Pregenerated sensors for SMIM20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061461Ensembl transcript IDs: ENSMUST00000147148.5, ENSMUST00000204218.3, ENSMUST00000204465.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAGGAGCAGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTCTaGTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATGGTG | + |
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Preference number: 1 (lower is better) Translates to: CRSSRSSTNSLAGWL*SCKVNGAARHFLMV Trigger: CACCATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 90 bp | GAAACATCCTCCAAGAGCCCTGCGAGGCAGCTTGGCAAGGCCATTTaGACTGAAATCGCTTATTCAGAAGGTGTCAGAGCAGCCACGGAC | + |
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Preference number: 1 (lower is better) Translates to: ETSSKSPARQLGKAI*TEIAYSEGVRAATD Trigger: GTCCGTGGCTGCTCTGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCTTGGAGGATGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 90 bp | AAAGACTGCAGGAGCAGCAGATCTTCCACAAACAGCCTTGCAGGCTaGCTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: KDCRSSRSSTNSLAG*LCSCKVNGAARHFL Trigger: TAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCTGCAGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 90 bp | TTCCACAAACAGCCTTGCAGGCTGGCTCTGCTCCTGCAAAGTCAATaGAGCCGCAAGGCACTTCCTAATGGTGGCATCTGTTCAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: FHKQPCRLALLLQSQ*SRKALPNGGICSGS Trigger: AGAACCTGAACAGATGCCACCATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 90 bp | AATCGCCAAGCTTCAGCCTCAGCTAATATTCCCCGGGGGCTGGGCTaGCCCTCTTCCATCTTCAAGATGATTCAGGTTTCCTGGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: NRQASASANIPRGLG*PSSIFKMIQVSWRT Trigger: TGTTCTCCAGGAAACCTGAATCATCTTGAAGATGGAAGAGGGCCAGCCCAGCCCCCGGGGAATATTAGCTGAGGCTGAAGCTTGGCGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR GCA 90 bp | CACAGGTTGCTTGTGTTCACATCACAGCTTGGAAGTGATAAAGACTaGAGGAGCAGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: HRLLVFTSQLGSDKD*RSSRSSTNSLAGWL Trigger: GAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCTGCAGTCTTTATCACTTCCAAGCTGTGATGTGAACACAAGCAACCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 90 bp | CATTTCCTGCCAAATGGATCAGACCACACTTTCAACCCTGGCGGTTaGACATCTTCCTGGACAATACCAGCTCGATTTACAGCCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: HFLPNGSDHTFNPGG*TSSWTIPARFTACS Trigger: GGAGCAGGCTGTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 90 bp | CCACTTTCCTCATCAGACTTGCTGACAGCCTCATTTCCTGCCAAATaGATCAGACCACACTTTCAACCCTGGCGGTTGCACATCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLSSSDLLTASFPAK*IRPHFQPWRLHIFL Trigger: CAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGGCTGTCAGCAAGTCTGATGAGGAAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 90 bp | TATTCAGAAGGTGTCAGAGCAGCCACGGACCTTGAGCCCACAGGTTaGTTGTGTTCACATCACAGCTTGGAAGTGATAAAGACTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: YSEGVRAATDLEPTG*LCSHHSLEVIKTAG Trigger: TCCTGCAGTCTTTATCACTTCCAAGCTGTGATGTGAACACAAGCAACCTGTGGGCTCAAGGTCCGTGGCTGCTCTGACACCTTCTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 90 bp | AAGACGTCCACTTTCCTCATCAGACTTGCTGACAGCCTCATTTCCTaGCAAATGGATCAGACCACACTTTCAACCCTGGCGGTTGCACAT | + |
