Pregenerated sensors for SMOX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027333Ensembl transcript IDs: ENSMUST00000028806.12, ENSMUST00000110179.9, ENSMUST00000110180.2, ENSMUST00000110181.8, ENSMUST00000110182.9, ENSMUST00000110183.9, ENSMUST00000110186.9, ENSMUST00000110188.8, ENSMUST00000110189.9, ENSMUST00000129143.8, ENSMUST00000131698.2, ENSMUST00000183575.8, ENSMUST00000183881.2, ENSMUST00000183947.8
Found 449 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: AGRPRAGQRAEHRGW*SSTCGVWPPRRRAP Trigger: AGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR TCA 90 bp | ACACCTTTCAGGGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TPFRAPAGRGLGTSR*AGRPRAGQRAEHRG Trigger: CCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR GCA 90 bp | CGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTaGGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: RAGQRAEHRGWWSST*GVWPPRRRAPAWAL Trigger: CAGCGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR GCA 90 bp | CGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTaGGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: RAGQRAEHRGWWSST*GVWPPRRRAPAWAL Trigger: TAAAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
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| 3UTR CCA 90 bp | CAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCGCTGTCTTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: QRAEHRGWWSSTCGV*PPRRRAPAWALSWS Trigger: GCTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR CCA 90 bp | CCTGCATGGGCGCTGTCTTGGAGCTCTCTGTGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCGCCCCACTTGAGCCCACCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PAWALSWSSLCRAGA*LASPHPPHLSPPVC Trigger: ACACACAGGTGGGCTCAAGTGGGGCGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAGCGCCCATGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| 3UTR CCA 90 bp | CAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCTTTATGGAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QRAEHRGWWSSTCGV*PPRRRAPAWALWSP Trigger: GGGGCTCCATAAAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
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| 3UTR CCA 90 bp | TCAAGGAACACATTTGGCAGTGAGGACACCTTTCAGGGCCCCTGCTaGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGC | + |
|
Preference number: 1 (lower is better) Translates to: SRNTFGSEDTFQGPC*KRSRYISMSRAASR Trigger: GCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGTCCTCACTGCCAAATGTGTTCCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR GCA 90 bp | TCTTCAAGGAACACATTTGGCAGTGAGGACACCTTTCAGGGCCCCTaGTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCG | + |
|
Preference number: 1 (lower is better) Translates to: SSRNTFGSEDTFQGP*WKRSRYISMSRAAS Trigger: CGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGTCCTCACTGCCAAATGTGTTCCTTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR TCA 90 bp | ATGCGATTCCGCACCTTCTCCCGGGTGAACACCCCGACGCTGTTCTaGCTCTCGGCATTGACTGGTTTACCATGCCGGAAGAACTCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: MRFRTFSRVNTPTLF*LSALTGLPCRKNSW Trigger: CCAGGAGTTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGTCAGAACAGCGTCGGGGTGTTCACCCGGGAGAAGGTGCGGAATCGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| 3UTR CCA 90 bp | GTTCTGGGCACTTGGATGGTAAAAGGTGACCAGGCTGCTGCTCTGTaGAGCTTCTATGCGCTGTCTTGGAGCTCTCTGTGTAGGGCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: VLGTWMVKGDQAAAL*SFYALSWSSLCRAG Trigger: CCCTGCCCTACACAGAGAGCTCCAAGACAGCGCATAGAAGCTCCACAGAGCAGCAGCCTGGTCACCTTTTACCATCCAAGTGCCCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
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| 3UTR CCA 90 bp | CTCCCGGGTGAACACCCCGACGCTGTTCTGACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAACTCCTGGGTCATGTTATAGACCTC | + |
|
Preference number: 1 (lower is better) Translates to: LPGEHPDAVLTLGID*FTMPEELLGHVIDL Trigger: GAGGTCTATAACATGACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGTCAGAACAGCGTCGGGGTGTTCACCCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| 3UTR TCA 90 bp | AAGTTTAATTTAACGAAAGGAAACAATGTATCCATCATTTATGATTaGTATTGCCAGCGTATGGCGGGTACTGGTGCTGAATGTTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: KFNLTKGNNVSIIYD*YCQRMAGTGAECSP Trigger: AGGAGAACATTCAGCACCAGTACCCGCCATACGCTGGCAATATCAATCATAAATGATGGATACATTGTTTCCTTTCGTTAAATTAAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTCGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
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Preference number: 2 (lower is better) Translates to: AGRPRAGQRAEHRGWWSSRAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...ACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGCGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
|
Preference number: 2 (lower is better) Translates to: PLLEEVSVHLDEPGGLALRAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...CAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RYISMSRAASRWPESRAPEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCGCAGAGCACCGTGGGTaGTGGAGTAGTACTTGCGGT | + |
|
Preference number: 2 (lower is better) Translates to: GPCWKRSRYISMSRAASRAEHRG*WSSTCG Trigger: ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGC...GCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR-3UTR TCA 90 bp | CGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCGCTGTCTTGGAGCTCCACATCCGCCCCACTTaGGCCCACCTGTGTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: RCVASPEKSTCMGAVLELHIRPT*AHLCVG Trigger: TCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTG...GAGCTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| 3UTR-3UTR TCA 90 bp | CTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTTTGGATGGTAAAAGGTaGCCAGGCTGCTGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LDEPGGLALAREQSTVGGLDGKR*PGCCSV Trigger: CACAGAGCAGCAGCCTGGTCACCTTTTACCATCCAA...ACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SVHLDEPGGLALAREQSTSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...GGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QGPCWKRSRYISMSRAASEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...CGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCAGAGCACCGTGGGTaGTGGAGTAGTACTTGCGGT | + |
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Preference number: 2 (lower is better) Translates to: PLLEEVSVHLDEPGGLALAEHRG*WSSTCG Trigger: ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGC...CAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGGGAAGTATGGGTTGCTaGCCCAGGCTGAGCGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RAEHRGWWSSTCGVWPPRGSMGC*PRLSAG Trigger: TCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCC...CCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAACATCGCACCTCTCCATaGCAAGAGCCTCCTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: QSTVGGGVVLAVCGLPGEHRTSP*QEPPPH Trigger: GTGGGGAGGAGGCTCTTGTCATGGAGAGGTGCGATG...TTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCCGGAGAAGAGCACCTaGATGGGCGCTGTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GGVVLAVCGLPGEEHLHGPEKST*MGAVLE Trigger: CTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGG...CCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCGGAGAAGAGCACCTaGATGGGCGCTGTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: AGQRAEHRGWWSSTCGVWPEKST*MGAVLE Trigger: CTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGG...CCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCAGTCGAAGCATCTCTGTaGAGATCTCAGCTACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SRYISMSRAASRWPESRAVEASL*RSQLQP Trigger: AGGCTGTAGCTGAGATCTGCACAGAGATGCTTCGAC...TGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: AWRKRKALGPGLTSARCPSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
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Preference number: 2 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKRAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGCATGGGCGCTGTCTTaGAGCTCTCTGTGTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPSLEKKKSSRARSDVSPAWALS*SSLCRA Trigger: TGCCCTACACAGAGAGCTCCAAGACAGCGCCCATGC...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGTTCTATGCGCTGTCTTaGAGCTCTCTGTGTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGVVLAVCGLPGEEHLHGFYALS*SSLCRA Trigger: TGCCCTACACAGAGAGCTCCAAGACAGCGCATAGAA...CCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
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| 3UTR CAA 90 bp | AAAGATACCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCAGGGTCATCCCTGATGCGATTCCGC | + |
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Preference number: 2 (lower is better) Translates to: KDTFRYCWIMASFRR*VASVSSGSSLMRFR Trigger: GCGGAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTATCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACTCTCGGCATTGACTGGTTTACCATGCCGGAAGAACTCCTGGGTCATGTTTTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTLGIDWFTMPEELLGHVFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...AACATGACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| 3UTR CAA 90 bp | ACGAGGACCAGCAGTCACGAGTTAGTGGTTCTTCAAGGAACACATTaGGCAGTGAGGACACCTTTCAGGGCCCCTGCTGGAAGAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TRTSSHELVVLQGTH*AVRTPFRAPAGRGL Trigger: GAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGTCCTCACTGCCAAATGTGTTCCTTGAAGAACCACTAACTCGTGACTGCTGGTCCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGGTCATTACCCAGCCTaGAGAAAAAGAAAAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: AWRKRKALGPGLTSARCPGHYPA*RKRKAL Trigger: GAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCCCTGATGCGATTCCGCACCTTCTCCCGGGTGAACACCCCGACGCTGTTCCTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
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Preference number: 2 (lower is better) Translates to: SSLMRFRTFSRVNTPTLFLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...GAACAGCGTCGGGGTGTTCACCCGGGAGAAGGTGCGGAATCGCATCAGGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAAAGATACCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTTGGTTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TAKIPSGTAGSWRASGAWLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTATCTTTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGGGTCATTACCCAGCCTaGAGAAAAAGAAAAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PPGHYPAWRKRKALGPGLGHYPA*RKRKAL Trigger: GAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| 3UTR CAA 90 bp | TTACAACTCTGGCACCTGGTAACTGCTTCCCTCCTACTTGATATCTaGTGGCTGCTTTTGCCCCTCCTACTGCAGTTGATGGAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LQLWHLVTASLLLDI*WLLLPLLLQLMEKA Trigger: TGCTTTCTCCATCAACTGCAGTAGGAGGGGCAAAAGCAGCCACAAGATATCAAGTAGGAGGGAAGCAGTTACCAGGTGCCAGAGTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGAGTATTGAAGGCACTTaGAATAACATGAGAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PPGHYPAWRKRKALGPGLSIEGT*NNMREE Trigger: TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACT...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAAGTATTGAAGGCACTTaGAATAACATGAGAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KKKSSRARSDVSPVSTTESIEGT*NNMREE Trigger: TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACT...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTTAGAGAGAAGGCAGCTGGTGGTGACCAAAGGTGACCCACTGTATACTGTTAGTATTGAAGGCACTTaGAATAACATGAGAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GLERRQLVVTKGDPLYTVSIEGT*NNMREE Trigger: TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACT...AACAGTATACAGTGGGTCACCTTTGGTCACCACCAGCTGCCTTCTCTCTAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTAGGTTCTCTTATAGTAGACCCTGTGGCCAGCAGTAAGTTCATCAAGCCCGGTCATTACCCAGCCTaGAGAAAAAGAAAAGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: CLGSLIVDPVASSKFIKPGHYPA*RKRKAL Trigger: GAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC...GGGCTTGATGAACTTACTGCTGGCCACAGGGTCTACTATAAGAGAACCTAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAGGTCATTACCCAGCCTaGAGAAAAAGAAAAGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YYPKMQSIEGTCNNMREEGHYPA*RKRKAL Trigger: GAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| 3UTR CCA 72 bp | CGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTaGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: RPRAGQRAEHRG*WSSTCGVWPPR Trigger: CCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
||
| 3UTR TCA 72 bp | AGGGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RAPAGRGLGTSR*AGRPRAGQRAE Trigger: CTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
||
| 3UTR CCA 72 bp | CCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PRAGQRAEHRGW*SSTCGVWPPRR Trigger: TCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
||
| 3UTR CCA 72 bp | GAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EHRGWWSSTCGV*PPRRRAPAWAL Trigger: CAGCGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| 3UTR GCA 72 bp | CAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTaGGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QRAEHRGWWSST*GVWPPRRRAPA Trigger: TGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
