Pregenerated sensors for SMNDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025024Ensembl transcript IDs: ENSMUST00000025997.7, ENSMUST00000235830.2, ENSMUST00000236245.2, ENSMUST00000236962.2, ENSMUST00000237529.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTTTCGCCTTCCTTCCTTCTTCTACAGGCTTGAGGTTCAGCAATaGCGTCACTTCGGCATTGCCATAAACAGCAAAGGTGATTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LFRLPSFFYRLEVQQ*RHFGIAINSKGDCS Trigger: GCTGCAATCACCTTTGCTGTTTATGGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCGAAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR CCA 90 bp | TTCTTGGAGTACGCCCTGTTGTTGAACTGCTGCCATTTCACCTTCTaGTCCTCTCGCTCCTGCTCCAACTCTTTTATTCTCTGTGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: FLEYALLLNCCHFTF*SSRSCSNSFILCAF Trigger: AAAAGCACAGAGAATAAAAGAGTTGGAGCAGGAGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR TCA 90 bp | CAACATCAGTTCAATGGGCCTGACGTTCAGAAGTCATCTAAGTGCTaGTTTAAGCAGCACTTACCTAGAAAAGTTGCCTTGTTCAACACA | + |
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Preference number: 1 (lower is better) Translates to: QHQFNGPDVQKSSKC*FKQHLPRKVALFNT Trigger: TGTGTTGAACAAGGCAACTTTTCTAGGTAAGTGCTGCTTAAATCAGCACTTAGATGACTTCTGAACGTCAGGCCCATTGAACTGATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCCTTCTTCTACAGGCTTaGGGTTCAGCAATGGCGTCA | + |
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Preference number: 2 (lower is better) Translates to: NLYLGLSGQWPGCKTEALLLLQA*GSAMAS Trigger: TGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAG...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTGACATGGGTTTGTTaGCGCTGTCCTCTTTCGCCT | + |
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Preference number: 2 (lower is better) Translates to: NLYLGLSGQWPGCKTEALLTWVC*RCPLSP Trigger: AGGCGAAAGAGGACAGCGGCAACAAACCCATGTCAA...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTTTGACATGGGTTTGTTaGCGCTGTCCTCTTTCGCCT | + |
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Preference number: 2 (lower is better) Translates to: CPLHFLEKQKYSSLPGLSLTWVC*RCPLSP Trigger: AGGCGAAAGAGGACAGCGGCAACAAACCCATGTCAA...AGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCCAAGTGCAAAGCATCTaGAAATTCCAAATTAGGACT | + |
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Preference number: 2 (lower is better) Translates to: WACLDNGQVVKLKLSLAGQVQSI*KFQIRT Trigger: AGTCCTAATTTGGAATTTTCAGATGCTTTGCACTTG...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCGCCTCCATGTTCCAATaGACTGTTGGAATATGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: NLYLGLSGQWPGCKTEALASMFQ*TVGICQ Trigger: TTGACATATTCCAACAGTTCATTGGAACATGGAGGC...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTTCATAAACAGCAAAGGTaGTTGCAGCGGTGCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: ARYTFWRSKNTPLYLAFLHKQQR*LQRCHF Trigger: AAAATGGCACCGCTGCAATCACCTTTGCTGTTTATG...AAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTTCTTCTACAGGCTTaGGGTTCAGCAATGGCGTCA | + |
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Preference number: 2 (lower is better) Translates to: KLTYTWACLDNGQVVKLKLLLQA*GSAMAS Trigger: TGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAG...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR GCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAACAGCAAAGGTGATTaGAGCGGTGCCATTTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LYLGLSGQWPGCKTEALFNSKGD*SGAIFF Trigger: GAAGAAAATGGCACCGCTGCAATCACCTTTGCTGTT...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACTGTTGTTGAACTGCTaGCATTTCACCTTCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: AVYKLTYTWACLDNGQVVLLLNC*HFTFWS Trigger: GGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTGGCTTGTCTGGACAATaGCCAGGTTGTAAAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: LYLGLSGQWPGCKTEALFGLSGQ*PGCKTE Trigger: TTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCC...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTGCTTCACTTATGCCAACAAATGCTGGCAACTTGATCTCGTTAATAAAACTTGAGGTTCAGCAATaGCGTCACTTCGGCATTGCC | + |
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Preference number: 2 (lower is better) Translates to: CGASLMPTNAGNLISLIKLEVQQ*RHFGIA Trigger: GGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAG...TTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGGCATAAGTGAAGCACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| 3UTR-3UTR TCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTGCCTCCATGTTCCAATaGACTGTTGGAATATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LYLGLSGQWPGCKTEALFASMFQ*TVGICQ Trigger: TTGACATATTCCAACAGTTCATTGGAACATGGAGGC...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR CCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTGCCCGTTACACTTTCTaGAGAAGCAAAAATACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LYLGLSGQWPGCKTEALFARYTF*RSKNTP Trigger: AGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGC...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCCAAGTGCAAAGCATCTaGAAATTCCAAATTAGGACT | + |
