGGTAAGGTGCCAGAGCCAGAGCAGCAG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGGTGTCCTCTGGGGTTaGGGTTGGCTCGAGTACTTC | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSGVLWG*GWLEYF Trigger: GAAGTACTCGAGCCAACCCCAACCCCAGAGGACACC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGGTGTCCTCTGGGGTTaGGGTTGGCTCGAGTACTTC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCGVLWG*GWLEYF Trigger: GAAGTACTCGAGCCAACCCCAACCCCAGAGGACACC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATGGTCACATCCTGGCTaGTGTCCTCTGGGGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRWSHPG*CPLGLG Trigger: CCCCAACCCCAGAGGACACCAGCCAGGATGTGACCA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGGCCATCCTGGAGCCTaGCAACCACGGGAGAATCAG | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEGHPGA*QPRENQ Trigger: CTGATTCTCCCGTGGTTGCCAGGCTCCAGGATGGCC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGCGGGGTGGGCCATCCTaGAGCCTGGCAACCACGGGA | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGRGGPS*SLATTG Trigger: TCCCGTGGTTGCCAGGCTCCAGGATGGCCCACCCCG...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTGGCTGTGCCTGGTaGTGGTCTCCGTGGCCACAT | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVAGCAW*WSPWPH Trigger: ATGTGGCCACGGAGACCACCACCAGGCACAGCCAGC...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGCAGTGCAGCCCGGATaGGCTTCCTCTCCTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRAVQPG*ASSPQS Trigger: ACTTTGAGGAGAGGAAGCTCATCCGGGCTGCACTGC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGCGTGCTTGGGATGCTaGAGTCTTGGGCAGACTCTG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRACLGC*SLGQTL Trigger: CAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCAGCTCCCGGATGGCTaGGCGGATCCGCCGCCGTTC | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLQLPDG*ADPPPF Trigger: GAACGGCGGCGGATCCGCTCAGCCATCCGGGAGCTG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCACAGCTCCCGGATGGCTaGGCGGATCCGCCGCCGTTC | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRAQLPDG*ADPPPF Trigger: GAACGGCGGCGGATCCGCTCAGCCATCCGGGAGCTG...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGGCGGATGGCAGCTCTaGTCAGCTTGCGCTCCTCAT | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVGGWQL*SACAPH Trigger: ATGAGGAGCGCAAGCTGATCAGAGCTGCCATCCGCC...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGCGGCCTGTGGAGGCCTaGCCACGGCCATCCTTGATC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGRPVEA*PRPSLI Trigger: GATCAAGGATGGCCGTGGTCAGGCCTCCACAGGCCG...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCCCCACTGCTGGTGCTaGGAAGGGTTGGGGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCPHCWC*EGLGVP Trigger: GGGCACCCCCAACCCTTCTCAGCACCAGCAGTGGGG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCCCCACTGCTGGTGCTaGGAAGGGTTGGGGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWPHCWC*EGLGVP Trigger: GGGCACCCCCAACCCTTCTCAGCACCAGCAGTGGGG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGACTGAAGGTAGTGACGTaGGTGACACTGCCCAGTCGG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRLKVVT*VTLPSR Trigger: CCGACTGGGCAGTGTCACTCACGTCACTACCTTCAG...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTCTCCAAGCGCCTCATaGAACTGGACTCCACTGTGG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSSPSAS*NWTPLW Trigger: CCACAGTGGAGTCCAGTTTCATGAGGCGCTTGGAGA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAAATGTGTGTGCTGCCTaGCTCCTGCTGTCCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRNVCAA*LLLSSR Trigger: CCGAGAGGACAGCAGGAGGCAGGCAGCACACACATT...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAAGGGTCCAATGTGTGTaGTGCCTGCCTCCTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRRVQCV*CLPPAV Trigger: GACAGCAGGAGGCAGGCAGCACACACATTGGACCCT...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGTCTGCTGTTCCTGCTaGTCTGGCTCTGGCACCTTA | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSVCCSC*SGSGTL Trigger: TAAGGTGCCAGAGCCAGAGCAGCAGGAACAGCAGAC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATGGTGGTGCTGCTGCTaGTGCTGCCATTCTCCAAGC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRWWCCC*CCHSPS Trigger: GCTTGGAGAATGGCAGCAGCAGCAGCAGCACCACCA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGTGGTGGTGCTGCTGCTaGTGCTGCCATTCTCCAAGC | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEWWCCC*CCHSPS Trigger: GCTTGGAGAATGGCAGCAGCAGCAGCAGCACCACCA...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATGGTGGTGGTGCTGCTaGTGCTGCTGCCATTCTCCA | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRWWWCC*CCCHSP Trigger: TGGAGAATGGCAGCAGCAGCAGCAGCACCACCACCA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGGACGTGAGCTGGTCTaGTCCTCTCGGTCGAAGATA | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSGRELV*SSRSKI Trigger: TATCTTCGACCGAGAGGACCAGACCAGCTCACGTCC...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTATGGCCTTGCGTGCTTaGGATGCTGAAGTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCMALRA*DAEVLG Trigger: GCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCAT...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTGGCGTCGGTTTTGTaGGCTCAGCTGCCCATAGTC | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCELASVL*AQLPIV Trigger: GACTATGGGCAGCTGAGCCCACAAAACCGACGCCAG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGACACGCACTTCCAGTCTaGCTCTCGAAGCCGCACCAT | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRHALPV*LSKPHH Trigger: ATGGTGCGGCTTCGAGAGCCAGACTGGAAGTGCGTG...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCTGCAGCTCCCGGATaGCTGAGCGGATCCGCCGCC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPAAAPG*LSGSAA Trigger: GGCGGCGGATCCGCTCAGCCATCCGGGAGCTGCAGC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCGGGGTGGGCCATCCTaGAGCCTGGCAACCACGGGA | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCRGGPS*SLATTG Trigger: TCCCGTGGTTGCCAGGCTCCAGGATGGCCCACCCCG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGCGGGCGGTGGGGTACTaGGCTCTTCTGAGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGRAVGY*ALLSRA Trigger: AGCCCTGCTCAGAAGAGCCCAGTACCCCACCGCCCG...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCCCGCTGGCTGTGCCTaGTGGTGGTCTCCGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCPAGCA*WWSPWP Trigger: TGGCCACGGAGACCACCACCAGGCACAGCCAGCGGG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCCCGCTGGCTGTGCCTaGTGGTGGTCTCCGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWPAGCA*WWSPWP Trigger: TGGCCACGGAGACCACCACCAGGCACAGCCAGCGGG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTGCCTGGGTCACCGCTaGCCGGCCTGCTTCAGCCAC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPCLGHR*PACFSH Trigger: GTGGCTGAAGCAGGCCGGTCAGCGGTGACCCAGGCA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR TCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCAGGCTGCCAGGACGTaGGCTGGTCTGGTCCTCTCG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCQAART*AGLVLS Trigger: CGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCGGCCTGTGGAGGCCTaGCCACGGCCATCCTTGATC | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWRPVEA*PRPSLI Trigger: GATCAAGGATGGCCGTGGTCAGGCCTCCACAGGCCG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCTGAAGGTAGTGACGTaGGTGACACTGCCCAGTCGG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVLKVVT*VTLPSR Trigger: CCGACTGGGCAGTGTCACTCACGTCACTACCTTCAG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAGGCCGTCAGCTCCTCTaGACTCAGGGGACTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRAGRQLL*TQGTPP Trigger: GGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGCC...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGCCGTCAGCTCCTCTaGACTCAGGGGACTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPGRQLL*TQGTPP Trigger: GGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGCC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCCGTTCTGCCAGATCTaGAGTGACCTCCAGCAGTTT | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSPFCQI*SDLQQF Trigger: AAACTGCTGGAGGTCACTGCAGATCTGGCAGAACGG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCCTGCCTCCTaGTGTCCTCTCGGGGGCCAC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPVLPAS*CPLGGH Trigger: GTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCAC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGAATGTGTGTGCTGCCTaGCTCCTGCTGTCCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVNVCAA*LLLSSR Trigger: CCGAGAGGACAGCAGGAGGCAGGCAGCACACACATT...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGATTCTGCTCTCTGGTTaGCTGTGGGCAGCAGCACCC | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVILLSG*LWAAAP Trigger: GGGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAAT...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTGCCGCCCGCTGGCTGTaGCTGGTGGTGGTCTCCGTG | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSAARWL*LVVVSV Trigger: CACGGAGACCACCACCAGGCACAGCCAGCGGGCGGC...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATGCGGGCCGTCTGAGTaGCATCATTGGAGTGAACGA | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRCGPSE*HHWSER Trigger: TCGTTCACTCCAATGATGGCACTCAGACGGCCCGCA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGAACTCCACTGTGGTGGTaGGGGCCGTCTGAGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: GGVGTAARSAGGVSRVARTPLWW*GPSECH Trigger: ATGGCACTCAGACGGCCCGCACCACCACAGTGGAGT...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCACTAAAGGCAGGCGGGTaGGCCACGGGGGTCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRALKAGG*ATGVPA Trigger: TGCTGGGACCCCCGTGGCCCACCCGCCTGCCTTTAG...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTTCTTCTTCTCTGCCTaGCGTCTTTCAAGGGCTGCC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCFFFSA*RLSRAA Trigger: GGCAGCCCTTGAAAGACGCCAGGCAGAGAAGAAGAA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCGTAGCCGCGGGTCTTaGCTCGGCACCAGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWRSRGS*LGTSPA Trigger: TGCTGGACTGGTGCCGAGCCAAGACCCGCGGCTACG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCTGGCGTCGGTTTTGTaGGCTCAGCTGCCCATAGTC | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVLASVL*AQLPIV Trigger: GACTATGGGCAGCTGAGCCCACAAAACCGACGCCAG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGCACGGAAACGTTTaGACGCCAGAGCCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEQHGNV*TPEPPL Trigger: AAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCCTCGACATCATTCATaGACTCCAGTCTCCCTGCCA | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCPRHHS*TPVSLP Trigger: TGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGTCAATTCTGCTCTCTaGTTGCCTGTGGGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEVNSAL*LPVGSS Trigger: GCTGCTGCCCACAGGCAACCAGAGAGCAGAATTGAC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCCCGCTGGCTGTGCCTaGTGGTGGTCTCCGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPPAGCA*WWSPWP Trigger: TGGCCACGGAGACCACCACCAGGCACAGCCAGCGGG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCAGGCTGCCAGGACGTaGGCTGGTCTGGTCCTCTCG | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPQAART*AGLVLS Trigger: CGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCAGCAACATCTGCTTaGTGCTATTGGCGTTGGGGA | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEPATSA*CYWRWG Trigger: TCCCCAACGCCAATAGCATCAAGCAGATGTTGCTGG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTGTTTTCAAGGGACCTaGGAGCCAAGCCCCGCCCCC | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWCFQGT*EPSPAP Trigger: GGGGGCGGGGCTTGGCTCTCAGGTCCCTTGAAAACA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCGGCCTGTGGAGGCCTaGCCACGGCCATCCTTGATC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPRPVEA*PRPSLI Trigger: GATCAAGGATGGCCGTGGTCAGGCCTCCACAGGCCG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCGGCCTGTGGAGGCCTaGCCACGGCCATCCTTGATC | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRRPVEA*PRPSLI Trigger: GATCAAGGATGGCCGTGGTCAGGCCTCCACAGGCCG...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGTCTCCAAGCGCCTCATaGAACTGGACTCCACTGTGG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVSPSAS*NWTPLW Trigger: CCACAGTGGAGTCCAGTTTCATGAGGCGCTTGGAGA...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTGCTGCTGCTGCTGCTaGCATCTCTCTTTCTTTGTC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCCCCCC*HLSFFV Trigger: GACAAAGAAAGAGAGATGGCAGCAGCAGCAGCAGCA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCTCTTTCTTCTTCTCTaGCTGGCGTCTTTCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCLFLLL*LASFKG Trigger: GCCCTTGAAAGACGCCAGGCAGAGAAGAAGAAAGAG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCAGCTGTACGGGGTGTaGCAGGACCACCTGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCQLYGV*QDHLQS Trigger: GCTCTGCAGGTGGTCCTGGCACACCCCGTACAGCTG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTTCTCCTTGTTGTCTTaGCGCTCAGCACGGAAACGT | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCFSLLS*RSARKR Trigger: ACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGTCGAGTACTTCTGTCTaGTGTTCCTGCTGCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCESSTSV*CSCCSG Trigger: GCCAGAGCAGCAGGAACAGCAGACAGAAGTACTCGA...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTTTGGACCGTGGTGGTaGTGGTGCTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGFGPWW*WCCCCC Trigger: GCAGCAGCAGCAGCACCACCACCACCACGGTCCAAA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGGGATGCTGAAGTCTTaGGCAGACTCTGTGCCTTCA | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEGMLKS*ADSVPS Trigger: TGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGATGGCCTTGCGTGCTTaGGATGCTGAAGTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVMALRA*DAEVLG Trigger: GCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCAT...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCGTAGCCGCGGGTCTTaGCTCGGCACCAGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLRSRGS*LGTSPA Trigger: TGCTGGACTGGTGCCGAGCCAAGACCCGCGGCTACG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACTGGCGTCGGTTTTGTaGGCTCAGCTGCCCATAGTC | + |
