Pregenerated sensors for SMPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037049Ensembl transcript IDs: ENSMUST00000046983.10
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACACTTGTTTCCCTGGCCTaGCTGGCTCCTTCCCCCGAA | + |
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Preference number: 2 (lower is better) Translates to: PGQTSAPGVIQILGISRTLVSLA*LAPSPE Trigger: TTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAG...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| 3UTR-3UTR TCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGCCCTTTTCTGATACATaGACTTTCCCCAGTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: AACFPGLAGSFPRSFCLRPFSDT*TFPSLE Trigger: TTCCAGACTGGGGAAAGTTCATGTATCAGAAAAGGG...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAAATGTATCCCTTTTCTaGTACATGAACTTTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGQTSAPGVIQILGISRTNVSLF*YMNFPQ Trigger: CTGGGGAAAGTTCATGTATCAGAAAAGGGATACATT...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | TCTCATGAGGCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTGGCACCGGGGGCTGGTaGGCTCGGTGGCTTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SHEAACFPGLAGSFPRSFGTGGW*ARWLWG Trigger: CCCCCAAAGCCACCGAGCCCACCAGCCCCCGGTGCC...AAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGCCTCATGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGCCCCCTTCTGGGAGTTaGGTGGCCATCCGGACCCCC | + |
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Preference number: 4 (lower is better) Translates to: AACFPGLAGSFPRSFCLRPPSGS*VAIRTP Trigger: GGGGGTCCGGATGGCCACCCAACTCCCAGAAGGGGG...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGGCTCGGGCTGAGAGCTaGGCACACAGAGTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AACFPGLAGSFPRSFCLRARAES*AHRVAR Trigger: CCTGGCCACTCTGTGTGCCCAGCTCTCAGCCCGAGC...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGTGTGCCGCAGGGCTCTaGAGGTGGGTGGCCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: AACFPGLAGSFPRSFCLRCAAGL*RWVALM Trigger: CATAAGGGCCACCCACCTTCAGAGCCCTGCGGCACA...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCGCTCCCAGCCGGCTCTaGGGTGGTCCTGGCCGGATG | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAAPSRL*GGPGRM Trigger: CATCCGGCCAGGACCACCTCAGAGCCGGCTGGGAGC...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR GCA 90 bp | TCTCATGAGGCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTGACCTCTCCAGTCTCTaGTCCCAGCCGGCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SHEAACFPGLAGSFPRSFDLSSL*SQPALR Trigger: CCTCAGAGCCGGCTGGGAGCAGAGACTGGAGAGGTC...AAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGCCTCATGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCAGGGGCACCGGGGGCTaGTGGGCTCGGTGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLARGTGG*WARWLW Trigger: CCAAAGCCACCGAGCCCACCAGCCCCCGGTGCCCCT...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGCCGGCGGCAGCAAAGTaGATCTGCACAGTAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AACFPGLAGSFPRSFCLRPAAAK*ICTVRV Trigger: GACCCTTACTGTGCAGATCCACTTTGCTGCCGCCGG...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGGCGGAGGCCAGGGCGTaGGGTGAGGGCATAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPGQTSAPGVIQILGISRAEARA*GEGIEA Trigger: GGCTTCTATGCCCTCACCCCACGCCCTGGCCTCCGC...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGCACAGCAGGGTACACTaGCACTGGGCCCAAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: AACFPGLAGSFPRSFCLRHSRVH*HWAQEL Trigger: AAGTTCTTGGGCCCAGTGCCAGTGTACCCTGCTGTG...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAGCTGGGCACACAGAGTaGCCAGGCGGCAGGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PGQTSAPGVIQILGISRTAGHTE*PGGRVC Trigger: GCACACCCTGCCGCCTGGCCACTCTGTGTGCCCAGC...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGTGTTGCCAGACATCATaGGCAGGGATATCTCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: AACFPGLAGSFPRSFCLRCCQTS*AGISPV Trigger: GACGGGAGATATCCCTGCCCATGATGTCTGGCAACA...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGCGATTCTCAGCAGCCTaGAGCTCCTCCACCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SPGQTSAPGVIQILGISRRFSAA*SSSTSH Trigger: GTGGCTGGTGGAGGAGCTTCAGGCTGCTGAGAATCG...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAGCTGTCTGCTCGGGCTaGGAGCTGGGCACACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGQTSAPGVIQILGISRTAVCSG*ELGTQS Trigger: ACTCTGTGTGCCCAGCTCTCAGCCCGAGCAGACAGC...