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Preference number: 1 (lower is better) Translates to: KTSTFLIRLADSLIS*QMDQTTLSTLAVAH Trigger: ATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGGCTGTCAGCAAGTCTGATGAGGAAAGTGGACGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 90 bp | AATGGATCAGACCACACTTTCAACCCTGGCGGTTGCACATCTTCCTaGACAATACCAGCTCGATTTACAGCCTGCTCCTTCTATGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: NGSDHTFNPGGCTSS*TIPARFTACSFYEA Trigger: AGCCTCATAGAAGGAGCAGGCTGTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR CCA 90 bp | ACAGCCTCATTTCCTGCCAAATGGATCAGACCACACTTTCAACCCTaGCGGTTGCACATCTTCCTGGACAATACCAGCTCGATTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: TASFPAKWIRPHFQP*RLHIFLDNTSSIYS Trigger: GCTGTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR TCA 90 bp | CGGAGTGCACAGGATAAAGACGTCCACTTTCCTCATCAGACTTGCTaGCAGCCTCATTTCCTGCCAAATGGATCAGACCACACTTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: RSAQDKDVHFPHQTC*QPHFLPNGSDHTFN Trigger: GTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGGCTGTCAGCAAGTCTGATGAGGAAAGTGGACGTCTTTATCCTGTGCACTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 90 bp | AATGGATCAGACCACACTTTCAACCCTGGCGGTTGCACATCTTCCTaGACAATACCAGCTCGATTTACAGCCTGCTCCTTCTCATTGTCA | + |
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Preference number: 1 (lower is better) Translates to: NGSDHTFNPGGCTSS*TIPARFTACSFSLS Trigger: TGACAATGAGAAGGAGCAGGCTGTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204465.2 |
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| 3UTR TCA 90 bp | CCCTCTTCCATCTTCAAGATGATTCAGGTTTCCTGGAGAACAAAATaGTCCTCTAATGCCTCATCTCTCCTCGCTGACAGATGGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: PSSIFKMIQVSWRTK*SSNASSLLADRWFQ Trigger: CTGAAACCATCTGTCAGCGAGGAGAGATGAGGCATTAGAGGATCATTTTGTTCTCCAGGAAACCTGAATCATCTTGAAGATGGAAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR CCA 90 bp | CATCCTCCAAGAGCCCTGCGAGGCAGCTTGGCAAGGCCATTTGCACTGAAATCGATATTCCCCGGGGGCTaGGCTGGCCCTCTTCCATCT | + |
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Preference number: 2 (lower is better) Translates to: HPPRALRGSLARPFALKSIFPGG*AGPLPS Trigger: AGATGGAAGAGGGCCAGCCCAGCCCCCGGGGAATAT...CGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCTTGGAGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR CCA 90 bp | CAAATGGATCAGACCACACTTTCAACCCTGGCGGTTGCACATCTTCCTGGACAACCCCGGGGGCTGGGCTaGCCCTCTTCCATCTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: QMDQTTLSTLAVAHLPGQPRGLG*PSSIFK Trigger: CTTGAAGATGGAAGAGGGCCAGCCCAGCCCCCGGGG...TTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTCTGCTCCTGCAAAGTCAAGTCTGGCTAGCAGCATaGGAGTTCCCTCTCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: QQIFHKQPCRLALLLQSQVWLAA*EFPLHA Trigger: GGCATGGAGAGGGAACTCTCATGCTGCTAGCCAGAC...TTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAGGTGTCAGAGCAGCCACGGACCTTGAGCCCACAGGTTGCTTGTGTTCATTCCACAAACAGCCTTaGAGGCTGGCTCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SEGVRAATDLEPTGCLCSFHKQP*RLALLL Trigger: CAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAA...TGAACACAAGCAACCTGTGGGCTCAAGGTCCGTGGCTGCTCTGACACCTTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | CATGAGAGTTCCCTCTCCATGCCATGCTGCCACAGTGAGGCATCTATTGTCCCCTTCCACAAACAGCCTTaGAGGCTGGCTCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HESSLSMPCCHSEASIVPFHKQP*RLALLL Trigger: CAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAA...GGGGACAATAGATGCCTCACTGTGGCAGCATGGCATGGAGAGGGAACTCTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CAA 90 bp | GAAGTGATAAAGACTGCAGGAGCAGCAGATCTTCCACAAACAGCCTaGCAGGCTGGCTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: EVIKTAGAADLPQTA*QAGSAPAKSMEPQG Trigger: GCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCTGCAGTCTTTATCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATGGTGGCATCTGTCTTGCAGGCTGGCTCTaGTCCTGCAAAGTCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: LLLQSQWSRKALPNGGICLAGWL*SCKVNG Trigger: TCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAG...ACAGATGCCACCATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGCTTGTGTTCACATCACAGCTTGGAAGTGATAAAGACTGCAGGAGCAGCGTCTGGCTAGCAGCATaGGAGTTCCCTCTCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: RLLVFTSQLGSDKDCRSSVWLAA*EFPLHA Trigger: GGCATGGAGAGGGAACTCTCATGCTGCTAGCCAGAC...GCTGCTCCTGCAGTCTTTATCACTTCCAAGCTGTGATGTGAACACAAGCAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGCTGGCTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATCTCATCTCTCCTCGCTaGCAGATGGTTTCAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: CRLALLLQSQWSRKALPNLISPR*QMVSDV Trigger: TACATCTGAAACCATCTGTCAGCGAGGAGAGATGAG...ATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGCTTGTGTTCACATCACAGCTTGGAAGTGATAAAGACTGCAGGAGCAGCGGCTGGCTCTGCTCCTaGAAAGTCAATGGAGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: RLLVFTSQLGSDKDCRSSGWLCS*KVNGAA Trigger: TGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCC...GCTGCTCCTGCAGTCTTTATCACTTCCAAGCTGTGATGTGAACACAAGCAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGGCAGCTTGGCAAGGCCATTTGCACTGAAATCGCTTATTCAGAAGGTGTCATTCCACAAACAGCCTTaGAGGCTGGCTCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RGSLARPFALKSLIQKVSFHKQP*RLALLL Trigger: CAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAA...TGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCACAAACAGCCTTGCAGGCTGGCTCTGCTCCTGCAAAGTCAATGGAGCCGGAAGTGATAAAGACTaGAGGAGCAGCAGATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSTNSLAGWLCSCKVNGAGSDKD*RSSRSS Trigger: GGAAGATCTGCTGCTCCTGCAGTCTTTATCACTTCC...GGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATGGTGGCATCTAGTGCTAATCCTTGCTaGGGTATAGGTCTCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LCSCKVNGAARHFLMVASSANPC*GIGLQE Trigger: TTCCTGGAGACCTATACCTCAGCAAGGATTAGCACT...AGATGCCACCATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGACTGCAGGAGCAGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTCTCTCTCCATGCCATGCTaGCACAGTGAGGCATCTATT | + |
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Preference number: 2 (lower is better) Translates to: IKTAGAADLPQTALQAGSLSMPC*HSEASI Trigger: AATAGATGCCTCACTGTGGCAGCATGGCATGGAGAG...AGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCTGCAGTCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCCCTGCGAGGCAGCTTGGCAAGGCCATTTGCACTGAAATCGCTTATTCACTCTCCATGCCATGCTaGCACAGTGAGGCATCTATT | + |