Preference number: 4 (lower is better) Translates to: GGVGTAARSAGGVSRVARLASVL*AQLPIV Trigger: GACTATGGGCAGCTGAGCCCACAAAACCGACGCCAG...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCTCGACATCATTCATaGACTCCAGTCTCCCTGCCA | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEPRHHS*TPVSLP Trigger: TGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCCACAGCAGGACACTaGGCTCCAGCAGGCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWSTAGH*APAGSS Trigger: GCTGGAGCCTGCTGGAGCCCAGTGTCCTGCTGTGGA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCACGGGCGGTGGGGTACTaGGCTCTTCTGAGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRARAVGY*ALLSRA Trigger: AGCCCTGCTCAGAAGAGCCCAGTACCCCACCGCCCG...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTGCAGCACCCGGCCTGTaGAGGCCTGACCACGGCCAT | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSAAPGL*RPDHGH Trigger: ATGGCCGTGGTCAGGCCTCCACAGGCCGGGTGCTGC...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGTCAATTCTGCTCTCTaGTTGCCTGTGGGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVVNSAL*LPVGSS Trigger: GCTGCTGCCCACAGGCAACCAGAGAGCAGAATTGAC...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGACTCCACTGTGGTaGTGCGGGCCGTCTGAGTGC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCWTPLW*CGPSEC Trigger: GCACTCAGACGGCCCGCACCACCACAGTGGAGTCCA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGAACTGGACTCCACTGTaGTGGTGCGGGCCGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGNWTPL*WCGPSE Trigger: CTCAGACGGCCCGCACCACCACAGTGGAGTCCAGTT...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGCGCAAACGCAGCTCATaGCGCCGCAGGTGGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGRKRSS*RRRWLY Trigger: GTACAACCACCTGCGGCGCCATGAGCTGCGTTTGCG...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
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CDS-3UTR TCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCGAAGTGGCTCAGAGCTaGCTGGAGCCTCCACAGCAG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCEVAQS*LEPPQQ Trigger: CTGCTGTGGAGGCTCCAGTCAGCTCTGAGCCACTTC...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGAGTCCAAGGTATCTaGGGGCTCTGTGGGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLGVQGI*GLCGAR Trigger: CCTGGCCCCACAGAGCCCTCAGATACCTTGGACTCC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGAGTCCAAGGTATCTaGGGGCTCTGTGGGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPGVQGI*GLCGAR Trigger: CCTGGCCCCACAGAGCCCTCAGATACCTTGGACTCC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGTGTTTTCAAGGGACCTaGGAGCCAAGCCCCGCCCCC | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGCFQGT*EPSPAP Trigger: GGGGGCGGGGCTTGGCTCTCAGGTCCCTTGAAAACA...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCGGAGCTCACGCAGTaGAGCCCGGATGAGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWSELTQ*SPDELP Trigger: AGGAAGCTCATCCGGGCTGCACTGCGTGAGCTCCGA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGACTCGGTCGAAGATACTaGCCATCTTTTTGGACGAGG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRLGRRY*PSFWTR Trigger: CCTCGTCCAAAAAGATGGGCAGTATCTTCGACCGAG...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATCTCAATCATGGCCTTaGGTGCTTGGGATGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRSQSWP*VLGMLK Trigger: CTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCCGTTCTGCCAGATCTaGAGTGACCTCCAGCAGTTT | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVPFCQI*SDLQQF Trigger: AAACTGCTGGAGGTCACTGCAGATCTGGCAGAACGG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGTCCAATGTGTGTGCTaGCTGCCTCCTGCTGTCCTC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGVQCVC*LPPAVL Trigger: GAGGACAGCAGGAGGCAGGCAGCACACACATTGGAC...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGAGGGTCCAATGTGTGTaGTGCCTGCCTCCTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGRVQCV*CLPPAV Trigger: GACAGCAGGAGGCAGGCAGCACACACATTGGACCCT...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCACTCCACTGTGGTGGTaGGGGCCGTCTGAGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCTPLWW*GPSECH Trigger: ATGGCACTCAGACGGCCCGCACCACCACAGTGGAGT...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTGCTGCTGCTGCTaGTGCCATTCTCCAAGCGCC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCWCCCC*CHSPSA Trigger: GGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCACCA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGAAAAACTCTTGGTTTaGACCGTGGTGGTGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSREKLLV*TVVVVV Trigger: CACCACCACCACCACGGTCCAAACCAAGAGTTTTTC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTAAGAGGAAAAACTCTTaGTTTGGACCGTGGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCKRKNS*FGPWWW Trigger: CCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTT...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGTTCTTCTTCTCTGCCTaGCGTCTTTCAAGGGCTGCC | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVFFFSA*RLSRAA Trigger: GGCAGCCCTTGAAAGACGCCAGGCAGAGAAGAAGAA...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTAGCTTCTCAATCATaGCCTTGCGTGCTTGGGATG | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCELASQS*PCVLGM Trigger: CATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCACATCCTGGCTaGTGTCCTCTGGGGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCWSHPG*CPLGLG Trigger: CCCCAACCCCAGAGGACACCAGCCAGGATGTGACCA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTGGTCACATCCTGGCTaGTGTCCTCTGGGGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWWSHPG*CPLGLG Trigger: CCCCAACCCCAGAGGACACCAGCCAGGATGTGACCA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCGGCCATCCTGGAGCCTaGCAACCACGGGAGAATCAG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCGHPGA*QPRENQ Trigger: CTGATTCTCCCGTGGTTGCCAGGCTCCAGGATGGCC...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGCTTCATACTGCCCCCTaGCTCCCCAGTGCCAACGGC | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGLHTAP*LPSANG Trigger: GCCGTTGGCACTGGGGAGCCAGGGGGCAGTATGAAG...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGAACTGGACTCCACTGTaGTGGTGCGGGCCGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWNWTPL*WCGPSE Trigger: CTCAGACGGCCCGCACCACCACAGTGGAGTCCAGTT...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAGCTCTTCGGCTGCCTaGGCCACTGGCTCTACAGTG | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRASSSAA*ATGSTV Trigger: CACTGTAGAGCCAGTGGCTCAGGCAGCCGAAGAGCT...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR TCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGCAGTGCAGCCCGGATaGGCTTCCTCTCCTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWAVQPG*ASSPQS Trigger: ACTTTGAGGAGAGGAAGCTCATCCGGGCTGCACTGC...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGCGGATGGCAGCTCTaGTCAGCTTGCGCTCCTCAT | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPGGWQL*SACAPH Trigger: ATGAGGAGCGCAAGCTGATCAGAGCTGCCATCCGCC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGAAGTGGCTCAGAGCTaGCTGGAGCCTCCACAGCAG | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLEVAQS*LEPPQQ Trigger: CTGCTGTGGAGGCTCCAGTCAGCTCTGAGCCACTTC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAGAAGTGGCTCAGAGCTaGCTGGAGCCTCCACAGCAG | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRAEVAQS*LEPPQQ Trigger: CTGCTGTGGAGGCTCCAGTCAGCTCTGAGCCACTTC...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGAGGGCTAGGAGCTTCTaGAGGGTGTGGAAGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWRARSF*RVWKWL Trigger: GAGCCACTTCCACACCCTTCAGAAGCTCCTAGCCCT...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCGGGAGAATCAGATGTaGACTTTTGGACTCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCERENQM*TFGLCL Trigger: GAGACAGAGTCCAAAAGTTCACATCTGATTCTCCCG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCTGAAGGTAGTGACGTaGGTGACACTGCCCAGTCGG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCLKVVT*VTLPSR Trigger: CCGACTGGGCAGTGTCACTCACGTCACTACCTTCAG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCTCAGCACCTCCACCTaGCTGGTCAGTGCATCGAGC | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRLSTST*LVSASS Trigger: GCTCGATGCACTGACCAGGCAGGTGGAGGTGCTGAG...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR GCA 90 bp | ATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCACCCAGCATCCTCAGCTaGCTGGAAGAGGGCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: MSSTSTKGTQSTSIRGAPPSILS*LEEGLG Trigger: CCCGAGGCCCTCTTCCAGGCAGCTGAGGATGCTGGG...TGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR GCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGCCGTCAGCTCCTCTaGACTCAGGGGACTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAAGRQLL*TQGTPP Trigger: GGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGCC...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTCGGAGCTCACGCAGTaGAGCCCGGATGAGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRSELTQ*SPDELP Trigger: AGGAAGCTCATCCGGGCTGCACTGCGTGAGCTCCGA...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCTCGGTCGAAGATACTaGCCATCTTTTTGGACGAGG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVLGRRY*PSFWTR Trigger: CCTCGTCCAAAAAGATGGGCAGTATCTTCGACCGAG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCTCTTTCTTCTTCTCTaGCTGGCGTCTTTCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVLFLLL*LASFKG Trigger: GCCCTTGAAAGACGCCAGGCAGAGAAGAAGAAAGAG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGTCCAGCAACATCTaGTTGATGCTATTGGCGTTG | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEQSSNI*LMLLAL Trigger: CAACGCCAATAGCATCAAGCAGATGTTGCTGGACTG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGACAGTCCAGCAACATCTaGTTGATGCTATTGGCGTTG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRQSSNI*LMLLAL Trigger: CAACGCCAATAGCATCAAGCAGATGTTGCTGGACTG...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCAGGGTCCAATGTGTGTaGTGCCTGCCTCCTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCRVQCV*CLPPAV Trigger: GACAGCAGGAGGCAGGCAGCACACACATTGGACCCT...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGAGGGTCCAATGTGTGTaGTGCCTGCCTCCTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWRVQCV*CLPPAV Trigger: GACAGCAGGAGGCAGGCAGCACACACATTGGACCCT...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGCCCCTGGCTCCCCAGTaGCAACGGCCACGGGCGGTG | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGPLAPQ*QRPRAV Trigger: CACCGCCCGTGGCCGTTGGCACTGGGGAGCCAGGGG...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCATTCTGCTCTCTGGTTaGCTGTGGGCAGCAGCACCC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCILLSG*LWAAAP Trigger: GGGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAAT...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTGCGGGCCGTCTGAGTaGCATCATTGGAGTGAACGA | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGCGPSE*HHWSER Trigger: TCGTTCACTCCAATGATGGCACTCAGACGGCCCGCA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGACTCCACTGTGGTGGTaGGGGCCGTCTGAGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRTPLWW*GPSECH Trigger: ATGGCACTCAGACGGCCCGCACCACCACAGTGGAGT...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGTTTGGACCGTGGTGGTaGTGGTGCTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLFGPWW*WCCCCC Trigger: GCAGCAGCAGCAGCACCACCACCACCACGGTCCAAA...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGAAAAACTCTTGGTTTaGACCGTGGTGGTGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVEKLLV*TVVVVV Trigger: CACCACCACCACCACGGTCCAAACCAAGAGTTTTTC...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGAAGAGGAAAAACTCTTaGTTTGGACCGTGGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEKRKNS*FGPWWW Trigger: CCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTT...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAAAGAGGAAAAACTCTTaGTTTGGACCGTGGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: AGAGGVGTAARSAGGVSRKRKNS*FGPWWW Trigger: CCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTT...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGGACGTGAGCTGGTCTaGTCCTCTCGGTCGAAGATA | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGGRELV*SSRSKI Trigger: TATCTTCGACCGAGAGGACCAGACCAGCTCACGTCC...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGATGGCCTTGCGTGCTTaGGATGCTGAAGTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGMALRA*DAEVLG Trigger: GCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCAT...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCACGCACTTCCAGTCTaGCTCTCGAAGCCGCACCAT | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCHALPV*LSKPHH Trigger: ATGGTGCGGCTTCGAGAGCCAGACTGGAAGTGCGTG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGCAGGAGTGTCACTGTaGTCACATCCTGGCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGAGVSL*SHPGWC Trigger: ACACCAGCCAGGATGTGACCACAGTGACACTCCTGC...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCTGGTGGGTGAATTGTaGGGGGAAGCAGGTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCLVGEL*GEAGEL Trigger: CAGCTCACCTGCTTCCCCCCACAATTCACCCACCAG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGGCCATCCTGGAGCCTaGCAACCACGGGAGAATCAG | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRGHPGA*QPRENQ Trigger: CTGATTCTCCCGTGGTTGCCAGGCTCCAGGATGGCC...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGCCATCCTGGAGCCTaGCAACCACGGGAGAATCAG | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLGHPGA*QPRENQ Trigger: CTGATTCTCCCGTGGTTGCCAGGCTCCAGGATGGCC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTCGGGGTGGGCCATCCTaGAGCCTGGCAACCACGGGA | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCRGGPS*SLATTG Trigger: TCCCGTGGTTGCCAGGCTCCAGGATGGCCCACCCCG...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGTCAATTCTGCTCTCTaGTTGCCTGTGGGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGVNSAL*LPVGSS Trigger: GCTGCTGCCCACAGGCAACCAGAGAGCAGAATTGAC...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTGCTGGCTGTGCCTGGTaGTGGTCTCCGTGGCCACAT | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSAGCAW*WSPWPH Trigger: ATGTGGCCACGGAGACCACCACCAGGCACAGCCAGC...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCACCCGCTGGCTGTGCCTaGTGGTGGTCTCCGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAAPAGCA*WWSPWP Trigger: TGGCCACGGAGACCACCACCAGGCACAGCCAGCGGG...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTCATGGCGCCGCAGGTaGTTGTACAGCGATTGCACA | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGSWRRR*LYSDCT Trigger: TGTGCAATCGCTGTACAACCACCTGCGGCGCCATGA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCGCAAACGCAGCTCATaGCGCCGCAGGTGGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPRKRSS*RRRWLY Trigger: GTACAACCACCTGCGGCGCCATGAGCTGCGTTTGCG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
