Pregenerated sensors for SMIM8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028295Ensembl transcript IDs: ENSMUST00000029972.4, ENSMUST00000108131.8, ENSMUST00000108132.8, ENSMUST00000108133.10, ENSMUST00000108134.8
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATTGCTGCAAAGGCACAATCCACTCTAAAACGTTAGAAACTCCATaGAAATGGAAGAGTACTGGGTACTTTTATTATACAGAATTTAAT | + |
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Preference number: 1 (lower is better) Translates to: HCCKGTIHSKTLETP*KWKSTGYFYYTEFN Trigger: ATTAAATTCTGTATAATAAAAGTACCCAGTACTCTTCCATTTGCATGGAGTTTCTAACGTTTTAGAGTGGATTGTGCCTTTGCAGCAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| 3UTR CCA 90 bp | CAGAATTTAATGCCTTCAGCTGTAATGAGACTAAACTCACCACAGTaGACTGCTTTCAATTTTATATTCTCCCTTGTTAACATATTATGG | + |
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Preference number: 1 (lower is better) Translates to: QNLMPSAVMRLNSPQ*TAFNFIFSLVNILW Trigger: CCATAATATGTTAACAAGGGAGAATATAAAATTGAAAGCAGTCCACTGTGGTGAGTTTAGTCTCATTACAGCTGAAGGCATTAAATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| 3UTR CCA 72 bp | ATGCCTTCAGCTGTAATGAGACTAAACTCACCACAGTaGACTGCTTTCAATTTTATATTCTCCCTTGTTAAC | + |
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Preference number: 3 (lower is better) Translates to: MPSAVMRLNSPQ*TAFNFIFSLVN Trigger: GTTAACAAGGGAGAATATAAAATTGAAAGCAGTCCACTGTGGTGAGTTTAGTCTCATTACAGCTGAAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR GCA 90 bp | GCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGAATAAGGTGGTTGTGTaGGCCCCTCGGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALTVFLSKVSEPIITLHLNKVVV*APRRPG Trigger: CCCAGGCCTCCGAGGGGCGCACACAACCACCTTATT...CAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR GCA 90 bp | TGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTAATAAGGTGGTTGTGTaGGCCCCTCGGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CTNSLSFKGVGAYNNTPPNKVVV*APRRPG Trigger: CCCAGGCCTCCGAGGGGCGCACACAACCACCTTATT...AGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR GCA 90 bp | GAACAAGAAACAATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCAATAAGGTGGTTGTGTaGGCCCCTCGGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EQETILCTNSLSFKGVGANKVVV*APRRPG Trigger: CCCAGGCCTCCGAGGGGCGCACACAACCACCTTATT...GGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAATTGTTTCTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR GCA 90 bp | ATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTAATAAGGTGGTTGTGTaGGCCCCTCGGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ILCTNSLSFKGVGAYNNTNKVVV*APRRPG Trigger: CCCAGGCCTCCGAGGGGCGCACACAACCACCTTATT...AGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CCA 90 bp | TGGAACAAGAAACAATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCAGCTCGAAATAAGGTaGTTGTGTGCGCCCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: WNKKQFCALTVFLSKVSEQLEIR*LCAPLG Trigger: TCCGAGGGGCGCACACAACCACCTTATTTCGAGCTG...CTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAATTGTTTCTTGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCAGCTCGAAATAAGGTaGTTGTGTGCGCCCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: ILCTNSLSFKGVGAYNNTQLEIR*LCAPLG Trigger: TCCGAGGGGCGCACACAACCACCTTATTTCGAGCTG...AGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CCA 90 bp | GCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGGCCCTTCACTGTCAATaGCTTCATAGAGGTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ALTVFLSKVSEPIITLHLALHCQ*LHRGPF Trigger: GAAAGGACCTCTATGAAGCCATTGACAGTGAAGGGC...CAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CCA 