Pregenerated sensors for SMPDL3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028885Ensembl transcript IDs: ENSMUST00000030709.9
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCCGTCGGCTCACTTCACTGTGGTGATCAAGTTCATGGTGGTTTaGTATGTTTGTATTAAAGCGAATAATGCACCAAGACATGTACCG | + |
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Preference number: 1 (lower is better) Translates to: FPSAHFTVVIKFMVV*YVCIKANNAPRHVP Trigger: CGGTACATGTCTTGGTGCATTATTCGCTTTAATACAAACATATCAAACCACCATGAACTTGATCACCACAGTGAAGTGAGCCGACGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR-3UTR TCA 90 bp | GACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCTTACCAGGAGAAAGATaGACCAAGTCAGTGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DLEQGLHRKHRISKAHLPLPGER*TKSVGG Trigger: CCCACCCACTGACTTGGTTCATCTTTCTCCTGGTAA...GGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR CAA 90 bp | AGTACTAAGGGGTTTTGCACACCACGTACGTTCCCAGTTCAGACCTaGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: STKGFCTPRTFPVQT*SRDYIESTESPRPI Trigger: GATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTGAACTGGGAACGTACGTGGTGTGCAAAACCCCTTAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCTCACTTCACTGTGGTaGTCAAGTTCATGGTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: QTLSRDYIESTESPRPIFLTSLW*SSSWWF Trigger: AAACCACCATGAACTTGATCACCACAGTGAAGTGAG...GAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR-3UTR GCA 90 bp | CAGACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCACTTGGAAGAAATTGTaGTTCTTAGCGCCCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QTLSRDYIESTESPRPIFTWKKL*FLAPSL Trigger: CAGAGAGGGCGCTAAGAAGCACAATTTCTTCCAAGT...GAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR-3UTR CAA 90 bp | TCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGTGGGTTCATCTCTCTCCATaGGGTAACGTTGCCCAATTT | + |
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Preference number: 3 (lower is better) Translates to: SKAQNLQGPSSRRLTSLWVHLSP*GNVAQF Trigger: AAATTGGGCAACGTTACCCAATGGAGAGAGATGAAC...CCACAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR-3UTR CAA 90 bp | AAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGTGGTGATGAAACTTGGAAGAAATaGTGCTTCTTAGCGCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: KHRISKAHLPVGSLHCGDETWKK*CFLAPS Trigger: AGAGGGCGCTAAGAAGCACAATTTCTTCCAAGTTTC...ATCACCACAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR TCA 72 bp | GCTCACTTCACTGTGGTGATCAAGTTCATGGTGGTTTaGTATGTTTGTATTAAAGCGAATAATGCACCAAGA | + |
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Preference number: 3 (lower is better) Translates to: AHFTVVIKFMVV*YVCIKANNAPR Trigger: TCTTGGTGCATTATTCGCTTTAATACAAACATATCAAACCACCATGAACTTGATCACCACAGTGAAGTGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | TCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGTGGCTCGCCCCGCCCTGCTaGGACCCGGCAACTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SKAQNLQGPSSRRLTSLWLAPPC*DPATSQ Trigger: CTGAGAAGTTGCCGGGTCCCAGCAGGGCGGGGCGAG...CCACAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR TCA 90 bp | ACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACCGTGTGCATGGAGCTaGCGCTGGCATCCGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: TTSKAQNLQGPSSRRLTSPCAWS*RWHPAP Trigger: AGGTGCCGGATGCCAGCGTCAGCTCCATGCACACGG...TGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | TACGTTCCCAGTTCAGACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCCAACTCGCCCCGCCCTaGTGGGACCCGGCAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: YVPSSDLEQGLHRKHRISQLAPP*WDPATS Trigger: AGAAGTTGCCGGGTCCCAGCAGGGCGGGGCGAGTTG...GGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTGAACTGGGAACGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | TCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGTGGCATCCCGAGATGCATTaGTCAGGACATCTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SKAQNLQGPSSRRLTSLWHPEMH*SGHLPA Trigger: GGCTGGGAGATGTCCTGAGCAATGCATCTCGGGATG...CCACAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR TCA 90 bp | ACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGAGTACAGATTGGTGTTaGGGACCACAACTCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: TSKAQNLQGPSSRRLTSLSTDWC*GPQLAP Trigger: CGGGGCGAGTTGTGGTCCTCAACACCAATCTGTACT...CAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR TCA 90 bp | AAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGTGGTGATAGAACTGCCCTGCTATaGCCCGATGGTGCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KHRISKAHLPVGSLHCGDRTALL*PDGASG Trigger: TCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCT...ATCACCACAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR TCA 90 bp | AAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGTGGTGATGCAGCAGAGTCAGTATaGGCAGGAAACCAGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: KHRISKAHLPVGSLHCGDAAESV*AGNQAP Trigger: TGGTGCCTGGTTTCCTGCTCATACTGACTCTGCTGC...ATCACCACAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | ACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGGTATCCCTGGATTGTTaGCCCCATCGACCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TSKAQNLQGPSSRRLTSLVSLDC*PHRPLQ Trigger: CTGGAGTGGTCGATGGGGCCAACAATCCAGGGATAC...CAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | GAAGAAATTGTGCTTCTTAGCGCCCTCTCTGGTGAATCCAGGTGTCCCATCCCACAAGCGTTCCACAATTaGCAGCACAGCTGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: EEIVLLSALSGESRCPIPQAFHN*QHSCLS Trigger: GGAGAGGCAGCTGTGCTGGCAATTGTGGAACGCTTG...TGGGATGGGACACCTGGATTCACCAGAGAGGGCGCTAAGAAGCACAATTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | AAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGTGGTGATCCACCTGGTTATAGATaGGGTTGCTCTGTGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: KHRISKAHLPVGSLHCGDPPGYR*GCSVLG Trigger: TCCCAGCACAGAGCAACCGCATCTATAACCAGGTGG...ATCACCACAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | GACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCCGGAAGCTGTCGGTATaGTGGTGTCCAAAGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: DLEQGLHRKHRISKAHLPRKLSV*WCPKNC Trigger: GCAGTTCTTTGGACACCACCATACCGACAGCTTCCG...GGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | TACGTTCCCAGTTCAGACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAACACCTCCAGTACGTaGAGGCTTGGCAGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: YVPSSDLEQGLHRKHRISNTSST*RLGSRV Trigger: GACTCTGCTGCCAAGCCTGCACGTACTGGAGGTGTT...GGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTGAACTGGGAACGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | ACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGCTCTGTGCTGGGAACTaGTTCTTAGGGTGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TSKAQNLQGPSSRRLTSLLCAGN*FLGWKS Trigger: TGACTTCCACCCTAAGAACCAGTTCCCAGCACAGAG...CAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | ACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCACTGACCCGATGGTGCTTCTaGATCACCTTCAGATACTCC | + |
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Preference number: 4 (lower is better) Translates to: TSKAQNLQGPSSRRLTSLTRWCF*ITFRYS Trigger: GGAGTATCTGAAGGTGATCCAGAAGCACCATCGGGT...CAGTGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| 3UTR CAA 72 bp | GGGTTTTGCACACCACGTACGTTCCCAGTTCAGACCTaGAGCAGGGACTACATCGAAAGCACAGAATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GFCTPRTFPVQT*SRDYIESTESP Trigger: TGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTGAACTGGGAACGTACGTGGTGTGCAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | GTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATAGCCGACGGGCACACCTaGAGGGGGTCTTTGGATACG | + |