||
CDS-3UTR TCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCGTGCTTGGGATGCTaGAGTCTTGGGCAGACTCTG | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLACLGC*SLGQTL Trigger: CAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGAGGGCTAGGAGCTTCTaGAGGGTGTGGAAGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPRARSF*RVWKWL Trigger: GAGCCACTTCCACACCCTTCAGAAGCTCCTAGCCCT...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCACTGCTGGTGCTaGGAAGGGTTGGGGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGPHCWC*EGLGVP Trigger: GGGCACCCCCAACCCTTCTCAGCACCAGCAGTGGGG...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCACTGAAGGTAGTGACGTaGGTGACACTGCCCAGTCGG | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRALKVVT*VTLPSR Trigger: CCGACTGGGCAGTGTCACTCACGTCACTACCTTCAG...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTCTCCAAGCGCCTCATaGAACTGGACTCCACTGTGG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCSPSAS*NWTPLW Trigger: CCACAGTGGAGTCCAGTTTCATGAGGCGCTTGGAGA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCGATTGCACATAGGTaGAGACGCACTTGGGGTCGG | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLAIAHR*RRTWGR Trigger: CCGACCCCAAGTGCGTCTTCACCTATGTGCAATCGC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
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CDS-3UTR GCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTCACCTGCCTGGTCAGTaGATCGAGCCGCCGGCTCAG | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCHLPGQ*IEPPAQ Trigger: CTGAGCCGGCGGCTCGATGCACTGACCAGGCAGGTG...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR GCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTCGGAGCTCACGCAGTaGAGCCCGGATGAGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSSELTQ*SPDELP Trigger: AGGAAGCTCATCCGGGCTGCACTGCGTGAGCTCCGA...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCAGTCCAGCAACATCTaGTTGATGCTATTGGCGTTG | + |
Preference number: 4 (lower is better) Translates to: GAGGVGTAARSAGGVSRVQSSNI*LMLLAL Trigger: CAACGCCAATAGCATCAAGCAGATGTTGCTGGACTG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCCAATGTGTGTGCTaGCTGCCTCCTGCTGTCCTC | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLVQCVC*LPPAVL Trigger: GAGGACAGCAGGAGGCAGGCAGCACACACATTGGAC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGATTCTGCTCTCTGGTTaGCTGTGGGCAGCAGCACCC | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRILLSG*LWAAAP Trigger: GGGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAAT...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGTGCTGCTGCTGCTGCTaGCATTCTCCAAGCGCCTCA | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGCCCCC*HSPSAS Trigger: TGAGGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCA...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTGCTGCTGCTGCTGCTaGCATTCTCCAAGCGCCTCA | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPCCCCC*HSPSAS Trigger: TGAGGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCTGCTGCTGCTaGCATTCTCCAAGCGCCTCA | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRCCCCC*HSPSAS Trigger: TGAGGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCA...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTGGTGGTGGTGCTGCTaGTGCTGCTGCCATTCTCCA | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPWWWCC*CCCHSP Trigger: TGGAGAATGGCAGCAGCAGCAGCAGCACCACCACCA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAGGGCTCTGCAGGATCTaGCTCCATGAGACTGCTCCT | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRAGLCRI*LHETAP Trigger: AGGAGCAGTCTCATGGAGCCAGATCCTGCAGAGCCC...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCTCCTTCGTCCTCAATaGCCGTCAGCTCCTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPLLRPQ*PSAPLH Trigger: GTGCAGAGGAGCTGACGGCCATTGAGGACGAAGGAG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCTCCTTCGTCCTCAATaGCCGTCAGCTCCTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLLLRPQ*PSAPLH Trigger: GTGCAGAGGAGCTGACGGCCATTGAGGACGAAGGAG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTCTTGGTTTGGACCGTaGTGGTGGTGGTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRSWFGP*WWWCCC Trigger: GCAGCAGCACCACCACCACCACGGTCCAAACCAAGA...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCGGACGTGAGCTGGTCTaGTCCTCTCGGTCGAAGATA | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCGRELV*SSRSKI Trigger: TATCTTCGACCGAGAGGACCAGACCAGCTCACGTCC...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCACGTAGCCGCGGGTCTTaGCTCGGCACCAGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAARSRGS*LGTSPA Trigger: TGCTGGACTGGTGCCGAGCCAAGACCCGCGGCTACG...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCTGGCGTCGGTTTTGTaGGCTCAGCTGCCCATAGTC | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLLASVL*AQLPIV Trigger: GACTATGGGCAGCTGAGCCCACAAAACCGACGCCAG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCAGCACGGAAACGTTTaGACGCCAGAGCCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCQHGNV*TPEPPL Trigger: AAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCTGCTGCTCTGGCTCTaGCACCTTACCAGGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLLLLWL*HLTRVQ Trigger: TTGGACCCTGGTAAGGTGCCAGAGCCAGAGCAGCAG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGGTGTCCTCTGGGGTTaGGGTTGGCTCGAGTACTTC | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRGVLWG*GWLEYF Trigger: GAAGTACTCGAGCCAACCCCAACCCCAGAGGACACC...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCTGGTGGGTGAATTGTaGGGGGAAGCAGGTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLLVGEL*GEAGEL Trigger: CAGCTCACCTGCTTCCCCCCACAATTCACCCACCAG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCTGGTGGGTGAATTGTaGGGGGAAGCAGGTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPLVGEL*GEAGEL Trigger: CAGCTCACCTGCTTCCCCCCACAATTCACCCACCAG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTCAGATGTGAACTTTTaGACTCTGTCTCTCACAGAG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVGTAARSAGGVSSDVNF*TLSLTE Trigger: CTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCGTCAATTCTGCTCTCTaGTTGCCTGTGGGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCVNSAL*LPVGSS Trigger: GCTGCTGCCCACAGGCAACCAGAGAGCAGAATTGAC...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | ATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAGCTGGCTGTGCCTGGTaGTGGTCTCCGTGGCCACAT | + |
Preference number: 4 (lower is better) Translates to: MSSTSTKGTQSTSIRGAPAGCAW*WSPWPH Trigger: ATGTGGCCACGGAGACCACCACCAGGCACAGCCAGC...TGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTGCGTGCTTGGGATGCTaGAGTCTTGGGCAGACTCTG | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSACLGC*SLGQTL Trigger: CAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGC...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGCCCCACTGCTGGTGCTaGGAAGGGTTGGGGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGPHCWC*EGLGVP Trigger: GGGCACCCCCAACCCTTCTCAGCACCAGCAGTGGGG...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGTCTCCAAGCGCCTCATaGAACTGGACTCCACTGTGG | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGSPSAS*NWTPLW Trigger: CCACAGTGGAGTCCAGTTTCATGAGGCGCTTGGAGA...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGCTCGGTCGAAGATACTaGCCATCTTTTTGGACGAGG | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGLGRRY*PSFWTR Trigger: CCTCGTCCAAAAAGATGGGCAGTATCTTCGACCGAG...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTCAGCTGTACGGGGTGTaGCAGGACCACCTGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCQLYGV*QDHLQS Trigger: GCTCTGCAGGTGGTCCTGGCACACCCCGTACAGCTG...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTTCTCCTTGTTGTCTTaGCGCTCAGCACGGAAACGT | + |
Preference number: 4 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGFSLLS*RSARKR Trigger: ACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTAATGTGTGTGCTGCCTaGCTCCTGCTGTCCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSNVCAA*LLLSSR Trigger: CCGAGAGGACAGCAGGAGGCAGGCAGCACACACATT...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGGTCTGCTGTTCCTGCTaGTCTGGCTCTGGCACCTTA | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGVCCSC*SGSGTL Trigger: TAAGGTGCCAGAGCCAGAGCAGCAGGAACAGCAGAC...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTCTGCTGTTCCTGCTaGTCTGGCTCTGGCACCTTA | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPVCCSC*SGSGTL Trigger: TAAGGTGCCAGAGCCAGAGCAGCAGGAACAGCAGAC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCTGCTGTTCCTGCTaGTCTGGCTCTGGCACCTTA | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLVCCSC*SGSGTL Trigger: TAAGGTGCCAGAGCCAGAGCAGCAGGAACAGCAGAC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCGAGTACTTCTGTCTaGTGTTCCTGCTGCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWSSTSV*CSCCSG Trigger: GCCAGAGCAGCAGGAACAGCAGACAGAAGTACTCGA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGAAAGAGGAAAAACTCTTaGTTTGGACCGTGGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: GGVGTAARSAGGVSRVARKRKNS*FGPWWW Trigger: CCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTT...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGGACGTGAGCTGGTCTaGTCCTCTCGGTCGAAGATA | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRGRELV*SSRSKI Trigger: TATCTTCGACCGAGAGGACCAGACCAGCTCACGTCC...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTTCTTCTTCTCTGCCTaGCGTCTTTCAAGGGCTGCC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCFFFSA*RLSRAA Trigger: GGCAGCCCTTGAAAGACGCCAGGCAGAGAAGAAGAA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGATGCTGAAGTCTTaGGCAGACTCTGTGCCTTCA | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWGMLKS*ADSVPS Trigger: TGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCC...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCGTAGCCGCGGGTCTTaGCTCGGCACCAGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGRSRGS*LGTSPA Trigger: TGCTGGACTGGTGCCGAGCCAAGACCCGCGGCTACG...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTCACGCACTTCCAGTCTaGCTCTCGAAGCCGCACCAT | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSHALPV*LSKPHH Trigger: ATGGTGCGGCTTCGAGAGCCAGACTGGAAGTGCGTG...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCAGCACGGAAACGTTTaGACGCCAGAGCCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRQHGNV*TPEPPL Trigger: AAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTG...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCAGGAGTGTCACTGTaGTCACATCCTGGCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLAGVSL*SHPGWC Trigger: ACACCAGCCAGGATGTGACCACAGTGACACTCCTGC...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAGCAGGAGTGTCACTGTaGTCACATCCTGGCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: AARSAGGVSRVARHSCRAAGVSL*SHPGWC Trigger: ACACCAGCCAGGATGTGACCACAGTGACACTCCTGC...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCGGGCGGTGGGGTACTaGGCTCTTCTGAGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGRAVGY*ALLSRA Trigger: AGCCCTGCTCAGAAGAGCCCAGTACCCCACCGCCCG...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTTGGACTCCACTGTGGTaGTGCGGGCCGTCTGAGTGC | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCWTPLW*CGPSEC Trigger: GCACTCAGACGGCCCGCACCACCACAGTGGAGTCCA...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTCATGGCGCCGCAGGTaGTTGTACAGCGATTGCACA | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPSWRRR*LYSDCT Trigger: TGTGCAATCGCTGTACAACCACCTGCGGCGCCATGA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCAGCATCTTCCAGTCTaGCTCTCGAAGCCGCACCAT | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRQHLPV*LSKPHH Trigger: ATGGTGCGGCTTCGAGAGCCAGACTGGAAGATGCTG...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110011.8 |
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CDS-3UTR TCA 90 bp | ATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAGCGTGCTTGGGATGCTaGAGTCTTGGGCAGACTCTG | + |
