Pregenerated sensors for SMOC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023886Ensembl transcript IDs: ENSMUST00000024660.9, ENSMUST00000232923.2, ENSMUST00000233344.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGATGTGGTCCATGATCTCTGTAGAAGGCATTTTTCCTTTCCAGTaGACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RMWSMISVEGIFPFQ*TLAGWPRHSEVRQV Trigger: TACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGTCCACTGGAAAGGAAAAATGCCTTCTACAGAGATCATGGACCACATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR GCA 90 bp | AACCTTCATCCCATAGTGGCCTTGGGTGAATTCCCTCAAACCCGATaGCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: NLHPIVALGEFPQTR*LHKMKLTFSAACCS Trigger: TGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGGAATTCACCCAAGGCCACTATGGGATGAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR TCA 90 bp | CCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATGTaGTTAATTTCCCGAAGCCAGCCTTCCGTTTTCACAGATCACAAC | + |
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Preference number: 1 (lower is better) Translates to: PAQILKVKQGHIHCM*LISRSQPSVFTDHN Trigger: GTTGTGATCTGTGAAAACGGAAGGCTGGCTTCGGGAAATTAATCACATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR TCA 90 bp | AGATTATCCAAAACAGTTAGGATCATACTCGTTTGTAGACAGCATTaGCATGAGCCGGTCACTTCTTGCCTCTACACAGTTCAAATGAGC | + |
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Preference number: 1 (lower is better) Translates to: RLSKTVRIILVCRQH*HEPVTSCLYTVQMS Trigger: GCTCATTTGAACTGTGTAGAGGCAAGAAGTGACCGGCTCATGTCAATGCTGTCTACAAACGAGTATGATCCTAACTGTTTTGGATAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTGTTAGATGTGCTCTCTaGAAGAGGACTCTCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TLAGWPRHSEVRQVDWILVRCAL*KRTLWL Trigger: CAGCCAGAGAGTCCTCTTTCAGAGAGCACATCTAAC...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGAGAGGACTCTCTGGCTaGTTGTCCATTCAGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PSNPMPPQNEIDILSCLLRGLSG*LSIQLP Trigger: GGGGAGCTGAATGGACAAGCAGCCAGAGAGTCCTCT...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCAGTGAGGCAGGTAGACTaGATCCTTCCTGGGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSVRQVD*ILPGPM Trigger: CATTGGCCCAGGAAGGATCCAGTCTACCTGCCTCAC...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCTCCTTCCTGGGCCAATaGGATGGAGTCGGCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TMNNFPYKPQSERIAPALSFLGQ*DGVGRP Trigger: TGGCCTGCCGACTCCATCTCATTGGCCCAGGAAGGA...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGAAGAGGACTCTCTGGCTaGTTGTCCATTCAGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LHKMKLTFSAACCSALLGRGLSG*LSIQLP Trigger: GGGGAGCTGAATGGACAAGCAGCCAGAGAGTCCTCT...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATGATCTCTGTAGAAGGCATTTTTCCTTTCCAGTGGACCCTAGCAGGATGGTCAAGCAGGGGCTACTaGAAGTTAAGGCTATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SMISVEGIFPFQWTLAGWSSRGY*KLRLCL Trigger: CAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGA...CCATCCTGCTAGGGTCCACTGGAAAGGAAAAATGCCTTCTACAGAGATCATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR CAA 90 bp | CACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTaGGGACGATGTAGTCTAGCTGTGCCTTCCTCAGGATGTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: HKMKLTFSAACCSAL*GRCSLAVPSSGCGP Trigger: TGGACCACATCCTGAGGAAGGCACAGCTAGACTACATCGTCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR GCA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAACAAGCCAACGGAGACTaGAGGCAGAGGAAAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: HLQTYIERLGTMNNFPYKQANGD*RQRKGQ Trigger: TTGCCCTTTCCTCTGCCTGCAGTCTCCGTTGGCTTG...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGGCCTTCCTCAGGATGTaGTCCATGATCTCTGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: PPQNEIDILSCLLFSTLGAFLRM*SMISVE Trigger: TTCTACAGAGATCATGGACCACATCCTGAGGAAGGC...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR TCA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCATTAATTGCTCTTTGGTaGGGGAAAATTCCCACATGT | + |
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Preference number: 2 (lower is better) Translates to: STEGRGSEVEMHLKPTPPLIALW*GKIPTC Trigger: ACATGTGGGAATTTTCCCTCACCAAAGAGCAATTAA...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGCACATACATTGTATGTaGTTAATTTCCCGAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSNPMPPQNEIDILSCLLHIHCM*LISRSQ Trigger: CTGGCTTCGGGAAATTAATCACATACAATGTATGTG...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGACACATACATTGTATGTaGTTAATTTCCCGAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LHKMKLTFSAACCSALLGHIHCM*LISRSQ Trigger: CTGGCTTCGGGAAATTAATCACATACAATGTATGTG...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCATTGACATTCTCAGCTaGCTGTTGTTCAGCACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TMNNFPYKPQSERIAPALIDILS*LLFSTL Trigger: AAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAAT...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAATTAATTGCTCTTTGGTaGGGGAAAATTCCCACATGT | + |
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Preference number: 2 (lower is better) Translates to: HLQTYIERLGTMNNFPYKLIALW*GKIPTC Trigger: ACATGTGGGAATTTTCCCTCACCAAAGAGCAATTAA...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR CCA 72 bp | GGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTaGATCCTTCCTGGGCCAATGAGATGGAGTCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GWPRHSEVRQVD*ILPGPMRWSRQ Trigger: CTGCCGACTCCATCTCATTGGCCCAGGAAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR CCA 72 bp | GAAGGCATTTTTCCTTTCCAGTGGACCCTAGCAGGATaGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGG | + |
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Preference number: 3 (lower is better) Translates to: EGIFPFQWTLAG*PRHSEVRQVDW Trigger: CCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGTCCACTGGAAAGGAAAAATGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR CCA 72 bp | GTTGGTAGAGATCCTTGCCTAGCACGAAAGGGGTCCTaGGTTCAGTCCCCAGCAGACCATAAACCACGAGTG | + |
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Preference number: 3 (lower is better) Translates to: VGRDPCLARKGS*VQSPADHKPRV Trigger: CACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCCCTTTCGTGCTAGGCAAGGATCTCTACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
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| 3UTR GCA 72 bp | GAGTTAGATGTGCTCTCTGAAAGAGGACTCTCTGGCTaGTTGTCCATTCAGCTCCCCGGGGATTTAACAGTA | + |
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Preference number: 3 (lower is better) Translates to: ELDVLSERGLSG*LSIQLPGDLTV Trigger: TACTGTTAAATCCCCGGGGAGCTGAATGGACAAGCAGCCAGAGAGTCCTCTTTCAGAGAGCACATCTAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR GCA 72 bp | CCCATAGTGGCCTTGGGTGAATTCCCTCAAACCCGATaGCTCCACAAAATGAAATTGACATTCTCAGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: PIVALGEFPQTR*LHKMKLTFSAA Trigger: GGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGGAATTCACCCAAGGCCACTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR CAA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCAGTTTTTAATTGCTCTTaGGTGAGGGAAAATTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: STEGRGSEVEMHLKPTPPVFNCS*VRENSH Trigger: GTGGGAATTTTCCCTCACCAAAGAGCAATTAAAAAC...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR CAA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCAACAAGGACACATACATaGTATGTGATTAATTTCCCG | + |