||
| 3UTR CCA 72 bp | GCGCTGTCTTGGAGCTCTCTGTGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCGCCCCACTTGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ALSWSSLCRAGA*LASPHPPHLSP Trigger: TGGGCTCAAGTGGGGCGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
||
| 3UTR CCA 72 bp | GAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: EHRGWWSSTCGV*PPRRRAPAWAL Trigger: TAAAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGCTTCAAGGAACACATTaGGCAGTGAGGACACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: YISMSRAASRWPESRAPWLQGTH*AVRTPF Trigger: GAAAGGTGTCCTCACTGCCAAATGTGTTCCTTGAAG...CCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| 3UTR TCA 72 bp | CGCACCTTCTCCCGGGTGAACACCCCGACGCTGTTCTaGCTCTCGGCATTGACTGGTTTACCATGCCGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTFSRVNTPTLF*LSALTGLPCRK Trigger: CTTCCGGCATGGTAAACCAGTCAATGCCGAGAGTCAGAACAGCGTCGGGGTGTTCACCCGGGAGAAGGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
||
| 3UTR CCA 72 bp | ACATTTGGCAGTGAGGACACCTTTCAGGGCCCCTGCTaGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: TFGSEDTFQGPC*KRSRYISMSRA Trigger: CGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGTCCTCACTGCCAAATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCAAAGATACCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTTGTCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: HSKDTFRYCWIMASFRRLSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...CAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTATCTTTGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
||
| 3UTR GCA 72 bp | AACACATTTGGCAGTGAGGACACCTTTCAGGGCCCCTaGTGGAAGAGGTCTCGGTACATCTCGATGAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: NTFGSEDTFQGP*WKRSRYISMSR Trigger: CCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGTCCTCACTGCCAAATGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| 3UTR CCA 72 bp | TCACAGAAAGTAGAGGCGGCTTCCCACCAAGGAACCTaGGTTAGAGAGAAGGCAGCTGGTGGTGACCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQKVEAASHQGT*VREKAAGGDQR Trigger: CCTTTGGTCACCACCAGCTGCCTTCTCTCTAACCCAGGTTCCTTGGTGGGAAGCCGCCTCTACTTTCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR CCA 72 bp | GAACACCCCGACGCTGTTCTGACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAACTCCTGGGTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: EHPDAVLTLGID*FTMPEELLGHV Trigger: AACATGACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGTCAGAACAGCGTCGGGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
||
| 3UTR CCA 72 bp | ACTTGGATGGTAAAAGGTGACCAGGCTGCTGCTCTGTaGAGCTTCTATGCGCTGTCTTGGAGCTCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TWMVKGDQAAAL*SFYALSWSSLC Trigger: ACACAGAGAGCTCCAAGACAGCGCATAGAAGCTCCACAGAGCAGCAGCCTGGTCACCTTTTACCATCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
||
| 3UTR TCA 72 bp | ACAACTCTGGCACCTGGTAACTGCTTCCCTCCTACTTaGTATCTTGTGGCTGCTTTTGCCCCTCCTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TTLAPGNCFPPT*YLVAAFAPPTA Trigger: TGCAGTAGGAGGGGCAAAAGCAGCCACAAGATATCAAGTAGGAGGGAAGCAGTTACCAGGTGCCAGAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR TCA 72 bp | CCTGGGTCATGTTATAGACCTCGTTGTATAAATCGCTaGATTCCTCAACCACGTCCTTGGGGATGCGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGSCYRPRCINR*IPQPRPWGCGS Trigger: GCTGCCGCATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAGGTCTATAACATGACCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
||
| 3UTR TCA 72 bp | ATATCTTGTGGCTGCTTTTGCCCCTCCTACTGCAGTTaGTGGAGAAAGCAGGGACACTGGAAGTCAGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: ISCGCFCPSYCS*WRKQGHWKSEP Trigger: AGGTTCTGACTTCCAGTGTCCCTGCTTTCTCCATCAACTGCAGTAGGAGGGGCAAAAGCAGCCACAAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR CCA 72 bp | ATGTATCCATCATTTATGATTGATATTGCCAGCGTATaGCGGGTACTGGTGCTGAATGTTCTCCTCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: MYPSFMIDIASV*RVLVLNVLLCP Trigger: GGGGCAGAGGAGAACATTCAGCACCAGTACCCGCCATACGCTGGCAATATCAATCATAAATGATGGATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR TCA 72 bp | TGGGTTAGAGAGAAGGCAGCTGGTGGTGACCAAAGGTaGCCCACTGTATACTGTTTAGGTTCTCTTATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WVREKAAGGDQR*PTVYCLGSLIV Trigger: TACTATAAGAGAACCTAAACAGTATACAGTGGGTCACCTTTGGTCACCACCAGCTGCCTTCTCTCTAACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR CCA 72 bp | AGTAAGTTCATCAAGCCCTGGTATGGAGCCACAATTTaGGGGTATCCTTCCATAGAATTCACCTTCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKFIKPWYGATI*GYPSIEFTFIP Trigger: TGGAATGAAGGTGAATTCTATGGAAGGATACCCCCAAATTGTGGCTCCATACCAGGGCTTGATGAACTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR TCA 72 bp | TTAACGAAAGGAAACAATGTATCCATCATTTATGATTaGTATTGCCAGCGTATGGCGGGTACTGGTGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTKGNNVSIIYD*YCQRMAGTGAE Trigger: TTCAGCACCAGTACCCGCCATACGCTGGCAATATCAATCATAAATGATGGATACATTGTTTCCTTTCGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTCCCGGAAGTATGGGTTaGTGCCCCAGGCTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGRPRAGQRAEHRGWWSSPGSMG*CPRLSA Trigger: TGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGG...ACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR TCA 90 bp | TACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTTGCTGCCCCAGGCTaGGCGCAGGATTCGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YISMSRAASRWPESRAPWVAAPG*AQDSPR Trigger: CCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAAC...CCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISMSRAASRWPESRAPWVASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...CACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | CCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLALAREQSTVGGGVVRQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...TACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCGCTGTCTTGGAGCTCCCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: RCVASPEKSTCMGAVLELPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...GAGCTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISMSRAASRWPESRAPWVGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...CACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| CDS-3UTR CCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGCGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARRAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCRAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCAAGCCTCACACTCTaGACACGGCCCCCAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRYISMSRAASRWPESRAPSLTL*TRPPMW Trigger: CCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGG...TGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCAGGAAGTATGGGTTGCTaGCCCAGGCTGAGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRYISMSRAASRWPESRAGSMGC*PRLSAG Trigger: TCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCC...TGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR CCA 90 bp | CGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCGCTGTCTTGGAGCTCTTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCVASPEKSTCMGAVLELFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...GAGCTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPRAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | CCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTTCCGTAGGCCACGACTaGGAGGGTCATCCGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRAGQRAEHRGWWSSTCGSVGHD*EGHPHC Trigger: ACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGA...ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGCTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARLGTSR*AGRPRA Trigger: AGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAG...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGACCCGGAAGTATGGGTTaGTGCCCCAGGCTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHRGWWSSTCGVWPPRRRPGSMG*CPRLSA Trigger: TGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGG...TCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGATCCATGGATCCAGGTaGCTCCCAGCTCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGPCWKRSRYISMSRAASIHGSR*LPAQRW Trigger: CCACCTTTGAGCTGGGAGCCACCTGGATCCATGGAT...CGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSARAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACCCGAGGGGATGATGTaGTGGGCGCCTGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPPEGMM*WAPGIS Trigger: GGAGATCCCAGGCGCCCATCACATCATCCCCTCGGG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGGTTGCTGCCCCAGGCTaGGCGCAGGATTCGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARVAAPG*AQDSPR Trigger: CCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAAC...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR TCA 90 bp | CACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACACATCCGCCCCACTTaGGCCCACCTGTGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRGWWSSTCGVWPPRRRAHIRPT*AHLCVG Trigger: TCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTG...TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTCTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTLGTSR*AGRPRA Trigger: AGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAG...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGGGAAGTATGGGTTGCTaGCCCAGGCTGAGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRAEHRGWWSSTCGVWGSMGC*PRLSAG Trigger: TCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCC...CCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCGTTCCCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVHLDEPGGLALAREQSVPFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGGGAAC...GCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR CCA 90 bp | GAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGATTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EHRGWWSSTCGVWPPRRRFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...TCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCGGGCGGCCTCGCGCTaGCCAGAGAGCAGAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSRAASR*PESRAP Trigger: CGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCG...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCTCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGPCWKRSRYISMSRAASLFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGAG...CGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGCTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQLGTSR*AGRPRA Trigger: AGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAG...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACCTGGTCCCAGTGGATaGAACGGACCGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPPGPSG*NGPASP Trigger: TGGGGAAGCCGGTCCGTTGCATCCACTGGGACCAGG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACCCGGAAGTATGGGTTaGTGCCCCAGGCTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPPGSMG*CPRLSA Trigger: TGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GACACCTTTCAGGGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DTFQGPCWKRSRYISMSRASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...CCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGAGGCCTGGTCCCAGTaGATGCAACGGACCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPEAWSQ*MQRTGF Trigger: GAAGCCGGTCCGTTGCATCCACTGGGACCAGGCCTC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCTGCCCAGGCGGTGGATaGCGGCCACCTTCTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSACPGGG*RPPSPW Trigger: CCACGGAGAAGGTGGCCGCCATCCACCGCCTGGGCA...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCCAATGCCCAGGCGGTaGATGGCGGCCACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPPMPRR*MAATFS Trigger: GGAGAAGGTGGCCGCCATCCACCGCCTGGGCATTGG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGCCCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAEHRGWWSSTCGVWPPRPFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGG...CCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR CCA 90 bp | CTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGATTCGCCTAGGTTTTaGTATATTGGGGTTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDEPGGLALAREQSTVGGDSPRF*YIGVPF Trigger: GAAGGGAACCCCAATATACCAAAACCTAGGCGAATC...ACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR TCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGCCCGAGGGGATGATGTaGTGGGCGCCTGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLPEGMM*WAPGIS Trigger: GGAGATCCCAGGCGCCCATCACATCATCCCCTCGGG...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGCCCGAGGGGATGATGTaGTGGGCGCCTGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQPEGMM*WAPGIS Trigger: GGAGATCCCAGGCGCCCATCACATCATCCCCTCGGG...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTTGGTGTACTGCCTCTTaGGCACGCCCAGCGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCWCTAS*ARPAKR Trigger: CCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCA...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCGTTGCTGCCCCAGGCTaGGCGCAGGATTCGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSAVAAPG*AQDSPR Trigger: CCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAAC...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR TCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGCACATCCGCCCCACTTaGGCCCACCTGTGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARHIRPT*AHLCVG Trigger: TCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTG...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR TCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACACATCCGCCCCACTTaGGCCCACCTGTGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPHIRPT*AHLCVG Trigger: TCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR TCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCCTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVLGTSR*AGRPRA Trigger: AGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAG...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCAGTGGTACCAATaGCCAGGCGGTGGATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARCQWYQ*PGGGWR Trigger: CCGCCATCCACCGCCTGGGCATTGGTACCACTGACA...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTTCCTCCCACACGAACTaGAGGCTGTTGCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCSSHTN*RLLHSG Trigger: CCCCGAGTGCAACAGCCTGCAGTTCGTGTGGGAGGA...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGGAAGTATGGGTTGCTaGCCCAGGCTGAGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPGSMGC*PRLSAG Trigger: TCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR GCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGCCGGAGAAGAGCACCTaGATGGGCGCTGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARPEKST*MGAVLE Trigger: CTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGG...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110188.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGGCGCTCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGGGVVLAVCGLPGEEHLALFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGAGCGC...CAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTTTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTCCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGACCCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHRGWWSSTCGVWPPRRRPFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGG...TCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPRQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCRQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAGTTGCTGCCCCAGGCTaGGCGCAGGATTCGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEVAAPG*AQDSPR Trigger: CCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAAC...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR TCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCACATCCGCCCCACTTaGGCCCACCTGTGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPHIRPT*AHLCVG Trigger: TCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCTCTGTGGAGCTTCTATGCGCTGTCTTGGAGCTCTCTGTGTAGGGCAGCACATCCGCCCCACTTaGGCCCACCTGTGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLCGASMRCLGALCVGQHIRPT*AHLCVG Trigger: TCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTG...CTGCCCTACACAGAGAGCTCCAAGACAGCGCATAGAAGCTCCACAGAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
||
| CDS-3UTR GCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCCAAGCCTCACACTCTaGACACGGCCCCCAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPPSLTL*TRPPMW Trigger: CCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACACCTGGTCCCAGTGGATaGAACGGACCGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTPGPSG*NGPASP Trigger: TGGGGAAGCCGGTCCGTTGCATCCACTGGGACCAGG...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGTCCTCCCACACGAACTaGAGGCTGTTGCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPSSHTN*RLLHSG Trigger: CCCCGAGTGCAACAGCCTGCAGTTCGTGTGGGAGGA...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCCCGGAAGTATGGGTTaGTGCCCCAGGCTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSAPGSMG*CPRLSA Trigger: TGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGG...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR GCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCCGGAGAAGAGCACCTaGATGGGCGCTGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPPEKST*MGAVLE Trigger: CTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110188.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACACCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGCCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTGGAGCTCTCTGTGTAGGGCAGGGGCTTGGCTAGCTTCTCCACATCCGGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSLCRAGAWLASPHPGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...CGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| CDS-3UTR CCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGGAGGCCTGGTCCCAGTaGATGCAACGGACCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQEAWSQ*MQRTGF Trigger: GAAGCCGGTCCGTTGCATCCACTGGGACCAGGCCTC...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAACGGTCACAATCACGTaGTCCGCTGGGATCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPTVTIT*SAGITS Trigger: CGAGGTGATCCCAGCGGACCACGTGATTGTGACCGT...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGACGGTCACAATCACGTaGTCCGCTGGGATCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARTVTIT*SAGITS Trigger: CGAGGTGATCCCAGCGGACCACGTGATTGTGACCGT...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCAATGCCCAGGCGGTaGATGGCGGCCACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSPMPRR*MAATFS Trigger: GGAGAAGGTGGCCGCCATCCACCGCCTGGGCATTGG...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARCRAGA*LASPHP Trigger: CGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACA...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTTGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCCRAGA*LASPHP Trigger: CGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACA...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGCATGGGCGCTGTCTTaGAGCTCTCTGTGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPAWALS*SSLCRA Trigger: TGCCCTACACAGAGAGCTCCAAGACAGCGCCCATGC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110188.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGCAGAGCACCGTGGGTaGTGGAGTAGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPAEHRG*WSSTCG Trigger: ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGGCAGAGCACCGTGGGTaGTGGAGTAGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARAEHRG*WSSTCG Trigger: ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGC...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR TCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGTCCGTAGGCCACGACTaGGAGGGTCATCCGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQSVGHD*EGHPHC Trigger: ACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGA...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR TCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCTGGTGTACTGCCTCTTaGGCACGCCCAGCGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSAWCTAS*ARPAKR Trigger: CCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCA...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR TCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACATGGTGTACTGCCTCTTaGGCACGCCCAGCGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTWCTAS*ARPAKR Trigger: CCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCA...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR TCA 90 bp | TGGGGGTATCCTTCCATAGAATTCACCTTCATTCCACGCAGCCTGCCTACCATTCTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGYPSIEFTFIPRSLPTILGTSR*AGRPRA Trigger: AGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAG...AATGGTAGGCAGGCTGCGTGGAATGAAGGTGAATTCTATGGAAGGATACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
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| CDS-3UTR GCA 90 bp | CGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCTTTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGWWSSTCGVWPPRRRAPLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...AGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| CDS-3UTR GCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGCTATGCTGTGGGAGCTaGTCTCACAGCTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARLCCGS*SHSSPP Trigger: AGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAG...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCACCTGGTCCCAGTGGATaGAACGGACCGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSPGPSG*NGPASP Trigger: TGGGGAAGCCGGTCCGTTGCATCCACTGGGACCAGG...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACCTGGTCCCAGTGGATaGAACGGACCGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEPGPSG*NGPASP Trigger: TGGGGAAGCCGGTCCGTTGCATCCACTGGGACCAGG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGTGTCAGTGGTACCAATaGCCAGGCGGTGGATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQCQWYQ*PGGGWR Trigger: CCGCCATCCACCGCCTGGGCATTGGTACCACTGACA...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCTCCTCCCACACGAACTaGAGGCTGTTGCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSASSHTN*RLLHSG Trigger: CCCCGAGTGCAACAGCCTGCAGTTCGTGTGGGAGGA...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGGAGGGTACAGCTCTCTaGCTCATCCTCCCACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSAREGTAL*LILPHE Trigger: TTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTC...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACCTTTCAGGGCCCCTaGTGGAAGAGGTCTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTTFQGP*WKRSRY Trigger: GTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGT...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TCCCCGGAGAAGAGCACCTGCATGGGCTTTATGGAGCCCCTACTAGGGTCCAGGGTTCCCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPEKSTCMGFMEPLLGSRVPFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGGGAAC...CCTGGACCCTAGTAGGGGCTCCATAAAGCCCATGCAGGTGCTCTTCTCCGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183881.2 |
||
| CDS-3UTR CCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGATCCATGGATCCAGGTaGCTCCCAGCTCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARIHGSR*LPAQRW Trigger: CCACCTTTGAGCTGGGAGCCACCTGGATCCATGGAT...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGTTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCTTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSAFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGTACCAGAGCTCAGGTaGGTAGGTGAGGGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPVPELR*VGEGTA Trigger: AGCTGTACCCTCACCTACCCACCTGAGCTCTGGTAC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTGTACCAGAGCTCAGGTaGGTAGGTGAGGGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCVPELR*VGEGTA Trigger: AGCTGTACCCTCACCTACCCACCTGAGCTCTGGTAC...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCATTTCAGGGCCCCTGCTaGAAGAGGTCTCGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPFQGPC*KRSRYI Trigger: GATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAA...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCGATTCGCCTAGGTTTTaGTATATTGGGGTTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRSRYISMSRAASRWPESDSPRF*YIGVPF Trigger: GAAGGGAACCCCAATATACCAAAACCTAGGCGAATC...GCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| 3UTR CAA 72 bp | TTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCAGGGTCATCCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FRYCWIMASFRR*VASVSSGSSLM Trigger: CATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGCGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQRQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR TCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSARQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGCGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLRQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR TCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCCATCGCACCTCTCCATaGCAAGAGCCTCCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVHRTSP*QEPPPH Trigger: GTGGGGAGGAGGCTCTTGTCATGGAGAGGTGCGATG...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR TCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACATCGCACCTCTCCATaGCAAGAGCCTCCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEHRTSP*QEPPPH Trigger: GTGGGGAGGAGGCTCTTGTCATGGAGAGGTGCGATG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACACATCCGCCCCACTTaGGCCCACCTGTGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEHIRPT*AHLCVG Trigger: TCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR TCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKLGTSR*AGRPRA Trigger: AGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCAAGCCTCACACTCTaGACACGGCCCCCAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSPSLTL*TRPPMW Trigger: CCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGG...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACCAAGCCTCACACTCTaGACACGGCCCCCAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEPSLTL*TRPPMW Trigger: CCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGTGTAGGGCAGGGGCTTGGCTAGCTTCTCCACATCCGCCCCACTTGAGCTTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCRAGAWLASPHPPHLSLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...GCTCAAGTGGGGCGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCATCCACCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPSTFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGA...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCTATGCTGTGGGAGCTaGTCTCACAGCTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPLCCGS*SHSSPP Trigger: AGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTGGGACACCTCATCTATaGTGTGGGAGCTGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTGTPHL*CGSCSH Trigger: GTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCC...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCGGAAGTATGGGTTGCTaGCCCAGGCTGAGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSGSMGC*PRLSAG Trigger: TCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCC...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR GCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAGGAAGTATGGGTTGCTaGCCCAGGCTGAGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEGSMGC*PRLSAG Trigger: TCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCC...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR GCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCACCGGAGAAGAGCACCTaGATGGGCGCTGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSPEKST*MGAVLE Trigger: CTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGG...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110188.8 |