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Preference number: 2 (lower is better) Translates to: KSPARQLGKAICTEIAYSLSMPC*HSEASI Trigger: AATAGATGCCTCACTGTGGCAGCATGGCATGGAGAG...TGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTCCTAATGGTGGCATCTGTTCAGGTTCTCCAGGGAGTTAAGGGAAGCACTCTTGCAGGCTGGCTCTaGTCCTGCAAAGTCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: HFLMVASVQVLQGVKGSTLAGWL*SCKVNG Trigger: TCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAG...AGTGCTTCCCTTAACTCCCTGGAGAACCTGAACAGATGCCACCATTAGGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCCTGCGAGGCAGCTTGGCAAGGCCATTTGCACTGAAATCGCTTATTCAGGGAAGTGATAAAGACTaGAGGAGCAGCAGATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RALRGSLARPFALKSLIQGSDKD*RSSRSS Trigger: GGAAGATCTGCTGCTCCTGCAGTCTTTATCACTTCC...CTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CAA 90 bp | TCATTTCCTGCCAAATGGATCAGACCACACTTTCAACCCTGGCGGTaGCACATCTTCCTGGACAATACCAGCTCGATTTACAGCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SFPAKWIRPHFQPWR*HIFLDNTSSIYSLL Trigger: GAGCAGGCTGTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATGGTGGCATCTGTCAAGGCCATTTGCACTaGAATCGCTTATTCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLQSQWSRKALPNGGICQGHLH*NRLFRR Trigger: CCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTG...ACAGATGCCACCATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCCACAAACAGCCTTGCAGGCTGGCTCTGCTCCTGCAAAGTCAATGGAGCGGGAAGCACTGTCTTTaGACACAGTCTCTATCACAA | + |
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Preference number: 2 (lower is better) Translates to: IFHKQPCRLALLLQSQWSGKHCL*TQSLSQ Trigger: TTGTGATAGAGACTGTGTGCAAAGACAGTGCTTCCC...GCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCTTGTGTTCACATCACAGCTTGGAAGTGATAAAGACTGCAGGAGCAGCACTTGCAGGCTGGCTCTaGTCCTGCAAAGTCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: GCLCSHHSLEVIKTAGAALAGWL*SCKVNG Trigger: TCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAG...TGCTGCTCCTGCAGTCTTTATCACTTCCAAGCTGTGATGTGAACACAAGCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTCTGCTCCTGCAAAGTCAAGCTCGATTTACAGCCTaGTCCTTCTCATTGTCATGT | + |
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Preference number: 2 (lower is better) Translates to: QQIFHKQPCRLALLLQSQARFTA*SFSLSC Trigger: ACATGACAATGAGAAGGAGCAGGCTGTAAATCGAGC...TTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTGGCAAGGCCATTTGCACTGAAATCGCTTATTCAGAAGGTGTCAGAGCACTCTCCATGCCATGCTaGCACAGTGAGGCATCTATT | + |
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Preference number: 2 (lower is better) Translates to: QLGKAICTEIAYSEGVRALSMPC*HSEASI Trigger: AATAGATGCCTCACTGTGGCAGCATGGCATGGAGAG...TGCTCTGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGGTTCTCCAGGGAGTTAAGGGAAGCACTGTCTTTGCACACAGTCTCTATCTTGAGCCCACAGGTTaGTTGTGTTCACATCACAGC | + |
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Preference number: 2 (lower is better) Translates to: VQVLQGVKGSTVFAHSLYLEPTG*LCSHHS Trigger: GCTGTGATGTGAACACAAGCAACCTGTGGGCTCAAG...ATAGAGACTGTGTGCAAAGACAGTGCTTCCCTTAACTCCCTGGAGAACCTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTGGCAAGGCCATTTGCACTGAAATCGCTTATTCAGAAGGTGTCAGAGCACTTGAGCCCACAGGTTaGTTGTGTTCACATCACAGC | + |