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Preference number: 2 (lower is better) Translates to: NLYLGLSGQWPGCKTEALQVQSI*KFQIRT Trigger: AGTCCTAATTTGGAATTTTCAGATGCTTTGCACTTG...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR TCA 90 bp | CTACTCCAACTTTGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACATAAACAGCAAAGGTaGTTGCAGCGGTGCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: LLQLCPLHFLEKQKYSSLHKQQR*LQRCHF Trigger: AAAATGGCACCGCTGCAATCACCTTTGCTGTTTATG...TAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTTTCCTACTCCAACTTTaGCCGTTACACTTTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FAVYKLTYTWACLDNGQVFLLQL*PLHFLE Trigger: CTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAA...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACCTGCAGAGATGAAATaGAGCAGTTTTTCAGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: AVYKLTYTWACLDNGQVVPAEMK*SSFSGY Trigger: GTAACCTGAAAAACTGCTGCATTTCATCTCTGCAGG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAAATTAACCTATACTTaGGCTTGTCTGGACAATGGC | + |
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Preference number: 2 (lower is better) Translates to: LYLGLSGQWPGCKTEALFKLTYT*ACLDNG Trigger: GCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR TCA 90 bp | CAACTTTGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCACCAAAGCCAAACAATaGCAACAATGTATCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QLCPLHFLEKQKYSSLPGTKAKQ*QQCIFL Trigger: AAGGAAGATACATTGTTGTCATTGTTTGGCTTTGGT...GCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR TCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTACCAAAGCCAAACAATaGCAACAATGTATCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LYLGLSGQWPGCKTEALFTKAKQ*QQCIFL Trigger: AAGGAAGATACATTGTTGTCATTGTTTGGCTTTGGT...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGGCCTCCATGTTCCAATaGACTGTTGGAATATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: KLTYTWACLDNGQVVKLKASMFQ*TVGICQ Trigger: TTGACATATTCCAACAGTTCATTGGAACATGGAGGC...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTGCTTCACTTATGCCAACAAATGCTGGCAACTTGATCTCGTTAATAAAATTCCTACTCCAACTTTaGCCGTTACACTTTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: CGASLMPTNAGNLISLIKFLLQL*PLHFLE Trigger: CTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAA...TTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGGCATAAGTGAAGCACCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTACCTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTAGGCTTGTCTGGACAATaGCCAGGTTGTAAAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: FYLCFGLNSTWITVVLHLGLSGQ*PGCKTE Trigger: TTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCC...TAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAGGTAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTTGTTTTTTATATTCACGCTaGTGGGCGATCATTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PLHFLEKQKYSSLPGLSCFLYSR*WAIISF Trigger: AAAAGAAATGATCGCCCAGCAGCGTGAATATAAAAA...ACAAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTGCTTCACTTATGCCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAAAATTAACCTATACTTaGGCTTGTCTGGACAATGGC | + |
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Preference number: 2 (lower is better) Translates to: CGASLMPTNAGNLISLIKKLTYT*ACLDNG Trigger: GCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT...TTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGGCATAAGTGAAGCACCACA 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTATGCCAAACCAAAGCCAAACAATaGCAACAATGTATCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LCFGLNSTWITVVLHLCQTKAKQ*QQCIFL Trigger: AAGGAAGATACATTGTTGTCATTGTTTGGCTTTGGT...TTGGCATAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
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| 3UTR-3UTR TCA 90 bp | CCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAATTACAAACTCAGCTACAGCCTCCATGTTCCAATaGACTGTTGGAATATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: PTNAGNLISLIKITNSATASMFQ*TVGICQ Trigger: TTGACATATTCCAACAGTTCATTGGAACATGGAGGC...TGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTACCTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTAACTTATGCCAACAAATaGTGGCAACTTGATCTCGTT | + |
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Preference number: 2 (lower is better) Translates to: FYLCFGLNSTWITVVLHLTYANK*WQLDLV Trigger: AACGAGATCAAGTTGCCAGCATTTGTTGGCATAAGT...TAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAGGTAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
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| 3UTR-3UTR GCA 90 bp | CCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAATTACAAACTCAGCTACACCTGCAGAGATGAAATaGAGCAGTTTTTCAGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: PTNAGNLISLIKITNSATPAEMK*SSFSGY Trigger: GTAACCTGAAAAACTGCTGCATTTCATCTCTGCAGG...TGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| 3UTR TCA 72 bp | CCTGGCCTTTCTTGTTCTTGGAGTACGCCCTGTTGTTaGACTGCTGCCATTTCACCTTCTGGTCCTCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: PGLSCSWSTPCC*TAAISPSGPLA Trigger: AGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR GCA 72 bp | TTCTTGTTCTTGGAGTACGCCCTGTTGTTGAACTGCTaGCATTTCACCTTCTGGTCCTCTCGCTCCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: FLFLEYALLLNC*HFTFWSSRSCS Trigger: GGAGCAGGAGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR GCA 72 bp | CCTTTCTTGTTCTTGGAGTACGCCCTGTTGTTGAACTaGTGCCATTTCACCTTCTGGTCCTCTCGCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PFLFLEYALLLN*CHFTFWSSRSC Trigger: GCAGGAGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCTTTACCTGGCCTTTCTaGTTCTTGGAGTACGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: WACLDNGQVVKLKLSLAGFTWPF*FLEYAL Trigger: CAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAA...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR CCA 72 bp | CTTCCTTCCTTCTTCTACAGGCTTGAGGTTCAGCAATaGCGTCACTTCGGCATTGCCATAAACAGCAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LPSFFYRLEVQQ*RHFGIAINSKG Trigger: ACCTTTGCTGTTTATGGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CAA 90 bp | CAACTTTGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCTTTGACATGGGTTTGTaGCCGCTGTCCTCTTTCGCC | + |