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Preference number: 4 (lower is better) Translates to: VLKRIMHQDMYRKQVLWIADGHT*RGSLDT Trigger: CGTATCCAAAGACCCCCTCCAGGTGTGCCCGTCGGC...TATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | CAGACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCAATGAAGTCAGGCTTTaGTTCAATCTCCTTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: QTLSRDYIESTESPRPIFNEVRL*FNLLHG Trigger: GCCATGAAGGAGATTGAACCAAAGCCTGACTTCATT...GAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | GAAGAAATTGTGCTTCTTAGCGCCCTCTCTGGTGAATCCAGGTGTCCCATCCCAATAGACTTTAGTGTCTaGAAAGACTTCCTTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: EEIVLLSALSGESRCPIPIDFSV*KDFLDE Trigger: CTCATCAAGGAAGTCTTTCCAGACACTAAAGTCTAT...TGGGATGGGACACCTGGATTCACCAGAGAGGGCGCTAAGAAGCACAATTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | TGTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATCTCCTGCTCCCACCGTaGGGTCTCTTGTACATTCGC | + |
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Preference number: 4 (lower is better) Translates to: CIKANNAPRHVPQTSFVDLLLPP*GLLYIR Trigger: GCGAATGTACAAGAGACCCCACGGTGGGAGCAGGAG...ATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | GTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATAGGGTCTCCACAGCTCTaGCACCTGGTTATAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: VLKRIMHQDMYRKQVLWIGSPQL*HLVIDA Trigger: CGCATCTATAACCAGGTGGCAGAGCTGTGGAGACCC...TATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | GTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATAAACCCCGGGGGCACGTaGCCAATAACATACACCATC | + |
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Preference number: 4 (lower is better) Translates to: VLKRIMHQDMYRKQVLWINPGGT*PITYTI Trigger: GATGGTGTATGTTATTGGCCACGTGCCCCCGGGGTT...TATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | GTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATATGGTGTCCAAAGAACTaGCCTGCTATGACCCGATGG | + |
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Preference number: 4 (lower is better) Translates to: VLKRIMHQDMYRKQVLWIWCPKN*PAMTRW Trigger: CCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCA...TATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | GTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATACCTGCTATGACCCGATaGTGCTTCTGGATCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: VLKRIMHQDMYRKQVLWIPAMTR*CFWITF Trigger: GAAGGTGATCCAGAAGCACCATCGGGTCATAGCAGG...TATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | TGTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATTCCAAAGAACTGCCCTaGTATGACCCGATGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CIKANNAPRHVPQTSFVDSKELP*YDPMVL Trigger: AAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGA...ATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATAAAAAGCTGTCGGTATGGTaGTGTCCAAAGAACTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: IKANNAPRHVPQTSFVDKKLSVW*CPKNCP Trigger: AGGGCAGTTCTTTGGACACCACCATACCGACAGCTT...TTTATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR GCA 90 bp | TGTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATCTGTCTGCTCGTTGTTaGTGTAGTACAGATTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CIKANNAPRHVPQTSFVDLSARC*CSTDWC Trigger: ACACCAATCTGTACTACAGCAACAACGAGCAGACAG...ATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS TCA 90 bp | TGTGAGGCTCACTGGCAATGCGGGTCAGCGCCGTGTGCATGGAGCTaGCGCTGGCATCCGGCACCTGGTAGGCCTCCGTCAGGCGGTACT | + |