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR GCA 90 bp | TCTCATGAGGCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTGCTCATCATCCCTCATaGGGTAGACCAGGTTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SHEAACFPGLAGSFPRSFAHHPS*GRPGCA Trigger: GGCACAACCTGGTCTACCGCATGAGGGATGATGAGC...AAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGCCTCATGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGATTGGTTTCCCTTTATaGAGGGAGGAGGGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: AACFPGLAGSFPRSFCLRIGFPL*REEGSH Trigger: ATGGCTTCCCTCCTCCCTTCATAAAGGGAAACCAAT...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR GCA 90 bp | TCTCATGAGGCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTAAGGTCTGGAAGAGTTaGTCATCATCCCTCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: SHEAACFPGLAGSFPRSFKVWKS*SSSLMR Trigger: CCGCATGAGGGATGATGAGCAACTCTTCCAGACCTT...AAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGCCTCATGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGAGGGTTCCCATGCCTTaGCCATGGCTTCATAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPGQTSAPGVIQILGISRRVPMP*PWLHRA Trigger: GGCTCTATGAAGCCATGGCCAAGGCATGGGAACCCT...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGTCCTCCACCAGCCACTaGAGTTGTCCAGCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: SPGQTSAPGVIQILGISRSSTSH*SCPAGS Trigger: AGATCCTGCTGGACAACTCCAGTGGCTGGTGGAGGA...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACACTGGGAGGCTCCCATTaGGCATCAAGTGGCGACACA | + |
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Preference number: 4 (lower is better) Translates to: PGQTSAPGVIQILGISRTLGGSH*ASSGDT Trigger: TGTGTCGCCACTTGATGCCCAATGGGAGCCTCCCAG...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCGGGTGGCTTCGGCACTaGTGGCAAAGAGATGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAGWLRH*WQRDVP Trigger: TGGAACATCTCTTTGCCATCAGTGCCGAAGCCACCC...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCGAGGAGGGAAGCCATTaGCAGGAGTGCTCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAEEGSH*QECSHG Trigger: ACCATGAGAGCACTCCTGTCAATGGCTTCCCTCCTC...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR GCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAGAGTGCTCTCATGGTTaGCCACAGCAGGGTACACTG | + |
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Preference number: 4 (lower is better) Translates to: PGQTSAPGVIQILGISRTECSHG*PQQGTL Trigger: CAGTGTACCCTGCTGTGGGCAACCATGAGAGCACTC...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCAGGGTACACTGGCACTaGGCCCAAGAACTTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLARVHWH*AQELPH Trigger: GTGAGGAAGTTCTTGGGCCCAGTGCCAGTGTACCCT...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAACAGGAGTGCTCTCATaGTTGCCCACAGCAGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: PGQTSAPGVIQILGISRTTGVLS*LPTAGY Trigger: GTACCCTGCTGTGGGCAACCATGAGAGCACTCCTGT...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCGCATCTTGCATATCTTaGTGGCCACAGAGCCTACCC | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAASCIS*WPQSLP Trigger: GGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGC...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCGTGTGGCCAAAGAACTaGCCGGCCAGAGTGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAVWPKN*PARVFS Trigger: TGAAAACACTCTGGCCGGTCAGTTCTTTGGCCACAC...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGCCCTCCAGGTACTCATaGTCCCAGTGTAGATCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SPGQTSAPGVIQILGISRPSRYS*SQCRSV Trigger: TACTGATCTACACTGGGACCATGAGTACCTGGAGGG...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCCCCATGCCTTGGCCATaGCTTCATAGAGCCATTGTG | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAPMPWP*LHRAIV Trigger: CACAATGGCTCTATGAAGCCATGGCCAAGGCATGGG...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | TCTCATGAGGCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTAGAAACCAGAAGGTCTaGAAGAGTTGCTCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: SHEAACFPGLAGSFPRSFRNQKV*KSCSSS Trigger: GGATGATGAGCAACTCTTCCAGACCTTCTGGTTTCT...AAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGCCTCATGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCCCAATTCTTAGGGTGTaGAGGGCATCAGCTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAPILRV*RASAGN Trigger: GTTACCAGCTGATGCCCTTCACACCCTAAGAATTGG...