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Preference number: 3 (lower is better) Translates to: QLCPLHFLEKQKYSSLPGFDMGL*PLSSFA Trigger: GGCGAAAGAGGACAGCGGCAACAAACCCATGTCAAA...GCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACCTTCTTCTACAGGCTaGAGGTTCAGCAATGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: AVYKLTYTWACLDNGQVVPSSTG*RFSNGV Trigger: GACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAGG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAGAGTACGCCCTGTTGTaGAACTGCTGCCATTTCACC | + |
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Preference number: 3 (lower is better) Translates to: AVYKLTYTWACLDNGQVVEYALL*NCCHFT Trigger: GGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTC...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTCCTTCTTCTACAGGCTaGAGGTTCAGCAATGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: FAVYKLTYTWACLDNGQVPSSTG*RFSNGV Trigger: GACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAGG...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| 3UTR-3UTR CAA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGGAGTACGCCCTGTTGTaGAACTGCTGCCATTTCACC | + |
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Preference number: 3 (lower is better) Translates to: KLTYTWACLDNGQVVKLKEYALL*NCCHFT Trigger: GGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTC...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| 3UTR TCA 72 bp | ATGGCGTCACTTCGGCATTGCCATAAACAGCAAAGGTaGTTGCAGCGGTGCCATTTTCTTCATCTATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: MASLRHCHKQQR*LQRCHFLHLSL Trigger: AAGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGTTTATGGCAATGCCGAAGTGACGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| 3UTR-3UTR CAA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTCCTAGAAAAGTTGCCTaGTTCAACACACTGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LYLGLSGQWPGCKTEALFPRKVA*FNTLRK Trigger: CTTCCTCAGTGTGTTGAACAAGGCAACTTTTCTAGG...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGGTTCCTACTCCAACTTaGCCCGTTACACTTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLTYTWACLDNGQVVKLKVPTPT*PVTLSG Trigger: TCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAAC...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAATTACAAACTCAGCTACATTTGACATGGGTTTGTaGCCGCTGTCCTCTTTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: PTNAGNLISLIKITNSATFDMGL*PLSSFA Trigger: GGCGAAAGAGGACAGCGGCAACAAACCCATGTCAAA...TGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTATGCCAAGTTCCTACTCCAACTTaGCCCGTTACACTTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCFGLNSTWITVVLHLCQVPTPT*PVTLSG Trigger: TCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAAC...TTGGCATAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGTACTGTGTCATGGGCTaGTCAGCAATTCCACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KLTYTWACLDNGQVVKLKYCVMG*SAIPQV Trigger: AACTTGTGGAATTGCTGACAAGCCCATGACACAGTA...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAGTACTTGGATGTATCTaGATACTGTGTCATGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AVYKLTYTWACLDNGQVVVLGCI*ILCHGL Trigger: AAGCCCATGACACAGTATCAAGATACATCCAAGTAC...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTATGTTCCAATGAACTGTaGGAATATGTCAAGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AVYKLTYTWACLDNGQVVCSNEL*EYVKCK Trigger: TTTGCACTTGACATATTCCAACAGTTCATTGGAACA...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAAAAATAGTATCTACACTGTACACAGGGCTGTACATCAGCTTTTGTCTTCCTAGAAAAGTTGCCTaGTTCAACACACTGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTKIVSTLYTGLYISFCLPRKVA*FNTLRK Trigger: CTTCCTCAGTGTGTTGAACAAGGCAACTTTTCTAGG...AAGACAAAAGCTGATGTACAGCCCTGTGTACAGTGTAGATACTATTTTTGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGTGTTCCAATGAACTGTaGGAATATGTCAAGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLTYTWACLDNGQVVKLKCSNEL*EYVKCK Trigger: TTTGCACTTGACATATTCCAACAGTTCATTGGAACA...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTACCTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTAGCTGTACATCAGCTTTaGTCTTCCCATAGAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: FYLCFGLNSTWITVVLHLAVHQL*SSHRNS Trigger: ACTGTTTCTATGGGAAGACAAAAGCTGATGTACAGC...TAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAGGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTACCTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTAGTACTTGGATGTATCTaGATACTGTGTCATGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FYLCFGLNSTWITVVLHLVLGCI*ILCHGL Trigger: AAGCCCATGACACAGTATCAAGATACATCCAAGTAC...TAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAGGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTACCTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTATGTTCCAATGAACTGTaGGAATATGTCAAGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FYLCFGLNSTWITVVLHLCSNEL*EYVKCK Trigger: TTTGCACTTGACATATTCCAACAGTTCATTGGAACA...TAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAGGTAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
||