Preference number: 4 (lower is better) Translates to: MSSTSTKGTQSTSIRGAPACLGC*SLGQTL Trigger: CAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGC...TGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCCAGCAACATCTGCTTaGTGCTATTGGCGTTGGGGA | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPPATSA*CYWRWG Trigger: TCCCCAACGCCAATAGCATCAAGCAGATGTTGCTGG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCCAGCAACATCTGCTTaGTGCTATTGGCGTTGGGGA | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLPATSA*CYWRWG Trigger: TCCCCAACGCCAATAGCATCAAGCAGATGTTGCTGG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCTCGGTCGAAGATACTaGCCATCTTTTTGGACGAGG | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWLGRRY*PSFWTR Trigger: CCTCGTCCAAAAAGATGGGCAGTATCTTCGACCGAG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCTCTTTCTTCTTCTCTaGCTGGCGTCTTTCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCLFLLL*LASFKG Trigger: GCCCTTGAAAGACGCCAGGCAGAGAAGAAGAAAGAG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCTCAATCATGGCCTTaGGTGCTTGGGATGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWSQSWP*VLGMLK Trigger: CTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTCTCAATCATGGCCTTaGGTGCTTGGGATGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCSQSWP*VLGMLK Trigger: CTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCATCTGTATCCAGGAGCTaGGGGCAGTCCGCATGGGTC | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAASVSRS*GQSAWV Trigger: GACCCATGCGGACTGCCCGCAGCTCCTGGATACAGA...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTTCTGTATCCAGGAGCTaGGGGCAGTCCGCATGGGTC | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCSVSRS*GQSAWV Trigger: GACCCATGCGGACTGCCCGCAGCTCCTGGATACAGA...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCCGTTCTGCCAGATCTaGAGTGACCTCCAGCAGTTT | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRPFCQI*SDLQQF Trigger: AAACTGCTGGAGGTCACTGCAGATCTGGCAGAACGG...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTTCTCCTTGTTGTCTTaGCGCTCAGCACGGAAACGT | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCFSLLS*RSARKR Trigger: ACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCGGGCCGTCTGAGTaGCATCATTGGAGTGAACGA | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSCGPSE*HHWSER Trigger: TCGTTCACTCCAATGATGGCACTCAGACGGCCCGCA...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCACCTCCACCTGCCTaGTCAGTGCATCGAGCCGCC | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGAPPPA*SVHRAA Trigger: GGCGGCTCGATGCACTGACCAGGCAGGTGGAGGTGC...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTGGACGTGAGCTGGTCTaGTCCTCTCGGTCGAAGATA | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSGRELV*SSRSKI Trigger: TATCTTCGACCGAGAGGACCAGACCAGCTCACGTCC...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTTCTTCTTCTCTGCCTaGCGTCTTTCAAGGGCTGCC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPFFFSA*RLSRAA Trigger: GGCAGCCCTTGAAAGACGCCAGGCAGAGAAGAAGAA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTTCTTCTTCTCTGCCTaGCGTCTTTCAAGGGCTGCC | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRFFFSA*RLSRAA Trigger: GGCAGCCCTTGAAAGACGCCAGGCAGAGAAGAAGAA...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGGGATGCTGAAGTCTTaGGCAGACTCTGTGCCTTCA | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRGMLKS*ADSVPS Trigger: TGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCC...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGGATGCTGAAGTCTTaGGCAGACTCTGTGCCTTCA | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPGMLKS*ADSVPS Trigger: TGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTATGGCCTTGCGTGCTTaGGATGCTGAAGTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSMALRA*DAEVLG Trigger: GCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCAT...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCTAGCTTCTCAATCATaGCCTTGCGTGCTTGGGATG | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWLASQS*PCVLGM Trigger: CATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCCTAGCTTCTCAATCATaGCCTTGCGTGCTTGGGATG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCLASQS*PCVLGM Trigger: CATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAG...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTCAGCACGGAAACGTTTaGACGCCAGAGCCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSQHGNV*TPEPPL Trigger: AAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTG...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCCTCGACATCATTCATaGACTCCAGTCTCCCTGCCA | + |
Preference number: 4 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRPRHHS*TPVSLP Trigger: TGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGG...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTTGGTCACATCCTGGCTaGTGTCCTCTGGGGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCWSHPG*CPLGLG Trigger: CCCCAACCCCAGAGGACACCAGCCAGGATGTGACCA...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAAACTGGACTCCACTGTaGTGGTGCGGGCCGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAANWTPL*WCGPSE Trigger: CTCAGACGGCCCGCACCACCACAGTGGAGTCCAGTT...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAAGGGCTAGGAGCTTCTaGAGGGTGTGGAAGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAARARSF*RVWKWL Trigger: GAGCCACTTCCACACCCTTCAGAAGCTCCTAGCCCT...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTCTCTGCGCCATTAGCTaGTTCCACTGTGGTGGAGGG | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCLCAIS*FHCGGG Trigger: CCCTCCACCACAGTGGAAGCAGCTAATGGCGCAGAG...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGTGGTGCTGCTGCTGCTaGTGCCATCTCTCTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGWCCCC*CHLSFF Trigger: AAAGAAAGAGAGATGGCAGCAGCAGCAGCAGCACCA...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
||
CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCTCGGTCGAAGATACTaGCCATCTTTTTGGACGAGG | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPLGRRY*PSFWTR Trigger: CCTCGTCCAAAAAGATGGGCAGTATCTTCGACCGAG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTCTCAATCATGGCCTTaGGTGCTTGGGATGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPSQSWP*VLGMLK Trigger: CTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGTTCTCCTTGTTGTCTTaGCGCTCAGCACGGAAACGT | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGFSLLS*RSARKR Trigger: ACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAA...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGGAAAAACTCTTGGTTTaGACCGTGGTGGTGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: PPPPRVHSPPASVGPQAGEKLLV*TVVVVV Trigger: CACCACCACCACCACGGTCCAAACCAAGAGTTTTTC...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGCTAGCTTCTCAATCATaGCCTTGCGTGCTTGGGATG | + |
Preference number: 4 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLLASQS*PCVLGM Trigger: CATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAG...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGTCCACAGCAGGACACTaGGCTCCAGCAGGCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGSTAGH*APAGSS Trigger: GCTGGAGCCTGCTGGAGCCCAGTGTCCTGCTGTGGA...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGCTTCATACTGCCCCCTaGCTCCCCAGTGCCAACGGC | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGLHTAP*LPSANG Trigger: GCCGTTGGCACTGGGGAGCCAGGGGGCAGTATGAAG...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCAGGATCTGGCTCCATaGGACTGCTCCTTCGAGAGG | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGQDLAP*DCSFER Trigger: CCTCTCGAAGGAGCAGTCTCATGGAGCCAGATCCTG...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR TCA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCGGGAGAATCAGATGTaGACTTTTGGACTCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPRENQM*TFGLCL Trigger: GAGACAGAGTCCAAAAGTTCACATCTGATTCTCCCG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCATGGTGGTGCTGCTGCTaGTGCTGCCATCTCTCTTTC | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAAWWCCC*CCHLSF Trigger: GAAAGAGAGATGGCAGCAGCAGCAGCAGCACCACCA...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR GCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTCTCTTTCTTCTTCTCTaGCTGGCGTCTTTCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSLFLLL*LASFKG Trigger: GCCCTTGAAAGACGCCAGGCAGAGAAGAAGAAAGAG...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGTGGTGCTGCTGCTGCTaGTGCCATTCTCCAAGCGCC | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGWCCCC*CHSPSA Trigger: GGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCACCA...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTCTAGCTTCTCAATCATaGCCTTGCGTGCTTGGGATG | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSLASQS*PCVLGM Trigger: CATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAG...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | ATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCACCTCGACATCATTCATaGACTCCAGTCTCCCTGCCA | + |
Preference number: 4 (lower is better) Translates to: MSSTSTKGTQSTSIRGAPPRHHS*TPVSLP Trigger: TGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGG...TGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR TCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCACCAGCAACATCTGCTTaGTGCTATTGGCGTTGGGGA | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAAPATSA*CYWRWG Trigger: TCCCCAACGCCAATAGCATCAAGCAGATGTTGCTGG...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | ATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCACTCTTTCTTCTTCTCTaGCTGGCGTCTTTCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: MSSTSTKGTQSTSIRGAPLFLLL*LASFKG Trigger: GCCCTTGAAAGACGCCAGGCAGAGAAGAAGAAAGAG...TGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTCAGTCCAGCAACATCTaGTTGATGCTATTGGCGTTG | + |
Preference number: 4 (lower is better) Translates to: VGTAARSAGGVSRVARHSQSSNI*LMLLAL Trigger: CAACGCCAATAGCATCAAGCAGATGTTGCTGGACTG...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCACCGTTCTGCCAGATCTaGAGTGACCTCCAGCAGTTT | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAAPFCQI*SDLQQF Trigger: AAACTGCTGGAGGTCACTGCAGATCTGGCAGAACGG...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCATCGAGTACTTCTGTCTaGTGTTCCTGCTGCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAASSTSV*CSCCSG Trigger: GCCAGAGCAGCAGGAACAGCAGACAGAAGTACTCGA...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGATTCTGCTCTCTGGTTaGCTGTGGGCAGCAGCACCC | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGILLSG*LWAAAP Trigger: GGGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAAT...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGTGCTGCTGCTGCTGCTaGCATTCTCCAAGCGCCTCA | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGCCCCC*HSPSAS Trigger: TGAGGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCA...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGCTCCTTCGTCCTCAATaGCCGTCAGCTCCTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGLLRPQ*PSAPLH Trigger: GTGCAGAGGAGCTGACGGCCATTGAGGACGAAGGAG...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGGCAGGAGTGTCACTGTaGTCACATCCTGGCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGAGVSL*SHPGWC Trigger: ACACCAGCCAGGATGTGACCACAGTGACACTCCTGC...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCAGATGTGAACTTTTaGACTCTGTCTCTCACAGAG | + |
Preference number: 4 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWSDVNF*TLSLTE Trigger: CTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTCAGATGTGAACTTTTaGACTCTGTCTCTCACAGAG | + |
Preference number: 4 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCSDVNF*TLSLTE Trigger: CTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGTCGAGTACTTCTGTCTaGTGTTCCTGCTGCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGSSTSV*CSCCSG Trigger: GCCAGAGCAGCAGGAACAGCAGACAGAAGTACTCGA...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGTCTCAATCATGGCCTTaGGTGCTTGGGATGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGSQSWP*VLGMLK Trigger: CTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGA...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR GCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCACAGTCCAGCAACATCTaGTTGATGCTATTGGCGTTG | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAAQSSNI*LMLLAL Trigger: CAACGCCAATAGCATCAAGCAGATGTTGCTGGACTG...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGGAAAAACTCTTGGTTTaGACCGTGGTGGTGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: SSCPPPPPRVHSPPASVGEKLLV*TVVVVV Trigger: CACCACCACCACCACGGTCCAAACCAAGAGTTTTTC...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTTCAGATGTGAACTTTTaGACTCTGTCTCTCACAGAG | + |
Preference number: 4 (lower is better) Translates to: VARHSCRANAAHGAAGGCSDVNF*TLSLTE Trigger: CTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGA...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CCA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAAGTTCTTGTAATGCCTaGCTCAACTGTTCTTCAAAG | + |
Preference number: 4 (lower is better) Translates to: VSRVARHSCRANAAHGAASSCNA*LNCSSK Trigger: CTTTGAAGAACAGTTGAGCCAGGCATTACAAGAACT...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 90 bp | CAGCCGCCCGCTGGCTGTGCCTGGTGGTGGTCTCCGTGGCCACATTaGTTCGGCTCTCGCCCGGCCGGGCCCGTGCCTCCCGTAGCCTCC | + |
Preference number: 5 (lower is better) Translates to: QPPAGCAWWWSPWPH*FGSRPAGPVPPVAS Trigger: GGAGGCTACGGGAGGCACGGGCCCGGCCGGGCGAGAGCCGAAGCAATGTGGCCACGGAGACCACCACCAGGCACAGCCAGCGGGCGGCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCGCCCCTCTGGGCCTTaGTCCACTCGAGCCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCRPSGP*STRACS Trigger: AGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCCCAGGGCCCTCCTCTaGAGGGCAGCTCTGAAGCTC | + |
Preference number: 5 (lower is better) Translates to: GAGAGGVGTAARSAGGVSPRALL*RAALKL Trigger: GAGCTTCAGAGCTGCCCTCAAGAGGAGGGCCCTGGG...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTCCCAGGGCCCTCCTCTaGAGGGCAGCTCTGAAGCTC | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCPRALL*RAALKL Trigger: GAGCTTCAGAGCTGCCCTCAAGAGGAGGGCCCTGGG...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGACCCAGGGCCCTCCTCTaGAGGGCAGCTCTGAAGCTC | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRPRALL*RAALKL Trigger: GAGCTTCAGAGCTGCCCTCAAGAGGAGGGCCCTGGG...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCCCAGGGCCCTCCTCTaGAGGGCAGCTCTGAAGCTC | + |