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Preference number: 3 (lower is better) Translates to: STEGRGSEVEMHLKPTPPTRTHT*YVINFP Trigger: CGGGAAATTAATCACATACAATGTATGTGTCCTTGT...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR CAA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCGTTTTTAATTGCTCTTaGGTGAGGGAAAATTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: TMNNFPYKPQSERIAPALVFNCS*VRENSH Trigger: GTGGGAATTTTCCCTCACCAAAGAGCAATTAAAAAC...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR TCA 72 bp | ATCTTGAAGGTCAAACAAGGACACATACATTGTATGTaGTTAATTTCCCGAAGCCAGCCTTCCGTTTTCACA | + |
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Preference number: 3 (lower is better) Translates to: ILKVKQGHIHCM*LISRSQPSVFT Trigger: TGTGAAAACGGAAGGCTGGCTTCGGGAAATTAATCACATACAATGTATGTGTCCTTGTTTGACCTTCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| 3UTR-3UTR CAA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCACAAGGACACATACATaGTATGTGATTAATTTCCCG | + |
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Preference number: 3 (lower is better) Translates to: TMNNFPYKPQSERIAPALTRTHT*YVINFP Trigger: CGGGAAATTAATCACATACAATGTATGTGTCCTTGT...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR GCA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTCTGGCTCTGACAGCCTaGCAGAAGAGGAAGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TLAGWPRHSEVRQVDWILLALTA*QKRKRG Trigger: ACCCCTCTTCCTCTTCTGGCAGGCTGTCAGAGCCAG...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | AGGGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGGTTGTTCACACTTCTGAGGGGAGCTTaGGCAGTCCAGGCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RGPGFSPQQTINHEWLFTLLRGA*AVQAAV Trigger: GACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAG...TGTGAACAACCACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
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| CDS-3UTR CCA 90 bp | AAGGGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGGTTGTTCACGTCCGAGGCACAGAGTaGCTTCTGAGGGGAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KGSWVQSPADHKPRVVVHVRGTE*LLRGAW Trigger: CCAAGCTCCCCTCAGAAGCCACTCTGTGCCTCGGAC...GTGAACAACCACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
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| CDS-3UTR CCA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTAGCGATCTCCAGCTGTaGATCTTTGCACTTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TLAGWPRHSEVRQVDWILSDLQL*IFALGP Trigger: CGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCT...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCCTCTCCTCCAGGGTGTaGCTGGGGTCTGGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSLSSRV*LGSGSD Trigger: GTCAGAGCCAGACCCCAGCCACACCCTGGAGGAGAG...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR GCA 90 bp | GGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGGTTGTTCACATCCCAGCTGTGGATCTTTaGACTTGGCCCGCTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: GSWVQSPADHKPRVVVHIPAVDL*TWPAGT Trigger: AGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGG...GATGTGAACAACCACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
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| CDS-3UTR CCA 90 bp | CGAAAGGGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGGTTGTTAGCGATCTCCAGCTGTaGATCTTTGCACTTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RKGSWVQSPADHKPRVVVSDLQL*IFALGP Trigger: CGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCT...AACAACCACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCCCTTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
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| CDS-3UTR GCA 90 bp | CTAGCACGAAAGGGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGTTGGGCAGTCCAGGCTaGAGTCTCTGTCTTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LARKGSWVQSPADHKPRVLGSPG*SLCLCL Trigger: AAGACAAAGACAGAGACTGCAGCCTGGACTGCCCAA...CACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCCCTTTCGTGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
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| CDS-3UTR GCA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTGGACCTGACTGTAGGTaGCGTCATCATTGCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: TLAGWPRHSEVRQVDWILGPDCR*RHHCIL Trigger: CAGAATGCAATGATGACGGCACCTACAGTCAGGTCC...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR GCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCGGCTGCAGCATCATCTaGTTTCCCTGCTCCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSGCSII*FPCSFP Trigger: CGGGAAGGAGCAGGGAAAGCAGATGATGCTGCAGCC...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024660.9 |
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| CDS-3UTR CCA 90 bp | AGGGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGGTTGTTCACAGTGGATCTTTGCACTTaGCCCGCTGGAACTCACATC | + |
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Preference number: 4 (lower is better) Translates to: RGPGFSPQQTINHEWLFTVDLCT*PAGTHI Trigger: GATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCAC...TGTGAACAACCACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
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| CDS-3UTR CCA 90 bp | GCCTTGGGTGAATTCCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCCCTCCAGGGTGTGGCTaGGGTCTGGCTCTGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: ALGEFPQTRCLHKMKLTFPPGCG*GLALTA Trigger: GGCTGTCAGAGCCAGACCCCAGCCACACCCTGGAGG...GAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGGAATTCACCCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCACTCTCCTCCAGGGTGTaGCTGGGGTCTGGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSLSSRV*LGSGSD Trigger: GTCAGAGCCAGACCCCAGCCACACCCTGGAGGAGAG...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR GCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCGCACCAGGACAACCCTaGAGTGGCCTGTTCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSAPGQP*SGLFLY Trigger: GTACAAGAACAGGCCACTGCAGGGTTGTCCTGGTGC...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | TCCATGATCTCTGTAGAAGGCATTTTTCCTTTCCAGTGGACCCTAGCAGGATGGCTTCTGAGGGGAGCTTaGGCAGTCCAGGCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SMISVEGIFPFQWTLAGWLLRGA*AVQAAV Trigger: GACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAG...CCATCCTGCTAGGGTCCACTGGAAAGGAAAAATGCCTTCTACAGAGATCATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCAGCGATCTCCAGCTGTaGATCTTTGCACTTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSSDLQL*IFALGP Trigger: CGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCT...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCGGAATGAACACTTGCTaGAACTCCTTCCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSGMNTC*NSFRAC Trigger: GCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCC...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGACCCATGGTGTGAGTGACATCTCTAGAGAGCAAAACTTTATGAAACCTCCAGGGTGTGGCTaGGGTCTGGCTCTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACVTHGVSDISREQNFMKPPGCG*GLALTA Trigger: GGCTGTCAGAGCCAGACCCCAGCCACACCCTGGAGG...TTTCATAAAGTTTTGCTCTCTAGAGATGTCACTCACACCATGGGTCACACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTGGCTGCAGCATCATCTaGATTCAGAACGGAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLAGWPRHSEVRQVDWILGCSII*IQNGKD Trigger: ATCTTTTCCGTTCTGAATTCAGATGATGCTGCAGCC...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCAATCATCTGCTTTCCCTaGTCCTTCCCGCTGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STEGRGSEVEMHLKPTPPIICFP*SFPLRH Trigger: GTGCCGCAGCGGGAAGGAGCAGGGAAAGCAGATGAT...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024660.9 |
||
| CDS-3UTR GCA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCAGGGCTGAGTCTCCAATaGTGGGGCTGCAGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: STEGRGSEVEMHLKPTPPGLSLQ*WGCSII Trigger: GATGATGCTGCAGCCCCAGCATTGGAGACTCAGCCC...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCGTAGAGACCACCATGTaGACACTCGGGGATCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSVETTM*TLGDHY Trigger: GTAGTGATCCCCGAGTGTGCACATGGTGGTCTCTAC...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGGTGAATTCCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCCACCTGGGTGTCTTGTaGGCCACAGCAGTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGEFPQTRCLHKMKLTFHLGVL*ATAVPL Trigger: CAGTGGCACTGCTGTGGCCCACAAGACACCCAGGTG...GAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGGAATTCACCCAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGCACCTGGGTGTCTTGTaGGCCACAGCAGTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPQNEIDILSCLLFSTLGHLGVL*ATAVPL Trigger: CAGTGGCACTGCTGTGGCCCACAAGACACCCAGGTG...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATTTGAACCGGGGCACCTaGGTGTCTTGTGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: THPTSTDLEGQTRTHTLYLNRGT*VSCGPQ Trigger: CTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAA...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCACCACAGCAGTGCCACTaGTGGGTCTTCCATTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STEGRGSEVEMHLKPTPPPQQCH*WVFHLV Trigger: CACCAAATGGAAGACCCATCAGTGGCACTGCTGTGG...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCTTGGGCAGTCCAGGCTaGAGTCTCTGTCTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSLGSPG*SLCLCL Trigger: AAGACAAAGACAGAGACTGCAGCCTGGACTGCCCAA...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCAAACTCCTTCCGGGCCTaGTCCTGGGTATACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSNSFRA*SWVYFL Trigger: GAGGAAGTATACCCAGGAGCAGGCCCGGAAGGAGTT...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGACTTCTGAGGGGAGCTTaGGCAGTCCAGGCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKMKLTFSAACCSALLGLLRGA*AVQAAV Trigger: GACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAG...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGAGTCCGAGGCACAGAGTaGCTTCTGAGGGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHKMKLTFSAACCSALLGVRGTE*LLRGAW Trigger: CCAAGCTCCCCTCAGAAGCCACTCTGTGCCTCGGAC...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGGTGAATTCCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTTCCGGGCCTGCTCCTaGGTATACTTCCTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGEFPQTRCLHKMKLTFFRACS*VYFLSA Trigger: GGCTGAGAGGAAGTATACCCAGGAGCAGGCCCGGAA...GAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGGAATTCACCCAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATTTCCGGGCCTGCTCCTaGGTATACTTCCTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: THPTSTDLEGQTRTHTLYFRACS*VYFLSA Trigger: GGCTGAGAGGAAGTATACCCAGGAGCAGGCCCGGAA...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCAGGAATGAACACTTGCTaGAACTCCTTCCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STEGRGSEVEMHLKPTPPGMNTC*NSFRAC Trigger: GCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCC...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTGATGGGTCTTCCATTTaGTGTAACACACCAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLAGWPRHSEVRQVDWILDGSSI*CNTPTV Trigger: TACTGTTGGTGTGTTACACCAAATGGAAGACCCATC...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGACCCATGGTGTGAGTGACATCTCTAGAGAGCAAAACTTTATGAAATTGAACCGGGGCACCTaGGTGTCTTGTGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ACVTHGVSDISREQNFMKLNRGT*VSCGPQ Trigger: CTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAA...TTTCATAAAGTTTTGCTCTCTAGAGATGTCACTCACACCATGGGTCACACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGCCAGCTGTGGATCTTTaGACTTGGCCCGCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PPQNEIDILSCLLFSTLGPAVDL*TWPAGT Trigger: AGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGG...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGGCACCAGGACAACCCTaGAGTGGCCTGTTCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PPQNEIDILSCLLFSTLGAPGQP*SGLFLY Trigger: GTACAAGAACAGGCCACTGCAGGGTTGTCCTGGTGC...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR GCA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGACTGGCTCTGACAGCCTaGCAGAAGAGGAAGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHKMKLTFSAACCSALLGLALTA*QKRKRG Trigger: ACCCCTCTTCCTCTTCTGGCAGGCTGTCAGAGCCAG...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCTCTCAGCCACACACCTaGACACATCTTTGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSSQPHT*THLCNS Trigger: GGAATTGCAAAGATGTGTCCAGGTGTGTGGCTGAGA...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGACCAGCAGTATCCGGTaGATGGATGGCATTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSNPMPPQNEIDILSCLLTSSIR*MDGIAL Trigger: CAGTGCAATGCCATCCATCCACCGGATACTGCTGGT...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTTCTTCACACACTTTTTaGGCTTGGATTTCTTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLAGWPRHSEVRQVDWILSSHTF*AWISFA Trigger: TGCGAAAGAAATCCAAGCCCAAAAAGTGTGTGAAGA...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCAGGACCTGACTGTAGGTaGCGTCATCATTGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSGPDCR*RHHCIL Trigger: CAGAATGCAATGATGACGGCACCTACAGTCAGGTCC...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR GCA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGCCTGCTCCTTCCCGCTaGGGCACCTTTTCATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PSNPMPPQNEIDILSCLLPAPSR*GTFSFI Trigger: AATAAATGAAAAGGTGCCGCAGCGGGAAGGAGCAGG...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATGTAGAGACCACCATGTaGACACTCGGGGATCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: THPTSTDLEGQTRTHTLYVETTM*TLGDHY Trigger: GTAGTGATCCCCGAGTGTGCACATGGTGGTCTCTAC...