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| CDS-3UTR GCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACCTTTCAGGGCCCCTaGTGGAAGAGGTCTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLTFQGP*WKRSRY Trigger: GTACCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGT...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGATCCATGGATCCAGGTaGCTCCCAGCTCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPIHGSR*LPAQRW Trigger: CCACCTTTGAGCTGGGAGCCACCTGGATCCATGGAT...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTATCCATGGATCCAGGTaGCTCCCAGCTCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTIHGSR*LPAQRW Trigger: CCACCTTTGAGCTGGGAGCCACCTGGATCCATGGAT...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: REQSTVGGGVVLAVCGLPTLGID*FTMPEE Trigger: TTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGT...GGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AAGTATGGGTTGCTGCCCCAGGCTGAGCGCAGGATTCGCCTAGGTTTTGGTATAGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KYGLLPQAERRIRLGFGIASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...TATACCAAAACCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAACCCATACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSAGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTACCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCTFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGT...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTACCTCATCTATGCTGTaGGAGCTGCTCTCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAWRKRKALGPGLTSARCTSSML*ELLSQL Trigger: GAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGT...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAACGGTCACAATCACGTaGTCCGCTGGGATCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTTVTIT*SAGITS Trigger: CGAGGTGATCCCAGCGGACCACGTGATTGTGACCGT...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTCCGTGGGCAGGCATaGCCTAAAGAAACTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPLRGQA*PKETGV Trigger: TACACCAGTTTCTTTAGGCCATGCCTGCCCACGGAG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATGCCCAGGCGGTGGATaGCGGCCACCTTCTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKCPGGG*RPPSPW Trigger: CCACGGAGAAGGTGGCCGCCATCCACCGCCTGGGCA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACATGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTCRAGA*LASPHP Trigger: CGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACA...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGGCAGAGCACCGTGGGTaGTGGAGTAGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQAEHRG*WSSTCG Trigger: ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGC...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTGCCCCTCCTACTGCAGTTGATGGAGAAAGCAGGGACACTGGAAGTCAGATCCGTAGGCCACGACTaGGAGGGTCATCCGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLLLQLMEKAGTLEVRSVGHD*EGHPHC Trigger: ACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGA...TCTGACTTCCAGTGTCCCTGCTTTCTCCATCAACTGCAGTAGGAGGGGCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGGGVVLAVCGLPGEEHLRCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...CAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTERQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCCGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVRQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACCCGAGGGGATGATGTaGTGGGCGCCTGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKPEGMM*WAPGIS Trigger: GGAGATCCCAGGCGCCCATCACATCATCCCCTCGGG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACACTATGCTGTGGGAGCTaGTCTCACAGCTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTLCCGS*SHSSPP Trigger: AGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAG...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAGGGTACAGCTCTCTaGCTCATCCTCCCACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTEGTAL*LILPHE Trigger: TTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTC...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACACGAAGCCACAGATCTTaGGGTACCAGAGCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTRSHRS*GTRAQV Trigger: CACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCG...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGGGCTCCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQGSFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGGAGCC...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTATGGGCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTMGFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGCCCAT...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110183.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTAGAGAGAAGGCAGCTGGTGGTGACCAAAGGTGACCCACTGTATACTGTTTTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLERRQLVVTKGDPLYTVFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...AACAGTATACAGTGGGTCACCTTTGGTCACCACCAGCTGCCTTCTCTCTAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
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| CDS-3UTR CCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACCAATGCCCAGGCGGTaGATGGCGGCCACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKPMPRR*MAATFS Trigger: GGAGAAGGTGGCCGCCATCCACCGCCTGGGCATTGG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGGTACCAGAGCTCAGGTaGGTAGGTGAGGGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQVPELR*VGEGTA Trigger: AGCTGTACCCTCACCTACCCACCTGAGCTCTGGTAC...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGGTACCAGAGCTCAGGTaGGTAGGTGAGGGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLVPELR*VGEGTA Trigger: AGCTGTACCCTCACCTACCCACCTGAGCTCTGGTAC...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCTGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSCRAGA*LASPHP Trigger: CGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACA...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAGCATGGGCGCTGTCTTaGAGCTCTCTGTGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEAWALS*SSLCRA Trigger: TGCCCTACACAGAGAGCTCCAAGACAGCGCCCATGC...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110188.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCGAGCACCGTGGGTGGTaGAGTAGTACTTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSEHRGW*SSTCGV Trigger: CACACCGCAAGTACTACTCCACCACCCACGGTGCTC...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TCCATAGAATTCACCTTCATTCCACGCAGCCTGCCTACCATTCAACCAAGCTCCCCAAGCCTCACACTCTaGACACGGCCCCCAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIEFTFIPRSLPTIQPSSPSLTL*TRPPMW Trigger: CCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGG...GGAGCTTGGTTGAATGGTAGGCAGGCTGCGTGGAATGAAGGTGAATTCTATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGTCCACCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQSTFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGA...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACATCCACCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTSTFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGA...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCGGGACACCTCATCTATaGTGTGGGAGCTGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVGTPHL*CGSCSH Trigger: GTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCC...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGGGACACCTCATCTATaGTGTGGGAGCTGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSGTPHL*CGSCSH Trigger: GTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCC...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCAAGAAACTGGTGTACTaGCTCTTGAGCACGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSAKKLVY*LLSTPS Trigger: GCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTT...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCGAGGGTACAGCTCTCTaGCTCATCCTCCCACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSEGTAL*LILPHE Trigger: TTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTC...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCGAGGGTACAGCTCTCTaGCTCATCCTCCCACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVEGTAL*LILPHE Trigger: TTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTC...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGAGGGTACAGCTCTCTaGCTCATCCTCCCACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSEGTAL*LILPHE Trigger: TTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTC...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACGAAGCCACAGATCTTaGGGTACCAGAGCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTERSHRS*GTRAQV Trigger: CACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTCGAAGCATCTCTGTaGAGATCTCAGCTACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPVEASL*RSQLQP Trigger: AGGCTGTAGCTGAGATCTGCACAGAGATGCTTCGAC...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPTLGID*FTMPEE Trigger: TTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGT...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TCCATAGAATTCACCTTCATTCCACGCAGCCTGCCTACCATTCAACCAAGCTCCGCTTCAGGCGCTTGGTaGCCTCTGTGTCGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIEFTFIPRSLPTIQPSSASGAW*PLCRQG Trigger: ACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGC...GGAGCTTGGTTGAATGGTAGGCAGGCTGCGTGGAATGAAGGTGAATTCTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAACCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTTFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGT...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGAGGCCTGGTCCCAGTaGATGCAACGGACCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKEAWSQ*MQRTGF Trigger: GAAGCCGGTCCGTTGCATCCACTGGGACCAGGCCTC...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGCTCCGTGGGCAGGCATaGCCTAAAGAAACTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQLRGQA*PKETGV Trigger: TACACCAGTTTCTTTAGGCCATGCCTGCCCACGGAG...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAGGCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTEGFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGCC...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110183.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATCCGTAGGCCACGACTaGGAGGGTCATCCGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKSVGHD*EGHPHC Trigger: ACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGCGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YPAWRKRKALGPGLTSARRCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTGGAGCTCTCTGTGTAGGGCAGGGGCTTGGCTAGCTTCTCCACATCCGCGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSWSSLCRAGAWLASPHPRCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...CGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACATTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGTTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAAAGAAACTGGTGTACTaGCTCTTGAGCACGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSKKLVY*LLSTPS Trigger: GCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTT...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATGTCAGTGGTACCAATaGCCAGGCGGTGGATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKCQWYQ*PGGGWR Trigger: CCGCCATCCACCGCCTGGGCATTGGTACCACTGACA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATCCTCCCACACGAACTaGAGGCTGTTGCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKSSHTN*RLLHSG Trigger: CCCCGAGTGCAACAGCCTGCAGTTCGTGTGGGAGGA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGGTCGAAGCATCTCTGTaGAGATCTCAGCTACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQVEASL*RSQLQP Trigger: AGGCTGTAGCTGAGATCTGCACAGAGATGCTTCGAC...