Preference number: 5 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEPRALL*RAALKL Trigger: GAGCTTCAGAGCTGCCCTCAAGAGGAGGGCCCTGGG...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCGCCCCTCTGGGCCTTaGTCCACTCGAGCCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVRPSGP*STRACS Trigger: AGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGTCTGGTCCAGCATCTaGTCCAGGACTCCTTCGTCC | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCVWSSI*SRTPSS Trigger: GGACGAAGGAGTCCTGGACAAGATGCTGGACCAGAC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGTTCTGGCGTCGGTTTaGTGGGCTCAGCTGCCCATA | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCVLASV*WAQLPI Trigger: TATGGGCAGCTGAGCCCACAAAACCGACGCCAGAAC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTAATTCTGCTCTCTGGTaGCCTGTGGGCAGCAGCACC | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCNSALW*PVGSST Trigger: GGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAATT...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATGGGTGATGGTGTTCTaGCCCCCACTGCTGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRWVMVF*PPLLVL Trigger: CAGCACCAGCAGTGGGGGCAAGAACACCATCACCCA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGTCTGGTCCAGCATCTaGTCCAGGACTCCTTCGTCC | + |
Preference number: 5 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEVWSSI*SRTPSS Trigger: GGACGAAGGAGTCCTGGACAAGATGCTGGACCAGAC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGTTCTGGCGTCGGTTTaGTGGGCTCAGCTGCCCATA | + |
Preference number: 5 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEVLASV*WAQLPI Trigger: TATGGGCAGCTGAGCCCACAAAACCGACGCCAGAAC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTTCTGGCGTCGGTTTaGTGGGCTCAGCTGCCCATA | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRVLASV*WAQLPI Trigger: TATGGGCAGCTGAGCCCACAAAACCGACGCCAGAAC...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGTTCTCCTTGTTGTCTaGCCGCTCAGCACGGAAACG | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCVLLVV*PLSTET Trigger: CGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAAC...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGAGCCAGTTCTCCTTGTaGTCTTGCCGCTCAGCACGG | + |
Preference number: 5 (lower is better) Translates to: RCRCWGRGDSSPQRRRCESQFSL*SCRSAR Trigger: CCGTGCTGAGCGGCAAGACAACAAGGAGAACTGGCT...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGTGGTGTCCTCTGGGGTaGGGGTTGGCTCGAGTACTT | + |
Preference number: 5 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEWCPLG*GLARVL Trigger: AAGTACTCGAGCCAACCCCAACCCCAGAGGACACCA...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTCGATTTGGGGTTGGTaGTCGGGGACTGAGCACAGA | + |
Preference number: 5 (lower is better) Translates to: GAGAGGVGTAARSAGGVSSIWGW*SGTEHR Trigger: TCTGTGCTCAGTCCCCGACAACCAACCCCAAATCGA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAAATTCTGCTCTCTGGTaGCCTGTGGGCAGCAGCACC | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRNSALW*PVGSST Trigger: GGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAATT...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 90 bp | GGTGGTGCTGATGAGGGAAGGGCCCGGGAGCCTTGTGGGGGTCGGTaGAGCAAGGGCTGTTCGGGGTGGGCCATCCTGGAGCCTGGCAAC | + |
Preference number: 5 (lower is better) Translates to: GGADEGRAREPCGGR*SKGCSGWAILEPGN Trigger: GTTGCCAGGCTCCAGGATGGCCCACCCCGAACAGCCCTTGCTTCACCGACCCCCACAAGGCTCCCGGGCCCTTCCCTCATCAGCACCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCGCCCCTCTGGGCCTTaGTCCACTCGAGCCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWRPSGP*STRACS Trigger: AGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCATCTGCTTGATGCTATaGGCGTTGGGGACTCCGAAG | + |
Preference number: 5 (lower is better) Translates to: GAGAGGVGTAARSAGGVSICLML*ALGTPK Trigger: CTTCGGAGTCCCCAACGCCAATAGCATCAAGCAGAT...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTATCTGCTTGATGCTATaGGCGTTGGGGACTCCGAAG | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCICLML*ALGTPK Trigger: CTTCGGAGTCCCCAACGCCAATAGCATCAAGCAGAT...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCTCCAGCAACATCTGCTaGATGCTATTGGCGTTGGGG | + |
Preference number: 5 (lower is better) Translates to: GAGAGGVGTAARSAGGVSSSNIC*MLLALG Trigger: CCCCAACGCCAATAGCATCAAGCAGATGTTGCTGGA...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGTTCTGGCGTCGGTTTaGTGGGCTCAGCTGCCCATA | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVVLASV*WAQLPI Trigger: TATGGGCAGCTGAGCCCACAAAACCGACGCCAGAAC...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGTCAGCACGGAAACGTTaGGACGCCAGAGCCTCCTCT | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVSARKR*DARASS Trigger: AGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGA...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGAGCCAGTTCTCCTTGTaGTCTTGCCGCTCAGCACGG | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVSQFSL*SCRSAR Trigger: CCGTGCTGAGCGGCAAGACAACAAGGAGAACTGGCT...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGGCAGCTCTGATCAGCTaGCGCTCCTCATATTCACCG | + |
Preference number: 5 (lower is better) Translates to: RCRCWGRGDSSPQRRRCEAALIS*RSSYSP Trigger: CGGTGAATATGAGGAGCGCAAGCTGATCAGAGCTGC...CTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 90 bp | CGCCGGCTCAGAGCTGCCGTCTCTGCTCGAAGCTCTTCGGCTGCCTaGGCCACTGGCTCTACAGTGGCCAGAGCTGCATCGGCTGCCTGG | + |
Preference number: 5 (lower is better) Translates to: RRLRAAVSARSSSAA*ATGSTVARAASAAW Trigger: CCAGGCAGCCGATGCAGCTCTGGCCACTGTAGAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCTGAGCCGGCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 90 bp | GAGCCGCCGGCTCAGAGCTGCCGTCTCTGCTCGAAGCTCTTCGGCTaGCTGAGCCACTGGCTCTACAGTGGCCAGAGCTGCATCGGCTGC | + |
Preference number: 5 (lower is better) Translates to: EPPAQSCRLCSKLFG*LSHWLYSGQSCIGC Trigger: GCAGCCGATGCAGCTCTGGCCACTGTAGAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCTGAGCCGGCGGCTC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 90 bp | CACCTCCACCTGCCTGGTCAGTGCATCGAGCCGCCGGCTCAGAGCTaGCGTCTCTGCTCGAAGCTCTTCGGCTGCCTGAGCCACTGGCTC | + |
Preference number: 5 (lower is better) Translates to: HLHLPGQCIEPPAQS*RLCSKLFGCLSHWL Trigger: GAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCTGAGCCGGCGGCTCGATGCACTGACCAGGCAGGTGGAGGTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGCGCCCCTCTGGGCCTTaGTCCACTCGAGCCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRRPSGP*STRACS Trigger: AGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCG...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTATACTGCCCATCTTTTaGGACGAGGACGAGGAAGAG | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCILPIF*DEDEEE Trigger: CTCTTCCTCGTCCTCGTCCAAAAAGATGGGCAGTAT...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGTGGGATGCTGAAGTCTaGGGCAGACTCTGTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVWDAEV*GRLCAF Trigger: GAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCA...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAATCTGCTTGATGCTATaGGCGTTGGGGACTCCGAAG | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRICLML*ALGTPK Trigger: CTTCGGAGTCCCCAACGCCAATAGCATCAAGCAGAT...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATGTAGCCAGTTCTCCTaGTTGTCTTGCCGCTCAGCA | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRCSQFS*LSCRSA Trigger: TGCTGAGCGGCAAGACAACAAGGAGAACTGGCTACA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTTCTGCTCTCTTAGTGTaGGAGAAGCCTCTGATGGAG | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCSALLV*EKPLME Trigger: CTCCATCAGAGGCTTCTCCAACACTAAGAGAGCAGA...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGTCCTGCAAGTGAGGTaGGCTCTCGATTTGGGGTTG | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVVLQVR*ALDLGL Trigger: CAACCCCAAATCGAGAGCCAACCTCACTTGCAGGAC...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTGGGTGATGGTGTTCTaGCCCCCACTGCTGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGWVMVF*PPLLVL Trigger: CAGCACCAGCAGTGGGGGCAAGAACACCATCACCCA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGAGTCACAGTCCCAGGGTaGCTGATGTGGGTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: GGVGTAARSAGGVSRVARVTVPG*LMWVMV Trigger: CACCATCACCCACATCAGCAACCCTGGGACTGTGAC...TCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGCTGGTCTCTCTTTCTTaGTCGGAGCTCACGCAGTGC | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVLVSLS*SELTQC Trigger: GCACTGCGTGAGCTCCGACAAAGAAAGAGAGACCAG...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATTGGGGTCGGGCTTTTaGCCCATGATCATCATGTCC | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRLGSGF*PMIIMS Trigger: GGACATGATGATCATGGGCAAAAAGCCCGACCCCAA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
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CDS GCA 90 bp | GGGTTGGGGGTGCCCGCAATCCCAAAGTCAATTCTGCTCTCTGGTTaGCTGTGGGCAGCAGCACCCGGCCTGTGGAGGCCTGACCACGGC | + |
Preference number: 5 (lower is better) Translates to: GLGVPAIPKSILLSG*LWAAAPGLWRPDHG Trigger: GCCGTGGTCAGGCCTCCACAGGCCGGGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAATTGACTTTGGGATTGCGGGCACCCCCAACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | CAGAGCTGCCGTCTCTGCTCGAAGCTCTTCGGCTGCCTGAGCCACTaGCTCTACAGTGGCCAGAGCTGCATCGGCTGCCTGGGTCACCGC | + |
Preference number: 5 (lower is better) Translates to: QSCRLCSKLFGCLSH*LYSGQSCIGCLGHR Trigger: GCGGTGACCCAGGCAGCCGATGCAGCTCTGGCCACTGTAGAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CAA 90 bp | GCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGATCTGCTCTCTTAGTGTaGGAGAAGCCTCTGATGGAG | + |
Preference number: 5 (lower is better) Translates to: AGAGGVGTAARSAGGVSRSALLV*EKPLME Trigger: CTCCATCAGAGGCTTCTCCAACACTAAGAGAGCAGA...TCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGTGATGGTGTTCTaGCCCCCACTGCTGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCWVMVF*PPLLVL Trigger: CAGCACCAGCAGTGGGGGCAAGAACACCATCACCCA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 90 bp | CTCCTCTTCTCGTTCCAGCTCCTGTCGCTGCAGCTCCCGGATGGCTaGGCGGATCCGCCGCCGTTCTGCCAGATCTGCAGTGACCTCCAG | + |
Preference number: 5 (lower is better) Translates to: LLFSFQLLSLQLPDG*ADPPPFCQICSDLQ Trigger: CTGGAGGTCACTGCAGATCTGGCAGAACGGCGGCGGATCCGCTCAGCCATCCGGGAGCTGCAGCGACAGGAGCTGGAACGAGAAGAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | TCGGGCACAAGTGGAACACCCAGCCGTAAGCTCAGCACCTCCACCTaGCTGGTCAGTGCATCGAGCCGCCGGCTCAGAGCTGCCGTCTCT | + |
Preference number: 5 (lower is better) Translates to: SGTSGTPSRKLSTST*LVSASSRRLRAAVS Trigger: AGAGACGGCAGCTCTGAGCCGGCGGCTCGATGCACTGACCAGGCAGGTGGAGGTGCTGAGCTTACGGCTGGGTGTTCCACTTGTGCCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS CCA 90 bp | GCACAAGTGGAACACCCAGCCGTAAGCTCAGCACCTCCACCTGCCTaGTCAGTGCATCGAGCCGCCGGCTCAGAGCTGCCGTCTCTGCTC | + |
Preference number: 5 (lower is better) Translates to: AQVEHPAVSSAPPPA*SVHRAAGSELPSLL Trigger: GAGCAGAGACGGCAGCTCTGAGCCGGCGGCTCGATGCACTGACCAGGCAGGTGGAGGTGCTGAGCTTACGGCTGGGTGTTCCACTTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CAA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGTCTGGTCCAGCATCTaGTCCAGGACTCCTTCGTCC | + |
Preference number: 5 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWVWSSI*SRTPSS Trigger: GGACGAAGGAGTCCTGGACAAGATGCTGGACCAGAC...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCGTCTGGTCCAGCATCTaGTCCAGGACTCCTTCGTCC | + |
Preference number: 5 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCVWSSI*SRTPSS Trigger: GGACGAAGGAGTCCTGGACAAGATGCTGGACCAGAC...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTGGGATGCTGAAGTCTaGGGCAGACTCTGTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGWDAEV*GRLCAF Trigger: GAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGTTCTCAATCATGGCCTaGCGTGCTTGGGATGCTGAA | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVFSIMA*RAWDAE Trigger: TTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAA...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTCAGCACGGAAACGTTaGGACGCCAGAGCCTCCTCT | + |
Preference number: 5 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCSARKR*DARASS Trigger: AGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTCAGCACGGAAACGTTaGGACGCCAGAGCCTCCTCT | + |
Preference number: 5 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWSARKR*DARASS Trigger: AGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGGTTCTCCTTGTTGTCTaGCCGCTCAGCACGGAAACG | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGVLLVV*PLSTET Trigger: CGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAAC...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTGTCCTCTGGGGTaGGGGTTGGCTCGAGTACTT | + |
Preference number: 5 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCWCPLG*GLARVL Trigger: AAGTACTCGAGCCAACCCCAACCCCAGAGGACACCA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGTGGTGTCCTCTGGGGTaGGGGTTGGCTCGAGTACTT | + |
Preference number: 5 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWWCPLG*GLARVL Trigger: AAGTACTCGAGCCAACCCCAACCCCAGAGGACACCA...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTCGATTTGGGGTTGGTaGTCGGGGACTGAGCACAGA | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGSIWGW*SGTEHR Trigger: TCTGTGCTCAGTCCCCGACAACCAACCCCAAATCGA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGAGTTCTCTCTGCTTCTaGTGGGAGGAAGTGTCACTG | + |
Preference number: 5 (lower is better) Translates to: GAGGVGTAARSAGGVSRVSSLCF*WEEVSL Trigger: CAGTGACACTTCCTCCCACAAGAAGCAGAGAGAACT...CACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | TGTGGAAGTGGCTCAGAGCTGACTGGAGCCTCCACAGCAGGACACTaGGCTCCAGCAGGCTCCAGCAGAGGCTCTGGAGAGGCACTGGTG | + |
Preference number: 5 (lower is better) Translates to: CGSGSELTGASTAGH*APAGSSRGSGEALV Trigger: CACCAGTGCCTCTCCAGAGCCTCTGCTGGAGCCTGCTGGAGCCCAGTGTCCTGCTGTGGAGGCTCCAGTCAGCTCTGAGCCACTTCCACA 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTCGCCCCTCTGGGCCTTaGTCCACTCGAGCCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: VARHSCRANAAHGAAGGCRPSGP*STRACS Trigger: AGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCG...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTTGATGCTATTGGCGTaGGGGACTCCGAAGCTGGTA | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGLMLLA*GTPKLV Trigger: TACCAGCTTCGGAGTCCCCAACGCCAATAGCATCAA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | CCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCAGGGGTTCTGGCGTCGGTTTaGTGGGCTCAGCTGCCCATA | + |