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCGAAGAGGATAAGCTCTaGCAGGAACCCAAAGAACCG | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAEEDKL*QEPKEP Trigger: CGGTTCTTTGGGTTCCTGCCAGAGCTTATCCTCTTC...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGTGTCCTGGAGGGATGTaGCCAATTATATGCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: SPGQTSAPGVIQILGISRCPGGM*PIICTL Trigger: CAAAGTGCATATAATTGGCCACATCCCTCCAGGACA...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCCAGGATCTGTGGAGTTaGTCAAGAGCCAAAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAQDLWS*SRAKSS Trigger: AGAACTTTTGGCTCTTGATCAACTCCACAGATCCTG...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCTCCTTCTTCAGCCCATaGTTGAGAGCAGTGAATAAG | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLASFFSP*LRAVNK Trigger: CTTATTCACTGCTCTCAACCATGGGCTGAAGAAGGA...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACACTGAATTTGACAGAATaGCCTTCAGAAGGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGQTSAPGVIQILGISRTLNLTE*PSEGRG Trigger: TCCTCTTCCTTCTGAAGGCCATTCTGTCAAATTCAG...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCCTTAAGACAATGTCCTaGAGGGATGTGGCCAATTAT | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLALKTMS*RDVANY Trigger: ATAATTGGCCACATCCCTCCAGGACATTGTCTTAAG...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR GCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCATGTGGCCAATTATATaGACTTTGTCTCCTCGATTC | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLAMWPII*TLSPRF Trigger: GAATCGAGGAGACAAAGTGCATATAATTGGCCACAT...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCAGCCATTGTGAAGATTaGTTTCCCTTTATGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TSSSVTKQALMRRLVSLASHCED*FPFMKG Trigger: TCCCTTCATAAAGGGAAACCAATCTTCACAATGGCT...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 90 bp | CTCGGGCTGAGAGCTGGGCACACAGAGTGGCCAGGCGGCAGGGTGTaGCGCAGGGCTCTGAAGGTGGGTGGCCCTTATGGTAGAGAAACC | + |
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Preference number: 5 (lower is better) Translates to: LGLRAGHTEWPGGRV*RRALKVGGPYGRET Trigger: GGTTTCTCTACCATAAGGGCCACCCACCTTCAGAGCCCTGCGGCACACCCTGCCGCCTGGCCACTCTGTGTGCCCAGCTCTCAGCCCGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 90 bp | ATTGGGCATCAAGTGGCGACACAAAGCAGGGCTGTCTGCTCGGGCTaGGAGCTGGGCACACAGAGTGGCCAGGCGGCAGGGTGTGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: IGHQVATQSRAVCSG*ELGTQSGQAAGCAA Trigger: TGCGGCACACCCTGCCGCCTGGCCACTCTGTGTGCCCAGCTCTCAGCCCGAGCAGACAGCCCTGCTTTGTGTCGCCACTTGATGCCCAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 90 bp | CAAAGGAGTCCCACTCTGGGTGCCGGTAAGGACCTCTCCAGTCTCTaGTCCCAGCCGGCTCTGAGGTGGTCCTGGCCGGATGATGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: QRSPTLGAGKDLSSL*SQPALRWSWPDDAL Trigger: CAGAGCATCATCCGGCCAGGACCACCTCAGAGCCGGCTGGGAGCAGAGACTGGAGAGGTCCTTACCGGCACCCAGAGTGGGACTCCTTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 90 bp | GGAGTTGGGTGGCCATCCGGACCCCCGGCGGCAGCAAAGTGGATCTaGACAGTAAGGGTCTGTGCCCTCCAGGTACTCATGGTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVGWPSGPPAAAKWI*TVRVCALQVLMVPV Trigger: CACTGGGACCATGAGTACCTGGAGGGCACAGACCCTTACTGTGCAGATCCACTTTGCTGCCGCCGGGGGTCCGGATGGCCACCCAACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 90 bp | CTGGGCACACAGAGTGGCCAGGCGGCAGGGTGTGCCGCAGGGCTCTaGAGGTGGGTGGCCCTTATGGTAGAGAAACCAGAAGGTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGTQSGQAAGCAAGL*RWVALMVEKPEGLE Trigger: TTCCAGACCTTCTGGTTTCTCTACCATAAGGGCCACCCACCTTCAGAGCCCTGCGGCACACCCTGCCGCCTGGCCACTCTGTGTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | CTTCTGGGAGTTGGGTGGCCATCCGGACCCCCGGCGGCAGCAAAGTaGATCTGCACAGTAAGGGTCTGTGCCCTCCAGGTACTCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGVGWPSGPPAAAK*ICTVRVCALQVLMV Trigger: GACCATGAGTACCTGGAGGGCACAGACCCTTACTGTGCAGATCCACTTTGCTGCCGCCGGGGGTCCGGATGGCCACCCAACTCCCAGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | ACCTCCTCCAGTGTAACCAAACAAGCTCTCATGAGGCGGCTTGTTTCCCTGGCCGCCCCCTTCTGGGAGTaGGGTGGCCATCCGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSSVTKQALMRRLVSLAAPFWE*GGHPDP Trigger: GGGGTCCGGATGGCCACCCAACTCCCAGAAGGGGGC...GGCCAGGGAAACAAGCCGCCTCATGAGAGCTTGTTTGGTTACACTGGAGGAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGGGAGTGCTCTCATGGTaGCCCACAGCAGGGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: AACFPGLAGSFPRSFCLRGVLSW*PTAGYT Trigger: AGTGTACCCTGCTGTGGGCAACCATGAGAGCACTCC...