| 3UTR CAA 72 bp | ACCTGGCCTTTCTTGTTCTTGGAGTACGCCCTGTTGTaGAACTGCTGCCATTTCACCTTCTGGTCCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TWPFLFLEYALL*NCCHFTFWSSR Trigger: GCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGGCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCCTCCGAAGGCTGAGTTaGCAGAAGGTCTTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WACLDNGQVVKLKLSLAGLRRLS*QKVFGQ Trigger: CTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAG...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTACCTGGCCTTTCTTGTTCTTGGAGTACGCCCTGTTGTTGAACTGCTGCAGAAGCAAAACTGTCTaGGCTTGCGAGCGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LFTWPFLFLEYALLLNCCRSKTV*ACERLR Trigger: TCGGAGACGCTCGCAAGCTCAGACAGTTTTGCTTCT...GCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTACCTGGCCTTTCTTGTTCTTGGAGTACGCCCTGTTGTTGAACTGCTGCGTCCCCTACTTTCCATaGATGAGTGGGCTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFTWPFLFLEYALLLNCCVPYFP*MSGLSR Trigger: TCTACTCAGCCCACTCATTCATGGAAAGTAGGGGAC...GCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCGCCCTGTTGTTGAACTaGTGCCATTTCACCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WACLDNGQVVKLKLSLAGALLLN*CHFTFW Trigger: CCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGC...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCCTCCGAAGGCTGAGTTaGCAGAAGGTCTTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLYLGLSGQWPGCKTEALLRRLS*QKVFGQ Trigger: CTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAG...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTTCAGCAATGGCGTCACTTCGGCATTGCCATAAACAGCAAAGGTGATTGCTGCACTCAAGCACTCTaGTTACTGAAGGAAGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVQQWRHFGIAINSKGDCCTQAL*LLKEGV Trigger: AACGCCTTCCTTCAGTAAGCAGAGTGCTTGAGTGCA...GCAATCACCTTTGCTGTTTATGGCAATGCCGAAGTGACGCCATTGCTGAACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR GCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCGCAGGTCAAAGGGGGTaGACTCAAGCACTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NLYLGLSGQWPGCKTEALAGQRG*TQALCL Trigger: TAAGCAGAGTGCTTGAGTGCACCCCCTTTGACCTGC...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| 3UTR CAA 72 bp | TTTACCTGGCCTTTCTTGTTCTTGGAGTACGCCCTGTaGTTGAACTGCTGCCATTTCACCTTCTGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTWPFLFLEYAL*LNCCHFTFWSS Trigger: AGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR TCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTCTCCGAAGGCTGAGTTaGCAGAAGGTCTTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYLGLSGQWPGCKTEALFLRRLS*QKVFGQ Trigger: CTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAG...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCGTCCCCTACTTTCCATaGATGAGTGGGCTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NLYLGLSGQWPGCKTEALVPYFP*MSGLSR Trigger: TCTACTCAGCCCACTCATTCATGGAAAGTAGGGGAC...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | CCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTTGTCTCCGAAGGCTGAGTTaGCAGAAGGTCTTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLHFLEKQKYSSLPGLSCLRRLS*QKVFGQ Trigger: CTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAG...ACAAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR TCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTCTTCTTCTACAGGCTTaGGGTTCAGCAATGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLGLSGQWPGCKTEALFLLLQA*GSAMAS Trigger: TGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAG...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAGCACTCTGCTTACTaGAGGAAGGCGTTTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVKHSAY*RKAFRG Trigger: TCCCCGAAACGCCTTCCTTCAGTAAGCAGAGTGCTT...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR CCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACTTGAGGTTCAGCAATaGCGTCACTTCGGCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVLEVQQ*RHFGIA Trigger: GGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGAGCGTCTCCGAAGGCTaGGTTGACAGAAGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLTYTWACLDNGQVVKLKSVSEG*VDRRSL Trigger: CAAAGACCTTCTGTCAACTCAGCCTTCGGAGACGCT...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTAGAAGCAAAACTGTCTaGGCTTGCGAGCGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FAVYKLTYTWACLDNGQVRSKTV*ACERLR Trigger: TCGGAGACGCTCGCAAGCTCAGACAGTTTTGCTTCT...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACTTCTTCTACAGGCTTaGGGTTCAGCAATGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVLLLQA*GSAMAS Trigger: TGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR GCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTATTGACATGGGTTTGTTaGCGCTGTCCTCTTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVLTWVC*RCPLSP Trigger: AGGCGAAAGAGGACAGCGGCAACAAACCCATGTCAA...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR GCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAGCCCTGTTGTTGAACTaGTGCCATTTCACCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVALLLN*CHFTFW Trigger: CCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGC...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR GCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTCCTACTCCAACTTTaGCCGTTACACTTTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLYLGLSGQWPGCKTEALFLLQL*PLHFLE Trigger: CTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAA...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | CTACTCCAACTTTGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTAGTCCCCTACTTTCCATaGATGAGTGGGCTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLQLCPLHFLEKQKYSSLVPYFP*MSGLSR Trigger: TCTACTCAGCCCACTCATTCATGGAAAGTAGGGGAC...TAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTAAGGCGTTTCGGGGATaGAGAGAGCCATTGCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FAVYKLTYTWACLDNGQVKAFRG*REPLQI Trigger: GATTTGCAATGGCTCTCTGCATCCCCGAAACGCCTT...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTATGCCAACTTGAGGTTCAGCAATaGCGTCACTTCGGCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCFGLNSTWITVVLHLCQLEVQQ*RHFGIA Trigger: GGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAG...TTGGCATAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025997.7 |