Preference number: 5 (lower is better) Translates to: PPPPRVHSPPASVGPQAGVLASV*WAQLPI Trigger: TATGGGCAGCTGAGCCCACAAAACCGACGCCAGAAC...CCCTGCTTGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTCAGCACGGAAACGTTaGGACGCCAGAGCCTCCTCT | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRSARKR*DARASS Trigger: AGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGA...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCGTTCTCCTTGTTGTCTaGCCGCTCAGCACGGAAACG | + |
Preference number: 5 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCVLLVV*PLSTET Trigger: CGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAAC...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCGTCCTGCAAGTGAGGTaGGCTCTCGATTTGGGGTTG | + |
Preference number: 5 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCVLQVR*ALDLGL Trigger: CAACCCCAAATCGAGAGCCAACCTCACTTGCAGGAC...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGGAGGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTATCAGATGTGAACTTTaGGACTCTGTCTCTCACAGA | + |
Preference number: 5 (lower is better) Translates to: GRCRCWGRGDSSPQRRRCIRCEL*DSVSHR Trigger: TCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGAT...ACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGCCGGTGCTGGGGGCGTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCATCAGATGTGAACTTTaGGACTCTGTCTCTCACAGA | + |
Preference number: 5 (lower is better) Translates to: GAGAGGVGTAARSAGGVSIRCEL*DSVSHR Trigger: TCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGAT...GCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCACGCCCCCAGCACCGGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGAATTCTGCTCTCTGGTaGCCTGTGGGCAGCAGCACC | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRNSALW*PVGSST Trigger: GGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAATT...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAGTCACAGTCCCAGGGTaGCTGATGTGGGTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: AARSAGGVSRVARHSCRAVTVPG*LMWVMV Trigger: CACCATCACCCACATCAGCAACCCTGGGACTGTGAC...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGTCACAGTCCCAGGGTaGCTGATGTGGGTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRVTVPG*LMWVMV Trigger: CACCATCACCCACATCAGCAACCCTGGGACTGTGAC...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGCTGGTCTCTCTTTCTTaGTCGGAGCTCACGCAGTGC | + |
Preference number: 5 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWLVSLS*SELTQC Trigger: GCACTGCGTGAGCTCCGACAAAGAAAGAGAGACCAG...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGTTGGGGTCGGGCTTTTaGCCCATGATCATCATGTCC | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGLGSGF*PMIIMS Trigger: GGACATGATGATCATGGGCAAAAAGCCCGACCCCAA...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000075118.10 ENSMUST00000110011.8 |
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CDS GCA 90 bp | TTCCTGCTGCTCTGGCTCTGGCACCTTACCAGGGTCCAATGTGTGTaGTGCCTGCCTCCTGCTGTCCTCTCGGGGGCCACTACTGGGAAG | + |
Preference number: 5 (lower is better) Translates to: FLLLWLWHLTRVQCV*CLPPAVLSGATTGK Trigger: CTTCCCAGTAGTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCACACACATTGGACCCTGGTAAGGTGCCAGAGCCAGAGCAGCAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGATACTGCCCATCTTTTaGGACGAGGACGAGGAAGAG | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGILPIF*DEDEEE Trigger: CTCTTCCTCGTCCTCGTCCAAAAAGATGGGCAGTAT...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTGGGATGCTGAAGTCTaGGGCAGACTCTGTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPWDAEV*GRLCAF Trigger: GAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGGGATGCTGAAGTCTaGGGCAGACTCTGTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRWDAEV*GRLCAF Trigger: GAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCA...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTCCAGCAACATCTGCTaGATGCTATTGGCGTTGGGG | + |
Preference number: 5 (lower is better) Translates to: GVLTDGAAVGRRTGRCRCSSNIC*MLLALG Trigger: CCCCAACGCCAATAGCATCAAGCAGATGTTGCTGGA...GCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTTCTCCTTGTTGTCTaGCCGCTCAGCACGGAAACG | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPVLLVV*PLSTET Trigger: CGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAAC...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGGCAGCTCTGATCAGCTaGCGCTCCTCATATTCACCG | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRAALIS*RSSYSP Trigger: CGGTGAATATGAGGAGCGCAAGCTGATCAGAGCTGC...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCATCGATTTGGGGTTGGTaGTCGGGGACTGAGCACAGA | + |
Preference number: 5 (lower is better) Translates to: AARSAGGVSRVARHSCRASIWGW*SGTEHR Trigger: TCTGTGCTCAGTCCCCGACAACCAACCCCAAATCGA...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGCTGGTCTCTCTTTCTTaGTCGGAGCTCACGCAGTGC | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPLVSLS*SELTQC Trigger: GCACTGCGTGAGCTCCGACAAAGAAAGAGAGACCAG...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCACTGGTCTCTCTTTCTTaGTCGGAGCTCACGCAGTGC | + |
Preference number: 5 (lower is better) Translates to: AARSAGGVSRVARHSCRALVSLS*SELTQC Trigger: GCACTGCGTGAGCTCCGACAAAGAAAGAGAGACCAG...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS TCA 90 bp | CAGCCTCCTCGGTTACCAGGGGAGGCATGGCTGAAGGTAGTGACGTaGGTGACACTGCCCAGTCGGGTCACAGTCCCAGGGTTGCTGATG | + |
Preference number: 5 (lower is better) Translates to: QPPRLPGEAWLKVVT*VTLPSRVTVPGLLM Trigger: CATCAGCAACCCTGGGACTGTGACCCGACTGGGCAGTGTCACTCACGTCACTACCTTCAGCCATGCCTCCCCTGGTAACCGAGGAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 90 bp | TGGTGGTGGTGCTGCTGCTGCTGCTGCCATTCTCCAAGCGCCTCATaGAACTGGACTCCACTGTGGTGGTGCGGGCCGTCTGAGTGCCAT | + |
Preference number: 5 (lower is better) Translates to: WWWCCCCCCHSPSAS*NWTPLWWCGPSECH Trigger: ATGGCACTCAGACGGCCCGCACCACCACAGTGGAGTCCAGTTTCATGAGGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCACCACCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | TGCTCTGGCTCTGGCACCTTACCAGGGTCCAATGTGTGTGCTGCCTaGCTCCTGCTGTCCTCTCGGGGGCCACTACTGGGAAGTCTACTG | + |
Preference number: 5 (lower is better) Translates to: CSGSGTLPGSNVCAA*LLLSSRGPLLGSLL Trigger: CAGTAGACTTCCCAGTAGTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCACACACATTGGACCCTGGTAAGGTGCCAGAGCCAGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTGCCATCTCTCTTTCTTaGTCGGAGCTCACGCAGTGC | + |
Preference number: 5 (lower is better) Translates to: VGTAARSAGGVSRVARHSAISLS*SELTQC Trigger: GCACTGCGTGAGCTCCGACAAAGAAAGAGAGATGGC...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTTGATGCTATTGGCGTaGGGGACTCCGAAGCTGGTA | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPLMLLA*GTPKLV Trigger: TACCAGCTTCGGAGTCCCCAACGCCAATAGCATCAA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGATCTGCTTGATGCTATaGGCGTTGGGGACTCCGAAG | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPICLML*ALGTPK Trigger: CTTCGGAGTCCCCAACGCCAATAGCATCAAGCAGAT...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGTCCAGCAACATCTGCTaGATGCTATTGGCGTTGGGG | + |
Preference number: 5 (lower is better) Translates to: CFDRRGSSGQAHWEVPVLSSNIC*MLLALG Trigger: CCCCAACGCCAATAGCATCAAGCAGATGTTGCTGGA...CAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTCCAGCAACATCTGCTaGATGCTATTGGCGTTGGGG | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPSSNIC*MLLALG Trigger: CCCCAACGCCAATAGCATCAAGCAGATGTTGCTGGA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | ATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGCCCCAAGCCAGTTCTCCTTGTaGTCTTGCCGCTCAGCACGG | + |
Preference number: 5 (lower is better) Translates to: MSSTSTKGTQSTSIRGAPSQFSL*SCRSAR Trigger: CCGTGCTGAGCGGCAAGACAACAAGGAGAACTGGCT...TGGGGCCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTCGATTTGGGGTTGGTaGTCGGGGACTGAGCACAGA | + |
Preference number: 5 (lower is better) Translates to: VGTAARSAGGVSRVARHSSIWGW*SGTEHR Trigger: TCTGTGCTCAGTCCCCGACAACCAACCCCAAATCGA...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTGTCCTGCAAGTGAGGTaGGCTCTCGATTTGGGGTTG | + |
Preference number: 5 (lower is better) Translates to: VGTAARSAGGVSRVARHSVLQVR*ALDLGL Trigger: CAACCCCAAATCGAGAGCCAACCTCACTTGCAGGAC...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
||
CDS-3UTR CAA 90 bp | GTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGAGTTCTCTCTGCTTCTaGTGGGAGGAAGTGTCACTG | + |
Preference number: 5 (lower is better) Translates to: VLTDGAAVGRRTGRCRCWSSLCF*WEEVSL Trigger: CAGTGACACTTCCTCCCACAAGAAGCAGAGAGAACT...CCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 90 bp | CCTGCCAATCGTGCGAGGGCGGCCTGCTGTTCAGCTTCTCGCTGTTaGGAGTGTAGCCAGTTCTCCTTGTTGTCTTGCCGCTCAGCACGG | + |
Preference number: 5 (lower is better) Translates to: PANRARAACCSASRC*ECSQFSLLSCRSAR Trigger: CCGTGCTGAGCGGCAAGACAACAAGGAGAACTGGCTACACTCTCAACAGCGAGAAGCTGAACAGCAGGCCGCCCTCGCACGATTGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS TCA 90 bp | AGTCTACTGCACAGTCTCCCAGCCAAGGTGGCAGCCTTAATCTCCTaGGCTCGCACTCGGCGGATGGCAGCTCTGATCAGCTTGCGCTCC | + |
Preference number: 5 (lower is better) Translates to: SLLHSLPAKVAALIS*ARTRRMAALISLRS Trigger: GGAGCGCAAGCTGATCAGAGCTGCCATCCGCCGAGTGCGAGCTCAGGAGATTAAGGCTGCCACCTTGGCTGGGAGACTGTGCAGTAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | CAGTCTGGCTCTCGAAGCCGCACCATGTCCTCTGTATCCAGGAGCTaGGGGCAGTCCGCATGGGTCTCAGCGGATGAGAAGGCCATTTCA | + |
Preference number: 5 (lower is better) Translates to: QSGSRSRTMSSVSRS*GQSAWVSADEKAIS Trigger: TGAAATGGCCTTCTCATCCGCTGAGACCCATGCGGACTGCCCGCAGCTCCTGGATACAGAGGACATGGTGCGGCTTCGAGAGCCAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | CTGCCTGGCGTCTTTCAAGGGCTGCCAGGCTGCCAGGACGTGAGCTaGTCTGGTCCTCTCGGTCGAAGATACTGCCCATCTTTTTGGACG | + |
Preference number: 5 (lower is better) Translates to: LPGVFQGLPGCQDVS*SGPLGRRYCPSFWT Trigger: CGTCCAAAAAGATGGGCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGAAAGACGCCAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | CACCGGCACTCCGAAGCAGTGTGGTCAACTCCTCGACATCATTCATaGACTCCAGTCTCCCTGCCAATCGTGCGAGGGCGGCCTGCTGTT | + |
Preference number: 5 (lower is better) Translates to: HRHSEAVWSTPRHHS*TPVSLPIVRGRPAV Trigger: AACAGCAGGCCGCCCTCGCACGATTGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGGAGTTGACCACACTGCTTCGGAGTGCCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGGTGGTTGTGTCTGGTCCAGCATCTaGTCCAGGACTCCTTCGTCC | + |
Preference number: 5 (lower is better) Translates to: VARHSCRANAAHGAAGGCVWSSI*SRTPSS Trigger: GGACGAAGGAGTCCTGGACAAGATGCTGGACCAGAC...ACAACCACCTGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGATACTGCCCATCTTTTaGGACGAGGACGAGGAAGAG | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPILPIF*DEDEEE Trigger: CTCTTCCTCGTCCTCGTCCAAAAAGATGGGCAGTAT...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGATACTGCCCATCTTTTaGGACGAGGACGAGGAAGAG | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRILPIF*DEDEEE Trigger: CTCTTCCTCGTCCTCGTCCAAAAAGATGGGCAGTAT...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTGCCGCGCATTCTCAATCATGGCCTaGCGTGCTTGGGATGCTGAA | + |
Preference number: 5 (lower is better) Translates to: AARSAGGVSRVARHSCRAFSIMA*RAWDAE Trigger: TTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAA...TGCGCGGCAAGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTTCTCAATCATGGCCTaGCGTGCTTGGGATGCTGAA | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRFSIMA*RAWDAE Trigger: TTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAA...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTTCTCAATCATGGCCTaGCGTGCTTGGGATGCTGAA | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPFSIMA*RAWDAE Trigger: TTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGGGGACAGCAGCCCGCAGCGCAGGCGGTGTGAGCAGAGTGGCTAGACATTCTTTGATGCTATTGGCGTaGGGGACTCCGAAGCTGGTA | + |
Preference number: 5 (lower is better) Translates to: VGTAARSAGGVSRVARHSLMLLA*GTPKLV Trigger: TACCAGCTTCGGAGTCCCCAACGCCAATAGCATCAA...AGAATGTCTAGCCACTCTGCTCACACCGCCTGCGCTGCGGGCTGCTGTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCATGGTGTCCTCTGGGGTaGGGGTTGGCTCGAGTACTT | + |
Preference number: 5 (lower is better) Translates to: VSRVARHSCRANAAHGAAWCPLG*GLARVL Trigger: AAGTACTCGAGCCAACCCCAACCCCAGAGGACACCA...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GAGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGTCTGCTCTCTTAGTGTaGGAGAAGCCTCTGATGGAG | + |
Preference number: 5 (lower is better) Translates to: ERCFDRRGSSGQAHWEVPSALLV*EKPLME Trigger: CTCCATCAGAGGCTTCTCCAACACTAAGAGAGCAGA...CGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | AGAGGTGTTTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGAGTTCTCTCTGCTTCTaGTGGGAGGAAGTGTCACTG | + |
Preference number: 5 (lower is better) Translates to: RGVLTDGAAVGRRTGRCRSSLCF*WEEVSL Trigger: CAGTGACACTTCCTCCCACAAGAAGCAGAGAGAACT...CCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAAACACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | TCGGCTGCCTGGGTCACCGCTGACCGGCCTGCTTCAGCCACCGTCTaGAGTTCTTGTAATGCCTGGCTCAACTGTTCTTCAAAGGCTGCA | + |
Preference number: 5 (lower is better) Translates to: SAAWVTADRPASATV*SSCNAWLNCSSKAA Trigger: TGCAGCCTTTGAAGAACAGTTGAGCCAGGCATTACAAGAACTGCAGACGGTGGCTGAAGCAGGCCGGTCAGCGGTGACCCAGGCAGCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 90 bp | GATGGTGTTCTTGCCCCCACTGCTGGTGCTGAGAAGGGTTGGGGGTaGCCGCAATCCCAAAGTCAATTCTGCTCTCTGGTTGCCTGTGGG | + |