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGCACCAGCCACTGGAGTaGTCCAGCAGGATCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AACFPGLAGSFPRSFCLRHQPLE*SSRICG Trigger: TCCACAGATCCTGCTGGACAACTCCAGTGGCTGGTG...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | TCTCATGAGGCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTCCTACCCGTGCCACATaGGGCTCCTTCTTCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHEAACFPGLAGSFPRSFPTRAT*GSFFSP Trigger: TGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGG...AAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGCCTCATGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAGTGGGCTCGGTGGCTTaGGGGGTGGCTTCGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PGQTSAPGVIQILGISRTVGSVA*GVASAL Trigger: CAGTGCCGAAGCCACCCCCAAAGCCACCGAGCCCAC...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | TCTCATGAGGCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTGTGCCTCCTGCTGCGTaGGCCTGGGTCAGATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHEAACFPGLAGSFPRSFVPPAA*AWVRFK Trigger: CTTGAATCTGACCCAGGCCAACGCAGCAGGAGGCAC...AAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGCCTCATGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 90 bp | CAGGGTACACTGGCACTGGGCCCAAGAACTTCCTCACGAGGTCTGTaGTGGTGGTCAGGGCCCTCAGCTGATCTTGGCGAGACTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGTLALGPRTSSRGL*WWSGPSADLGETVA Trigger: GGCAACAGTCTCGCCAAGATCAGCTGAGGGCCCTGACCACCATCACAGACCTCGTGAGGAAGTTCTTGGGCCCAGTGCCAGTGTACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | GACAGGAGTGCTCTCATGGTTGCCCACAGCAGGGTACACTGGCACTaGGCCCAAGAACTTCCTCACGAGGTCTGTGATGGTGGTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DRSALMVAHSRVHWH*AQELPHEVCDGGQG Trigger: GCCCTGACCACCATCACAGACCTCGTGAGGAAGTTCTTGGGCCCAGTGCCAGTGTACCCTGCTGTGGGCAACCATGAGAGCACTCCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | GAGCCCTGTAGAGGCGCTTCCAGCTTGGTGTGCCTCCTGCTGCGTTaGCCTGGGTCAGATTCAAGATGTAGGTCTCGTGGTCCAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: EPCRGASSLVCLLLR*PGSDSRCRSRGPGP Trigger: TGGTCCTGGACCACGAGACCTACATCTTGAATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 90 bp | TTCTCGAGCCCTGTAGAGGCGCTTCCAGCTTGGTGTGCCTCCTGCTaGGTTGGCCTGGGTCAGATTCAAGATGTAGGTCTCGTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSSPVEALPAWCASC*VGLGQIQDVGLVVQ Trigger: CTGGACCACGAGACCTACATCTTGAATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCTCGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 90 bp | GGTTTCTCGAGCCCTGTAGAGGCGCTTCCAGCTTGGTGTGCCTCCTaGTGCGTTGGCCTGGGTCAGATTCAAGATGTAGGTCTCGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GFSSPVEALPAWCAS*CVGLGQIQDVGLVV Trigger: GACCACGAGACCTACATCTTGAATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCTCGAGAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | CCTCATGCGGTAGACCAGGTTGTGCCAGGAGGCAGGCATCGCATCTaGAAGTCCATAGGTTTCTCGAGCCCTGTAGAGGCGCTTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHAVDQVVPGGRHRI*KSIGFSSPVEALPA Trigger: AGCTGGAAGCGCCTCTACAGGGCTCGAGAAACCTATGGACTTCCAGATGCGATGCCTGCCTCCTGGCACAACCTGGTCTACCGCATGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | GCCACAGAGCCTACCCGTGCCACATTGGGCTCCTTCTTCAGCCCATaGTTGAGAGCAGTGAATAAGACTTTGCAGGCGGGGCAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATEPTRATLGSFFSP*LRAVNKTLQAGQVR Trigger: CCTCACTTGCCCCGCCTGCAAAGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | GCCATTGACAGGAGTGCTCTCATGGTTGCCCACAGCAGGGTACACTaGCACTGGGCCCAAGAACTTCCTCACGAGGTCTGTGATGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AIDRSALMVAHSRVH*HWAQELPHEVCDGG Trigger: ACCACCATCACAGACCTCGTGAGGAAGTTCTTGGGCCCAGTGCCAGTGTACCCTGCTGTGGGCAACCATGAGAGCACTCCTGTCAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | CCCTTTATGAAGGGAGGAGGGAAGCCATTGACAGGAGTGCTCTCATaGTTGCCCACAGCAGGGTACACTGGCACTGGGCCCAAGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFMKGGGKPLTGVLS*LPTAGYTGTGPKNF Trigger: GAAGTTCTTGGGCCCAGTGCCAGTGTACCCTGCTGTGGGCAACCATGAGAGCACTCCTGTCAATGGCTTCCCTCCTCCCTTCATAAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAGGAGGAGGGAAGCCATaGACAGGAGTGCTCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQTSAPGVIQILGISRTGGGKP*TGVLSW Trigger: CCATGAGAGCACTCCTGTCAATGGCTTCCCTCCTCC...