||
| CDS-3UTR CCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCATACTCCTCTTTACCTaGCCTTTCTTGTTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLYLGLSGQWPGCKTEALILLFT*PFLFLE Trigger: CTCCAAGAACAAGAAAGGCCAGGTAAAGAGGAGTAT...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCGCCCGTTACACTTTCTaGAGAAGCAAAAATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLYLGLSGQWPGCKTEALARYTF*RSKNTP Trigger: AGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGC...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACATAAACAGCAAAGGTaGTTGCAGCGGTGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVHKQQR*LQRCHF Trigger: AAAATGGCACCGCTGCAATCACCTTTGCTGTTTATG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTAAACTGCTCCTTCATTaGCAGATGGGCAGCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FAVYKLTYTWACLDNGQVKLLLH*QMGSSY Trigger: GTAACTGCTGCCCATCTGTCAATGAAGGAGCAGTTT...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR GCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAACAGCAAAGGTGATTaGAGCGGTGCCATTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVNSKGD*SGAIFF Trigger: GAAGAAAATGGCACCGCTGCAATCACCTTTGCTGTT...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTCTGTTGTTGAACTGCTaGCATTTCACCTTCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FAVYKLTYTWACLDNGQVLLLNC*HFTFWS Trigger: GGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAG...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR GCA 90 bp | GCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTTGATGCAGAGAGCCATTaGAAATCCTTCTTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARYTFWRSKNTPLYLAFLDAESH*KSFFSF Trigger: GAAACTGAAGAAGGATTTGCAATGGCTCTCTGCATC...AAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR TCA 90 bp | TTTACAAAAATAGTATCTACACTGTACACAGGGCTGTACATCAGCTTTTGTCTTAGAAGCAAAACTGTCTaGGCTTGCGAGCGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FTKIVSTLYTGLYISFCLRSKTV*ACERLR Trigger: TCGGAGACGCTCGCAAGCTCAGACAGTTTTGCTTCT...AAGACAAAAGCTGATGTACAGCCCTGTGTACAGTGTAGATACTATTTTTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
||
| CDS-3UTR CCA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAATACTCCTCTTTACCTaGCCTTTCTTGTTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVYKLTYTWACLDNGQVVILLFT*PFLFLE Trigger: CTCCAAGAACAAGAAAGGCCAGGTAAAGAGGAGTAT...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTCTTGATACTGTGTCATaGGCTTGTCAGCAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FAVYKLTYTWACLDNGQVLDTVS*ACQQFH Trigger: GTGGAATTGCTGACAAGCCCATGACACAGTATCAAG...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTAAGCATCAGATGTTGTaGTCTACATATCAGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FAVYKLTYTWACLDNGQVKHQML*STYQQV Trigger: GACCTGCTGATATGTAGATCACAACATCTGATGCTT...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR GCA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTTTATATTCACGCTaGTGGGCGATCATTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLYLGLSGQWPGCKTEALFLYSR*WAIISF Trigger: AAAAGAAATGATCGCCCAGCAGCGTGAATATAAAAA...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CCA 90 bp | CTACTCCAACTTTGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTATCCTTCATTGACAGATaGGCAGCAGTTACAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLQLCPLHFLEKQKYSSLSFIDR*AAVTVI Trigger: GATTACTGTAACTGCTGCCCATCTGTCAATGAAGGA...TAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR GCA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTTTTTTATATTCACGCTaGTGGGCGATCATTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLGLSGQWPGCKTEALFFLYSR*WAIISF Trigger: AAAAGAAATGATCGCCCAGCAGCGTGAATATAAAAA...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTTCACTTATGCCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAGCCCGTTACACTTTCTaGAGAAGCAAAAATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGASLMPTNAGNLISLIKARYTF*RSKNTP Trigger: AGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGC...TTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGGCATAAGTGAAGCACCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025997.7 |
||
| CDS-3UTR TCA 90 bp | TTTACAAAAATAGTATCTACACTGTACACAGGGCTGTACATCAGCTTTTGTCTTCATAAACAGCAAAGGTaGTTGCAGCGGTGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTKIVSTLYTGLYISFCLHKQQR*LQRCHF Trigger: AAAATGGCACCGCTGCAATCACCTTTGCTGTTTATG...AAGACAAAAGCTGATGTACAGCCCTGTGTACAGTGTAGATACTATTTTTGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025997.7 |
||