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Preference number: 2 (lower is better) Translates to: QLGKAICTEIAYSEGVRALEPTG*LCSHHS Trigger: GCTGTGATGTGAACACAAGCAACCTGTGGGCTCAAG...TGCTCTGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CAA 90 bp | CAGTTTTATCAACTGAAACATCCTCCAAGAGCCCTGCGAGGCAGCTaGGCAAGGCCATTTGCACTGAAATCGCTTATTCAGAAGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QFYQLKHPPRALRGS*ARPFALKSLIQKVS Trigger: TGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCTTGGAGGATGTTTCAGTTGATAAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAGTGCCAAGGATCCTGTCTTCAAACAGTTTTATCAACTGAAACATCCTCCGTCTGGCTAGCAGCATaGGAGTTCCCTCTCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: KQCQGSCLQTVLSTETSSVWLAA*EFPLHA Trigger: GGCATGGAGAGGGAACTCTCATGCTGCTAGCCAGAC...GGAGGATGTTTCAGTTGATAAAACTGTTTGAAGACAGGATCCTTGGCACTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCTCATTTCCTGCCAAATGGATCAGACCACACTTTCAACCCTGGCGGTTGCTCCTCGCTGACAGATaGTTTCAGATGTATCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: TASFPAKWIRPHFQPWRLLLADR*FQMYQS Trigger: ACTTTGATACATCTGAAACCATCTGTCAGCGAGGAG...CAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGGCAAGGCCATTTGCACTGAAATCGCTTATTCAGAAGGTGTCAGAGCAGGGGAAGCACTGTCTTTaGACACAGTCTCTATCACAA | + |
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Preference number: 2 (lower is better) Translates to: SLARPFALKSLIQKVSEQGKHCL*TQSLSQ Trigger: TTGTGATAGAGACTGTGTGCAAAGACAGTGCTTCCC...CTGCTCTGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGGTTCTCCAGGGAGTTAAGGGAAGCACTGTCTTTGCACACAGTCTCTATTCCTGGAGAACAAAATaGTCCTCTAATGCCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: VQVLQGVKGSTVFAHSLYSWRTK*SSNASS Trigger: AGATGAGGCATTAGAGGATCATTTTGTTCTCCAGGA...ATAGAGACTGTGTGCAAAGACAGTGCTTCCCTTAACTCCCTGGAGAACCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGACTGCAGGAGCAGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTCTTATATTCTTAAACAGTaGCAAGGATCCTGTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: IKTAGAADLPQTALQAGSYILKQ*QGSCLQ Trigger: TTGAAGACAGGATCCTTGGCACTGTTTAAGAATATA...AGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCTGCAGTCTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTGGAAGTGATAAAGACTGCAGGAGCAGCAGATCTTCCACAAACAGCCTTATGATAGGACCTGAATaGTTAAGGAGGAAAATGACT | + |
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Preference number: 2 (lower is better) Translates to: QLGSDKDCRSSRSSTNSLMIGPE*LRRKMT Trigger: AGTCATTTTCCTCCTTAATCATTCAGGTCCTATCAT...AAGGCTGTTTGTGGAAGATCTGCTGCTCCTGCAGTCTTTATCACTTCCAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR CAA 90 bp | AGAGCAGCCACGGACCTTGAGCCCACAGGTTGCTTGTGTTCACATCACAGCTTGGCCCTGCGAGGCAGCTaGGCAAGGCCATTTGCACTG | + |
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Preference number: 3 (lower is better) Translates to: RAATDLEPTGCLCSHHSLALRGS*ARPFAL Trigger: CAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGC...CAAGCTGTGATGTGAACACAAGCAACCTGTGGGCTCAAGGTCCGTGGCTGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR CAA 90 bp | CATGAGAGTTCCCTCTCCATGCCATGCTGCCACAGTGAGGCATCTATTGTCCCCGCCCTGCGAGGCAGCTaGGCAAGGCCATTTGCACTG | + |
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Preference number: 3 (lower is better) Translates to: HESSLSMPCCHSEASIVPALRGS*ARPFAL Trigger: CAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGC...GGGGACAATAGATGCCTCACTGTGGCAGCATGGCATGGAGAGGGAACTCTCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGAGCAGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTCTGCTCCTGCAACTTCCACAAACAGCCTaGCAGGCTGGCTCTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QEQQIFHKQPCRLALLLQLPQTA*QAGSAP Trigger: AGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAG...TTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 72 bp | AGGAGCAGCAGATCTTCCACAAACAGCCTTGCAGGCTaGCTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: RSSRSSTNSLAG*LCSCKVNGAAR Trigger: CCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCTGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR TCA 72 bp | GAGCCCTGCGAGGCAGCTTGGCAAGGCCATTTGCACTaGAATCGCTTATTCAGAAGGTGTCAGAGCAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: EPCEAAWQGHLH*NRLFRRCQSSH Trigger: GTGGCTGCTCTGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 72 bp | AGCAGATCTTCCACAAACAGCCTTGCAGGCTGGCTCTaGTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTC | + |
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Preference number: 3 (lower is better) Translates to: SRSSTNSLAGWL*SCKVNGAARHF Trigger: GAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAGGCTGTTTGTGGAAGATCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 72 bp | GCTTCAGCCTCAGCTAATATTCCCCGGGGGCTGGGCTaGCCCTCTTCCATCTTCAAGATGATTCAGGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: ASASANIPRGLG*PSSIFKMIQVS Trigger: GGAAACCTGAATCATCTTGAAGATGGAAGAGGGCCAGCCCAGCCCCCGGGGAATATTAGCTGAGGCTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| 3UTR-3UTR CAA 90 bp | GCCAAATGGATCAGACCACACTTTCAACCCTGGCGGTTGCACATCTTCCTGGACACAGTGAGGCATCTATaGTCCCCACTGCGGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: AKWIRPHFQPWRLHIFLDTVRHL*SPLRSA Trigger: TGCACTCCGCAGTGGGGACAATAGATGCCTCACTGT...GTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATGGTGGCATCTACAGTGAGGCATCTATaGTCCCCACTGCGGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LCSCKVNGAARHFLMVASTVRHL*SPLRSA Trigger: TGCACTCCGCAGTGGGGACAATAGATGCCTCACTGT...AGATGCCACCATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGAAGGTGTCAGAGCAGCCACGGACCTTGAGCCCACAGGTTGCTTGTGTTGAGCCCACAGGTTGCTaGTGTTCACATCACAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: IQKVSEQPRTLSPQVACVEPTGC*CSHHSL Trigger: CAAGCTGTGATGTGAACACAAGCAACCTGTGGGCTC...AACACAAGCAACCTGTGGGCTCAAGGTCCGTGGCTGCTCTGACACCTTCTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 72 bp | TCCAAGAGCCCTGCGAGGCAGCTTGGCAAGGCCATTTaGACTGAAATCGCTTATTCAGAAGGTGTCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SKSPARQLGKAI*TEIAYSEGVRA Trigger: TGCTCTGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAGCCGCAAGGCACTTCCTAATGGTGGCATCTGTTCAGGTTCTCCAGGGAGTAGGGAAGCACTGTCTTaGCACACAGTCTCTATCACA | + |
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Preference number: 3 (lower is better) Translates to: WSRKALPNGGICSGSPGSREALS*HTVSIT Trigger: TGTGATAGAGACTGTGTGCAAAGACAGTGCTTCCCT...ACTCCCTGGAGAACCTGAACAGATGCCACCATTAGGAAGTGCCTTGCGGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR-3UTR CAA 90 bp | TCACAGCTTGGAAGTGATAAAGACTGCAGGAGCAGCAGATCTTCCACAAACAGCACAGTGAGGCATCTATaGTCCCCACTGCGGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SQLGSDKDCRSSRSSTNSTVRHL*SPLRSA Trigger: TGCACTCCGCAGTGGGGACAATAGATGCCTCACTGT...GCTGTTTGTGGAAGATCTGCTGCTCCTGCAGTCTTTATCACTTCCAAGCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 72 bp | TTTCCTGCCAAATGGATCAGACCACACTTTCAACCCTaGCGGTTGCACATCTTCCTGGACAATACCAGCTCG | + |