Preference number: 5 (lower is better) Translates to: DGVLAPTAGAEKGWG*PQSQSQFCSLVACG Trigger: CCCACAGGCAACCAGAGAGCAGAATTGACTTTGGGATTGCGGGCACCCCCAACCCTTCTCAGCACCAGCAGTGGGGGCAAGAACACCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | TGGCGTCTTTCAAGGGCTGCCAGGCTGCCAGGACGTGAGCTGGTCTaGTCCTCTCGGTCGAAGATACTGCCCATCTTTTTGGACGAGGAC | + |
Preference number: 5 (lower is better) Translates to: WRLSRAARLPGRELV*SSRSKILPIFLDED Trigger: GTCCTCGTCCAAAAAGATGGGCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGAAAGACGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | GTGGGTGATGGTGTTCTTGCCCCCACTGCTGGTGCTGAGAAGGGTTaGGGGTGCCCGCAATCCCAAAGTCAATTCTGCTCTCTGGTTGCC | + |
Preference number: 5 (lower is better) Translates to: VGDGVLAPTAGAEKG*GCPQSQSQFCSLVA Trigger: GGCAACCAGAGAGCAGAATTGACTTTGGGATTGCGGGCACCCCCAACCCTTCTCAGCACCAGCAGTGGGGGCAAGAACACCATCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | GTGAGCAGAGTGGCTAGACATTCTTGCCGCGCAAACGCAGCTCATGGCGCCGCAGTCCTGCAAGTGAGGTaGGCTCTCGATTTGGGGTTG | + |
Preference number: 5 (lower is better) Translates to: VSRVARHSCRANAAHGAAVLQVR*ALDLGL Trigger: CAACCCCAAATCGAGAGCCAACCTCACTTGCAGGAC...TGCGGCGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TTTGACAGACGGGGCAGCAGTGGGCAGGCGCACTGGGAGGTGCCGGTGCTGGGGATCAGATGTGAACTTTaGGACTCTGTCTCTCACAGA | + |
Preference number: 5 (lower is better) Translates to: FDRRGSSGQAHWEVPVLGIRCEL*DSVSHR Trigger: TCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGAT...CCCCAGCACCGGCACCTCCCAGTGCGCCTGCCCACTGCTGCCCCGTCTGTCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGAATTCTGCTCTCTGGTaGCCTGTGGGCAGCAGCACC | + |
Preference number: 5 (lower is better) Translates to: SSCPPPPPRVHSPPASVGNSALW*PVGSST Trigger: GGTGCTGCTGCCCACAGGCAACCAGAGAGCAGAATT...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS TCA 90 bp | CTTCTCTGCCTGGCGTCTTTCAAGGGCTGCCAGGCTGCCAGGACGTaGGCTGGTCTGGTCCTCTCGGTCGAAGATACTGCCCATCTTTTT | + |
Preference number: 5 (lower is better) Translates to: LLCLASFKGCQAART*AGLVLSVEDTAHLF Trigger: AAAAAGATGGGCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGAAAGACGCCAGGCAGAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | ACTCTTTCTTCTTCTCTGCCTGGCGTCTTTCAAGGGCTGCCAGGCTaGCAGGACGTGAGCTGGTCTGGTCCTCTCGGTCGAAGATACTGC | + |
Preference number: 5 (lower is better) Translates to: TLSSSLPGVFQGLPG*QDVSWSGPLGRRYC Trigger: GCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGAAAGACGCCAGGCAGAGAAGAAGAAAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | CAGTGTGGTCAACTCCTCGACATCATTCATGGACTCCAGTCTCCCTaGCAATCGTGCGAGGGCGGCCTGCTGTTCAGCTTCTCGCTGTTG | + |
Preference number: 5 (lower is better) Translates to: QCGQLLDIIHGLQSP*QSCEGGLLFSFSLL Trigger: CAACAGCGAGAAGCTGAACAGCAGGCCGCCCTCGCACGATTGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGGAGTTGACCACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | GTAGCCAGTTCTCCTTGTTGTCTTGCCGCTCAGCACGGAAACGTTTaGACGCCAGAGCCTCCTCTTCTCGTTCCAGCTCCTGTCGCTGCA | + |
Preference number: 5 (lower is better) Translates to: VASSPCCLAAQHGNV*TPEPPLLVPAPVAA Trigger: TGCAGCGACAGGAGCTGGAACGAGAAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAACTGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | ACGAGGACGAGGAAGAGGAAGAGGAAAAACTCTTGGTTTGGACCGTaGTGGTGGTGGTGCTGCTGCTGCTGCTGCCATTCTCCAAGCGCC | + |
Preference number: 5 (lower is better) Translates to: TRTRKRKRKNSWFGP*WWWCCCCCCHSPSA Trigger: GGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCACCACCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTTCCTCTTCCTCGTCCTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 90 bp | GGGGTGGGCCATCCTGGAGCCTGGCAACCACGGGAGAATCAGATGTaGACTTTTGGACTCTGTCTCTCACAGAGCCAACTCGACGGAACT | + |
Preference number: 5 (lower is better) Translates to: GVGHPGAWQPRENQM*TFGLCLSQSQLDGT Trigger: AGTTCCGTCGAGTTGGCTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGATTCTCCCGTGGTTGCCAGGCTCCAGGATGGCCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | GCTGCTGCTGCTGCCATCTCTCTTTCTTTGTCGGAGCTCACGCAGTaGAGCCCGGATGAGCTTCCTCTCCTCAAAGTTCGTAGTCTGGTC | + |
Preference number: 5 (lower is better) Translates to: AAAAAISLSLSELTQ*SPDELPLLKVRSLV Trigger: GACCAGACTACGAACTTTGAGGAGAGGAAGCTCATCCGGGCTGCACTGCGTGAGCTCCGACAAAGAAAGAGAGATGGCAGCAGCAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS-3UTR CAA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGTCCAGCAACATCTGCTaGATGCTATTGGCGTTGGGG | + |
Preference number: 5 (lower is better) Translates to: SSCPPPPPRVHSPPASVGSSNIC*MLLALG Trigger: CCCCAACGCCAATAGCATCAAGCAGATGTTGCTGGA...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | TCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGGTGTAGCCAGTTCTCCTaGTTGTCTTGCCGCTCAGCA | + |
Preference number: 5 (lower is better) Translates to: SSCPPPPPRVHSPPASVGCSQFS*LSCRSA Trigger: TGCTGAGCGGCAAGACAACAAGGAGAACTGGCTACA...CCCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS CCA 90 bp | TTGGGCAGACTCTGTGCCTTCATTAACTCTTTCTTCTTCTCTGCCTaGCGTCTTTCAAGGGCTGCCAGGCTGCCAGGACGTGAGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: LGRLCAFINSFFFSA*RLSRAARLPGRELV Trigger: GACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGAAAGACGCCAGGCAGAGAAGAAGAAAGAGTTAATGAAGGCACAGAGTCTGCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGTTGATGCTATTGGCGTaGGGGACTCCGAAGCTGGTA | + |
Preference number: 5 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGLMLLA*GTPKLV Trigger: TACCAGCTTCGGAGTCCCCAACGCCAATAGCATCAA...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS-3UTR CAA 90 bp | ATCATCATGTCCTCCACCTCCACCAAGGGTACACAGTCCACCAGCATCCGTGGGATCTGCTTGATGCTATaGGCGTTGGGGACTCCGAAG | + |
Preference number: 5 (lower is better) Translates to: IIMSSTSTKGTQSTSIRGICLML*ALGTPK Trigger: CTTCGGAGTCCCCAACGCCAATAGCATCAAGCAGAT...CCCACGGATGCTGGTGGACTGTGTACCCTTGGTGGAGGTGGAGGACATGATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000170588.8 |
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CDS GCA 90 bp | TTCCTTGTCCCTCTGGTCTCTCTTTCTTTGTCGGAGCTCACGCAGTaGAGCCCGGATGAGCTTCCTCTCCTCAAAGTTCGTAGTCTGGTC | + |
Preference number: 5 (lower is better) Translates to: FLVPLVSLSLSELTQ*SPDELPLLKVRSLV Trigger: GACCAGACTACGAACTTTGAGGAGAGGAAGCTCATCCGGGCTGCACTGCGTGAGCTCCGACAAAGAAAGAGAGACCAGAGGGACAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | TGCCAGGACCACCTGCAGAGCCTTCTTTCTCTAGCTTCTCAATCATaGCCTTGCGTGCTTGGGATGCTGAAGTCTTGGGCAGACTCTGTG | + |
Preference number: 5 (lower is better) Translates to: CQDHLQSLLSLASQS*PCVLGMLKSWADSV Trigger: CACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGAGAAAGAAGGCTCTGCAGGTGGTCCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 90 bp | GACCACCTGCAGAGCCTTCTTTCTCTAGCTTCTCAATCATGGCCTTaGGTGCTTGGGATGCTGAAGTCTTGGGCAGACTCTGTGCCTTCA | + |
Preference number: 5 (lower is better) Translates to: DHLQSLLSLASQSWP*VLGMLKSWADSVPS Trigger: TGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGAGAAAGAAGGCTCTGCAGGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | ACGAGGAAGAGGAAGAGGAAAAACTCTTGGTTTGGACCGTGGTGGTaGTGGTGCTGCTGCTGCTGCTGCCATCTCTCTTTCTTTGTCGGA | + |
Preference number: 5 (lower is better) Translates to: TRKRKRKNSWFGPWW*WCCCCCCHLSFFVG Trigger: TCCGACAAAGAAAGAGAGATGGCAGCAGCAGCAGCAGCACCACCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTTCCTCTTCCTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS CCA 90 bp | ACGAGGACGAGGAAGAGGAAGAGGAAAAACTCTTGGTTTGGACCGTaGTGGTGGTGGTGCTGCTGCTGCTGCTGCCATCTCTCTTTCTTT | + |
Preference number: 5 (lower is better) Translates to: TRTRKRKRKNSWFGP*WWWCCCCCCHLSFF Trigger: AAAGAAAGAGAGATGGCAGCAGCAGCAGCAGCACCACCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTTCCTCTTCCTCGTCCTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS CCA 90 bp | GCAGAGCCTTCTTTCTCTAGCTTCTCAATCATGGCCTTGCGTGCTTaGGATGCTGAAGTCTTGGGCAGACTCTGTGCCTTCATTAACTCT | + |
Preference number: 5 (lower is better) Translates to: AEPSFSSFSIMALRA*DAEVLGRLCAFINS Trigger: AGAGTTAATGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGAGAAAGAAGGCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 90 bp | CTAGCTTCTCAATCATGGCCTTGCGTGCTTGGGATGCTGAAGTCTTaGGCAGACTCTGTGCCTTCATTAACTCTTTCTTCTTCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: LASQSWPCVLGMLKS*ADSVPSLTLSSSLP Trigger: AGGCAGAGAAGAAGAAAGAGTTAATGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | TCAGCCGCCCGCTGGCTGTGCCTGGTGGTGGTCTCCGTGGCCACATaGCTTCGGCTCTCGCCCGGCCGGGCCCGTGCCTCCCGTAGCCTC | + |
Preference number: 6 (lower is better) Translates to: SAARWLCLVVVSVAT*LRLSPGRARASRSL Trigger: GAGGCTACGGGAGGCACGGGCCCGGCCGGGCGAGAGCCGAAGCAATGTGGCCACGGAGACCACCACCAGGCACAGCCAGCGGGCGGCTGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | CAGTGCATCGAGCCGCCGGCTCAGAGCTGCCGTCTCTaGTCGAAGCTCTTCGGCTGCCTGAGCCACTGGCTC | + |
Preference number: 6 (lower is better) Translates to: QCIEPPAQSCRL*SKLFGCLSHWL Trigger: GAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCTGAGCCGGCGGCTCGATGCACTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 72 bp | CTGCCTGGTCAGTGCATCGAGCCGCCGGCTCAGAGCTaGCGTCTCTGCTCGAAGCTCTTCGGCTGCCTGAGC | + |
Preference number: 6 (lower is better) Translates to: LPGQCIEPPAQS*RLCSKLFGCLS Trigger: GCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCTGAGCCGGCGGCTCGATGCACTGACCAGGCAG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 72 bp | GTGCCGACAGTAGAGCCATCAGCCGCCCGCTGGCTGTaGCTGGTGGTGGTCTCCGTGGCCACATTGCTTCGG | + |
Preference number: 6 (lower is better) Translates to: VPTVEPSAARWL*LVVVSVATLLR Trigger: CCGAAGCAATGTGGCCACGGAGACCACCACCAGGCACAGCCAGCGGGCGGCTGATGGCTCTACTGTCGGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | ACTGGCTCTACAGTGGCCAGAGCTGCATCGGCTGCCTaGGTCACCGCTGACCGGCCTGCTTCAGCCACCGTC | + |
Preference number: 6 (lower is better) Translates to: TGSTVARAASAA*VTADRPASATV Trigger: GACGGTGGCTGAAGCAGGCCGGTCAGCGGTGACCCAGGCAGCCGATGCAGCTCTGGCCACTGTAGAGCCAGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS TCA 72 bp | AGTGGCCAGAGCTGCATCGGCTGCCTGGGTCACCGCTaGCCGGCCTGCTTCAGCCACCGTCTGCAGTTCTTG | + |
Preference number: 6 (lower is better) Translates to: SGQSCIGCLGHR*PACFSHRLQFL Trigger: CAAGAACTGCAGACGGTGGCTGAAGCAGGCCGGTCAGCGGTGACCCAGGCAGCCGATGCAGCTCTGGCCACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS TCA 72 bp | TCGTTCCAGCTCCTGTCGCTGCAGCTCCCGGATGGCTaGGCGGATCCGCCGCCGTTCTGCCAGATCTGCAGT | + |
Preference number: 6 (lower is better) Translates to: SFQLLSLQLPDG*ADPPPFCQICS Trigger: ACTGCAGATCTGGCAGAACGGCGGCGGATCCGCTCAGCCATCCGGGAGCTGCAGCGACAGGAGCTGGAACGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | CGTCAGCTCCTCTGCACTCAGGGGACTCCGCCCCTCTaGGCCTTTGTCCACTCGAGCCTGCTCTGCGCCATT | + |
Preference number: 6 (lower is better) Translates to: RQLLCTQGTPPL*AFVHSSLLCAI Trigger: AATGGCGCAGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | CTTCTCGTTCCAGCTCCTGTCGCTGCAGCTCCCGGATaGCTGAGCGGATCCGCCGCCGTTCTGCCAGATCTG | + |
Preference number: 6 (lower is better) Translates to: LLVPAPVAAAPG*LSGSAAVLPDL Trigger: CAGATCTGGCAGAACGGCGGCGGATCCGCTCAGCCATCCGGGAGCTGCAGCGACAGGAGCTGGAACGAGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | GCCGTCAGCTCCTCTGCACTCAGGGGACTCCGCCCCTCTGGGCCTTaGTCCACTCGAGCCTGCTCTGCGCCATTAGCTGCTTCCACTGTG | + |
Preference number: 6 (lower is better) Translates to: AVSSSALRGLRPSGP*STRACSAPLAASTV Trigger: CACAGTGGAAGCAGCTAATGGCGCAGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | GCTCAGAGCTGCCGTCTCTGCTCGAAGCTCTTCGGCTaGCTGAGCCACTGGCTCTACAGTGGCCAGAGCTGC | + |
Preference number: 6 (lower is better) Translates to: AQSCRLCSKLFG*LSHWLYSGQSC Trigger: GCAGCTCTGGCCACTGTAGAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCTGAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 72 bp | AGTGGAACACCCAGCCGTAAGCTCAGCACCTCCACCTaGCTGGTCAGTGCATCGAGCCGCCGGCTCAGAGCT | + |
Preference number: 6 (lower is better) Translates to: SGTPSRKLSTST*LVSASSRRLRA Trigger: AGCTCTGAGCCGGCGGCTCGATGCACTGACCAGGCAGGTGGAGGTGCTGAGCTTACGGCTGGGTGTTCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS GCA 72 bp | CAGGACTCCTTCGTCCTCAATGGCCGTCAGCTCCTCTaGACTCAGGGGACTCCGCCCCTCTGGGCCTTTGTC | + |
Preference number: 6 (lower is better) Translates to: QDSFVLNGRQLL*TQGTPPLWAFV Trigger: GACAAAGGCCCAGAGGGGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGCCATTGAGGACGAAGGAGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | CTCTGGCTCTGGCACCTTACCAGGGTCCAATGTGTGTaGTGCCTGCCTCCTGCTGTCCTCTCGGGGGCCACT | + |
Preference number: 6 (lower is better) Translates to: LWLWHLTRVQCV*CLPPAVLSGAT Trigger: AGTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCACACACATTGGACCCTGGTAAGGTGCCAGAGCCAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | CGTCTCTGCTCGAAGCTCTTCGGCTGCCTGAGCCACTaGCTCTACAGTGGCCAGAGCTGCATCGGCTGCCTG | + |
Preference number: 6 (lower is better) Translates to: RLCSKLFGCLSH*LYSGQSCIGCL Trigger: CAGGCAGCCGATGCAGCTCTGGCCACTGTAGAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS CCA 72 bp | CTGCCTGCCTCCTGCTGTCCTCTCGGGGGCCACTACTaGGAAGTCTACTGCACAGTCTCCCAGCCAAGGTGG | + |
Preference number: 6 (lower is better) Translates to: LPASCCPLGGHY*EVYCTVSQPRW Trigger: CCACCTTGGCTGGGAGACTGTGCAGTAGACTTCCCAGTAGTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | GTAACTGTGCCGACAGTAGAGCCATCAGCCGCCCGCTaGCTGTGCCTGGTGGTGGTCTCCGTGGCCACATTG | + |
Preference number: 6 (lower is better) Translates to: VTVPTVEPSAAR*LCLVVVSVATL Trigger: CAATGTGGCCACGGAGACCACCACCAGGCACAGCCAGCGGGCGGCTGATGGCTCTACTGTCGGCACAGTTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 72 bp | TCCTCTGCACTCAGGGGACTCCGCCCCTCTGGGCCTTaGTCCACTCGAGCCTGCTCTGCGCCATTAGCTGCT | + |
Preference number: 6 (lower is better) Translates to: SSALRGLRPSGP*STRACSAPLAA Trigger: AGCAGCTAATGGCGCAGAGCAGGCTCGAGTGGACAAAGGCCCAGAGGGGCGGAGTCCCCTGAGTGCAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | AGAGCTGCCGTCTCTGCTCGAAGCTCTTCGGCTGCCTaGGCCACTGGCTCTACAGTGGCCAGAGCTGCATCG | + |