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | GCGGCTTGTTTCCCTGGCCTGGCTGGCTCCTTCCCCCGAAGCTTTTGCCTCAGGGTAGTTTCCATCTATTaGGTAAACTCGGTAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AACFPGLAGSFPRSFCLRVVSIY*VNSVAR Trigger: CCTGGCTACCGAGTTTACCAAATAGATGGAAACTAC...CCTGAGGCAAAAGCTTCGGGGGAAGGAGCCAGCCAGGCCAGGGAAACAAGCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | TGGAAGTCCATAGGTTTCTCGAGCCCTGTAGAGGCGCTTCCAGCTTaGTGTGCCTCCTGCTGCGTTGGCCTGGGTCAGATTCAAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: WKSIGFSSPVEALPA*CASCCVGLGQIQDV Trigger: TACATCTTGAATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCTCGAGAAACCTATGGACTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 90 bp | GGTAGAGAAACCAGAAGGTCTGGAAGAGTTGCTCATCATCCCTCATaGGGTAGACCAGGTTGTGCCAGGAGGCAGGCATCGCATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRETRRSGRVAHHPS*GRPGCARRQASHLE Trigger: TTCCAGATGCGATGCCTGCCTCCTGGCACAACCTGGTCTACCGCATGAGGGATGATGAGCAACTCTTCCAGACCTTCTGGTTTCTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | AGAACTGAACGTGTCCACACCTCCACCACATCGTCCTCAAAGAGATaGACGGCTGACTGGCACACATCTAGTGGTGCTATGTTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RTERVHTSTTSSSKR*TADWHTSSGAMFSI Trigger: GATGCTGAACATAGCACCACTAGATGTGTGCCAGTCAGCCGTCCATCTCTTTGAGGACGATGTGGTGGAGGTGTGGACACGTTCAGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGTTCTTCAGCCCATGGTaGAGAGCAGTGAATAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SPGQTSAPGVIQILGISRFFSPW*RAVNKT Trigger: AGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAA...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | AGCCCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGGCTATGTTCAGCATCTaGCATATCTTGATGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPGQTSAPGVIQILGISRAMFSI*HILMAT Trigger: TGTGGCCATCAAGATATGCAAGATGCTGAACATAGC...CCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAGCAGGATCTGTGGAGTaGATCAAGAGCCAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGQTSAPGVIQILGISRTAGSVE*IKSQKF Trigger: GAACTTTTGGCTCTTGATCAACTCCACAGATCCTGC...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 90 bp | ACTGGCACACATCTAGTGGTGCTATGTTCAGCATCTTGCATATCTTaGTGGCCACAGAGCCTACCCGTGCCACATTGGGCTCCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGTHLVVLCSASCIS*WPQSLPVPHWAPSS Trigger: TGAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCTGAACATAGCACCACTAGATGTGTGCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 90 bp | TATGTTCAGCATCTTGCATATCTTGATGGCCACAGAGCCTACCCGTaGCACATTGGGCTCCTTCTTCAGCCCATGGTTGAGAGCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YVQHLAYLDGHRAYP*HIGLLLQPMVESSE Trigger: TTCACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCTGAACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | GTCCACACCTCCACCACATCGTCCTCAAAGAGATGGACGGCTGACTaGCACACATCTAGTGGTGCTATGTTCAGCATCTTGCATATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VHTSTTSSSKRWTAD*HTSSGAMFSILHIL Trigger: CAAGATATGCAAGATGCTGAACATAGCACCACTAGATGTGTGCCAGTCAGCCGTCCATCTCTTTGAGGACGATGTGGTGGAGGTGTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACAGCTATGGCACTGAATTaGACAGAATGGCCTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGQTSAPGVIQILGISRTAMALN*TEWPSE Trigger: TTCTGAAGGCCATTCTGTCAAATTCAGTGCCATAGC...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | TTAGGGTGTGAAGGGCATCAGCTGGTAACCAGGGTTCCCATGCCTTaGCCATGGCTTCATAGAGCCATTGTGAAGATTGGTTTCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGCEGHQLVTRVPMP*PWLHRAIVKIGFPL Trigger: TAAAGGGAAACCAATCTTCACAATGGCTCTATGAAGCCATGGCCAAGGCATGGGAACCCTGGTTACCAGCTGATGCCCTTCACACCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS-3UTR CAA 90 bp | CCAGGTCAGACATCAGCCCCAGGGGTAATCCAGATCCTGGGCATAAGTAGGACACCAATTATATGCACTTaGTCTCCTCGATTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGQTSAPGVIQILGISRTPIICT*SPRFSA Trigger: TGCTGAGAATCGAGGAGACAAAGTGCATATAATTGG...TGTCCTACTTATGCCCAGGATCTGGATTACCCCTGGGGCTGATGTCTGACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 90 bp | TATGATTTTGTAATAATTCCAGCTCCAGCTCTTAAGACAATGTCCTaGAGGGATGTGGCCAATTATATGCACTTTGTCTCCTCGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YDFVIIPAPALKTMS*RDVANYMHFVSSIL Trigger: GAGAATCGAGGAGACAAAGTGCATATAATTGGCCACATCCCTCCAGGACATTGTCTTAAGAGCTGGAGCTGGAATTATTACAAAATCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 72 bp | CCCACTCTGGGTGCCGGTAAGGACCTCTCCAGTCTCTaGTCCCAGCCGGCTCTGAGGTGGTCCTGGCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PTLGAGKDLSSL*SQPALRWSWPD Trigger: ATCCGGCCAGGACCACCTCAGAGCCGGCTGGGAGCAGAGACTGGAGAGGTCCTTACCGGCACCCAGAGTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 72 bp | AGAGCTGGGCACACAGAGTGGCCAGGCGGCAGGGTGTaGCGCAGGGCTCTGAAGGTGGGTGGCCCTTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: RAGHTEWPGGRV*RRALKVGGPYG Trigger: ACCATAAGGGCCACCCACCTTCAGAGCCCTGCGGCACACCCTGCCGCCTGGCCACTCTGTGTGCCCAGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | GTTGGGTGGCCATCCGGACCCCCGGCGGCAGCAAAGTaGATCTGCACAGTAAGGGTCTGTGCCCTCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VGWPSGPPAAAK*ICTVRVCALQV Trigger: TACCTGGAGGGCACAGACCCTTACTGTGCAGATCCACTTTGCTGCCGCCGGGGGTCCGGATGGCCACCCAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 72 bp | CAGAGTGGCCAGGCGGCAGGGTGTGCCGCAGGGCTCTaGAGGTGGGTGGCCCTTATGGTAGAGAAACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSGQAAGCAAGL*RWVALMVEKPE Trigger: TTCTGGTTTCTCTACCATAAGGGCCACCCACCTTCAGAGCCCTGCGGCACACCCTGCCGCCTGGCCACTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 72 bp | TGGCCATCCGGACCCCCGGCGGCAGCAAAGTGGATCTaGACAGTAAGGGTCTGTGCCCTCCAGGTACTCATG | + |
|
Preference number: 6 (lower is better) Translates to: WPSGPPAAAKWI*TVRVCALQVLM Trigger: CATGAGTACCTGGAGGGCACAGACCCTTACTGTGCAGATCCACTTTGCTGCCGCCGGGGGTCCGGATGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 72 bp | CTGGCACTGGGCCCAAGAACTTCCTCACGAGGTCTGTaGTGGTGGTCAGGGCCCTCAGCTGATCTTGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LALGPRTSSRGL*WWSGPSADLGE Trigger: CTCGCCAAGATCAGCTGAGGGCCCTGACCACCATCACAGACCTCGTGAGGAAGTTCTTGGGCCCAGTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | CATAGGTTTCTCGAGCCCTGTAGAGGCGCTTCCAGCTaGGTGTGCCTCCTGCTGCGTTGGCCTGGGTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HRFLEPCRGASS*VCLLLRWPGSD Trigger: ATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCTCGAGAAACCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | AACAGGGGGCGTGACCACAACCTATTAGCATCTGGGAGGCTCCCATaGGGCATCAAGTGGCGACACAAAGCAGGGCTGTCTGCTCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: NRGRDHNLLASGRLP*GIKWRHKAGLSARA Trigger: AGCCCGAGCAGACAGCCCTGCTTTGTGTCGCCACTTGATGCCCAATGGGAGCCTCCCAGATGCTAATAGGTTGTGGTCACGCCCCCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 72 bp | AGCCCTGTAGAGGCGCTTCCAGCTTGGTGTGCCTCCTaGTGCGTTGGCCTGGGTCAGATTCAAGATGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPVEALPAWCAS*CVGLGQIQDVG Trigger: ACCTACATCTTGAATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | GCTCTCATGGTTGCCCACAGCAGGGTACACTGGCACTaGGCCCAAGAACTTCCTCACGAGGTCTGTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALMVAHSRVHWH*AQELPHEVCDG Trigger: ACCATCACAGACCTCGTGAGGAAGTTCTTGGGCCCAGTGCCAGTGTACCCTGCTGTGGGCAACCATGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | AGGAGTGCTCTCATGGTTGCCCACAGCAGGGTACACTaGCACTGGGCCCAAGAACTTCCTCACGAGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSALMVAHSRVH*HWAQELPHEVC Trigger: ACAGACCTCGTGAGGAAGTTCTTGGGCCCAGTGCCAGTGTACCCTGCTGTGGGCAACCATGAGAGCACTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | ATAGGTTTCTCGAGCCCTGTAGAGGCGCTTCCAGCTTaGTGTGCCTCCTGCTGCGTTGGCCTGGGTCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: IGFSSPVEALPA*CASCCVGLGQI Trigger: AATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCTCGAGAAACCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
||
| CDS CCA 72 bp | GTAGACCAGGTTGTGCCAGGAGGCAGGCATCGCATCTaGAAGTCCATAGGTTTCTCGAGCCCTGTAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VDQVVPGGRHRI*KSIGFSSPVEA Trigger: CGCCTCTACAGGGCTCGAGAAACCTATGGACTTCCAGATGCGATGCCTGCCTCCTGGCACAACCTGGTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | GTCTGTGATGGTGGTCAGGGCCCTCAGCTGATCTTGGCGAGACTGTaGCCAGACATCATGGGCAGGGATATCTCCCGTCCAGTACACCAT | + |
|
Preference number: 6 (lower is better) Translates to: VCDGGQGPQLILARL*PDIMGRDISRPVHH Trigger: ATGGTGTACTGGACGGGAGATATCCCTGCCCATGATGTCTGGCAACAGTCTCGCCAAGATCAGCTGAGGGCCCTGACCACCATCACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | CTGGAAGTCCATAGGTTTCTCGAGCCCTGTAGAGGCGCTTCCAGCTaGGTGTGCCTCCTGCTGCGTTGGCCTGGGTCAGATTCAAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: LEVHRFLEPCRGASS*VCLLLRWPGSDSRC Trigger: ACATCTTGAATCTGACCCAGGCCAACGCAGCAGGAGGCACACCAAGCTGGAAGCGCCTCTACAGGGCTCGAGAAACCTATGGACTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 72 bp | GGCGGCAGCAAAGTGGATCTGCACAGTAAGGGTCTGTaGCCTCCAGGTACTCATGGTCCCAGTGTAGATCAG | + |