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCGTCGAAGCATCTCTGTaGAGATCTCAGCTACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSAVEASL*RSQLQP Trigger: AGGCTGTAGCTGAGATCTGCACAGAGATGCTTCGAC...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TCTTTACAACTCTGGCACCTGGTAACTGCTTCCCTCCTACTTGATATCTTGTGGCCCGGAAGTATGGGTTaGTGCCCCAGGCTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQLWHLVTASLLLDILWPGSMG*CPRLSA Trigger: TGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGG...CCACAAGATATCAAGTAGGAGGGAAGCAGTTACCAGGTGCCAGAGTTGTAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACCGGAGAAGAGCACCTaGATGGGCGCTGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKPEKST*MGAVLE Trigger: CTCCAAGACAGCGCCCATGCAGGTGCTCTTCTCCGG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110188.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTTLGID*FTMPEE Trigger: TTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGT...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAACCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSTFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGT...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCACCTCATCTATGCTGTaGGAGCTGCTCTCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSLPSLEKKKSSRARSDVTSSML*ELLSQL Trigger: GAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGT...GACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAACCTCATCTATGCTGTaGGAGCTGCTCTCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSTSSML*ELLSQL Trigger: GAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGT...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACTCCGTGGGCAGGCATaGCCTAAAGAAACTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTELRGQA*PKETGV Trigger: TACACCAGTTTCTTTAGGCCATGCCTGCCCACGGAG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGATTCGCCTAGGTTTTaGTATATTGGGGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRKRKALGPGLTSARCPDSPRF*YIGVPC Trigger: ACAGGGAACCCCAATATACCAAAACCTAGGCGAATC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| 3UTR CAA 72 bp | AGCAGTCACGAGTTAGTGGTTCTTCAAGGAACACATTaGGCAGTGAGGACACCTTTCAGGGCCCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHELVVLQGTH*AVRTPFRAPAG Trigger: TCCAGCAGGGGCCCTGAAAGGTGTCCTCACTGCCAAATGTGTTCCTTGAAGAACCACTAACTCGTGACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
||
| 3UTR CAA 72 bp | CAGGCTGAGCGCAGGATTCGCCTAGGTTTTGGTATATaGGGGTTCCCTGTGAACTGTCGAAGCATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAERRIRLGFGI*GFPVNCRSISV Trigger: CACAGAGATGCTTCGACAGTTCACAGGGAACCCCAATATACCAAAACCTAGGCGAATCCTGCGCTCAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACGTCAGGGTCATCCCTaGTGCGATTCCGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKRQGHP*CDSAPS Trigger: AGAAGGTGCGGAATCGCATCAGGGATGACCCTGACG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCATTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHYPAWRKRKALGPGLTSLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAATTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTELTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCACCTGTGTGTAGGAATAGGAACCCCGGAAGTATGGGTTGCTGCCCCAGGCTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPPVCRNRNPGSMGCCPRLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...CCTGGGGCAGCAACCCATACTTCCGGGGTTCCTATTCCTACACACAGGTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTTLGID*FTMPEE Trigger: TTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGT...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HYPAWRKRKALGPGLTSATLGID*FTMPEE Trigger: TTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGT...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCATGGGCGCTGTCTTaGAGCTCTCTGTGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKAWALS*SSLCRA Trigger: TGCCCTACACAGAGAGCTCCAAGACAGCGCCCATGC...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110188.8 |
||
| CDS-3UTR TCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGCGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLRCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGGGACACCTCATCTATaGTGTGGGAGCTGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKGTPHL*CGSCSH Trigger: GTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCC...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACGAAGCCACAGATCTTaGGGTACCAGAGCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKRSHRS*GTRAQV Trigger: CACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCCCCTCCTACTGCAGTTGATGGAGAAAGCAGGGACACTGGAAGTCAGAGTCGAAGCATCTCTGTaGAGATCTCAGCTACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLLLQLMEKAGTLEVRVEASL*RSQLQP Trigger: AGGCTGTAGCTGAGATCTGCACAGAGATGCTTCGAC...TCTGACTTCCAGTGTCCCTGCTTTCTCCATCAACTGCAGTAGGAGGGGCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAATCCATGGATCCAGGTaGCTCCCAGCTCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKIHGSR*LPAQRW Trigger: CCACCTTTGAGCTGGGAGCCACCTGGATCCATGGAT...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGGAGAAGTCTTCCAGGGGAATCTCACTCAGCAGGCACAAACAGAGGGCTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAGRSLPGESHSAGTNRGLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...CCCTCTGTTTGTGCCTGCTGAGTGAGATTCCCCTGGAAGACTTCTCCCTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTCTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEKKKSSRARSDVSPVSTLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGCTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEKKKSSRARSDVSPLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTETLGID*FTMPEE Trigger: TTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGT...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAGGGACACTGGAAGTCAGAACCTCCTAAGCAGTTCACAGAAAGTAGAGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQGHWKSEPPKQFTESRGTAGS*RASGAW Trigger: CCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACC...TCTACTTTCTGTGAACTGCTTAGGAGGTTCTGACTTCCAGTGTCCCTGCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAGGGACACTGGAAGTCAGAACCTCCTAAGCAGTTCACAGAAAGTAGAAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQGHWKSEPPKQFTESRSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...TCTACTTTCTGTGAACTGCTTAGGAGGTTCTGACTTCCAGTGTCCCTGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAATTGTTCTGGGCACTTaGATGGTAAAAGGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTIVLGT*MVKGDQ Trigger: CTGGTCACCTTTTACCATCCAAGTGCCCAGAACAAT...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110186.9 |
||
| 3UTR CAA 72 bp | GATATCTTGTGGCTGCTTTTGCCCCTCCTACTGCAGTaGATGGAGAAAGCAGGGACACTGGAAGTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: DILWLLLPLLLQ*MEKAGTLEVRT Trigger: GGTTCTGACTTCCAGTGTCCCTGCTTTCTCCATCAACTGCAGTAGGAGGGGCAAAAGCAGCCACAAGATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| 3UTR CAA 72 bp | TGGCACCTGGTAACTGCTTCCCTCCTACTTGATATCTaGTGGCTGCTTTTGCCCCTCCTACTGCAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: WHLVTASLLLDI*WLLLPLLLQLM Trigger: CATCAACTGCAGTAGGAGGGGCAAAAGCAGCCACAAGATATCAAGTAGGAGGGAAGCAGTTACCAGGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATTGGATGGTAAAAGGTaGCCAGGCTGCTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKLDGKR*PGCCSV Trigger: CACAGAGCAGCAGCCTGGTCACCTTTTACCATCCAA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110186.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAAAGAAACTGGTGTACTaGCTCTTGAGCACGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKKKLVY*LLSTPS Trigger: GCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTT...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGCTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPGHYPAWRKRKALGPGLLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACACTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKKKSSRARSDVSPVSTTLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGCTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRKALGPGLTSARCPLQLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCGATTCGCCTAGGTTTTaGTATATTGGGGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEKKKSSRARSDVSDSPRF*YIGVPC Trigger: ACAGGGAACCCCAATATACCAAAACCTAGGCGAATC...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAAAGGCAAATAGGTAGAACCAGGCTTATCCTAAGGAAGTGTGCACTGGGCTCCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QERQIGRTRLILRKCALGSFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGA...GCCCAGTGCACACTTCCTTAGGATAAGCCTGGTTCTACCTATTTGCCTTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR TCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACTCGGTACATCTCGATaGGCCGGGCGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREELGTSR*AGRPRA Trigger: AGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATTGACTGGTTTACCATaGCGGAAGAACTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKLTGLP*RKNSWV Trigger: GACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGTCGAAGCATCTCTGTaGAGATCTCAGCTACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKVEASL*RSQLQP Trigger: AGGCTGTAGCTGAGATCTGCACAGAGATGCTTCGAC...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSSRARSDVSPVSTTELPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGTATCCTTCCATAGAATTCACCTTCATTCCACGCAGCCTGCCTACCATTACTCTCGGCATTGACTaGTTTACCATGCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGYPSIEFTFIPRSLPTITLGID*FTMPEE Trigger: TTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGT...AATGGTAGGCAGGCTGCGTGGAATGAAGGTGAATTCTATGGAAGGATACCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAATGCCCAGGCGGTGGATaGCGGCCACCTTCTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKCPGGG*RPPSPW Trigger: CCACGGAGAAGGTGGCCGCCATCCACCGCCTGGGCA...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACCCGAGGGGATGATGTaGTGGGCGCCTGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKPEGMM*WAPGIS Trigger: GGAGATCCCAGGCGCCCATCACATCATCCCCTCGGG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR TCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAGTTGCTGCCCCAGGCTaGGCGCAGGATTCGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEVAAPG*AQDSPR Trigger: CCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAAC...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAACGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKRCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR GCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACCTGGTCCCAGTGGATaGAACGGACCGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEPGPSG*NGPASP Trigger: TGGGGAAGCCGGTCCGTTGCATCCACTGGGACCAGG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACCCGGAAGTATGGGTTaGTGCCCCAGGCTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKPGSMG*CPRLSA Trigger: TGCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS-3UTR CCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACCTCAACCACGTCCTTaGGGATGCGGCAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEPQPRP*GCGSHG Trigger: ACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAGAGGCCTGGTCCCAGTaGATGCAACGGACCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKEAWSQ*MQRTGF Trigger: GAAGCCGGTCCGTTGCATCCACTGGGACCAGGCCTC...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGATTCGCCTAGGTTTTaGTATATTGGGGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKDSPRF*YIGVPC Trigger: ACAGGGAACCCCAATATACCAAAACCTAGGCGAATC...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR TCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAATCCGTAGGCCACGACTaGGAGGGTCATCCGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREESVGHD*EGHPHC Trigger: ACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGA...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR TCA 90 bp | TGTTTAGGTTCTCTTATAGTAGACCCTGTGGCCAGCAGTAAGTTCATCAAGCCCCGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLGSLIVDPVASSKFIKPRCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...GGGCTTGATGAACTTACTGCTGGCCACAGGGTCTACTATAAGAGAACCTAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR TCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAATGGTGTACTGCCTCTTaGGCACGCCCAGCGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEWCTAS*ARPAKR Trigger: CCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCA...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR TCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACATCGCACCTCTCCATaGCAAGAGCCTCCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEHRTSP*QEPPPH Trigger: GTGGGGAGGAGGCTCTTGTCATGGAGAGGTGCGATG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR GCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAGGAAGTATGGGTTGCTaGCCCAGGCTGAGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEGSMGC*PRLSAG Trigger: TCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTCC...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR CCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAATTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAATTCCCGTGGGATCCATaGATCCAGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKFPWDP*IQVAPS Trigger: GCTGGGAGCCACCTGGATCCATGGATCCCACGGGAA...