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS-3UTR CCA 90 bp | GCCTGTGTGACCCATGGTGTGAGTGACATCTCTAGAGAGCAAAACTTTATGAAACTGAGTCTCCAATGCTaGGGCTGCAGCATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACVTHGVSDISREQNFMKLSLQC*GCSIIC Trigger: GCAGATGATGCTGCAGCCCCAGCATTGGAGACTCAG...TTTCATAAAGTTTTGCTCTCTAGAGATGTCACTCACACCATGGGTCACACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024660.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCATGGATGGCATTGCACTaGCTTGTAGAGACCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSWMALH*LVETTM Trigger: CATGGTGGTCTCTACAAGCCAGTGCAATGCCATCCA...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTGGATGGCATTGCACTaGCTTGTAGAGACCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSNPMPPQNEIDILSCLLWMALH*LVETTM Trigger: CATGGTGGTCTCTACAAGCCAGTGCAATGCCATCCA...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGATCTCTGTAGAAGGCATTTTTCCTTTCCAGTGGACCCTAGCAGGATGGGAAACTCGTGCTTTTTaGCACCAGGACAACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMISVEGIFPFQWTLAGWETRAF*HQDNPA Trigger: TGCAGGGTTGTCCTGGTGCCAAAAAGCACGAGTTTC...CCATCCTGCTAGGGTCCACTGGAAAGGAAAAATGCCTTCTACAGAGATCATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCAGAAACTCGTGCTTTTTaGCACCAGGACAACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: STEGRGSEVEMHLKPTPPETRAF*HQDNPA Trigger: TGCAGGGTTGTCCTGGTGCCAAAAAGCACGAGTTTC...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATTTGGGCAGTCCAGGCTaGAGTCTCTGTCTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: THPTSTDLEGQTRTHTLYLGSPG*SLCLCL Trigger: AAGACAAAGACAGAGACTGCAGCCTGGACTGCCCAA...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCGGGCTGAGTCTCCAATaGTGGGGCTGCAGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: TMNNFPYKPQSERIAPALGLSLQ*WGCSII Trigger: GATGATGCTGCAGCCCCAGCATTGGAGACTCAGCCC...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCATTGTCATTCTTGGGCTaGTTGGCTTCCTCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSLSFLG*LASSRA Trigger: AGCTCTTGAGGAAGCCAAGCAGCCCAAGAATGACAA...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGAGTGGATCTTTGCACTTaGCCCGCTGGAACTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LHKMKLTFSAACCSALLGVDLCT*PAGTHI Trigger: GATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCAC...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCATCTCAGCCACACACCTaGACACATCTTTGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSSQPHT*THLCNS Trigger: GGAATTGCAAAGATGTGTCCAGGTGTGTGGCTGAGA...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGCATTCTTGGGCTGCTTaGCTTCCTCAAGAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PPQNEIDILSCLLFSTLGHSWAA*LPQELT Trigger: AGTCAGCTCTTGAGGAAGCCAAGCAGCCCAAGAATG...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCACATTGCATTCTGGAATaGACACTTGCTGGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STEGRGSEVEMHLKPTPPHCILE*TLAGTP Trigger: AGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATG...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAACCACAGCAGTGCCACTaGTGGGTCTTCCATTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLQTYIERLGTMNNFPYKPQQCH*WVFHLV Trigger: CACCAAATGGAAGACCCATCAGTGGCACTGCTGTGG...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAATTGCTCTTTGGTGAGGGAAAATTCCCACATGTCTAGGAACTGTCTTTCATCTCCTTGGGGCTaGGTCTCCAATGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFNCSLVRENSHMSRNCLSSPWG*VSNAGA Trigger: AGCCCCAGCATTGGAGACTCAGCCCCAAGGAGATGA...AAGACAGTTCCTAGACATGTGGGAATTTTCCCTCACCAAAGAGCAATTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGACCCATGGTGTGAGTGACATCTCTAGAGAGCAAAACTTTATGAAACATTCTTGGGCTGCTTaGCTTCCTCAAGAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ACVTHGVSDISREQNFMKHSWAA*LPQELT Trigger: AGTCAGCTCTTGAGGAAGCCAAGCAGCCCAAGAATG...TTTCATAAAGTTTTGCTCTCTAGAGATGTCACTCACACCATGGGTCACACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCACTACATTGTCATTCTTaGGCTGCTTGGCTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSLHCHS*AAWLPQ Trigger: TTGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAG...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAATTTCAGCATTTCCTCTaGGGGTGTGGCGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLQTYIERLGTMNNFPYKFQHFL*GCGASW Trigger: CCAGGAAGCGCCACACCCCCAGAGGAAATGCTGAAA...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCTTTCAGCATTTCCTCTaGGGGTGTGGCGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TMNNFPYKPQSERIAPALFQHFL*GCGASW Trigger: CCAGGAAGCGCCACACCCCCAGAGGAAATGCTGAAA...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTGGGTGAATTCCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCCATTGCATTCTGGAATaGACACTTGCTGGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGEFPQTRCLHKMKLTFHCILE*TLAGTP Trigger: AGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATG...GAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGGAATTCACCCAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAATTGCTCTTTGGTGAGGGAAAATTCCCACATGTCTAGGAACTGTCTTAACTCCTTCCGGGCCTaGTCCTGGGTATACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFNCSLVRENSHMSRNCLNSFRA*SWVYFL Trigger: GAGGAAGTATACCCAGGAGCAGGCCCGGAAGGAGTT...AAGACAGTTCCTAGACATGTGGGAATTTTCCCTCACCAAAGAGCAATTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGAGAACGGAAAAGATTTaGAAGGAGACTGCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSNPMPPQNEIDILSCLLRTEKI*KETAFP Trigger: AGGGAAAGCAGTCTCCTTGCAAATCTTTTCCGTTCT...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAAGTGGATCTTTGCACTTaGCCCGCTGGAACTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: HLQTYIERLGTMNNFPYKVDLCT*PAGTHI Trigger: GATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCAC...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCATACACCCAATCTAGTTCAGTCTCTCACAGTATGGTCATCCAGTTCAGATGGGTCTTCCATTTaGTGTAACACACCAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASHTPNLVQSLTVWSSSSDGSSI*CNTPTV Trigger: TACTGTTGGTGTGTTACACCAAATGGAAGACCCATC...TGAACTGGATGACCATACTGTGAGAGACTGAACTAGATTGGGTGTATGGCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATCTACATTGTCATTCTTaGGCTGCTTGGCTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: THPTSTDLEGQTRTHTLYLHCHS*AAWLPQ Trigger: TTGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAG...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCCATGAACCATGTCTGTaGAGAGCGCATCCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TMNNFPYKPQSERIAPALHEPCL*RAHPGH Trigger: GTGTCCTGGATGCGCTCTCCACAGACATGGTTCATG...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| 3UTR CAA 72 bp | GAATTCCCTCAAACCCGATGCCTCCACAAAATGAAATaGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFPQTRCLHKMK*TFSAACCSALL Trigger: CAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGGAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAACCTGCTCCTTCCCGCTaGGGCACCTTTTCATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: HLQTYIERLGTMNNFPYKPAPSR*GTFSFI Trigger: AATAAATGAAAAGGTGCCGCAGCGGGAAGGAGCAGG...