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Preference number: 6 (lower is better) Translates to: GGSKVDLHSKGL*PPGTHGPSVDQ Trigger: CTGATCTACACTGGGACCATGAGTACCTGGAGGGCACAGACCCTTACTGTGCAGATCCACTTTGCTGCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 72 bp | ACCAGAAGGTCTGGAAGAGTTGCTCATCATCCCTCATaGGGTAGACCAGGTTGTGCCAGGAGGCAGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: TRRSGRVAHHPS*GRPGCARRQAS Trigger: CGATGCCTGCCTCCTGGCACAACCTGGTCTACCGCATGAGGGATGATGAGCAACTCTTCCAGACCTTCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | CCTACCCGTGCCACATTGGGCTCCTTCTTCAGCCCATaGTTGAGAGCAGTGAATAAGACTTTGCAGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PTRATLGSFFSP*LRAVNKTLQAG Trigger: CCCCGCCTGCAAAGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | TTGGGCTCCTTCTTCAGCCCATGGTTGAGAGCAGTGAATAAGACTTaGCAGGCGGGGCAAGTGAGGTTCTGCCACCCAAAGGCACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LGSFFSPWLRAVNKT*QAGQVRFCHPKALW Trigger: CCAGAGTGCCTTTGGGTGGCAGAACCTCACTTGCCCCGCCTGCAAAGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | ACAGAGCCTACCCGTGCCACATTGGGCTCCTTCTTCAGCCCATGGTaGAGAGCAGTGAATAAGACTTTGCAGGCGGGGCAAGTGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: TEPTRATLGSFFSPW*RAVNKTLQAGQVRF Trigger: GAACCTCACTTGCCCCGCCTGCAAAGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | TTTATGAAGGGAGGAGGGAAGCCATTGACAGGAGTGCTCTCATGGTaGCCCACAGCAGGGTACACTGGCACTGGGCCCAAGAACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FMKGGGKPLTGVLSW*PTAGYTGTGPKNFL Trigger: GAGGAAGTTCTTGGGCCCAGTGCCAGTGTACCCTGCTGTGGGCAACCATGAGAGCACTCCTGTCAATGGCTTCCCTCCTCCCTTCATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | AGGTGGGTGGCCCTTATGGTAGAGAAACCAGAAGGTCTGGAAGAGTaGCTCATCATCCCTCATGCGGTAGACCAGGTTGTGCCAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RWVALMVEKPEGLEE*LIIPHAVDQVVPGG Trigger: GCCTCCTGGCACAACCTGGTCTACCGCATGAGGGATGATGAGCAACTCTTCCAGACCTTCTGGTTTCTCTACCATAAGGGCCACCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | CGTGTCCACACCTCCACCACATCGTCCTCAAAGAGATaGACGGCTGACTGGCACACATCTAGTGGTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: RVHTSTTSSSKR*TADWHTSSGAM Trigger: CATAGCACCACTAGATGTGTGCCAGTCAGCCGTCCATCTCTTTGAGGACGATGTGGTGGAGGTGTGGACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | ACCCGTGCCACATTGGGCTCCTTCTTCAGCCCATGGTaGAGAGCAGTGAATAAGACTTTGCAGGCGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: TRATLGSFFSPW*RAVNKTLQAGQ Trigger: TTGCCCCGCCTGCAAAGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | CATATCTTGATGGCCACAGAGCCTACCCGTGCCACATaGGGCTCCTTCTTCAGCCCATGGTTGAGAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: HILMATEPTRAT*GSFFSPWLRAV Trigger: CACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | CGTGACCACAACCTATTAGCATCTGGGAGGCTCCCATaGGGCATCAAGTGGCGACACAAAGCAGGGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RDHNLLASGRLP*GIKWRHKAGLS Trigger: AGACAGCCCTGCTTTGTGTCGCCACTTGATGCCCAATGGGAGCCTCCCAGATGCTAATAGGTTGTGGTCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | TGGACGGCTGACTGGCACACATCTAGTGGTGCTATGTTCAGCATCTaGCATATCTTGATGGCCACAGAGCCTACCCGTGCCACATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: WTADWHTSSGAMFSI*HILMATEPTRATLG Trigger: GCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCTGAACATAGCACCACTAGATGTGTGCCAGTCAGCCGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS GCA 72 bp | CATCTTGCATATCTTGATGGCCACAGAGCCTACCCGTaGCACATTGGGCTCCTTCTTCAGCCCATGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: HLAYLDGHRAYP*HIGLLLQPMVE Trigger: CTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | TCCTCGATTCTCAGCAGCCTGAAGCTCCTCCACCAGCCACTGGAGTaGTCCAGCAGGATCTGTGGAGTTGATCAAGAGCCAAAAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSILSSLKLLHQPLE*SSRICGVDQEPKVL Trigger: GAGAACTTTTGGCTCTTGATCAACTCCACAGATCCTGCTGGACAACTCCAGTGGCTGGTGGAGGAGCTTCAGGCTGCTGAGAATCGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | GAAGGGCATCAGCTGGTAACCAGGGTTCCCATGCCTTaGCCATGGCTTCATAGAGCCATTGTGAAGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: EGHQLVTRVPMP*PWLHRAIVKIG Trigger: ACCAATCTTCACAATGGCTCTATGAAGCCATGGCCAAGGCATGGGAACCCTGGTTACCAGCTGATGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | TTCTTCAGCCCATGGTTGAGAGCAGTGAATAAGACTTaGCAGGCGGGGCAAGTGAGGTTCTGCCACCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: FFSPWLRAVNKT*QAGQVRFCHPK Trigger: CTTTGGGTGGCAGAACCTCACTTGCCCCGCCTGCAAAGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | GACTGGCACACATCTAGTGGTGCTATGTTCAGCATCTaGCATATCTTGATGGCCACAGAGCCTACCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: DWHTSSGAMFSI*HILMATEPTRA Trigger: GGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCTGAACATAGCACCACTAGATGTGTGCCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | GACTGGCACACATCTAGTGGTGCTATGTTCAGCATCTTGCATATCTaGATGGCCACAGAGCCTACCCGTGCCACATTGGGCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DWHTSSGAMFSILHI*MATEPTRATLGSFF Trigger: GAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCTGAACATAGCACCACTAGATGTGTGCCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | AGCATCTTGCATATCTTGATGGCCACAGAGCCTACCCGTGCCACATaGGGCTCCTTCTTCAGCCCATGGTTGAGAGCAGTGAATAAGACT | + |
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Preference number: 6 (lower is better) Translates to: SILHILMATEPTRAT*GSFFSPWLRAVNKT Trigger: AGTCTTATTCACTGCTCTCAACCATGGGCTGAAGAAGGAGCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 72 bp | CATCTAGTGGTGCTATGTTCAGCATCTTGCATATCTTaGTGGCCACAGAGCCTACCCGTGCCACATTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HLVVLCSASCIS*WPQSLPVPHWA Trigger: AGCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCTGAACATAGCACCACTAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | TCCACCACATCGTCCTCAAAGAGATGGACGGCTGACTaGCACACATCTAGTGGTGCTATGTTCAGCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: STTSSSKRWTAD*HTSSGAMFSIL Trigger: CAAGATGCTGAACATAGCACCACTAGATGTGTGCCAGTCAGCCGTCCATCTCTTTGAGGACGATGTGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | CATCAGCTGGTAACCAGGGTTCCCATGCCTTGGCCATaGCTTCATAGAGCCATTGTGAAGATTGGTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HQLVTRVPMPWP*LHRAIVKIGFP Trigger: AGGGAAACCAATCTTCACAATGGCTCTATGAAGCCATGGCCAAGGCATGGGAACCCTGGTTACCAGCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | ACATCTAGTGGTGCTATGTTCAGCATCTTGCATATCTaGATGGCCACAGAGCCTACCCGTGCCACATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TSSGAMFSILHI*MATEPTRATLG Trigger: GCCCAATGTGGCACGGGTAGGCTCTGTGGCCATCAAGATATGCAAGATGCTGAACATAGCACCACTAGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | GCCCTTATGGTAGAGAAACCAGAAGGTCTGGAAGAGTaGCTCATCATCCCTCATGCGGTAGACCAGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ALMVEKPEGLEE*LIIPHAVDQVV Trigger: CACAACCTGGTCTACCGCATGAGGGATGATGAGCAACTCTTCCAGACCTTCTGGTTTCTCTACCATAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 90 bp | GTGGTCCAGGACCACATGAGAGCTTCCGGGGTAGTTTCCATCTATTaGGTAAACTCGGTAGCCAGGGTTAAGGTTGATAAAGGTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VVQDHMRASGVVSIY*VNSVARVKVDKGCS Trigger: GCTACAACCTTTATCAACCTTAACCCTGGCTACCGAGTTTACCAAATAGATGGAAACTACCCCGGAAGCTCTCATGTGGTCCTGGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS TCA 72 bp | TTCCCATGCCTTGGCCATGGCTTCATAGAGCCATTGTaGAGATTGGTTTCCCTTTATGAAGGGAGGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: FPCLGHGFIEPL*RLVSLYEGRRE Trigger: TTCCCTCCTCCCTTCATAAAGGGAAACCAATCTTCACAATGGCTCTATGAAGCCATGGCCAAGGCATGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | CAGCTCCAGCTCTTAAGACAATGTCCTGGAGGGATGTaGCCAATTATATGCACTTTGTCTCCTCGATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: QLQLLRQCPGGM*PIICTLSPRFS Trigger: TGAGAATCGAGGAGACAAAGTGCATATAATTGGCCACATCCCTCCAGGACATTGTCTTAAGAGCTGGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CAA 72 bp | GACCACATGAGAGCTTCCGGGGTAGTTTCCATCTATTaGGTAAACTCGGTAGCCAGGGTTAAGGTTGATAAA | + |
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Preference number: 6 (lower is better) Translates to: DHMRASGVVSIY*VNSVARVKVDK Trigger: TTTATCAACCTTAACCCTGGCTACCGAGTTTACCAAATAGATGGAAACTACCCCGGAAGCTCTCATGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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| CDS CCA 72 bp | GTAATAATTCCAGCTCCAGCTCTTAAGACAATGTCCTaGAGGGATGTGGCCAATTATATGCACTTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VIIPAPALKTMS*RDVANYMHFVS Trigger: GGAGACAAAGTGCATATAATTGGCCACATCCCTCCAGGACATTGTCTTAAGAGCTGGAGCTGGAATTATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046983.10 |
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