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR GCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACCGGAGAAGAGCACCTaGATGGGCTGTGAACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKPEKST*MGCELS Trigger: CGACAGTTCACAGCCCATGCAGGTGCTCTTCTCCGG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKSTCGV*PPRRRA Trigger: TGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACT...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAGCAGAGCACCGTGGGTaGTGGAGTAGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKAEHRG*WSSTCG Trigger: ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGC...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAGGGACACCTCATCTATaGTGTGGGAGCTGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEGTPHL*CGSCSH Trigger: GTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCC...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACGAAGCCACAGATCTTaGGGTACCAGAGCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREERSHRS*GTRAQV Trigger: CACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACGAAGCCACAGATCTTaGGGTACCAGAGCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKRSHRS*GTRAQV Trigger: CACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAGTACCAGAGCTCAGGTaGGTAGGTGAGGGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEVPELR*VGEGTA Trigger: AGCTGTACCCTCACCTACCCACCTGAGCTCTGGTAC...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAATTTCAGGGCCCCTGCTaGAAGAGGTCTCGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKFQGPC*KRSRYI Trigger: GATGTACCGAGACCTCTTCCAGCAGGGGCCCTGAAA...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAATCCACCTTCAGGTACTaGTGGATCATGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREESTFRY*WIMASF Trigger: GAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGA...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAACCTTCAGGTACTGCTaGATCATGGCGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKTFRYC*IMASFR Trigger: CCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGT...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAACCTCATCTATGCTGTaGGAGCTGCTCTCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKTSSML*ELLSQL Trigger: GAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGT...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAACCTCATCTATGCTGTaGGAGCTGCTCTCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREETSSML*ELLSQL Trigger: GAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGT...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR GCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAGTCGAAGCATCTCTGTaGAGATCTCAGCTACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKVEASL*RSQLQP Trigger: AGGCTGTAGCTGAGATCTGCACAGAGATGCTTCGAC...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAATTCTATGCGCTGTCTTaGAGCTCTCTGTGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREEFYALS*SSLCRA Trigger: TGCCCTACACAGAGAGCTCCAAGACAGCGCATAGAA...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110186.9 |
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| CDS-3UTR TCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREERCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR TCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACGTTGTATAAATCGCTaGATTCCTCAACCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKRCINR*IPQPRP Trigger: AGGACGTGGTTGAGGAATTCAGCGATTTATACAACG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CCA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YPKMQSIEGTCNNMREEKLPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CCA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACTTCCAAAAGGCCATTaGCTTCTGCTAGTTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YYPKMQSIEGTCNNMREELPKGH*LLLVDR Trigger: TCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCCCCTGCTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCCCCGGAAGTATGGGTaGCTGCCCCAGGCTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QGPCWKRSRYISMSRAASPRKYG*LPQAER Trigger: GCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGG...CGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAGCAGGGGCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
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| CDS GCA 90 bp | CGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTaGGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAGQRAEHRGWWSST*GVWPPRRRAPAWAV Trigger: CACAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110189.9 |
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| CDS GCA 90 bp | CGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTaGGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RAGQRAEHRGWWSST*GVWPPRRRAPAWAR Trigger: ACGAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110182.9 |
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| CDS-3UTR CAA 90 bp | TCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGAGAGCAGAGCAGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRYISMSRAASRWPESRAASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...TGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
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| CDS GCA 90 bp | CGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTaGGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAGQRAEHRGWWSST*GVWPPRRRAPAWAS Trigger: TGAAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110183.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTGGCCTCCCCGGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAEHRGWWSSTCGVWPPRASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...CCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 ENSMUST00000183947.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACCCCGGAAGTATGGGTaGCTGCCCCAGGCTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AWRKRKALGPGLTSARCPPRKYG*LPQAER Trigger: GCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGG...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
||
| CDS GCA 90 bp | AAGCACAGTGACATCCGTGAAGCCCTGCTCCAGAAGGGCTCTAGCTaGAGCCAGGCCAGCCAAGCCAGCACCGATCACCACCACACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHSDIREALLQKGSS*SQASQASTDHHHTR Trigger: CCTCGTGTGGTGGTGATCGGTGCTGGCTTGGCTGGCCTGGCTGCAGCTAGAGCCCTTCTGGAGCAGGGCTTCACGGATGTCACTGTGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000129143.8 ENSMUST00000131698.2 ENSMUST00000183575.8 ENSMUST00000183947.8 |
||
| CDS GCA 90 bp | CTTGCGGTACCAGAGCTCAGGTGGGTAGGTGAGGGTACAGCTCTCTaGCTCATCCTCCCACACGAACTGCAGGCTGTTGCACTCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAVPELRWVGEGTAL*LILPHELQAVALGA Trigger: GGCCCCGAGTGCAACAGCCTGCAGTTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTCACCTACCCACCTGAGCTCTGGTACCGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | GCCGAGGCCTGGTCCCAGTGGATGCAACGGACCGGCTTCCCCAACTaGATGACATGTGGAGGAATGCCCTCAGCCAGCAGCTCCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: AEAWSQWMQRTGFPN*MTCGGMPSASSSTT Trigger: AGTTGTGGAGCTGCTGGCTGAGGGCATTCCTCCACATGTCATCCAGTTGGGGAAGCCGGTCCGTTGCATCCACTGGGACCAGGCCTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | CCTCTTGAGCACGCCCAGCGAAACGGTCACAATCACGTGGTCCGCTaGGATCACCTCGCAATCCTCGCACTCCACGACTACAGGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: PLEHAQRNGHNHVVR*DHLAILALHDYRPR Trigger: CCGTGGCCTGTAGTCGTGGAGTGCGAGGATTGCGAGGTGATCCCAGCGGACCACGTGATTGTGACCGTTTCGCTGGGCGTGCTCAAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | AATGCCCAGGCGGTGGATGGCGGCCACCTTCTCCGTGGGCAGGCATaGCCTAAAGAAACTGGTGTACTGCCTCTTGAGCACGCCCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: NAQAVDGGHLLRGQA*PKETGVLPLEHAQR Trigger: TCGCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGCCTGCCCACGGAGAAGGTGGCCGCCATCCACCGCCTGGGCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | CCTGCATGGGCGCTGTCTTGGAGCTCTCTGTGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCGCCCCACTTGAGCCCACCTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PAWALSWSSLCRAGA*LASPHPPHLSPPVN Trigger: GTTCACAGGTGGGCTCAAGTGGGGCGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAGCGCCCATGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110188.8 |
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| CDS-3UTR CAA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: YPAWRKRKALGPGLTSARSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTTCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: PAWRKRKALGPGLTSARCSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTCCCCGGAAGTATGGGTaGCTGCCCCAGGCTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LEKKKSSRARSDVSPVSTPRKYG*LPQAER Trigger: GCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGG...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS TCA 90 bp | TCAGCCAGCAGCTCCACAACTCGCATGAAGCCCGAGGGGATGATGTaGTGGGCGCCTGGGATCTCCGTCCATTCTCCAAAGGCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SASSSTTRMKPEGMM*WAPGISVHSPKALR Trigger: CCTGAGCGCCTTTGGAGAATGGACGGAGATCCCAGGCGCCCATCACATCATCCCCTCGGGCTTCATGCGAGTTGTGGAGCTGCTGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS TCA 90 bp | AGGCCTGGTCCCAGTGGATGCAACGGACCGGCTTCCCCAACTGGATaGCATGTGGAGGAATGCCCTCAGCCAGCAGCTCCACAACTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPGPSGCNGPASPTG*HVEECPQPAAPQLA Trigger: TGCGAGTTGTGGAGCTGCTGGCTGAGGGCATTCCTCCACATGTCATCCAGTTGGGGAAGCCGGTCCGTTGCATCCACTGGGACCAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | CAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCTGTGAACTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QRAEHRGWWSSTCGV*PPRRRAPAWAVNCR Trigger: TCGACAGTTCACAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110189.9 |
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| CDS CCA 90 bp | CCCCGGAGAAGAGCACCTGCATGGGCTTCAGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGGTGGCCTCTGTGTCGTCAGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRRRAPAWASGTAGS*RASGAWWPLCRQGH Trigger: ATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGCCCATGCAGGTGCTCTTCTCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110183.9 |
||
| CDS CCA 90 bp | CAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCTTCAGGTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRAEHRGWWSSTCGV*PPRRRAPAWASGTA Trigger: AGCAGTACCTGAAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110183.9 |
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| CDS-3UTR CAA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTTCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: LEKKKSSRARSDVSPVSTSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGTCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSLEKKKSSRARSDVSPSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCAGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWRKRKALGPGLTSARCPASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...TGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | TACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YPAWRKRKALGPGLTSARASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...CCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS CCA 90 bp | AAGGTGGTGTCTCCAAGCCTCACACTCTGCACACGGCCCCCAATGTaGCTGGAAGCCTCAAGCACAGTGACATCCGTGAAGCCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVVSPSLTLCTRPPM*LEASSTVTSVKPCS Trigger: GGAGCAGGGCTTCACGGATGTCACTGTGCTTGAGGCTTCCAGCCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGGAGACACCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000129143.8 ENSMUST00000183947.8 |
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| CDS CCA 90 bp | CTCCACAACTCGCATGAAGCCCGAGGGGATGATGTGATGGGCGCCTaGGATCTCCGTCCATTCTCCAAAGGCGCTCAGGGACACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LHNSHEARGDDVMGA*DLRPFSKGAQGHLI Trigger: GATGAGGTGTCCCTGAGCGCCTTTGGAGAATGGACGGAGATCCCAGGCGCCCATCACATCATCCCCTCGGGCTTCATGCGAGTTGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | GTCCCAGTGGATGCAACGGACCGGCTTCCCCAACTGGATGACATGTaGAGGAATGCCCTCAGCCAGCAGCTCCACAACTCGCATGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPVDATDRLPQLDDM*RNALSQQLHNSHEA Trigger: GGCTTCATGCGAGTTGTGGAGCTGCTGGCTGAGGGCATTCCTCCACATGTCATCCAGTTGGGGAAGCCGGTCCGTTGCATCCACTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | GTGACAAGAGACCCAAGCCTCACACTCTGCACACGGCCCCCAATGTaGCTGGAAGCCTCAAGCACAGTGACATCCGTGAAGCCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTRDPSLTLCTRPPM*LEASSTVTSVKPCS Trigger: GGAGCAGGGCTTCACGGATGTCACTGTGCTTGAGGCTTCCAGCCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGGGTCTCTTGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| CDS-3UTR CAA 90 bp | CCTCGCGCTGGCCAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTTGCGCTCCCCATCTGTaGTCTCTTCCAAAAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRAGQRAEHRGWWSSTCGCAPHL*SLPKGH Trigger: ATGGCCTTTTGGAAGAGACAACAGATGGGGAGCGCA...ACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGTCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRKALGPGLTSARCPLQSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCTGGTGTACTGCCTCTaGAGCACGCCCAGCGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: PAWRKRKALGPGLTSARCLVYCL*STPSET Trigger: CGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAG...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS TCA 90 bp | CGATCACCACCACACGAGGCTGTCCCCTTCTCCGTAGGCCACGACTaGGAGGGTCATCCGCACTGTCGCCACTGGATTCACAACTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPPHEAVPFSVGHD*EGHPHCRHWIHNFA Trigger: TGCAAAGTTGTGAATCCAGTGGCGACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGAGAAGGGGACAGCCTCGTGTGGTGGTGATCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000129143.8 ENSMUST00000131698.2 ENSMUST00000183575.8 ENSMUST00000183947.8 |