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAATTGCTCTTTGGTGAGGGAAAATTCCCACATGTCTAGGAACTGTCTTCATGAACCATGTCTGTaGAGAGCGCATCCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VFNCSLVRENSHMSRNCLHEPCL*RAHPGH Trigger: GTGTCCTGGATGCGCTCTCCACAGACATGGTTCATG...AAGACAGTTCCTAGACATGTGGGAATTTTCCCTCACCAAAGAGCAATTAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGATCACAGGAGGATGCTaGATTTTTATTGGTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSNPMPPQNEIDILSCLLITGGC*IFIGLV Trigger: AACAAGACCAATAAAAATTCAGCATCCTCCTGTGAT...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR GCA 90 bp | ACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAACCACAATCTTTGTCATTCTTGGGCTaGTTGGCTTCCTCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYIERLGTMNNFPYKPQSLSFLG*LASSRA Trigger: AGCTCTTGAGGAAGCCAAGCAGCCCAAGAATGACAA...AGATTGTGGTTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGAGTCATCATTGCATTCTaGAATGAACACTTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHKMKLTFSAACCSALLGVIIAF*NEHLLE Trigger: TTCCAGCAAGTGTTCATTCCAGAATGCAATGATGAC...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | ACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAACCACAATCTTCTTCACACACTTTTTaGGCTTGGATTTCTTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TYIERLGTMNNFPYKPQSSSHTF*AWISFA Trigger: TGCGAAAGAAATCCAAGCCCAAAAAGTGTGTGAAGA...AGATTGTGGTTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR TCA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAAATCACAGGAGGATGCTaGATTTTTATTGGTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLQTYIERLGTMNNFPYKITGGC*IFIGLV Trigger: AACAAGACCAATAAAAATTCAGCATCCTCCTGTGAT...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAATTGCTCTTTGGTGAGGGAAAATTCCCACATGTCTAGGAACTGTCTTGTCATCATTGCATTCTaGAATGAACACTTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFNCSLVRENSHMSRNCLVIIAF*NEHLLE Trigger: TTCCAGCAAGTGTTCATTCCAGAATGCAATGATGAC...AAGACAGTTCCTAGACATGTGGGAATTTTCCCTCACCAAAGAGCAATTAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | GAACTCACATCGGGACAGGAAGGTCCTCCCGTCCGAGGCACAGAGTaGCTTCTGAGGGGAGCTTGGGCAGTCCAGGCTGCAGTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ELTSGQEGPPVRGTE*LLRGAWAVQAAVSV Trigger: GACAGAGACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAGCCACTCTGTGCCTCGGACGGGAGGACCTTCCTGTCCCGATGTGAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS TCA 90 bp | CATCGGGACAGGAAGGTCCTCCCGTCCGAGGCACAGAGTGGCTTCTaGGGGGAGCTTGGGCAGTCCAGGCTGCAGTCTCTGTCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRDRKVLPSEAQSGF*GELGQSRLQSLSLS Trigger: AGACAAAGACAGAGACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAGCCACTCTGTGCCTCGGACGGGAGGACCTTCCTGTCCCGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | TGCAATTCCCACGGTGAGCGATCTCCAGCTGTGGATCTTTGCACTTaGCCCGCTGGAACTCACATCGGGACAGGAAGGTCCTCCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CNSHGERSPAVDLCT*PAGTHIGTGRSSRP Trigger: CGGACGGGAGGACCTTCCTGTCCCGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS TCA 90 bp | CCCTGCAGTGGCCTGTTCTTGTACAGGTCCCGGGCCTTCGCTGGGTaGGCTCGGGCTGTGTTGTCACACTTAGGTTGCTCATACCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCSGLFLYRSRAFAG*ARAVLSHLGCSYLV Trigger: CACAAGGTATGAGCAACCTAAGTGTGACAACACAGCCCGAGCTCACCCAGCGAAGGCCCGGGACCTGTACAAGAACAGGCCACTGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS TCA 90 bp | GACTGCTTTCCCTGCTCCTTCCCGCTGCGGCACCTTTTCATTTATTaGACCGGGGCACCTGGGTGTCTTGTGGGCCACAGCAGTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DCFPCSFPLRHLFIY*TGAPGCLVGHSSAT Trigger: AGTGGCACTGCTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAATAAATGAAAAGGTGCCGCAGCGGGAAGGAGCAGGGAAAGCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | GAAGGTCCTCCCGTCCGAGGCACAGAGTGGCTTCTGAGGGGAGCTTaGGCAGTCCAGGCTGCAGTCTCTGTCTTTGTCTTGATCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGPPVRGTEWLLRGA*AVQAAVSVFVLIDS Trigger: AGAGTCGATCAAGACAAAGACAGAGACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAGCCACTCTGTGCCTCGGACGGGAGGACCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS TCA 90 bp | ATCTGCTTTCCCTGCTCCTTCCCGCTGCGGCACCTTTTCATTTATTaGACCGGGGCACCTGGGTGTCTTGTGGGCCACAGCAGTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ICFPCSFPLRHLFIY*TGAPGCLVGHSSAT Trigger: AGTGGCACTGCTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAATAAATGAAAAGGTGCCGCAGCGGGAAGGAGCAGGGAAAGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024660.9 |
||
| CDS CCA 90 bp | CCTTCCGGGCCTGCTCCTGGGTATACTTCCTCTCAGCCACACACCTaGACACATCTTTGCAATTCCCACGGTGAGCGATCTCCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSGPAPGYTSSQPHT*THLCNSHGERSPAV Trigger: CACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGATGTGTCCAGGTGTGTGGCTGAGAGGAAGTATACCCAGGAGCAGGCCCGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | ACAACCCTGCAGTGGCCTGTTCTTGTACAGGTCCCGGGCCTTCGCTaGGTGAGCTCGGGCTGTGTTGTCACACTTAGGTTGCTCATACCT | + |
|
Preference number: 5 (lower is better) Translates to: TTLQWPVLVQVPGLR*VSSGCVVTLRLLIP Trigger: AGGTATGAGCAACCTAAGTGTGACAACACAGCCCGAGCTCACCCAGCGAAGGCCCGGGACCTGTACAAGAACAGGCCACTGCAGGGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS TCA 90 bp | GGCTCTGACAGCCTGCCAGAAGAGGAAGAGGGGTCAGAGACGGCATaGACCATGTCTGTGGAGAGCGCATCCAGGACACTTGTCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GSDSLPEEEEGSETA*TMSVESASRTLVRN Trigger: GTTTCTGACAAGTGTCCTGGATGCGCTCTCCACAGACATGGTTCATGCCGTCTCTGACCCCTCTTCCTCTTCTGGCAGGCTGTCAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 90 bp | CATCTTTGCAATTCCCACGGTGAGCGATCTCCAGCTGTGGATCTTTaGACTTGGCCCGCTGGAACTCACATCGGGACAGGAAGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLCNSHGERSPAVDL*TWPAGTHIGTGRSS Trigger: GGAGGACCTTCCTGTCCCGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 90 bp | ACACTTTGCAATTCCCACGGTGAGCGATCTCCAGCTGTGGATCTTTaGACTTGGCCCGCTGGAACTCACATCGGGACAGGAAGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLCNSHGERSPAVDL*TWPAGTHIGTGRSS Trigger: GGAGGACCTTCCTGTCCCGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGGTTGTTCACATCTCCAGCTGTGGATCTTaGCACTTGGCCCGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GSWVQSPADHKPRVVVHISSCGS*HLARWN Trigger: GTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGA...GATGTGAACAACCACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
||