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Preference number: 5 (lower is better) Translates to: CEAHWQCGSAPCAWS*RWHPAPGRPPSGGT Trigger: AGTACCGCCTGACGGAGGCCTACCAGGTGCCGGATGCCAGCGTCAGCTCCATGCACACGGCGCTGACCCGCATTGCCAGTGAGCCTCACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 90 bp | GCACAGGCTGGGAGCCGGCCGACGGGCACACCTGGAGGGGGTCTTTaGATACGGTGTAGTTGGGGTCCAGATGCAGGTCGGAGATGTGCC | + |
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Preference number: 5 (lower is better) Translates to: AQAGSRPTGTPGGGL*IRCSWGPDAGRRCA Trigger: GGCACATCTCCGACCTGCATCTGGACCCCAACTACACCGTATCCAAAGACCCCCTCCAGGTGTGCCCGTCGGCCGGCTCCCAGCCTGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 90 bp | CGGCCGACGGGCACACCTGGAGGGGGTCTTTGGATACGGTGTAGTTaGGGTCCAGATGCAGGTCGGAGATGTGCCAGAACCTCCCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: RPTGTPGGGLWIRCS*GPDAGRRCARTSLV Trigger: AACTAGGGAGGTTCTGGCACATCTCCGACCTGCATCTGGACCCCAACTACACCGTATCCAAAGACCCCCTCCAGGTGTGCCCGTCGGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 90 bp | CGGCACCTGGTAGGCCTCCGTCAGGCGGTACTCCTGCTCCCACCGTaGGGTCTCTTGTACATTCGCCTGCCTCAGGTTCAAGAAGTAAGT | + |
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Preference number: 5 (lower is better) Translates to: RHLVGLRQAVLLLPP*GLLYIRLPQVQEVS Trigger: ACTTACTTCTTGAACCTGAGGCAGGCGAATGTACAAGAGACCCCACGGTGGGAGCAGGAGTACCGCCTGACGGAGGCCTACCAGGTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 90 bp | GGGTCTCCACAGCTCTGCCACCTGGTTATAGATGCGGTTGCTCTGTaGTGGGAACTGGTTCTTAGGGTGGAAGTCATGATTTCCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: GSPQLCHLVIDAVAL*WELVLRVEVMISQS Trigger: GCTCTGGGAAATCATGACTTCCACCCTAAGAACCAGTTCCCAGCACAGAGCAACCGCATCTATAACCAGGTGGCAGAGCTGTGGAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 90 bp | TCTCCACAGCTCTGCCACCTGGTTATAGATGCGGTTGCTCTGTGCTaGGAACTGGTTCTTAGGGTGGAAGTCATGATTTCCCAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SPQLCHLVIDAVALC*ELVLRVEVMISQSS Trigger: GCTGCTCTGGGAAATCATGACTTCCACCCTAAGAACCAGTTCCCAGCACAGAGCAACCGCATCTATAACCAGGTGGCAGAGCTGTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CAA 90 bp | CAGACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCATGCGTATCCCTGGATaGTTGGCCCCATCGACCACT | + |
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Preference number: 5 (lower is better) Translates to: QTLSRDYIESTESPRPIFMRIPG*LAPSTT Trigger: AGTGGTCGATGGGGCCAACAATCCAGGGATACGCAT...GAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS TCA 90 bp | CGTGCTCGATGCGGCAGCTGTCCTCACAGGTCAAATGGTTGTAGCTaGCCGAGTTATAGACGTAATAACGTTGCAGGATGTGAGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: RARCGSCPHRSNGCS*PSYRRNNVAGCEAH Trigger: GTGAGCCTCACATCCTGCAACGTTATTACGTCTATAACTCGGTCAGCTACAACCATTTGACCTGTGAGGACAGCTGCCGCATCGAGCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 90 bp | TCGGTATGGTGGTGTCCAAAGAACTGCCCTGCTATGACCCGATGGTaGTTCTGGATCACCTTCAGATACTCCTCATTGAAGCTCTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: SVWWCPKNCPAMTRW*FWITFRYSSLKLSR Trigger: CCGAGAGAGCTTCAATGAGGAGTATCTGAAGGTGATCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCACCATACCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 90 bp | GACGTGCGGTGTGTCGTCCCCTGTCCAGAGAATGAAGTCAGGCTTTaGTTCAATCTCCTTCATGGCATACAAGGACGAGTTGATAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: DVRCVVPCPENEVRL*FNLLHGIQGRVDKG Trigger: GCCCTTATCAACTCGTCCTTGTATGCCATGAAGGAGATTGAACCAAAGCCTGACTTCATTCTCTGGACAGGGGACGACACACCGCACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 90 bp | TGGTGGTGTCCAAAGAACTGCCCTGCTATGACCCGATGGTGCTTCTaGATCACCTTCAGATACTCCTCATTGAAGCTCTCTCGGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: WWCPKNCPAMTRWCF*ITFRYSSLKLSRNQ Trigger: CTGGTTCCGAGAGAGCTTCAATGAGGAGTATCTGAAGGTGATCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CAA 90 bp | TACGTTCCCAGTTCAGACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCTCAAGCGTTCCACAATaGCCAGCACAGCTGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: YVPSSDLEQGLHRKHRISSSVPQ*PAQLPL Trigger: GAGAGGCAGCTGTGCTGGCAATTGTGGAACGCTTGA...GGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTCTGAACTGGGAACGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 90 bp | CTGTCGGTATGGTGGTGTCCAAAGAACTGCCCTGCTATGACCCGATaGTGCTTCTGGATCACCTTCAGATACTCCTCATTGAAGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LSVWWCPKNCPAMTR*CFWITFRYSSLKLS Trigger: AGAGAGCTTCAATGAGGAGTATCTGAAGGTGATCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCACCATACCGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CAA 90 bp | ACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCGTCGGCTCACTTCATCTCGGAACCAGGCCTaGTTCTGTGTCTTCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: TTSKAQNLQGPSSRRLTSSRNQA*FCVFSK Trigger: CTTTGAGAAGACACAGAACAAGGCCTGGTTCCGAGA...TGAAGTGAGCCGACGGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CAA 90 bp | GACCTTGAGCAGGGACTACATCGAAAGCACAGAATCTCCAAGGCCCATCTTCCCACTTCCTTGATGAGGTaGGTCAAGCGTTCCACAATT | + |
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Preference number: 5 (lower is better) Translates to: DLEQGLHRKHRISKAHLPTSLMR*VKRSTI Trigger: AATTGTGGAACGCTTGACCAACCTCATCAAGGAAGT...GGGAAGATGGGCCTTGGAGATTCTGTGCTTTCGATGTAGTCCCTGCTCAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS-3UTR CAA 90 bp | TGTATTAAAGCGAATAATGCACCAAGACATGTACCGCAAACAAGTTTTGTGGATTCTGGAAAGACTTCCTaGATGAGGTTGGTCAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: CIKANNAPRHVPQTSFVDSGKTS*MRLVKR Trigger: ACGCTTGACCAACCTCATCAAGGAAGTCTTTCCAGA...ATCCACAAAACTTGTTTGCGGTACATGTCTTGGTGCATTATTCGCTTTAATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS TCA 72 bp | CACTGGCAATGCGGGTCAGCGCCGTGTGCATGGAGCTaGCGCTGGCATCCGGCACCTGGTAGGCCTCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: HWQCGSAPCAWS*RWHPAPGRPPS Trigger: TGACGGAGGCCTACCAGGTGCCGGATGCCAGCGTCAGCTCCATGCACACGGCGCTGACCCGCATTGCCAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 72 bp | GGGAGCCGGCCGACGGGCACACCTGGAGGGGGTCTTTaGATACGGTGTAGTTGGGGTCCAGATGCAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: GSRPTGTPGGGL*IRCSWGPDAGR Trigger: CCGACCTGCATCTGGACCCCAACTACACCGTATCCAAAGACCCCCTCCAGGTGTGCCCGTCGGCCGGCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 72 bp | GATGCATTGCTCAGGACATCTCCCAGCCACCGGAACTaGTCGCCGGGGTCAGCCATGCCAGCTGTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: DALLRTSPSHRN*SPGSAMPAVCS Trigger: CGAGCAGACAGCTGGCATGGCTGACCCCGGCGAGCAGTTCCGGTGGCTGGGAGATGTCCTGAGCAATGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 72 bp | GTAGGCCTCCGTCAGGCGGTACTCCTGCTCCCACCGTaGGGTCTCTTGTACATTCGCCTGCCTCAGGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: VGLRQAVLLLPP*GLLYIRLPQVQ Trigger: TTGAACCTGAGGCAGGCGAATGTACAAGAGACCCCACGGTGGGAGCAGGAGTACCGCCTGACGGAGGCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS TCA 72 bp | CTGTCTGCTCGTTGTTGCTGTAGTACAGATTGGTGTTaGGGACCACAACTCGCCCCGCCCTGCTGGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: LSARCCCSTDWC*GPQLAPPCWDP Trigger: CGGGTCCCAGCAGGGCGGGGCGAGTTGTGGTCCTCAACACCAATCTGTACTACAGCAACAACGAGCAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 72 bp | GGCACACCTGGAGGGGGTCTTTGGATACGGTGTAGTTaGGGTCCAGATGCAGGTCGGAGATGTGCCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: GTPGGGLWIRCS*GPDAGRRCART Trigger: GGTTCTGGCACATCTCCGACCTGCATCTGGACCCCAACTACACCGTATCCAAAGACCCCCTCCAGGTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 72 bp | CAATTGCCAGCACAGCTGCCTCTCCTAGACTCTCATTaGGGACGTGCGGTGTGTCGTCCCCTGTCCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: QLPAQLPLLDSH*GRAVCRPLSRE Trigger: TTCTCTGGACAGGGGACGACACACCGCACGTCCCCAATGAGAGTCTAGGAGAGGCAGCTGTGCTGGCAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 72 bp | ACAATTGCCAGCACAGCTGCCTCTCCTAGACTCTCATaGGGGACGTGCGGTGTGTCGTCCCCTGTCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TIASTAASPRLS*GTCGVSSPVQR Trigger: TCTCTGGACAGGGGACGACACACCGCACGTCCCCAATGAGAGTCTAGGAGAGGCAGCTGTGCTGGCAATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 72 bp | AGCACAGCTGCCTCTCCTAGACTCTCATTGGGGACGTaGGGTGTGTCGTCCCCTGTCCAGAGAATGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: STAASPRLSLGT*GVSSPVQRMKS Trigger: TGACTTCATTCTCTGGACAGGGGACGACACACCGCACGTCCCCAATGAGAGTCTAGGAGAGGCAGCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 90 bp | AAGCGTTCCACAATTGCCAGCACAGCTGCCTCTCCTAGACTCTCATaGGGGACGTGCGGTGTGTCGTCCCCTGTCCAGAGAATGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: KRSTIASTAASPRLS*GTCGVSSPVQRMKS Trigger: TGACTTCATTCTCTGGACAGGGGACGACACACCGCACGTCCCCAATGAGAGTCTAGGAGAGGCAGCTGTGCTGGCAATTGTGGAACGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 72 bp | GTGGCCAATAACATACACCATCTCCCCATCCCGAGATaGATTGCTCAGGACATCTCCCAGCCACCGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: VANNIHHLPIPR*IAQDISQPPEL Trigger: CAGTTCCGGTGGCTGGGAGATGTCCTGAGCAATGCATCTCGGGATGGGGAGATGGTGTATGTTATTGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 72 bp | CCAATAACATACACCATCTCCCCATCCCGAGATGCATaGCTCAGGACATCTCCCAGCCACCGGAACTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PITYTISPSRDA*LRTSPSHRNCS Trigger: CGAGCAGTTCCGGTGGCTGGGAGATGTCCTGAGCAATGCATCTCGGGATGGGGAGATGGTGTATGTTATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 72 bp | GAAGCTGTCGGTATGGTGGTGTCCAAAGAACTGCCCTaGTATGACCCGATGGTGCTTCTGGATCACCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: EAVGMVVSKELP*YDPMVLLDHLQ Trigger: CTGAAGGTGATCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCACCATACCGACAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 72 bp | ATTCGGAAGCTGTCGGTATGGTGGTGTCCAAAGAACTaGCCTGCTATGACCCGATGGTGCTTCTGGATCACC | + |
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Preference number: 6 (lower is better) Translates to: IRKLSVWWCPKN*PAMTRWCFWIT Trigger: GGTGATCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCACCATACCGACAGCTTCCGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 72 bp | AGATACTCCTCATTGAAGCTCTCTCGGAACCAGGCCTaGTTCTGTGTCTTCTCAAAGAACCCCGGGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: RYSSLKLSRNQA*FCVFSKNPGGT Trigger: CGTGCCCCCGGGGTTCTTTGAGAAGACACAGAACAAGGCCTGGTTCCGAGAGAGCTTCAATGAGGAGTATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 72 bp | GTGGCTCGATCATACTCGAAAATGCGTATCCCTGGATaGTTGGCCCCATCGACCACTCCAGGTAATGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VARSYSKMRIPG*LAPSTTPGNVV Trigger: GACCACATTACCTGGAGTGGTCGATGGGGCCAACAATCCAGGGATACGCATTTTCGAGTATGATCGAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 90 bp | ATCACCTTCAGATACTCCTCATTGAAGCTCTCTCGGAACCAGGCCTaGTTCTGTGTCTTCTCAAAGAACCCCGGGGGCACGTGGCCAATA | + |
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Preference number: 6 (lower is better) Translates to: ITFRYSSLKLSRNQA*FCVFSKNPGGTWPI Trigger: TATTGGCCACGTGCCCCCGGGGTTCTTTGAGAAGACACAGAACAAGGCCTGGTTCCGAGAGAGCTTCAATGAGGAGTATCTGAAGGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 90 bp | TTGAGTGTGGCTCGATCATACTCGAAAATGCGTATCCCTGGATTGTaGGCCCCATCGACCACTCCAGGTAATGTGGTCTTCCACGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSVARSYSKMRIPGL*APSTTPGNVVFHGV Trigger: CACACCGTGGAAGACCACATTACCTGGAGTGGTCGATGGGGCCAACAATCCAGGGATACGCATTTTCGAGTATGATCGAGCCACACTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 90 bp | ACAGGTCAAATGGTTGTAGCTGACCGAGTTATAGACGTAATAACGTaGCAGGATGTGAGGCTCACTGGCAATGCGGGTCAGCGCCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TGQMVVADRVIDVIT*QDVRLTGNAGQRRV Trigger: CACACGGCGCTGACCCGCATTGCCAGTGAGCCTCACATCCTGCAACGTTATTACGTCTATAACTCGGTCAGCTACAACCATTTGACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 90 bp | AAGTTGAGTGTGGCTCGATCATACTCGAAAATGCGTATCCCTGGATaGTTGGCCCCATCGACCACTCCAGGTAATGTGGTCTTCCACGGT | + |