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| CDS GCA 90 bp | GCCACCTTCTCCGTGGGCAGGCATGGCCTAAAGAAACTGGTGTACTaGCTCTTGAGCACGCCCAGCGAAACGGTCACAATCACGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATFSVGRHGLKKLVY*LLSTPSETVTITWS Trigger: GGACCACGTGATTGTGACCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGCCTGCCCACGGAGAAGGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | GTGTACTGCCTCTTGAGCACGCCCAGCGAAACGGTCACAATCACGTaGTCCGCTGGGATCACCTCGCAATCCTCGCACTCCACGACTACA | + |
|
Preference number: 5 (lower is better) Translates to: VYCLLSTPSETVTIT*SAGITSQSSHSTTT Trigger: TGTAGTCGTGGAGTGCGAGGATTGCGAGGTGATCCCAGCGGACCACGTGATTGTGACCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | AGCTTCTATGCGCTGTCTTGGAGCTCTCTGTGTAGGGCAGGGGCTTaGCTAGCTTCTCCACATCCGCCCCACTTGAGCCCACCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFYALSWSSLCRAGA*LASPHPPHLSPPVC Trigger: ACACACAGGTGGGCTCAAGTGGGGCGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAGCGCATAGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110186.9 |
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| CDS-3UTR CAA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EKKKSSRARSDVSPVSTTASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS TCA 90 bp | TCTCTGTGCAGATCTCAGCTACAGCCTCGTCATCGCACCTCTCCATaGCAAGAGCCTCCTCCCCACAGATCCAGCCACTCAGCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCRSQLQPRHRTSP*QEPPPHRSSHSAHG Trigger: GCCATGTGCTGAGTGGCTGGATCTGTGGGGAGGAGGCTCTTGTCATGGAGAGGTGCGATGACGAGGCTGTAGCTGAGATCTGCACAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | CTCCTCCCCACAGATCCAGCCACTCAGCACATGGCCATAGCGCTCTaGCGGATAAAGGACATCGAAGCCACAGATCTTGCGGTACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLPTDPATQHMAIAL*RIKDIEATDLAVPE Trigger: CTCTGGTACCGCAAGATCTGTGGCTTCGATGTCCTTTATCCGCCAGAGCGCTATGGCCATGTGCTGAGTGGCTGGATCTGTGGGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | CAGAGAGCAGAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCTCGTTGTATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QRAEHRGWWSSTCGV*PPRRRAPAWARCIN Trigger: ATTTATACAACGAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110182.9 |
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| CDS-3UTR CAA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPSLEKKKSSRARSDVSASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCTGGTGTACTGCCTCTaGAGCACGCCCAGCGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: HYPAWRKRKALGPGLTSALVYCL*STPSET Trigger: CGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAG...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CAA 90 bp | CTGGAAGAGGTCTCGGTACATCTCGATGAGCCGGGCGGCCTCGCGCTGGCCAGACTAGGTTTTGGTATATaGGGGTTCCCTTCAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LEEVSVHLDEPGGLALARLGFGI*GFPSGT Trigger: AGTACCTGAAGGGAACCCCAATATACCAAAACCTAG...TCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTACCGAGACCTCTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
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| CDS GCA 90 bp | GGATCTCCGTCCATTCTCCAAAGGCGCTCAGGGACACCTCATCTATaGTGTGGGAGCTGCTCTCACAGCTCTCCACCTTCAGGTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSPSILQRRSGTPHL*CGSCSHSSPPSGTA Trigger: AGCAGTACCTGAAGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCCTGAGCGCCTTTGGAGAATGGACGGAGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | TCCGTCCATTCTCCAAAGGCGCTCAGGGACACCTCATCTATGCTGTaGGAGCTGCTCTCACAGCTCTCCACCTTCAGGTACTGCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SVHSPKALRDTSSML*ELLSQLSTFRYCWI Trigger: GATCCAGCAGTACCTGAAGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCCTGAGCGCCTTTGGAGAATGGACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 90 bp | AAAGGTGACCAGGCTGCTGCTCTGTGGAGCTTCTATGCGCTGTCTTaGAGCTCTCTGTGTAGGGCAGGGGCTTGGCTAGCTTCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: KGDQAAALWSFYALS*SSLCRAGAWLASPH Trigger: ATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAGCGCATAGAAGCTCCACAGAGCAGCAGCCTGGTCACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110186.9 |
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| CDS-3UTR CAA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCTGGTGTACTGCCTCTaGAGCACGCCCAGCGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: SLPSLEKKKSSRARSDVSLVYCL*STPSET Trigger: CGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAG...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCAGGGAGAAGTCTTCCAGGGGAATCTCACTCAGCAGGCACAAACAGAGGGTCGAAGCCACAGATCTaGCGGTACCAGAGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WAGRSLPGESHSAGTNRGSKPQI*RYQSSG Trigger: ACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGA...CCCTCTGTTTGTGCCTGCTGAGTGAGATTCCCCTGGAAGACTTCTCCCTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CAA 90 bp | TTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGTGCGCTCCCCATCTGTaGTCTCTTCCAAAAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPSLEKKKSSRARSDVSPCAPHL*SLPKGH Trigger: ATGGCCTTTTGGAAGAGACAACAGATGGGGAGCGCA...CGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTTGCGCTCCCCATCTGTaGTCTCTTCCAAAAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LEKKKSSRARSDVSPVSTCAPHL*SLPKGH Trigger: ATGGCCTTTTGGAAGAGACAACAGATGGGGAGCGCA...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAATCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAAAGGCAAATAGGTAGAACCAGGCTTATCCTAAGGAAGTGTGCACTGGGCTCCTCAACCACGTCCTaGGGGATGCGGCAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: QERQIGRTRLILRKCALGSSTTS*GMRQPR Trigger: CCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGA...GCCCAGTGCACACTTCCTTAGGATAAGCCTGGTTCTACCTATTTGCCTTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGTCGAAGCCACAGATCTaGCGGTACCAGAGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RKRKALGPGLTSARCPLQSKPQI*RYQSSG Trigger: ACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGA...CTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CAA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGTCGAAGCCACAGATCTaGCGGTACCAGAGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPGHYPAWRKRKALGPGLSKPQI*RYQSSG Trigger: ACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGA...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS CCA 90 bp | TCAAATTCAAGGAAGATCTTGTCAGTGGTACCAATGCCCAGGCGGTaGATGGCGGCCACCTTCTCCGTGGGCAGGCATGGCCTAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SNSRKILSVVPMPRR*MAATFSVGRHGLKK Trigger: TTTCTTTAGGCCATGCCTGCCCACGGAGAAGGTGGCCGCCATCCACCGCCTGGGCATTGGTACCACTGACAAGATCTTCCTTGAATTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS CCA 90 bp | ATAAAGGACATCGAAGCCACAGATCTTGCGGTACCAGAGCTCAGGTaGGTAGGTGAGGGTACAGCTCTCTGCCTCATCCTCCCACACGAA | + |
|
Preference number: 5 (lower is better) Translates to: IKDIEATDLAVPELR*VGEGTALCLILPHE Trigger: TTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTCACCTACCCACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGATGTCCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS CCA 90 bp | CTAGGTTTTGGTATATTGGGGTTCCCTTCAGGTACTGCTGGATCATaGCGAGCTTCAGGCGCTTGGTGGCCTCTGTGTCGTCAGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGFGILGFPSGTAGS*RASGAWWPLCRQGH Trigger: ATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGGAACCCCAATATACCAAAACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGTGCGCTCCCCATCTGTaGTCTCTTCCAAAAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPGHYPAWRKRKALGPGLCAPHL*SLPKGH Trigger: ATGGCCTTTTGGAAGAGACAACAGATGGGGAGCGCA...CAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CAA 90 bp | CATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCTGCGCTCCCCATCTGTaGTCTCTTCCAAAAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HYPAWRKRKALGPGLTSACAPHL*SLPKGH Trigger: ATGGCCTTTTGGAAGAGACAACAGATGGGGAGCGCA...GGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 10 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGGAAGCAGAACCCCACCTGGTCATTACCCAGCCTGGAGAAAAAGAAAAGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAGSRTPPGHYPAWRKRKASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...TTTTCTTTTTCTCCAGGCTGGGTAATGACCAGGTGGGGTTCTGCTTCCTGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
||
| CDS-3UTR CAA 90 bp | TCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCTCGAAGCCACAGATCTaGCGGTACCAGAGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPSLEKKKSSRARSDVSSKPQI*RYQSSG Trigger: ACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGA...GCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CAA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCATCGAAGCCACAGATCTaGCGGTACCAGAGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHYPAWRKRKALGPGLTSSKPQI*RYQSSG Trigger: ACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGA...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CAA 90 bp | CCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTAATTCAAGGAAGATCTaGTCAGTGGTACCAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAWRKRKALGPGLTSARCNSRKI*SVVPMP Trigger: GGGCATTGGTACCACTGACAAGATCTTCCTTGAATT...ACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CAA 90 bp | CTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTCTAGGTTTTGGTATATaGGGGTTCCCTGTGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LEKKKSSRARSDVSPVSTLGFGI*GFPVNC Trigger: ACAGTTCACAGGGAACCCCAATATACCAAAACCTAG...AGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR CAA 90 bp | GAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACACTAGGTTTTGGTATATaGGGGTTCCCTGTGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: EKKKSSRARSDVSPVSTTLGFGI*GFPVNC Trigger: ACAGTTCACAGGGAACCCCAATATACCAAAACCTAG...TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR CAA 90 bp | GGTCATTACCCAGCCTGGAGAAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAACCTGCATGGGCTCGTaGTATAAATCGCTGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: GHYPAWRKRKALGPGLTSTCMGS*YKSLNS Trigger: GGAATTCAGCGATTTATACAACGAGCCCATGCAGGT...TGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110182.9 |
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| CDS-3UTR CAA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAAAATTCAAGGAAGATCTaGTCAGTGGTACCAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KKKSSRARSDVSPVSTTENSRKI*SVVPMP Trigger: GGGCATTGGTACCACTGACAAGATCTTCCTTGAATT...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS-3UTR CAA 90 bp | AAAAAGAAAAGCTCTCGGGCCAGGTCTGACGTCAGCCCGGTGTCCACTACAGAACTAGGTTTTGGTATATaGGGGTTCCCTTCAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: KKKSSRARSDVSPVSTTELGFGI*GFPSGT Trigger: AGTACCTGAAGGGAACCCCAATATACCAAAACCTAG...TTCTGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110179.9 |
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| CDS-3UTR CAA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAACCCCGGAAGTATGGGTaGCTGCCCCAGGCTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: YYPKMQSIEGTCNNMREEPRKYG*LPQAER Trigger: GCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGG...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR CAA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACCCCGGAAGTATGGGTaGCTGCCCCAGGCTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: YPKMQSIEGTCNNMREEKPRKYG*LPQAER Trigger: GCGCTCAGCCTGGGGCAGCAACCCATACTTCCGGGG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS-3UTR CAA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YYPKMQSIEGTCNNMREEASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YPKMQSIEGTCNNMREEKASFRR*VASVSS Trigger: TGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGC...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000183947.8 |
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| CDS-3UTR CAA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACCACATCCGCCCCACTaGAGCCCACCTGTGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: YPKMQSIEGTCNNMREEKPHPPH*SPPVNC Trigger: ACAGTTCACAGGTGGGCTCAAGTGGGGCGGATGTGG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110188.8 |
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| CDS-3UTR CAA 90 bp | CCAATATGCTGTCACCAAACAAACATTTTGAAGCTCCTTATTCCCATGGGGTTCCTAGGTTTTGGTATATaGGGGTTCCCTGTGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PICCHQTNILKLLIPMGFLGFGI*GFPVNC Trigger: ACAGTTCACAGGGAACCCCAATATACCAAAACCTAG...GAACCCCATGGGAATAAGGAGCTTCAAAATGTTTGTTTGGTGACAGCATATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
||