| CDS CCA 90 bp | CCTGGACACATCTTTGCAATTCCCACGGTGAGCGATCTCCAGCTGTaGATCTTTGCACTTGGCCCGCTGGAACTCACATCGGGACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGHIFAIPTVSDLQL*IFALGPLELTSGQE Trigger: TTCCTGTCCCGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGATGTGTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | GCTGTGACACTGGACCTGACTGTAGGTGCCGTCATCATTGCATTCTaGAATGAACACTTGCTGGAACTCCTTCCGGGCCTGCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVTLDLTVGAVIIAF*NEHLLELLPGLLLG Trigger: ACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGATGACGGCACCTACAGTCAGGTCCAGTGTCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | GTCCCAGTACACTTTGCAATTCCCACGGTGAGCGATCTCCAGCTGTaGATCTTTGCACTTGGCCCGCTGGAACTCACATCGGGACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VPVHFAIPTVSDLQL*IFALGPLELTSGQE Trigger: TTCCTGTCCCGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGTGTACTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTTTCTGGAATGAACACTaGCTGGAACTCCTTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLAGWPRHSEVRQVDWILFWNEH*LELLPG Trigger: GCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAA...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGGGGCACCTGGGTGTCTaGTGGGCCACAGCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSNPMPPQNEIDILSCLLGHLGV*WATAVP Trigger: TGGCACTGCTGTGGCCCACAAGACACCCAGGTGCCC...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGGTCCTGGGTTCAGTCCCCAGCAGACCATAAACCACGAGTGGTTGTTCACTGTGGATCTTTGCACTaGGCCCGCTGGAACTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: KGSWVQSPADHKPRVVVHCGSLH*ARWNSH Trigger: ATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACA...GTGAACAACCACTCGTGGTTTATGGTCTGCTGGGGACTGAACCCAGGACCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTAGCAGGATGGCCCAGGCACTCAGAAGTGAGGCAGGTAGACTGGATCCTTATCTTCTTCATCTCCTaGGGGCTGAGTCTCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: TLAGWPRHSEVRQVDWILIFFIS*GLSLQC Trigger: GCATTGGAGACTCAGCCCCAAGGAGATGAAGAAGAT...AAGGATCCAGTCTACCTGCCTCACTTCTGAGTGCCTGGGCCATCCTGCTAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS TCA 90 bp | GACACTGGACCTGACTGTAGGTGCCGTCATCATTGCATTCTGGAATaGACACTTGCTGGAACTCCTTCCGGGCCTGCTCCTGGGTATACT | + |
|
Preference number: 5 (lower is better) Translates to: DTGPDCRCRHHCILE*TLAGTPSGPAPGYT Trigger: AGTATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGATGACGGCACCTACAGTCAGGTCCAGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 90 bp | GCTCCTGGGTATACTTCCTCTCAGCCACACACCTGGACACATCTTTaGAATTCCCACGGTGAGCGATCTCCAGCTGTGGATCTTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: APGYTSSQPHTWTHL*NSHGERSPAVDLCT Trigger: AGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGATGTGTCCAGGTGTGTGGCTGAGAGGAAGTATACCCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 90 bp | TCATTGCATTCTGGAATGAACACTTGCTGGAACTCCTTCCGGGCCTaGTCCTGGGTATACTTCCTCTCAGCCACACACCTGGACACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLHSGMNTCWNSFRA*SWVYFLSATHLDTS Trigger: AGATGTGTCCAGGTGTGTGGCTGAGAGGAAGTATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 90 bp | AATGCTGGGGCTGCAGCATCATCTGAATTCAGAACGGAAAAGATTTaGAAGGAGACTGCTTTCCCTGCTCCTTCCCGCTGCGGCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NAGAAASSEFRTEKI*KETAFPAPSRCGTF Trigger: AAAGGTGCCGCAGCGGGAAGGAGCAGGGAAAGCAGTCTCCTTGCAAATCTTTTCCGTTCTGAATTCAGATGATGCTGCAGCCCCAGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | CATTCTGGAATGAACACTTGCTGGAACTCCTTCCGGGCCTGCTCCTaGGTATACTTCCTCTCAGCCACACACCTGGACACATCTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSGMNTCWNSFRACS*VYFLSATHLDTSLQ Trigger: TTGCAAAGATGTGTCCAGGTGTGTGGCTGAGAGGAAGTATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | CATGTGCACACTCGGGGATCACTACATTGTCATTCTTGGGCTGCTTaGCTTCCTCAAGAGCTGACTGATGCTCCTGATCACAGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HVHTRGSLHCHSWAA*LPQELTDAPDHRRM Trigger: CATCCTCCTGTGATCAGGAGCATCAGTCAGCTCTTGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAGTGATCCCCGAGTGTGCACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 90 bp | AGAGACCACCATGTGCACACTCGGGGATCACTACATTGTCATTCTTaGGCTGCTTGGCTTCCTCAAGAGCTGACTGATGCTCCTGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: RDHHVHTRGSLHCHS*AAWLPQELTDAPDH Trigger: GTGATCAGGAGCATCAGTCAGCTCTTGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAGTGATCCCCGAGTGTGCACATGGTGGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCTAACAGCATAGTCTCAAGCAGGGGCTACTGGAAGTTAAGGCTATGCCTGAGCAGAAACTCGTGCTTTTaGGCACCAGGACAACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PNSIVSSRGYWKLRLCLSRNSCF*APGQPC Trigger: GCAGGGTTGTCCTGGTGCCAAAAAGCACGAGTTTCT...GCTCAGGCATAGCCTTAACTTCCAGTAGCCCCTGCTTGAGACTATGCTGTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTGGCGCTTCCTGGTGTaGGCTTTACCCTCCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSNPMPPQNEIDILSCLLWRFLV*ALPSSL Trigger: CAGAGAGGAGGGTAAAGCCAACACCAGGAAGCGCCA...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCATGGCGCTTCCTGGTGTaGGCTTTACCCTCCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: STEGRGSEVEMHLKPTPPWRFLV*ALPSSL Trigger: CAGAGAGGAGGGTAAAGCCAACACCAGGAAGCGCCA...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATTCCAGCTGTGGATCTTaGCACTTGGCCCGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: THPTSTDLEGQTRTHTLYSSCGS*HLARWN Trigger: GTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGA...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGTCCAGCTGTGGATCTTaGCACTTGGCCCGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPQNEIDILSCLLFSTLGSSCGS*HLARWN Trigger: GTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGA...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | ACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAACCACAATCTGGGCACCTGGGTGTCTaGTGGGCCACAGCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TYIERLGTMNNFPYKPQSGHLGV*WATAVP Trigger: TGGCACTGCTGTGGCCCACAAGACACCCAGGTGCCC...AGATTGTGGTTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGGGTGGATGGATGGCATaGCACTGGCTTGTAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PSNPMPPQNEIDILSCLLGGWMA*HWLVET Trigger: GGTCTCTACAAGCCAGTGCAATGCCATCCATCCACC...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTGTGGATCTTTGCACTaGGCCCGCTGGAACTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PSNPMPPQNEIDILSCLLCGSLH*ARWNSH Trigger: ATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACA...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCATTCTGGAATGAACACTaGCTGGAACTCCTTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: STEGRGSEVEMHLKPTPPFWNEH*LELLPG Trigger: GCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAA...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGGGTGGATGGATGGCATaGCACTGGCTTGTAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PPQNEIDILSCLLFSTLGGGWMA*HWLVET Trigger: GGTCTCTACAAGCCAGTGCAATGCCATCCATCCACC...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGATCTTCTTCATCTCCTaGGGGCTGAGTCTCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PPQNEIDILSCLLFSTLGIFFIS*GLSLQC Trigger: GCATTGGAGACTCAGCCCCAAGGAGATGAAGAAGAT...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAACCCGATGCCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGACTACATTGTCATTCTaGGGCTGCTTGGCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSNPMPPQNEIDILSCLLTTLSF*GCLASS Trigger: TGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAGT...CAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGGCATCGGGTTTGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATTCGGGGATCACTACATaGTCATTCTTGGGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: THPTSTDLEGQTRTHTLYSGITT*SFLGCL Trigger: CAAGCAGCCCAAGAATGACAATGTAGTGATCCCCGA...