90 bp | AACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGAAGGAGCCCTTCACTGTCAATaGCTTCATAGAGGTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: NSLSFKGVGAYNNTPPEGALHCQ*LHRGPF Trigger: GAAAGGACCTCTATGAAGCCATTGACAGTGAAGGGC...TCCTTCAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR TCA 90 bp | TGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGTAAGCCACACAAAGTaGAAGGGTTACCAATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: CTNSLSFKGVGAYNNTPPVSHTK*KGYQSK Trigger: TTTGGATTGGTAACCCTTTCACTTTGTGTGGCTTAC...AGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR TCA 90 bp | GAACAAGAAACAATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCGTAAGCCACACAAAGTaGAAGGGTTACCAATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: EQETILCTNSLSFKGVGAVSHTK*KGYQSK Trigger: TTTGGATTGGTAACCCTTTCACTTTGTGTGGCTTAC...GGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAATTGTTTCTTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR TCA 90 bp | AACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGAAGGAGTAAGCCACACAAAGTaGAAGGGTTACCAATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: NSLSFKGVGAYNNTPPEGVSHTK*KGYQSK Trigger: TTTGGATTGGTAACCCTTTCACTTTGTGTGGCTTAC...TCCTTCAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR TCA 90 bp | TGGAACAAGAAACAATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGGTAAGCCACACAAAGTaGAAGGGTTACCAATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: WNKKQFCALTVFLSKVSEVSHTK*KGYQSK Trigger: TTTGGATTGGTAACCCTTTCACTTTGTGTGGCTTAC...CTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAATTGTTTCTTGTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR GCA 90 bp | GCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGTCTGTTCTCTTGAGTTaGATGCAGATAACCAATGTA | + |
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Preference number: 4 (lower is better) Translates to: ALTVFLSKVSEPIITLHLSVLLS*MQITNV Trigger: TACATTGGTTATCTGCATGCAACTCAAGAGAACAGA...CAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CCA 90 bp | TCAGCTGTAATGAGACTAAACTCACCACAGTGGACTGCTTTCAATTTTATATTCGCCCTTCACTGTCAATaGCTTCATAGAGGTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SAVMRLNSPQWTAFNFIFALHCQ*LHRGPF Trigger: GAAAGGACCTCTATGAAGCCATTGACAGTGAAGGGC...GAATATAAAATTGAAAGCAGTCCACTGTGGTGAGTTTAGTCTCATTACAGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | TGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTCTCGAAATAAGGTGGTaGTGTGCGCCCCTCGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: CTNSLSFKGVGAYNNTPPLEIRW*CAPLGG Trigger: GCCTCCGAGGGGCGCACACAACCACCTTATTTCGAG...AGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | AACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGAAGGACTCGAAATAAGGTGGTaGTGTGCGCCCCTCGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: NSLSFKGVGAYNNTPPEGLEIRW*CAPLGG Trigger: GCCTCCGAGGGGCGCACACAACCACCTTATTTCGAG...TCCTTCAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | GAACAAGAAACAATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCCTCGAAATAAGGTGGTaGTGTGCGCCCCTCGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: EQETILCTNSLSFKGVGALEIRW*CAPLGG Trigger: GCCTCCGAGGGGCGCACACAACCACCTTATTTCGAG...GGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAATTGTTTCTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | TGGAACAAGAAACAATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCTCGAAATAAGGTGGTaGTGTGCGCCCCTCGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: WNKKQFCALTVFLSKVSELEIRW*CAPLGG Trigger: GCCTCCGAGGGGCGCACACAACCACCTTATTTCGAG...CTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAATTGTTTCTTGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | GCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGGCCATCACAGGTTTGTaGGGTTTAATGAAGAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: ALTVFLSKVSEPIITLHLAITGL*GLMKSS Trigger: CGAGCTCTTCATTAAACCCAACAAACCTGTGATGGC...CAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | GCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTGGTCCTTTCTGTTCTCTaGAGTTGCATGCAGATAACC | + |