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Preference number: 6 (lower is better) Translates to: KLSVARSYSKMRIPG*LAPSTTPGNVVFHG Trigger: ACCGTGGAAGACCACATTACCTGGAGTGGTCGATGGGGCCAACAATCCAGGGATACGCATTTTCGAGTATGATCGAGCCACACTCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 72 bp | CAGCTCTGCCACCTGGTTATAGATGCGGTTGCTCTGTaGTGGGAACTGGTTCTTAGGGTGGAAGTCATGATT | + |
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Preference number: 6 (lower is better) Translates to: QLCHLVIDAVAL*WELVLRVEVMI Trigger: AATCATGACTTCCACCCTAAGAACCAGTTCCCAGCACAGAGCAACCGCATCTATAACCAGGTGGCAGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 72 bp | TGGTGGTGTCCAAAGAACTGCCCTGCTATGACCCGATaGTGCTTCTGGATCACCTTCAGATACTCCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: WWCPKNCPAMTR*CFWITFRYSSL Trigger: CAATGAGGAGTATCTGAAGGTGATCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CCA 72 bp | CTCGATCATACTCGAAAATGCGTATCCCTGGATTGTTaGCCCCATCGACCACTCCAGGTAATGTGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LDHTRKCVSLDC*PHRPLQVMWSS Trigger: GGAAGACCACATTACCTGGAGTGGTCGATGGGGCCAACAATCCAGGGATACGCATTTTCGAGTATGATCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 72 bp | GCTCGATCATACTCGAAAATGCGTATCCCTGGATTGTaGGCCCCATCGACCACTCCAGGTAATGTGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ARSYSKMRIPGL*APSTTPGNVVF Trigger: GAAGACCACATTACCTGGAGTGGTCGATGGGGCCAACAATCCAGGGATACGCATTTTCGAGTATGATCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS GCA 72 bp | TGGTGTCCAAAGAACTGCCCTGCTATGACCCGATGGTaGTTCTGGATCACCTTCAGATACTCCTCATTGAAG | + |
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Preference number: 6 (lower is better) Translates to: WCPKNCPAMTRW*FWITFRYSSLK Trigger: CTTCAATGAGGAGTATCTGAAGGTGATCCAGAAGCACCATCGGGTCATAGCAGGGCAGTTCTTTGGACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 72 bp | ATGGTTGTAGCTGACCGAGTTATAGACGTAATAACGTaGCAGGATGTGAGGCTCACTGGCAATGCGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: MVVADRVIDVIT*QDVRLTGNAGQ Trigger: CTGACCCGCATTGCCAGTGAGCCTCACATCCTGCAACGTTATTACGTCTATAACTCGGTCAGCTACAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS CAA 72 bp | ATGCAAGCAGGTAGCATAAGTGTTGAAAGCCACGTGTaGTATAGCACAAACGTGCTCGATGCGGCAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: MQAGSISVESHV*YSTNVLDAAAV Trigger: GACAGCTGCCGCATCGAGCACGTTTGTGCTATACAACACGTGGCTTTCAACACTTATGCTACCTGCTTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS TCA 72 bp | TGCGGCAGCTGTCCTCACAGGTCAAATGGTTGTAGCTaGCCGAGTTATAGACGTAATAACGTTGCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: CGSCPHRSNGCS*PSYRRNNVAGC Trigger: ACATCCTGCAACGTTATTACGTCTATAACTCGGTCAGCTACAACCATTTGACCTGTGAGGACAGCTGCCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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| CDS TCA 72 bp | TCAGGTTCAAGAAGTAAGTCACCAAGTCCTTCAAGTTaGGTGTGGCTCGATCATACTCGAAAATGCGTATCC | + |
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Preference number: 6 (lower is better) Translates to: SGSRSKSPSPSS*VWLDHTRKCVS Trigger: GGATACGCATTTTCGAGTATGATCGAGCCACACTCAACTTGAAGGACTTGGTGACTTACTTCTTGAACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030709.9 |
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