Preference number: 6 (lower is better) Translates to: RAAVSARSSSAA*ATGSTVARAAS Trigger: CGATGCAGCTCTGGCCACTGTAGAGCCAGTGGCTCAGGCAGCCGAAGAGCTTCGAGCAGAGACGGCAGCTCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS TCA 72 bp | CTGGCGTCTTTCAAGGGCTGCCAGGCTGCCAGGACGTaGGCTGGTCTGGTCCTCTCGGTCGAAGATACTGCC | + |
Preference number: 6 (lower is better) Translates to: LASFKGCQAART*AGLVLSVEDTA Trigger: GGCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGAAAGACGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | CGGTTACCAGGGGAGGCATGGCTGAAGGTAGTGACGTaGGTGACACTGCCCAGTCGGGTCACAGTCCCAGGG | + |
Preference number: 6 (lower is better) Translates to: RLPGEAWLKVVT*VTLPSRVTVPG Trigger: CCCTGGGACTGTGACCCGACTGGGCAGTGTCACTCACGTCACTACCTTCAGCCATGCCTCCCCTGGTAACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | TCTGGCACCTTACCAGGGTCCAATGTGTGTGCTGCCTaGCTCCTGCTGTCCTCTCGGGGGCCACTACTGGGA | + |
Preference number: 6 (lower is better) Translates to: SGTLPGSNVCAA*LLLSSRGPLLG Trigger: TCCCAGTAGTGGCCCCCGAGAGGACAGCAGGAGGCAGGCAGCACACACATTGGACCCTGGTAAGGTGCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | GGTCCAGCATCTTGTCCAGGACTCCTTCGTCCTCAATaGCCGTCAGCTCCTCTGCACTCAGGGGACTCCGCC | + |
Preference number: 6 (lower is better) Translates to: GPASCPGLLRPQ*PSAPLHSGDSA Trigger: GGCGGAGTCCCCTGAGTGCAGAGGAGCTGACGGCCATTGAGGACGAAGGAGTCCTGGACAAGATGCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | AGTCGGGTCACAGTCCCAGGGTTGCTGATGTGGGTGATGGTGTTCTaGCCCCCACTGCTGGTGCTGAGAAGGGTTGGGGGTGCCCGCAAT | + |
Preference number: 6 (lower is better) Translates to: SRVTVPGLLMWVMVF*PPLLVLRRVGGARN Trigger: ATTGCGGGCACCCCCAACCCTTCTCAGCACCAGCAGTGGGGGCAAGAACACCATCACCCACATCAGCAACCCTGGGACTGTGACCCGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | CACAGTCTCCCAGCCAAGGTGGCAGCCTTAATCTCCTaGGCTCGCACTCGGCGGATGGCAGCTCTGATCAGC | + |
Preference number: 6 (lower is better) Translates to: HSLPAKVAALIS*ARTRRMAALIS Trigger: GCTGATCAGAGCTGCCATCCGCCGAGTGCGAGCTCAGGAGATTAAGGCTGCCACCTTGGCTGGGAGACTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | TGCTGCTGCTGCTGCTGCCATTCTCCAAGCGCCTCATaGAACTGGACTCCACTGTGGTGGTGCGGGCCGTCT | + |
Preference number: 6 (lower is better) Translates to: CCCCCCHSPSAS*NWTPLWWCGPS Trigger: AGACGGCCCGCACCACCACAGTGGAGTCCAGTTTCATGAGGCGCTTGGAGAATGGCAGCAGCAGCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | TCTCGAAGCCGCACCATGTCCTCTGTATCCAGGAGCTaGGGGCAGTCCGCATGGGTCTCAGCGGATGAGAAG | + |
Preference number: 6 (lower is better) Translates to: SRSRTMSSVSRS*GQSAWVSADEK Trigger: CTTCTCATCCGCTGAGACCCATGCGGACTGCCCGCAGCTCCTGGATACAGAGGACATGGTGCGGCTTCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | CGTGCGAGGGCGGCCTGCTGTTCAGCTTCTCGCTGTTaGGAGTGTAGCCAGTTCTCCTTGTTGTCTTGCCGC | + |
Preference number: 6 (lower is better) Translates to: RARAACCSASRC*ECSQFSLLSCR Trigger: GCGGCAAGACAACAAGGAGAACTGGCTACACTCTCAACAGCGAGAAGCTGAACAGCAGGCCGCCCTCGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | AGAGCCAACTCGACGGAACTGGGACGGTCCTGCAAGTaGGGTTGGCTCTCGATTTGGGGTTGGTTGTCGGGG | + |
Preference number: 6 (lower is better) Translates to: RANSTELGRSCK*GWLSIWGWLSG Trigger: CCCCGACAACCAACCCCAAATCGAGAGCCAACCTCACTTGCAGGACCGTCCCAGTTCCGTCGAGTTGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | AACTGGACTCCACTGTGGTGGTGCGGGCCGTCTGAGTaGCATCATTGGAGTGAACGAGGCGCTCGGTTTTGG | + |
Preference number: 6 (lower is better) Translates to: NWTPLWWCGPSE*HHWSERGARFW Trigger: CCAAAACCGAGCGCCTCGTTCACTCCAATGATGGCACTCAGACGGCCCGCACCACCACAGTGGAGTCCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | GTCTTTCAAGGGCTGCCAGGCTGCCAGGACGTGAGCTaGTCTGGTCCTCTCGGTCGAAGATACTGCCCATCT | + |
Preference number: 6 (lower is better) Translates to: VFQGLPGCQDVS*SGPLGRRYCPS Trigger: AGATGGGCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGAAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | TGTAGCCAGTTCTCCTTGTTGTCTTGCCGCTCAGCACGGAAACGTTaGGACGCCAGAGCCTCCTCTTCTCGTTCCAGCTCCTGTCGCTGC | + |
Preference number: 6 (lower is better) Translates to: CSQFSLLSCRSARKR*DARASSSRSSSCRC Trigger: GCAGCGACAGGAGCTGGAACGAGAAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAACTGGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | GACATCATTCATGGACTCCAGTCTCCCTGCCAATCGTaGGAGGGCGGCCTGCTGTTCAGCTTCTCGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: DIIHGLQSPCQS*EGGLLFSFSLL Trigger: CAACAGCGAGAAGCTGAACAGCAGGCCGCCCTCGCACGATTGGCAGGGAGACTGGAGTCCATGAATGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | CAACTCCTCGACATCATTCATGGACTCCAGTCTCCCTaGCAATCGTGCGAGGGCGGCCTGCTGTTCAGCTTC | + |
Preference number: 6 (lower is better) Translates to: QLLDIIHGLQSP*QSCEGGLLFSF Trigger: GAAGCTGAACAGCAGGCCGCCCTCGCACGATTGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGGAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | TCAAGGGCTGCCAGGCTGCCAGGACGTGAGCTGGTCTaGTCCTCTCGGTCGAAGATACTGCCCATCTTTTTG | + |
Preference number: 6 (lower is better) Translates to: SRAARLPGRELV*SSRSKILPIFL Trigger: CAAAAAGATGGGCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTCCTGGCAGCCTGGCAGCCCTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | TCCGAAGCAGTGTGGTCAACTCCTCGACATCATTCATaGACTCCAGTCTCCCTGCCAATCGTGCGAGGGCGG | + |
Preference number: 6 (lower is better) Translates to: SEAVWSTPRHHS*TPVSLPIVRGR Trigger: CCGCCCTCGCACGATTGGCAGGGAGACTGGAGTCCATGAATGATGTCGAGGAGTTGACCACACTGCTTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | CACTGTGGTCACATCCTGGCTGGTGTCCTCTGGGGTTaGGGTTGGCTCGAGTACTTCTGTCTGCTGTTCCTG | + |
Preference number: 6 (lower is better) Translates to: HCGHILAGVLWG*GWLEYFCLLFL Trigger: CAGGAACAGCAGACAGAAGTACTCGAGCCAACCCCAACCCCAGAGGACACCAGCCAGGATGTGACCACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 72 bp | CGGGTCTTGGCTCGGCACCAGTCCAGCAACATCTGCTaGATGCTATTGGCGTTGGGGACTCCGAAGCTGGTA | + |
Preference number: 6 (lower is better) Translates to: RVLARHQSSNIC*MLLALGTPKLV Trigger: TACCAGCTTCGGAGTCCCCAACGCCAATAGCATCAAGCAGATGTTGCTGGACTGGTGCCGAGCCAAGACCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | GCCATCCTGGAGCCTGGCAACCACGGGAGAATCAGATGTGAACTTTaGGACTCTGTCTCTCACAGAGCCAACTCGACGGAACTGGGACGG | + |
Preference number: 6 (lower is better) Translates to: AILEPGNHGRIRCEL*DSVSHRANSTELGR Trigger: CCGTCCCAGTTCCGTCGAGTTGGCTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGATTCTCCCGTGGTTGCCAGGCTCCAGGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | TGGGTCACCGCTGACCGGCCTGCTTCAGCCACCGTCTaGAGTTCTTGTAATGCCTGGCTCAACTGTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: WVTADRPASATV*SSCNAWLNCSS Trigger: TGAAGAACAGTTGAGCCAGGCATTACAAGAACTGCAGACGGTGGCTGAAGCAGGCCGGTCAGCGGTGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS CCA 72 bp | TCTCCTTGTTGTCTTGCCGCTCAGCACGGAAACGTTTaGACGCCAGAGCCTCCTCTTCTCGTTCCAGCTCCT | + |
Preference number: 6 (lower is better) Translates to: SPCCLAAQHGNV*TPEPPLLVPAP Trigger: AGGAGCTGGAACGAGAAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CAA 72 bp | TTCTCCTTGTTGTCTTGCCGCTCAGCACGGAAACGTTaGGACGCCAGAGCCTCCTCTTCTCGTTCCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: FSLLSCRSARKR*DARASSSRSSS Trigger: GGAGCTGGAACGAGAAGAGGAGGCTCTGGCGTCCAAACGTTTCCGTGCTGAGCGGCAAGACAACAAGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CAA 72 bp | TCACTGTGGTCACATCCTGGCTGGTGTCCTCTGGGGTaGGGGTTGGCTCGAGTACTTCTGTCTGCTGTTCCT | + |
Preference number: 6 (lower is better) Translates to: SLWSHPGWCPLG*GLARVLLSAVP Trigger: AGGAACAGCAGACAGAAGTACTCGAGCCAACCCCAACCCCAGAGGACACCAGCCAGGATGTGACCACAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 72 bp | CCGTTCTCGTTCCTTGTCCCTCTGGTCTCTCTTTCTTaGTCGGAGCTCACGCAGTGCAGCCCGGATGAGCTT | + |
Preference number: 6 (lower is better) Translates to: PFSFLVPLVSLS*SELTQCSPDEL Trigger: AAGCTCATCCGGGCTGCACTGCGTGAGCTCCGACAAAGAAAGAGAGACCAGAGGGACAAGGAACGAGAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | CGGATGAGCTTCCTCTCCTCAAAGTTCGTAGTCTGGTCCAGCATCTaGTCCAGGACTCCTTCGTCCTCAATGGCCGTCAGCTCCTCTGCA | + |
Preference number: 6 (lower is better) Translates to: RMSFLSSKFVVWSSI*SRTPSSSMAVSSSA Trigger: TGCAGAGGAGCTGACGGCCATTGAGGACGAAGGAGTCCTGGACAAGATGCTGGACCAGACTACGAACTTTGAGGAGAGGAAGCTCATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | GACGTGAGCTGGTCTGGTCCTCTCGGTCGAAGATACTaGCCATCTTTTTGGACGAGGACGAGGAAGAGGAAG | + |
Preference number: 6 (lower is better) Translates to: DVSWSGPLGRRY*PSFWTRTRKRK Trigger: CTTCCTCTTCCTCGTCCTCGTCCAAAAAGATGGGCAGTATCTTCGACCGAGAGGACCAGACCAGCTCACGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | CCTCTGGTCTCTCTTTCTTTGTCGGAGCTCACGCAGTaGAGCCCGGATGAGCTTCCTCTCCTCAAAGTTCGT | + |
Preference number: 6 (lower is better) Translates to: PLVSLSLSELTQ*SPDELPLLKVR Trigger: ACGAACTTTGAGGAGAGGAAGCTCATCCGGGCTGCACTGCGTGAGCTCCGACAAAGAAAGAGAGACCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | AGGAAGAGGAAGAGGAAAAACTCTTGGTTTGGACCGTaGTGGTGGTGGTGCTGCTGCTGCTGCTGCCATCTC | + |
Preference number: 6 (lower is better) Translates to: RKRKRKNSWFGP*WWWCCCCCCHL Trigger: GAGATGGCAGCAGCAGCAGCAGCACCACCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTTCCTCTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020718.10 |
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CDS CCA 72 bp | ATGTCCTCTGTATCCAGGAGCTGCGGGCAGTCCGCATaGGTCTCAGCGGATGAGAAGGCCATTTCAAAGTTC | + |
Preference number: 6 (lower is better) Translates to: MSSVSRSCGQSA*VSADEKAISKF Trigger: GAACTTTGAAATGGCCTTCTCATCCGCTGAGACCCATGCGGACTGCCCGCAGCTCCTGGATACAGAGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | GGACCACCTGCAGAGCCTTCTTTCTCTAGCTTCTCAATCATGGCCTaGCGTGCTTGGGATGCTGAAGTCTTGGGCAGACTCTGTGCCTTC | + |
Preference number: 6 (lower is better) Translates to: GPPAEPSFSSFSIMA*RAWDAEVLGRLCAF Trigger: GAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGAGAAAGAAGGCTCTGCAGGTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | TGCGCTCCTCATATTCACCGGCACTCCGAAGCAGTGTaGTCAACTCCTCGACATCATTCATGGACTCCAGTC | + |
Preference number: 6 (lower is better) Translates to: CAPHIHRHSEAV*STPRHHSWTPV Trigger: GACTGGAGTCCATGAATGATGTCGAGGAGTTGACCACACTGCTTCGGAGTGCCGGTGAATATGAGGAGCGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000136243.2 ENSMUST00000156201.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | AGGAAGAGGAAGAGGAAAAACTCTTGGTTTGGACCGTaGTGGTGGTGGTGCTGCTGCTGCTGCTGCCATTCT | + |
Preference number: 6 (lower is better) Translates to: RKRKRKNSWFGP*WWWCCCCCCHS Trigger: AGAATGGCAGCAGCAGCAGCAGCACCACCACCACCACGGTCCAAACCAAGAGTTTTTCCTCTTCCTCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 72 bp | TTCCTCTCCTCAAAGTTCGTAGTCTGGTCCAGCATCTaGTCCAGGACTCCTTCGTCCTCAATGGCCGTCAGC | + |
Preference number: 6 (lower is better) Translates to: FLSSKFVVWSSI*SRTPSSSMAVS Trigger: GCTGACGGCCATTGAGGACGAAGGAGTCCTGGACAAGATGCTGGACCAGACTACGAACTTTGAGGAGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | CATCCTGGAGCCTGGCAACCACGGGAGAATCAGATGTaGACTTTTGGACTCTGTCTCTCACAGAGCCAACTC | + |
Preference number: 6 (lower is better) Translates to: HPGAWQPRENQM*TFGLCLSQSQL Trigger: GAGTTGGCTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGATTCTCCCGTGGTTGCCAGGCTCCAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | CACCTGCAGAGCCTTCTTTCTCTAGCTTCTCAATCATaGCCTTGCGTGCTTGGGATGCTGAAGTCTTGGGCA | + |
Preference number: 6 (lower is better) Translates to: HLQSLLSLASQS*PCVLGMLKSWA Trigger: TGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGAGAAAGAAGGCTCTGCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 72 bp | GAGCCTGGCAACCACGGGAGAATCAGATGTGAACTTTaGGACTCTGTCTCTCACAGAGCCAACTCGACGGAA | + |
Preference number: 6 (lower is better) Translates to: EPGNHGRIRCEL*DSVSHRANSTE Trigger: TTCCGTCGAGTTGGCTCTGTGAGAGACAGAGTCCAAAAGTTCACATCTGATTCTCCCGTGGTTGCCAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | GAACGTTGGCAGGATTTCGTTTCAGACGGGTCTGCTCTCTTAGTGTaGGAGAAGCCTCTGATGGAGTCCAAGGTATCTGAGGGCTCTGTG | + |
Preference number: 6 (lower is better) Translates to: ERWQDFVSDGSALLV*EKPLMESKVSEGSV Trigger: CACAGAGCCCTCAGATACCTTGGACTCCATCAGAGGCTTCTCCAACACTAAGAGAGCAGACCCGTCTGAAACGAAATCCTGCCAACGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS TCA 72 bp | AGGTTGGCTCTCGATTTGGGGTTGGTTGTCGGGGACTaGGCACAGATAGTGAACGTTGGCAGGATTTCGTTT | + |
Preference number: 6 (lower is better) Translates to: RLALDLGLVVGD*AQIVNVGRISF Trigger: AAACGAAATCCTGCCAACGTTCACTATCTGTGCTCAGTCCCCGACAACCAACCCCAAATCGAGAGCCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS GCA 72 bp | CAGAGCCTTCTTTCTCTAGCTTCTCAATCATGGCCTTaGGTGCTTGGGATGCTGAAGTCTTGGGCAGACTCT | + |
Preference number: 6 (lower is better) Translates to: QSLLSLASQSWP*VLGMLKSWADS Trigger: AGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGAGAAAGAAGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | TCTTTCTCTAGCTTCTCAATCATGGCCTTGCGTGCTTaGGATGCTGAAGTCTTGGGCAGACTCTGTGCCTTC | + |
Preference number: 6 (lower is better) Translates to: SFSSFSIMALRA*DAEVLGRLCAF Trigger: GAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CAA 90 bp | TCTAGCTTCTCAATCATGGCCTTGCGTGCTTGGGATGCTGAAGTCTaGGGCAGACTCTGTGCCTTCATTAACTCTTTCTTCTTCTCTGCC | + |
Preference number: 6 (lower is better) Translates to: SSFSIMALRAWDAEV*GRLCAFINSFFFSA Trigger: GGCAGAGAAGAAGAAAGAGTTAATGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTGAGAAGCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |
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CDS CCA 72 bp | CAATCATGGCCTTGCGTGCTTGGGATGCTGAAGTCTTaGGCAGACTCTGTGCCTTCATTAACTCTTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: QSWPCVLGMLKS*ADSVPSLTLSS Trigger: AGAAGAAAGAGTTAATGAAGGCACAGAGTCTGCCCAAGACTTCAGCATCCCAAGCACGCAAGGCCATGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020718.10 ENSMUST00000020721.15 ENSMUST00000075118.10 ENSMUST00000110011.8 ENSMUST00000170588.8 |