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Preference number: 5 (lower is better) Translates to: ALTVFLSKVSEPIITLHLVLSVL*SCMQIT Trigger: GGTTATCTGCATGCAACTCAAGAGAACAGAAAGGAC...CAGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | TGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTCCACCTTTCTGTTCTCTTGAGTaGCATGCAGATAACCAATGT | + |
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Preference number: 5 (lower is better) Translates to: CTNSLSFKGVGAYNNTPPFCSLE*HADNQC Trigger: ACATTGGTTATCTGCATGCAACTCAAGAGAACAGAA...AGGTGGAGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | TCAGCTGTAATGAGACTAAACTCACCACAGTGGACTGCTTTCAATTTTATATTCGTCCTTTCTGTTCTCTaGAGTTGCATGCAGATAACC | + |
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Preference number: 5 (lower is better) Translates to: SAVMRLNSPQWTAFNFIFVLSVL*SCMQIT Trigger: GGTTATCTGCATGCAACTCAAGAGAACAGAAAGGAC...GAATATAAAATTGAAAGCAGTCCACTGTGGTGAGTTTAGTCTCATTACAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGTGCACTAACAGTCTTTCTTTCAAAGGTGTCGGAGCCTATAATAACACTTTCTGTTCTCTTGAGTaGCATGCAGATAACCAATGT | + |
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Preference number: 5 (lower is better) Translates to: ILCTNSLSFKGVGAYNNTFCSLE*HADNQC Trigger: ACATTGGTTATCTGCATGCAACTCAAGAGAACAGAA...AGTGTTATTATAGGCTCCGACACCTTTGAAAGAAAGACTGTTAGTGCACAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | CTAAACTCACCACAGTGGACTGCTTTCAATTTTATATTCTCCCTTGTTAACATAGTCCTTTCTGTTCTCTaGAGTTGCATGCAGATAACC | + |
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Preference number: 5 (lower is better) Translates to: LNSPQWTAFNFIFSLVNIVLSVL*SCMQIT Trigger: GGTTATCTGCATGCAACTCAAGAGAACAGAAAGGAC...TATGTTAACAAGGGAGAATATAAAATTGAAAGCAGTCCACTGTGGTGAGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS-3UTR CAA 90 bp | CTAAACTCACCACAGTGGACTGCTTTCAATTTTATATTCTCCCTTGTTAACATATTCTGTTCTCTTGAGTaGCATGCAGATAACCAATGT | + |
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Preference number: 5 (lower is better) Translates to: LNSPQWTAFNFIFSLVNIFCSLE*HADNQC Trigger: ACATTGGTTATCTGCATGCAACTCAAGAGAACAGAA...TATGTTAACAAGGGAGAATATAAAATTGAAAGCAGTCCACTGTGGTGAGTTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS CCA 72 bp | TTTTTCTCCTCATGTACCGATGCCCTTCACTGTCAATaGCTTCATAGAGGTCCTTTCTGTTCTCTTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FFSSCTDALHCQ*LHRGPFCSLEL Trigger: CAACTCAAGAGAACAGAAAGGACCTCTATGAAGCCATTGACAGTGAAGGGCATCGGTACATGAGGAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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| CDS CAA 90 bp | CTTCACTGTCAATGGCTTCATAGAGGTCCTTTCTGTTCTCTTGAGTaGCATGCAGATAACCAATGTAAGCCACACAAAGTGAAAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LHCQWLHRGPFCSLE*HADNQCKPHKVKGL Trigger: TAACCCTTTCACTTTGTGTGGCTTACATTGGTTATCTGCATGCAACTCAAGAGAACAGAAAGGACCTCTATGAAGCCATTGACAGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029972.4 ENSMUST00000108131.8 ENSMUST00000108132.8 ENSMUST00000108133.10 ENSMUST00000108134.8 |
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