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Preference number: 3 (lower is better) Translates to: FPAKWIRPHFQP*RLHIFLDNTSS Trigger: CGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CCA 72 bp | TCATCAGACTTGCTGACAGCCTCATTTCCTGCCAAATaGATCAGACCACACTTTCAACCCTGGCGGTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SSDLLTASFPAK*IRPHFQPWRLH Trigger: GTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGGCTGTCAGCAAGTCTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR TCA 72 bp | GTGCCAAGGATCCTGTCTTCAAACAGTTTTATCAACTaGAACATCCTCCAAGAGCCCTGCGAGGCAGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: VPRILSSNSFIN*NILQEPCEAAW Trigger: CCAAGCTGCCTCGCAGGGCTCTTGGAGGATGTTTCAGTTGATAAAACTGTTTGAAGACAGGATCCTTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR TCA 72 bp | CACGCAGGAGTCTACTGTGTGTGGTATAGTCTAGTGTaGCTCGCTCCCTATTCACTTCCACACACAGTGACT | + |
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Preference number: 3 (lower is better) Translates to: HAGVYCVWYSLV*LAPYSLPHTVT Trigger: AGTCACTGTGTGTGGAAGTGAATAGGGAGCGAGTCACACTAGACTATACCACACACAGTAGACTCCTGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 72 bp | ACTTTCCTCATCAGACTTGCTGACAGCCTCATTTCCTaGCAAATGGATCAGACCACACTTTCAACCCTGGCG | + |
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Preference number: 3 (lower is better) Translates to: TFLIRLADSLIS*QMDQTTLSTLA Trigger: CGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGAGGCTGTCAGCAAGTCTGATGAGGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR TCA 72 bp | CAGGATAAAGACGTCCACTTTCCTCATCAGACTTGCTaGCAGCCTCATTTCCTGCCAAATGGATCAGACCAC | + |
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Preference number: 3 (lower is better) Translates to: QDKDVHFPHQTC*QPHFLPNGSDH Trigger: GTGGTCTGATCCATTTGGCAGGAAATGAGGCTGTCAGCAAGTCTGATGAGGAAAGTGGACGTCTTTATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR GCA 72 bp | CCAAATGGATCAGACCACACTTTCAACCCTGGCGGTTaGACATCTTCCTGGACAATACCAGCTCGATTTACA | + |
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Preference number: 3 (lower is better) Translates to: PNGSDHTFNPGG*TSSWTIPARFT Trigger: TGTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR TCA 72 bp | AGATGGTTTCAGATGTATCAAAGTGCTAATCCTTGCTaGGGTATAGGTCTCCAGGAAGGAGTGTGGCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: RWFQMYQSANPC*GIGLQEGVWLL Trigger: TAAAAGCCACACTCCTTCCTGGAGACCTATACCTCAGCAAGGATTAGCACTTTGATACATCTGAAACCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204218.3 |
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| CDS-3UTR CCA 90 bp | CTTGCAGGCTGGCTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAGGGGCCGGAAGTAGATaGGATAGAAGGCGGCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LAGWLCSCKVNGAARHFLGAGSR*DRRRRR Trigger: TCGGCGCCGCCTTCTATCCCATCTACTTCCGGCCCC...TAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATGGTGGCATCGGGGCCGGAAGTAGATaGGATAGAAGGCGGCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ALLLQSQWSRKALPNGGIGAGSR*DRRRRR Trigger: TCGGCGCCGCCTTCTATCCCATCTACTTCCGGCCCC...GATGCCACCATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| CDS-3UTR CCA 90 bp | GGATCAGACCACACTTTCAACCCTGGCGGTTGCACATCTTCCTGGACAATACCAGGGGCCGGAAGTAGATaGGATAGAAGGCGGCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSDHTFNPGGCTSSWTIPGAGSR*DRRRRR Trigger: TCGGCGCCGCCTTCTATCCCATCTACTTCCGGCCCC...TGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CAA 72 bp | CCCTCTCCATGCCATGCTGCCACAGTGAGGCATCTATaGTCCCCACTGCGGAGTGCACAGGATAAAGACGTC | + |