| CDS-3UTR CCA 90 bp | CTACTCCAACTTTGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTATTGACAGAAGGTCTTTaGTCAGTTCTATTACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQLCPLHFLEKQKYSSLLTEGL*SVLLLP Trigger: TGGAAGTAATAGAACTGACCAAAGACCTTCTGTCAA...TAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR CCA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGTTGACAGAAGGTCTTTaGTCAGTTCTATTACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLTYTWACLDNGQVVKLKLTEGL*SVLLLL Trigger: AAGAAGTAATAGAACTGACCAAAGACCTTCTGTCAA...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025997.7 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS GCA 90 bp | GTGATCTACATATCAGCAGGTCAAAGGGGGTGCACTCAAGCACTCTaGTTACTGAAGGAAGGCGTTTCGGGGATGCAGAGAGCCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VIYISAGQRGCTQAL*LLKEGVSGMQRAIA Trigger: TGCAATGGCTCTCTGCATCCCCGAAACGCCTTCCTTCAGTAAGCAGAGTGCTTGAGTGCACCCCCTTTGACCTGCTGATATGTAGATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCCAAAACTGTCTGAGCTaGCGAGCGTCTCCGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WACLDNGQVVKLKLSLAGQNCLS*RASPKA Trigger: AGCCTTCGGAGACGCTCGCAAGCTCAGACAGTTTTG...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS TCA 90 bp | ACATATCAGCAGGTCAAAGGGGGTGCACTCAAGCACTCTGCTTACTaGAGGAAGGCGTTTCGGGGATGCAGAGAGCCATTGCAAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TYQQVKGGALKHSAY*RKAFRGCREPLQIL Trigger: AAGGATTTGCAATGGCTCTCTGCATCCCCGAAACGCCTTCCTTCAGTAAGCAGAGTGCTTGAGTGCACCCCCTTTGACCTGCTGATATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTTACCTGGCCTTTCTTGTTCTTGGAGTACGCCCTGTTGTTGAACTGCTGCCACACGGCCATGCACTaGTCCCCTACTTTCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFTWPFLFLEYALLLNCCHTAMH*SPTFHE Trigger: TTCATGGAAAGTAGGGGACAAGTGCATGGCCGTGTG...GCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCCACACGGCCATGCACTaGTCCCCTACTTTCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: WACLDNGQVVKLKLSLAGHTAMH*SPTFHE Trigger: TTCATGGAAAGTAGGGGACAAGTGCATGGCCGTGTG...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCTTTGACATGGGTTTGTaGCCGCTGTCCTCTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WACLDNGQVVKLKLSLAGFDMGL*PLSSFA Trigger: GGCGAAAGAGGACAGCGGCAACAAACCCATGTCAAA...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS GCA 90 bp | GAAGCATCAGATGTTGTGATCTACATATCAGCAGGTCAAAGGGGGTaGACTCAAGCACTCTGCTTACTGAAGGAAGGCGTTTCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EASDVVIYISAGQRG*TQALCLLKEGVSGM Trigger: CATCCCCGAAACGCCTTCCTTCAGTAAGCAGAGTGCTTGAGTGCACCCCCTTTGACCTGCTGATATGTAGATCACAACATCTGATGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCAAGGGCAGCTTCTACTaGCTGGAGTTGAGCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WACLDNGQVVKLKLSLAGKGSFY*LELSFV Trigger: TACAAAGCTCAACTCCAGCAAGTAGAAGCTGCCCTT...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| CDS-3UTR CAA 90 bp | TGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTCAAAACTGTCTGAGCTaGCGAGCGTCTCCGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPLHFLEKQKYSSLPGLSQNCLS*RASPKA Trigger: AGCCTTCGGAGACGCTCGCAAGCTCAGACAGTTTTG...AGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS TCA 90 bp | GCAGCAGTTACAGTAATCGGCAATTCCAGGAAGCATCAGATGTTGTaGTCTACATATCAGCAGGTCAAAGGGGGTGCACTCAAGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAVTVIGNSRKHQML*STYQQVKGGALKHS Trigger: AGAGTGCTTGAGTGCACCCCCTTTGACCTGCTGATATGTAGATCACAACATCTGATGCTTCCTGGAATTGCCGATTACTGTAACTGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCTTCTACTTGCTGGAGTaGAGCTTTGTAGCTAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WACLDNGQVVKLKLSLAGFYLLE*SFVASQ Trigger: TTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAA...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| CDS-3UTR CAA 90 bp | GAGGTTCAGCAATGGCGTCACTTCGGCATTGCCATAAACAGCAAAGGTGATTGCTTCTACTTGCTGGAGTaGAGCTTTGTAGCTAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EVQQWRHFGIAINSKGDCFYLLE*SFVASQ Trigger: TTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAA...GCAATCACCTTTGCTGTTTATGGCAATGCCGAAGTGACGCCATTGCTGAACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
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| CDS-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACAAAACTGTCTGAGCTaGCGAGCGTCTCCGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVYKLTYTWACLDNGQVVQNCLS*RASPKA Trigger: AGCCTTCGGAGACGCTCGCAAGCTCAGACAGTTTTG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | GCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTTCACACGGCCATGCACTaGTCCCCTACTTTCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARYTFWRSKNTPLYLAFLHTAMH*SPTFHE Trigger: TTCATGGAAAGTAGGGGACAAGTGCATGGCCGTGTG...AAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR CAA 90 bp | AACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTACCTGGCCTTTCTaGTTCTTGGAGTACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLYLGLSGQWPGCKTEALFTWPF*FLEYAL Trigger: CAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAA...GAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTACACACGGCCATGCACTaGTCCCCTACTTTCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: AVYKLTYTWACLDNGQVVHTAMH*SPTFHE Trigger: TTCATGGAAAGTAGGGGACAAGTGCATGGCCGTGTG...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTATTTGACATGGGTTTGTaGCCGCTGTCCTCTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVYKLTYTWACLDNGQVVFDMGL*PLSSFA Trigger: GGCGAAAGAGGACAGCGGCAACAAACCCATGTCAAA...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTTTGGAGTACGCCCTGTaGTTGAACTGCTGCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYLGLSGQWPGCKTEALFLEYAL*LNCCHF Trigger: GAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAA...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTAGCAGGCGTTGACAGAAGGTCTTaGGTCAGTTCTATTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WACLDNGQVVKLKLSLAGVDRRS*VSSITS Trigger: AGAAGTAATAGAACTGACCAAAGACCTTCTGTCAAC...GCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025997.7 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTATCTCCGAAGGCTGAGTaGACAGAAGGTCTTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVYKLTYTWACLDNGQVVSPKAE*TEGLWS Trigger: TGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGA...TACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTTTGGCTTAAACTCAACTTGGATAACTGTGGTGCTTCACTTATGCCAACAAAACTGTCTGAGCTaGCGAGCGTCTCCGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCFGLNSTWITVVLHLCQQNCLS*RASPKA Trigger: AGCCTTCGGAGACGCTCGCAAGCTCAGACAGTTTTG...TTGGCATAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCCTTCTTCTACAGGCTaGAGGTTCAGCAATGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KLTYTWACLDNGQVVKLKPSSTG*RFSNGV Trigger: GACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAGG...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGAGTACGCCCTGTTGTaGAACTGCTGCCATTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FAVYKLTYTWACLDNGQVEYALL*NCCHFT Trigger: GGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTC...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTGTTCCTACTCCAACTTaGCCCGTTACACTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LYLGLSGQWPGCKTEALFVPTPT*PVTLSG Trigger: TCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAAC...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS CCA 90 bp | CTGAGCTTGCGAGCGTCTCCGAAGGCTGAGTTGACAGAAGGTCTTTaGTCAGTTCTATTACTTCTTGCAAATCCTTCTTCAGTTTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LSLRASPKAELTEGL*SVLLLLANPSSVSI Trigger: TATTGAAACTGAAGAAGGATTTGCAAGAAGTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGACGCTCGCAAGCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000236245.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCCTTTCTTTCTACTTGCTGGAGTaGAGCTTTGTAGCTAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CPLHFLEKQKYSSLPGLSFYLLE*SFVASQ Trigger: TTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAA...AGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235830.2 ENSMUST00000236962.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGTTGGAGTACGCCCTGTaGTTGAACTGCTGCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLTYTWACLDNGQVVKLKLEYAL*LNCCHF Trigger: GAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAA...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCCGTTTATAAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTTTTACCTGGCCTTTCTaGTTCTTGGAGTACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FAVYKLTYTWACLDNGQVFTWPF*FLEYAL Trigger: CAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAA...AACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGTGCTTCACTTATGCCAACAAATGCTGGCAACTTGATCTCGTTAATAAAATCTCCGAAGGCTGAGTaGACAGAAGGTCTTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CGASLMPTNAGNLISLIKSPKAE*TEGLWS Trigger: TGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGA...TTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGGCATAAGTGAAGCACCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 |
||
| CDS-3UTR CAA 90 bp | CTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGCTCTCTTTGTACTTGGATGTATCTaGATACTGTGTCATGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LYLGLSGQWPGCKTEALFVLGCI*ILCHGL Trigger: AAGCCCATGACACAGTATCAAGATACATCCAAGTAC...AAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
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| CDS-3UTR CAA 90 bp | AAATTAACCTATACTTGGGCTTGTCTGGACAATGGCCAGGTTGTAAAACTGAAGTTCTACTTGCTGGAGTaGAGCTTTGTAGCTAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: KLTYTWACLDNGQVVKLKFYLLE*SFVASQ Trigger: TTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAA...CTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| CDS-3UTR CAA 90 bp | CAACTTTGCCCGTTACACTTTCTGGAGAAGCAAAAATACTCCTCTTTACCTGGCGTTGACAGAAGGTCTTaGGTCAGTTCTATTACTTCT | + |
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Preference number: 5 (lower is better) Translates to: QLCPLHFLEKQKYSSLPGVDRRS*VSSITS Trigger: AGAAGTAATAGAACTGACCAAAGACCTTCTGTCAAC...GCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236962.2 |
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| CDS-3UTR CAA 90 bp | TTTACAAAAATAGTATCTACACTGTACACAGGGCTGTACATCAGCTTTTGTCTTGAGTACGCCCTGTTGTaGAACTGCTGCCATTTCACC | + |
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Preference number: 5 (lower is better) Translates to: FTKIVSTLYTGLYISFCLEYALL*NCCHFT Trigger: GGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTC...AAGACAAAAGCTGATGTACAGCCCTGTGTACAGTGTAGATACTATTTTTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025997.7 |
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| CDS TCA 90 bp | GTCAGTTCTATTACTTCCATTAATTACTTTTCCTCCCCCAAGTTCTaGAACTGCTCCTTCATTGACAGATGGGCAGCAGTTACAGTAATC | + |
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Preference number: 5 (lower is better) Translates to: VSSITSINYFSSPKF*NCSFIDRWAAVTVI Trigger: GATTACTGTAACTGCTGCCCATCTGTCAATGAAGGAGCAGTTTCAGAACTTGGGGGAGGAAAAGTAATTAATGGAAGTAATAGAACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS-3UTR CAA 90 bp | CCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAATTACAAACTCAGCTACAGTTCCTACTCCAACTTaGCCCGTTACACTTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PTNAGNLISLIKITNSATVPTPT*PVTLSG Trigger: TCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAAC...TGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025997.7 |
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| CDS-3UTR CAA 90 bp | CCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAATTACAAACTCAGCTACATACTGTGTCATGGGCTaGTCAGCAATTCCACAAGTT | + |
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Preference number: 5 (lower is better) Translates to: PTNAGNLISLIKITNSATYCVMG*SAIPQV Trigger: AACTTGTGGAATTGCTGACAAGCCCATGACACAGTA...TGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025997.7 |