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGTCGGGGATCACTACATaGTCATTCTTGGGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPQNEIDILSCLLFSTLGSGITT*SFLGCL Trigger: CAAGCAGCCCAAGAATGACAATGTAGTGATCCCCGA...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGTGTGACCCATGGTGTGAGTGACATCTCTAGAGAGCAAAACTTTATGAAAGCGCATCCAGGACACTaGTCAGAAACTCGTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ACVTHGVSDISREQNFMKAHPGH*SETRAF Trigger: AAAAGCACGAGTTTCTGACAAGTGTCCTGGATGCGC...TTTCATAAAGTTTTGCTCTCTAGAGATGTCACTCACACCATGGGTCACACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACCCCACCAGCACAGATCTTGAAGGTCAAACAAGGACACATACATTGTATCAGAACGGAAAAGATTaGCAAGGAGACTGCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: THPTSTDLEGQTRTHTLYQNGKD*QGDCFP Trigger: GGGAAAGCAGTCTCCTTGCAAATCTTTTCCGTTCTG...ATACAATGTATGTGTCCTTGTTTGACCTTCAAGATCTGTGCTGGTGGGGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGTGTGACCCATGGTGTGAGTGACATCTCTAGAGAGCAAAACTTTATGAAAACTACATTGTCATTCTaGGGCTGCTTGGCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ACVTHGVSDISREQNFMKTTLSF*GCLASS Trigger: TGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAGT...TTTCATAAAGTTTTGCTCTCTAGAGATGTCACTCACACCATGGGTCACACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | ACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAACCACAATCTAGAAACTCGTGCTTTTaGGCACCAGGACAACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TYIERLGTMNNFPYKPQSRNSCF*APGQPC Trigger: GCAGGGTTGTCCTGGTGCCAAAAAGCACGAGTTTCT...AGATTGTGGTTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGACACACTTTTTGGGCTaGGATTTCTTTCGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPQNEIDILSCLLFSTLGTHFLG*DFFRRN Trigger: GTTCCTGCGAAAGAAATCCAAGCCCAAAAAGTGTGT...CCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CATCTACAGACATACATTGAGAGGCTGGGGACCATGAACAATTTCCCATATAAAGCGCATCCAGGACACTaGTCAGAAACTCGTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLQTYIERLGTMNNFPYKAHPGH*SETRAF Trigger: AAAAGCACGAGTTTCTGACAAGTGTCCTGGATGCGC...TTTATATGGGAAATTGTTCATGGTCCCCAGCCTCTCAATGTATGTCTGTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | TCCACAGAGGGACGAGGAAGTGAAGTTGAAATGCATTTAAAACCCACCCCACCAGAATTTTTATTGGTCTaGTTCTGCCGACTCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: STEGRGSEVEMHLKPTPPEFLLV*FCRLLT Trigger: AGTTAAGAGTCGGCAGAACAAGACCAATAAAAATTC...TGGTGGGGTGGGTTTTAAATGCATTTCAACTTCACTTCCTCGTCCCTCTGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | ACCATGAACAATTTCCCATATAAACCACAATCTGAAAGAATTGCCCCAGCTCTCACACACTTTTTGGGCTaGGATTTCTTTCGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TMNNFPYKPQSERIAPALTHFLG*DFFRRN Trigger: GTTCCTGCGAAAGAAATCCAAGCCCAAAAAGTGTGT...GAGAGCTGGGGCAATTCTTTCAGATTGTGGTTTATATGGGAAATTGTTCATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS-3UTR CAA 90 bp | CTCCACAAAATGAAATTGACATTCTCAGCTGCCTGTTGTTCAGCACTCTTGGGAGAATTTTTATTGGTCTaGTTCTGCCGACTCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: LHKMKLTFSAACCSALLGEFLLV*FCRLLT Trigger: AGTTAAGAGTCGGCAGAACAAGACCAATAAAAATTC...TCCCAAGAGTGCTGAACAACAGGCAGCTGAGAATGTCAATTTCATTTTGTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS TCA 72 bp | AGGAAGGTCCTCCCGTCCGAGGCACAGAGTGGCTTCTaGGGGGAGCTTGGGCAGTCCAGGCTGCAGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RKVLPSEAQSGF*GELGQSRLQSL Trigger: CAGAGACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAGCCACTCTGTGCCTCGGACGGGAGGACCTTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS TCA 72 bp | CCCTGCTCCTTCCCGCTGCGGCACCTTTTCATTTATTaGACCGGGGCACCTGGGTGTCTTGTGGGCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PCSFPLRHLFIY*TGAPGCLVGHS Trigger: GCTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAATAAATGAAAAGGTGCCGCAGCGGGAAGGAGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | CCCGTCCGAGGCACAGAGTGGCTTCTGAGGGGAGCTTaGGCAGTCCAGGCTGCAGTCTCTGTCTTTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PVRGTEWLLRGA*AVQAAVSVFVL Trigger: CAAGACAAAGACAGAGACTGCAGCCTGGACTGCCCAAGCTCCCCTCAGAAGCCACTCTGTGCCTCGGACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | GCGATCTCCAGCTGTGGATCTTTGCACTTGGCCCGCTaGAACTCACATCGGGACAGGAAGGTCCTCCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AISSCGSLHLAR*NSHRDRKVLPS Trigger: GGACGGGAGGACCTTCCTGTCCCGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS TCA 72 bp | GGCCTGTTCTTGTACAGGTCCCGGGCCTTCGCTGGGTaGGCTCGGGCTGTGTTGTCACACTTAGGTTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLFLYRSRAFAG*ARAVLSHLGCS Trigger: TGAGCAACCTAAGTGTGACAACACAGCCCGAGCTCACCCAGCGAAGGCCCGGGACCTGTACAAGAACAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | CACGGTGAGCGATCTCCAGCTGTGGATCTTTGCACTTaGCCCGCTGGAACTCACATCGGGACAGGAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HGERSPAVDLCT*PAGTHIGTGRS Trigger: GGACCTTCCTGTCCCGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024660.9 ENSMUST00000232923.2 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | CAGTGGCCTGTTCTTGTACAGGTCCCGGGCCTTCGCTaGGTGAGCTCGGGCTGTGTTGTCACACTTAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QWPVLVQVPGLR*VSSGCVVTLRL Trigger: CAACCTAAGTGTGACAACACAGCCCGAGCTCACCCAGCGAAGGCCCGGGACCTGTACAAGAACAGGCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CAA 72 bp | TCCCTGCTCCTTCCCGCTGCGGCACCTTTTCATTTATaGAACCGGGGCACCTGGGTGTCTTGTGGGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLLPAAAPFHL*NRGTWVSCGPQ Trigger: CTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAATAAATGAAAAGGTGCCGCAGCGGGAAGGAGCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | AGTACCAATGTACAACCCTCTCCTCCAGGGTGTGGCTaGGGTCTGGCTCTGACAGCCTGCCAGAAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STNVQPSPPGCG*GLALTACQKRK Trigger: CTTCCTCTTCTGGCAGGCTGTCAGAGCCAGACCCCAGCCACACCCTGGAGGAGAGGGTTGTACATTGGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CAA 72 bp | TCAGCATTTCCTCTGGGGGTGTGGCGCTTCCTGGTGTaGGCTTTACCCTCCTCTCTGGTGACACCCAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SAFPLGVWRFLV*ALPSSLVTPKQ Trigger: CTGCTTGGGTGTCACCAGAGAGGAGGGTAAAGCCAACACCAGGAAGCGCCACACCCCCAGAGGAAATGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CAA 90 bp | GAAGAACTTTCAGCATTTCCTCTGGGGGTGTGGCGCTTCCTGGTGTaGGCTTTACCCTCCTCTCTGGTGACACCCAAGCAGCCCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: EELSAFPLGVWRFLV*ALPSSLVTPKQPMS Trigger: GCTCATGGGCTGCTTGGGTGTCACCAGAGAGGAGGGTAAAGCCAACACCAGGAAGCGCCACACCCCCAGAGGAAATGCTGAAAGTTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 72 bp | GTCAGAAACTCGTGCTTTTTGGCACCAGGACAACCCTaGAGTGGCCTGTTCTTGTACAGGTCCCGGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRNSCFLAPGQP*SGLFLYRSRAF Trigger: GAAGGCCCGGGACCTGTACAAGAACAGGCCACTGCAGGGTTGTCCTGGTGCCAAAAAGCACGAGTTTCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CAA 90 bp | CGCTGCGGCACCTTTTCATTTATTGAACCGGGGCACCTGGGTGTCTaGTGGGCCACAGCAGTGCCACTGATGGGTCTTCCATTTGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RCGTFSFIEPGHLGV*WATAVPLMGLPFGV Trigger: TACACCAAATGGAAGACCCATCAGTGGCACTGCTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAATAAATGAAAAGGTGCCGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 72 bp | TCTGGAATGAACACTTGCTGGAACTCCTTCCGGGCCTaGTCCTGGGTATACTTCCTCTCAGCCACACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGMNTCWNSFRA*SWVYFLSATHL Trigger: CAGGTGTGTGGCTGAGAGGAAGTATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS GCA 72 bp | TCCTCTCTGGTGACACCCAAGCAGCCCATGAGCTCCTaGACGGTGATGGACTTGTCATTGTTCATGTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLVTPKQPMSS*TVMDLSLFMSQ Trigger: CTGCGACATGAACAATGACAAGTCCATCACCGTGCAGGAGCTCATGGGCTGCTTGGGTGTCACCAGAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | ATGAACACTTGCTGGAACTCCTTCCGGGCCTGCTCCTaGGTATACTTCCTCTCAGCCACACACCTGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: MNTCWNSFRACS*VYFLSATHLDT Trigger: TGTGTCCAGGTGTGTGGCTGAGAGGAAGTATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | CACTTTGCAATTCCCACGGTGAGCGATCTCCAGCTGTaGATCTTTGCACTTGGCCCGCTGGAACTCACATCG | + |