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Preference number: 4 (lower is better) Translates to: PSPCHAATVRHL*SPLRSAQDKDV Trigger: GACGTCTTTATCCTGTGCACTCCGCAGTGGGGACAATAGATGCCTCACTGTGGCAGCATGGCATGGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| CDS-3UTR CCA 90 bp | AGAGCCCTGCGAGGCAGCTTGGCAAGGCCATTTGCACTGAAATCGCTTATTCAGACAGCCTGCTCCTTCTaGTATTCCTCCAGCCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RALRGSLARPFALKSLIQTACSF*YSSSRI Trigger: TATGCGGCTGGAGGAATACCAGAAGGAGCAGGCTGT...CTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147148.5 |
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| 3UTR CAA 72 bp | GTCAGAGCAGCCACGGACCTTGAGCCCACAGGTTGCTaGTGTTCACATCACAGCTTGGAAGTGATAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VRAATDLEPTGC*CSHHSLEVIKT Trigger: AGTCTTTATCACTTCCAAGCTGTGATGTGAACACAAGCAACCTGTGGGCTCAAGGTCCGTGGCTGCTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| 3UTR CAA 72 bp | CAACTGAAACATCCTCCAAGAGCCCTGCGAGGCAGCTaGGCAAGGCCATTTGCACTGAAATCGCTTATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLKHPPRALRGS*ARPFALKSLIQ Trigger: CTGAATAAGCGATTTCAGTGCAAATGGCCTTGCCAAGCTGCCTCGCAGGGCTCTTGGAGGATGTTTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGCCATTTGCACTGAAATCGCTTATTCAGAAGGTGTCAGAGCAGCCACGGTTCAACCCTGGCGGTTaGACATCTTCCTGGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: ARPFALKSLIQKVSEQPRFNPGG*TSSWTI Trigger: TATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAA...CCGTGGCTGCTCTGACACCTTCTGAATAAGCGATTTCAGTGCAAATGGCCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147148.5 |
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| 3UTR CAA 72 bp | GCCAAATGGATCAGACCACACTTTCAACCCTGGCGGTaGCACATCTTCCTGGACAATACCAGCTCGATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AKWIRPHFQPWR*HIFLDNTSSIY Trigger: GTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGCTGGCTCTGCTCCTGCAAAGTCAATGGAGCCGCAAGGCACTTCCTAATTCATTTCCTGCCAAATaGATCAGACCACACTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRLALLLQSQWSRKALPNSFPAK*IRPHFQ Trigger: TTGAAAGTGTGGTCTGATCCATTTGGCAGGAAATGA...ATTAGGAAGTGCCTTGCGGCTCCATTGACTTTGCAGGAGCAGAGCCAGCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147148.5 |
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| 3UTR CAA 72 bp | CTTGAGCCCACAGGTTGCTTGTGTTCACATCACAGCTaGGAAGTGATAAAGACTGCAGGAGCAGCAGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LEPTGCLCSHHS*EVIKTAGAADL Trigger: AAGATCTGCTGCTCCTGCAGTCTTTATCACTTCCAAGCTGTGATGTGAACACAAGCAACCTGTGGGCTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147148.5 ENSMUST00000204218.3 ENSMUST00000204465.2 |
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| CDS CCA 90 bp | AATGGATCAGACCACACTTTCAACCCTGGCGGTTGCACATCTTCCTaGACAATACCAGCTCGATTTACAGCCTGCTCCTTCTGGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: NGSDHTFNPGGCTSS*TIPARFTACSFWYS Trigger: GGAATACCAGAAGGAGCAGGCTGTAAATCGAGCTGGTATTGTCCAGGAAGATGTGCAACCGCCAGGGTTGAAAGTGTGGTCTGATCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147148.5 |
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| CDS GCA 72 bp | ACATCTTCCTGGACAATACCAGCTCGATTTACAGCCTaGTCCTTCTGGTATTCCTCCAGCCGCATAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSWTIPARFTA*SFWYSSSRIRG Trigger: GCCCCTTATGCGGCTGGAGGAATACCAGAAGGAGCAGGCTGTAAATCGAGCTGGTATTGTCCAGGAAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147148.5 |
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