| CDS-3UTR CAA 90 bp | TATTATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAATTCAAGGAAGATCTaGTCAGTGGTACCAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YYPKMQSIEGTCNNMREENSRKI*SVVPMP Trigger: GGGCATTGGTACCACTGACAAGATCTTCCTTGAATT...TTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CAA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAAAATTCAAGGAAGATCTaGTCAGTGGTACCAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YPKMQSIEGTCNNMREEKNSRKI*SVVPMP Trigger: GGGCATTGGTACCACTGACAAGATCTTCCTTGAATT...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS-3UTR CAA 90 bp | TATCCCAAAATGCAAAGTATTGAAGGCACTTGCAATAACATGAGAGAGGAAAAACTAGGTTTTGGTATATaGGGGTTCCCTGTGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: YPKMQSIEGTCNNMREEKLGFGI*GFPVNC Trigger: ACAGTTCACAGGGAACCCCAATATACCAAAACCTAG...TTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 |
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| CDS GCA 72 bp | ACTACAGGCCACGGCTCATCCTCGTCCCACCTCCCCTaGTGCGGATTCTCTCCACTCTGGCCACCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TTGHGSSSSHLP*CGFSPLWPPSP Trigger: TGGGGAGGGTGGCCAGAGTGGAGAGAATCCGCAGCAGGGGAGGTGGGACGAGGATGAGCCGTGGCCTGTAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | GAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: EHRGWWSSTCGV*PPRRRAPAWAR Trigger: ACGAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110182.9 |
||
| CDS TCA 72 bp | CCACACGAGGCTGTCCCCTTCTCCGTAGGCCACGACTaGGAGGGTCATCCGCACTGTCGCCACTGGATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PHEAVPFSVGHD*EGHPHCRHWIH Trigger: GTGAATCCAGTGGCGACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGAGAAGGGGACAGCCTCGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000129143.8 ENSMUST00000131698.2 ENSMUST00000183575.8 ENSMUST00000183947.8 |
||
| CDS GCA 72 bp | CTGGAAGCCTCAAGCACAGTGACATCCGTGAAGCCCTaGTCCAGAAGGGCTCTAGCTGCAGCCAGGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LEASSTVTSVKP*SRRALAAARPA Trigger: GGCTGGCCTGGCTGCAGCTAGAGCCCTTCTGGAGCAGGGCTTCACGGATGTCACTGTGCTTGAGGCTTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000129143.8 ENSMUST00000183575.8 ENSMUST00000183947.8 |
||
| CDS CCA 72 bp | GGGATCCATGGATCCAGGTGGCTCCCAGCTCAAAGGTaGTGTCTCCAAGCCTCACACTCTGCACACGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GIHGSRWLPAQR*CLQASHSAHGP Trigger: GGGGCCGTGTGCAGAGTGTGAGGCTTGGAGACACCACCTTTGAGCTGGGAGCCACCTGGATCCATGGATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000129143.8 ENSMUST00000183947.8 |
||
| CDS CCA 72 bp | AGGAAGATCTTGTCAGTGGTACCAATGCCCAGGCGGTaGATGGCGGCCACCTTCTCCGTGGGCAGGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKILSVVPMPRR*MAATFSVGRHG Trigger: GCCATGCCTGCCCACGGAGAAGGTGGCCGCCATCCACCGCCTGGGCATTGGTACCACTGACAAGATCTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
||
| CDS CCA 72 bp | GAGCACCGTGGGTGGTGGAGTAGTACTTGCGGTGTGTaGCCTCCCCGGAGAAGAGCACCTGCATGGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EHRGWWSSTCGV*PPRRRAPAWAS Trigger: TGAAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTACTACTCCACCACCCACGGTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110183.9 |
||
| CDS CAA 90 bp | GGGGTTCCCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCAGGGTCATCCCTGATGCGATTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GVPFRYCWIMASFRR*VASVSSGSSLMRFR Trigger: GCGGAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGGAACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
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| CDS CCA 72 bp | TCGCATGAAGCCCGAGGGGATGATGTGATGGGCGCCTaGGATCTCCGTCCATTCTCCAAAGGCGCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SHEARGDDVMGA*DLRPFSKGAQG Trigger: TCCCTGAGCGCCTTTGGAGAATGGACGGAGATCCCAGGCGCCCATCACATCATCCCCTCGGGCTTCATGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | CACGCCCAGCGAAACGGTCACAATCACGTGGTCCGCTaGGATCACCTCGCAATCCTCGCACTCCACGACTAC | + |
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Preference number: 6 (lower is better) Translates to: HAQRNGHNHVVR*DHLAILALHDY Trigger: GTAGTCGTGGAGTGCGAGGATTGCGAGGTGATCCCAGCGGACCACGTGATTGTGACCGTTTCGCTGGGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | CTCTTGAGCACGCCCAGCGAAACGGTCACAATCACGTaGTCCGCTGGGATCACCTCGCAATCCTCGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LLSTPSETVTIT*SAGITSQSSHS Trigger: GGAGTGCGAGGATTGCGAGGTGATCCCAGCGGACCACGTGATTGTGACCGTTTCGCTGGGCGTGCTCAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | GCGGTGGATGGCGGCCACCTTCTCCGTGGGCAGGCATaGCCTAAAGAAACTGGTGTACTGCCTCTTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: AVDGGHLLRGQA*PKETGVLPLEH Trigger: GTGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGCCTGCCCACGGAGAAGGTGGCCGCCATCCACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CAA 90 bp | CTCTCCACCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCAGGGTCATCCCTGATGCGATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LSTFRYCWIMASFRR*VASVSSGSSLMRFR Trigger: GCGGAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CAA 90 bp | AAGGGCTCCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCAGGGTCATCCCTGATGCGATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: KGSFRYCWIMASFRR*VASVSSGSSLMRFR Trigger: GCGGAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGGAGCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110181.8 |
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| CDS CAA 90 bp | TGCATGGGCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCAGGGTCATCCCTGATGCGATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: CMGFRYCWIMASFRR*VASVSSGSSLMRFR Trigger: GCGGAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGCCCATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110183.9 |
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| CDS GCA 72 bp | CCAGAGCTCAGGTGGGTAGGTGAGGGTACAGCTCTCTaGCTCATCCTCCCACACGAACTGCAGGCTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PELRWVGEGTAL*LILPHELQAVA Trigger: TGCAACAGCCTGCAGTTCGTGTGGGAGGATGAGGCAGAGAGCTGTACCCTCACCTACCCACCTGAGCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | GATGCAACGGACCGGCTTCCCCAACTGGATGACATGTaGAGGAATGCCCTCAGCCAGCAGCTCCACAACTCG | + |
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Preference number: 6 (lower is better) Translates to: DATDRLPQLDDM*RNALSQQLHNS Trigger: CGAGTTGTGGAGCTGCTGGCTGAGGGCATTCCTCCACATGTCATCCAGTTGGGGAAGCCGGTCCGTTGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | TGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCTGCATaGGCTGTGAACTGTCGAAGCATCTCTGTGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: CGVWPPRRRAPA*AVNCRSISVQI Trigger: GATCTGCACAGAGATGCTTCGACAGTTCACAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110189.9 |
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| CDS CCA 72 bp | CAGGCTGCTGCTCTGTGGAGCTTCTATGCGCTGTCTTaGAGCTCTCTGTGTAGGGCAGGGGCTTGGCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: QAAALWSFYALS*SSLCRAGAWLA Trigger: AGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGACAGCGCATAGAAGCTCCACAGAGCAGCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110186.9 |
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| CDS CCA 72 bp | GACCCAAGCCTCACACTCTGCACACGGCCCCCAATGTaGCTGGAAGCCTCAAGCACAGTGACATCCGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: DPSLTLCTRPPM*LEASSTVTSVK Trigger: CTTCACGGATGTCACTGTGCTTGAGGCTTCCAGCCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183575.8 |
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| CDS CAA 90 bp | TTCTCCGTGGGCAGGCATGGCCTAAAGAAACTGGTGTACTGCCTCTaGAGCACGCCCAGCGAAACGGTCACAATCACGTGGTCCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: FSVGRHGLKKLVYCL*STPSETVTITWSAG Trigger: CCCAGCGGACCACGTGATTGTGACCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGCCTGCCCACGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CAA 90 bp | ATAGCGCTCTTCAGGTACTGCTGGATCATGGCGAGCTTCAGGCGCTaGGTGGCCTCTGTGTCGTCAGGGTCATCCCTGATGCGATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: IALFRYCWIMASFRR*VASVSSGSSLMRFR Trigger: GCGGAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAGAGCGCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183947.8 |
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| CDS TCA 72 bp | AGCTCCACAACTCGCATGAAGCCCGAGGGGATGATGTaGTGGGCGCCTGGGATCTCCGTCCATTCTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SSTTRMKPEGMM*WAPGISVHSPK Trigger: CTTTGGAGAATGGACGGAGATCCCAGGCGCCCATCACATCATCCCCTCGGGCTTCATGCGAGTTGTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS GCA 72 bp | AGGCGCTCAGGGACACCTCATCTATGCTGTGGGAGCTaGTCTCACAGCTCTCCACCTTCAGGTACTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RRSGTPHLCCGS*SHSSPPSGTAG Trigger: TCCAGCAGTACCTGAAGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCCTGAGCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS GCA 72 bp | TACTTGCGGTGTGTGGCCTCCCCGGAGAAGAGCACCTaGATGGGCTGTGAACTGTCGAAGCATCTCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: YLRCVASPEKST*MGCELSKHLCA Trigger: TGCACAGAGATGCTTCGACAGTTCACAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACACCGCAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110189.9 |
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| CDS CCA 72 bp | TCTCCAAGCCTCACACTCTGCACACGGCCCCCAATGTaGCTGGAAGCCTCAAGCACAGTGACATCCGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPSLTLCTRPPM*LEASSTVTSVK Trigger: CTTCACGGATGTCACTGTGCTTGAGGCTTCCAGCCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENSMUST00000028806.12 ENSMUST00000110179.9 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110182.9 ENSMUST00000110183.9 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 ENSMUST00000129143.8 ENSMUST00000183947.8 |
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| CDS TCA 72 bp | AGATCTCAGCTACAGCCTCGTCATCGCACCTCTCCATaGCAAGAGCCTCCTCCCCACAGATCCAGCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: RSQLQPRHRTSP*QEPPPHRSSHS Trigger: TGAGTGGCTGGATCTGTGGGGAGGAGGCTCTTGTCATGGAGAGGTGCGATGACGAGGCTGTAGCTGAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS GCA 72 bp | TCCGTGGGCAGGCATGGCCTAAAGAAACTGGTGTACTaGCTCTTGAGCACGCCCAGCGAAACGGTCACAATC | + |
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Preference number: 6 (lower is better) Translates to: SVGRHGLKKLVY*LLSTPSETVTI Trigger: GATTGTGACCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGCCTGCCCACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS GCA 72 bp | CCTCAAATTCAAGGAAGATCTTGTCAGTGGTACCAATaGCCAGGCGGTGGATGGCGGCCACCTTCTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: PQIQGRSCQWYQ*PGGGWRPPSPW Trigger: CCACGGAGAAGGTGGCCGCCATCCACCGCCTGGGCATTGGTACCACTGACAAGATCTTCCTTGAATTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | TCTCCAAAGGCGCTCAGGGACACCTCATCTATGCTGTaGGAGCTGCTCTCACAGCTCTCCACCTTCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SPKALRDTSSML*ELLSQLSTFRY Trigger: GTACCTGAAGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCCTGAGCGCCTTTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | ATCGAAGCCACAGATCTTGCGGTACCAGAGCTCAGGTaGGTAGGTGAGGGTACAGCTCTCTGCCTCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: IEATDLAVPELR*VGEGTALCLIL Trigger: GAGGATGAGGCAGAGAGCTGTACCCTCACCTACCCACCTGAGCTCTGGTACCGCAAGATCTGTGGCTTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CAA 72 bp | GGCAGGCATGGCCTAAAGAAACTGGTGTACTGCCTCTaGAGCACGCCCAGCGAAACGGTCACAATCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: GRHGLKKLVYCL*STPSETVTITW Trigger: CCACGTGATTGTGACCGTTTCGCTGGGCGTGCTCAAGAGGCAGTACACCAGTTTCTTTAGGCCATGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028806.12 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS GCA 72 bp | TCCATTCTCCAAAGGCGCTCAGGGACACCTCATCTATaGTGTGGGAGCTGCTCTCACAGCTCTCCACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SILQRRSGTPHL*CGSCSHSSPPS Trigger: TGAAGGTGGAGAGCTGTGAGAGCAGCTCCCACAGCATAGATGAGGTGTCCCTGAGCGCCTTTGGAGAATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110180.2 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS CCA 72 bp | ACAGATCCAGCCACTCAGCACATGGCCATAGCGCTCTaGCGGATAAAGGACATCGAAGCCACAGATCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: TDPATQHMAIAL*RIKDIEATDLA Trigger: CGCAAGATCTGTGGCTTCGATGTCCTTTATCCGCCAGAGCGCTATGGCCATGTGCTGAGTGGCTGGATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028806.12 ENSMUST00000110181.8 ENSMUST00000110186.9 ENSMUST00000110188.8 ENSMUST00000110189.9 |
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| CDS TCA 72 bp | AGAAGAGCACCTGCATGGGCTCGTTGTATAAATCGCTaGATTCCTCAACCACGTCCTTGGGGATGCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRAPAWARCINR*IPQPRPWGCGS Trigger: GCTGCCGCATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAGCCCATGCAGGTGCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110182.9 |
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| CDS CAA 72 bp | CAGGCTGAGCGCAGGATTCGCCTAGGTTTTGGTATATaGGGGTTCCCTTCAGGTACTGCTGGATCATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: QAERRIRLGFGI*GFPSGTAGSWR Trigger: TCGCCATGATCCAGCAGTACCTGAAGGGAACCCCAATATACCAAAACCTAGGCGAATCCTGCGCTCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110179.9 ENSMUST00000183881.2 |
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