|
Preference number: 6 (lower is better) Translates to: HFAIPTVSDLQL*IFALGPLELTS Trigger: CGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232923.2 |
||
| CDS TCA 72 bp | CCTGACTGTAGGTGCCGTCATCATTGCATTCTGGAATaGACACTTGCTGGAACTCCTTCCGGGCCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PDCRCRHHCILE*TLAGTPSGPAP Trigger: AGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGATGACGGCACCTACAGTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | ATCTTTGCAATTCCCACGGTGAGCGATCTCCAGCTGTaGATCTTTGCACTTGGCCCGCTGGAACTCACATCG | + |
|
Preference number: 6 (lower is better) Translates to: IFAIPTVSDLQL*IFALGPLELTS Trigger: CGATGTGAGTTCCAGCGGGCCAAGTGCAAAGATCCACAGCTGGAGATCGCTCACCGTGGGAATTGCAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | CCTGCTCCTGGGTATACTTCCTCTCAGCCACACACCTaGACACATCTTTGCAATTCCCACGGTGAGCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PAPGYTSSQPHT*THLCNSHGERS Trigger: AGATCGCTCACCGTGGGAATTGCAAAGATGTGTCCAGGTGTGTGGCTGAGAGGAAGTATACCCAGGAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
||
| CDS CCA 72 bp | CTGGACCTGACTGTAGGTGCCGTCATCATTGCATTCTaGAATGAACACTTGCTGGAACTCCTTCCGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LDLTVGAVIIAF*NEHLLELLPGL Trigger: CAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGATGACGGCACCTACAGTCAGGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CAA 72 bp | ACCTTTTCATTTATTGAACCGGGGCACCTGGGTGTCTaGTGGGCCACAGCAGTGCCACTGATGGGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TFSFIEPGHLGV*WATAVPLMGLP Trigger: TGGAAGACCCATCAGTGGCACTGCTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAATAAATGAAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CAA 90 bp | GACCTGACTGTAGGTGCCGTCATCATTGCATTCTGGAATGAACACTaGCTGGAACTCCTTCCGGGCCTGCTCCTGGGTATACTTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: DLTVGAVIIAFWNEH*LELLPGLLLGILPL Trigger: GAGAGGAAGTATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGATGACGGCACCTACAGTCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CCA 72 bp | GTGCCGTCATCATTGCATTCTGGAATGAACACTTGCTaGAACTCCTTCCGGGCCTGCTCCTGGGTATACTTC | + |
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Preference number: 6 (lower is better) Translates to: VPSSLHSGMNTC*NSFRACSWVYF Trigger: GAAGTATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGATGACGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CAA 72 bp | GTAGGTGCCGTCATCATTGCATTCTGGAATGAACACTaGCTGGAACTCCTTCCGGGCCTGCTCCTGGGTATA | + |
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Preference number: 6 (lower is better) Translates to: VGAVIIAFWNEH*LELLPGLLLGI Trigger: TATACCCAGGAGCAGGCCCGGAAGGAGTTCCAGCAAGTGTTCATTCCAGAATGCAATGATGACGGCACCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CAA 72 bp | CCCAAGCAGCCCATGAGCTCCTGCACGGTGATGGACTaGTCATTGTTCATGTCGCAGTACTCCACAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: PKQPMSSCTVMD*SLFMSQYSTNF Trigger: GAAGTTTGTGGAGTACTGCGACATGAACAATGACAAGTCCATCACCGTGCAGGAGCTCATGGGCTGCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CAA 90 bp | CTGGTGACACCCAAGCAGCCCATGAGCTCCTGCACGGTGATGGACTaGTCATTGTTCATGTCGCAGTACTCCACAAACTTCTTCACACAC | + |
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Preference number: 6 (lower is better) Translates to: LVTPKQPMSSCTVMD*SLFMSQYSTNFFTH Trigger: GTGTGTGAAGAAGTTTGTGGAGTACTGCGACATGAACAATGACAAGTCCATCACCGTGCAGGAGCTCATGGGCTGCTTGGGTGTCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS TCA 72 bp | GGGCTGAGTCTCCAATGCTGGGGCTGCAGCATCATCTaGATTCAGAACGGAAAAGATTTGCAAGGAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: GLSLQCWGCSII*IQNGKDLQGDC Trigger: GCAGTCTCCTTGCAAATCTTTTCCGTTCTGAATTCAGATGATGCTGCAGCCCCAGCATTGGAGACTCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233344.2 |
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| CDS CCA 72 bp | TTTTCATTTATTGAACCGGGGCACCTGGGTGTCTTGTaGGCCACAGCAGTGCCACTGATGGGTCTTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: FSFIEPGHLGVL*ATAVPLMGLPF Trigger: AAATGGAAGACCCATCAGTGGCACTGCTGTGGCCCACAAGACACCCAGGTGCCCCGGTTCAATAAATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CCA 72 bp | ACTCGGGGATCACTACATTGTCATTCTTGGGCTGCTTaGCTTCCTCAAGAGCTGACTGATGCTCCTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: TRGSLHCHSWAA*LPQELTDAPDH Trigger: GTGATCAGGAGCATCAGTCAGCTCTTGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAGTGATCCCCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CCA 72 bp | CATGTGCACACTCGGGGATCACTACATTGTCATTCTTaGGCTGCTTGGCTTCCTCAAGAGCTGACTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: HVHTRGSLHCHS*AAWLPQELTDA Trigger: AGCATCAGTCAGCTCTTGAGGAAGCCAAGCAGCCCAAGAATGACAATGTAGTGATCCCCGAGTGTGCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS TCA 72 bp | ACTCTTAACTTGCTCGGTCCAGAGTGTAGGGTAGCGTaGGGCAATATCTTCTTCATCTCCTTGGGGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: TLNLLGPECRVA*GNIFFISLGLS Trigger: ACTCAGCCCCAAGGAGATGAAGAAGATATTGCCTCACGCTACCCTACACTCTGGACCGAGCAAGTTAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CAA 72 bp | CAGCCCATGAGCTCCTGCACGGTGATGGACTTGTCATaGTTCATGTCGCAGTACTCCACAAACTTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: QPMSSCTVMDLS*FMSQYSTNFFT Trigger: TGTGAAGAAGTTTGTGGAGTACTGCGACATGAACAATGACAAGTCCATCACCGTGCAGGAGCTCATGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS GCA 72 bp | TCACAGGAGGATGCTGAATTTTTATTGGTCTTGTTCTaGCGACTCTTAACTTGCTCGGTCCAGAGTGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SQEDAEFLLVLF*RLLTCSVQSVG Trigger: CCCTACACTCTGGACCGAGCAAGTTAAGAGTCGGCAGAACAAGACCAATAAAAATTCAGCATCCTCCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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| CDS CAA 90 bp | TTGGATTTCTTTCGCAGGAACCTCTTAAAGGGTTTGATCTCCTTCTaGCCAATGTCTCCACTAGAGTTCTTATCAAGCAGCTTGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: LDFFRRNLLKGLISF*PMSPLEFLSSSLKY Trigger: GTACTTCAAGCTGCTTGATAAGAACTCTAGTGGAGACATTGGCAAGAAGGAGATCAAACCCTTTAAGAGGTTCCTGCGAAAGAAATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024660.9 ENSMUST00000233344.2 |
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