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| CDS-3UTR CAA 90 bp | CCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAATTACAAACTCAGCTACAGTTGACAGAAGGTCTTaGGTCAGTTCTATTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: PTNAGNLISLIKITNSATVDRRS*VSSITS Trigger: GGAAGTAATAGAACTGACCAAAGACCTTCTGTCAAC...TGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS-3UTR CAA 90 bp | CCAACAAATGCTGGCAACTTGATCTCGTTAATAAAAATTACAAACTCAGCTACAGTTGACAGAAGGTCTTaGGTCAGTTCTATTACTTCT | + |
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Preference number: 5 (lower is better) Translates to: PTNAGNLISLIKITNSATVDRRS*VSSITS Trigger: AGAAGTAATAGAACTGACCAAAGACCTTCTGTCAAC...TGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025997.7 |
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| CDS TCA 72 bp | CAGGTCAAAGGGGGTGCACTCAAGCACTCTGCTTACTaGAGGAAGGCGTTTCGGGGATGCAGAGAGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: QVKGGALKHSAY*RKAFRGCREPL Trigger: CAATGGCTCTCTGCATCCCCGAAACGCCTTCCTTCAGTAAGCAGAGTGCTTGAGTGCACCCCCTTTGACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS GCA 72 bp | CTTCGTAACACTGTCCGTCTTCACTCCACACGGCCATaGACTTGTCCCCTACTTTCCATGAATGAGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LRNTVRLHSTRP*TCPLLSMNEWA Trigger: AGCCCACTCATTCATGGAAAGTAGGGGACAAGTGCATGGCCGTGTGGAGTGAAGACGGACAGTGTTACGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025997.7 ENSMUST00000237529.2 |
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| CDS GCA 72 bp | ATATCAGCAGGTCAAAGGGGGTGCACTCAAGCACTCTaGTTACTGAAGGAAGGCGTTTCGGGGATGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ISAGQRGCTQAL*LLKEGVSGMQR Trigger: TCTCTGCATCCCCGAAACGCCTTCCTTCAGTAAGCAGAGTGCTTGAGTGCACCCCCTTTGACCTGCTGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS GCA 72 bp | AGATATCATGGTGTCCGTCTTCACTCCACACGGCCATaGACTTGTCCCCTACTTTCCATGAATGAGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RYHGVRLHSTRP*TCPLLSMNEWA Trigger: AGCCCACTCATTCATGGAAAGTAGGGGACAAGTGCATGGCCGTGTGGAGTGAAGACGGACACCATGATATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236962.2 |
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| CDS TCA 72 bp | GCAAAACTGTCTGAGCTTGCGAGCGTCTCCGAAGGCTaGGTTGACAGAAGGTCTTTGGTCAGTTCTATTACT | + |
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Preference number: 6 (lower is better) Translates to: AKLSELASVSEG*VDRRSLVSSIT Trigger: AGTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGACGCTCGCAAGCTCAGACAGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236245.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| CDS GCA 72 bp | GATGTTGTGATCTACATATCAGCAGGTCAAAGGGGGTaGACTCAAGCACTCTGCTTACTGAAGGAAGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: DVVIYISAGQRG*TQALCLLKEGV Trigger: AACGCCTTCCTTCAGTAAGCAGAGTGCTTGAGTGCACCCCCTTTGACCTGCTGATATGTAGATCACAACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS CAA 72 bp | AACTGTCTGAGCTTGCGAGCGTCTCCGAAGGCTGAGTaGACAGAAGGTCTTTGGTCAGTTCTATTACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: NCLSLRASPKAE*TEGLWSVLLLP Trigger: TGGAAGTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGACGCTCGCAAGCTCAGACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS TCA 72 bp | ACAGTAATCGGCAATTCCAGGAAGCATCAGATGTTGTaGTCTACATATCAGCAGGTCAAAGGGGGTGCACTC | + |
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Preference number: 6 (lower is better) Translates to: TVIGNSRKHQML*STYQQVKGGAL Trigger: GAGTGCACCCCCTTTGACCTGCTGATATGTAGATCACAACATCTGATGCTTCCTGGAATTGCCGATTACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS TCA 72 bp | CTTTTCCTCCCCCAAGTTCTGAAACTGCTCCTTCATTaGCAGATGGGCAGCAGTTACAGTAATCGGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: LFLPQVLKLLLH*QMGSSYSNRQF Trigger: GAATTGCCGATTACTGTAACTGCTGCCCATCTGTCAATGAAGGAGCAGTTTCAGAACTTGGGGGAGGAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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| CDS CAA 72 bp | AACTGTCTGAGCTTGCGAGCGTCTCCGAAGGCTGAGTaGACAGAAGGTCTTTGGTCAGTTCTATTACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NCLSLRASPKAE*TEGLWSVLLLL Trigger: AAGAAGTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGACGCTCGCAAGCTCAGACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000236245.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| CDS CCA 72 bp | CGAGCGTCTCCGAAGGCTGAGTTGACAGAAGGTCTTTaGTCAGTTCTATTACTTCTTGCAAATCCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RASPKAELTEGL*SVLLLLANPSS Trigger: TGAAGAAGGATTTGCAAGAAGTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGACGCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025997.7 ENSMUST00000236245.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| CDS CAA 72 bp | TTCATTTTCTCCATTTCCAGAAAGGGCAGCTTCTACTaGCTGGAGTTGAGCTTTGTAGCTAGCCAACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: FIFSISRKGSFY*LELSFVASQLF Trigger: AAACAGTTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAAGCTGCCCTTTCTGGAAATGGAGAAAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025997.7 ENSMUST00000235830.2 ENSMUST00000236245.2 ENSMUST00000236962.2 ENSMUST00000237529.2 |
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| CDS TCA 72 bp | ATTACTTCCATTAATTACTTTTCCTCCCCCAAGTTCTaGAACTGCTCCTTCATTGACAGATGGGCAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: ITSINYFSSPKF*NCSFIDRWAAV Trigger: AACTGCTGCCCATCTGTCAATGAAGGAGCAGTTTCAGAACTTGGGGGAGGAAAAGTAATTAATGGAAGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235830.2 |
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