Pregenerated sensors for SMIM15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071180Ensembl transcript IDs: ENSMUST00000095458.6, ENSMUST00000223808.2, ENSMUST00000224361.2, ENSMUST00000224390.2, ENSMUST00000225972.2, ENSMUST00000226042.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCATCTGCACTGCTGGCTCTACAGCATGTTACTCTGCAACACATTaGAGCAAATGGCAGTGTTCAAAGTACAAAACCTATTCTATCCAG | + |
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Preference number: 1 (lower is better) Translates to: GICTAGSTACYSATH*SKWQCSKYKTYSIQ Trigger: CTGGATAGAATAGGTTTTGTACTTTGAACACTGCCATTTGCTTCAATGTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGTGCAGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR GCA 90 bp | TCACTGGAAGGTGCCCAGCTTGTACTGCCATTTTATTGCAGTCCCTaGAACCACTGTTATACCCATGAAATCATGTTCCCAAATTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: SLEGAQLVLPFYCSP*NHCYTHEIMFPNLN Trigger: GTTTAAATTTGGGAACATGATTTCATGGGTATAACAGTGGTTGCAGGGACTGCAATAAAATGGCAGTACAAGCTGGGCACCTTCCAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCCAGCTTGTACTGCCATTTTATTGCAGTCCCTGCAACCACTGTTATACCCAACCCATCCCGAAGTaGGCTGTGGGCTTTTCCGCT | + |
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Preference number: 2 (lower is better) Translates to: GAQLVLPFYCSPCNHCYTQPIPK*AVGFSA Trigger: AGCGGAAAAGCCCACAGCCCACTTCGGGATGGGTTG...GGTATAACAGTGGTTGCAGGGACTGCAATAAAATGGCAGTACAAGCTGGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACAAGGCATCTGCACTGCTGGCTCTACAGCATGTTACTCTGCAACACATGATGGGATCCAATTCTaGACACAAGGTCCGCTTATA | + |
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Preference number: 2 (lower is better) Translates to: PAQGICTAGSTACYSATHDGIQF*TQGPLI Trigger: TATAAGCGGACCTTGTGTTCAGAATTGGATCCCATC...ATGTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGTGCAGATGCCTTGTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGAGGATGGGATCCAATTCTGAACACAAGGTCCGCTTATATTTCTCATGGCAGAGTGGTTTTCTCTaGCTACAGTCTGTGCGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TLRMGSNSEHKVRLYFSWQSGFL*LQSVRP Trigger: GGGGCGCACAGACTGTAGCCAGAGAAAACCACTCTG...CCATGAGAAATATAAGCGGACCTTGTGTTCAGAATTGGATCCCATCCTCAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGCACAAGGCATCTGCACTGCTGGCTCTACAGCATGTTACTCTGCAACACACAGACAGAAATGCTTaGGGCTTGGAGTGTTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: HQHKASALLALQHVTLQHTDRNA*GLECFN Trigger: ATTAAAACACTCCAAGCCCCAAGCATTTCTGTCTGT...GTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGTGCAGATGCCTTGTGCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGCACAAGGCATCTGCACTGCTGGCTCTACAGCATGTTACTCTGCAACACAGTGCTTCTGAGCTTTaGATTTTCACATTAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: HQHKASALLALQHVTLQHSASEL*IFTLGM Trigger: CATACCTAATGTGAAAATTCAAAGCTCAGAAGCACT...GTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGTGCAGATGCCTTGTGCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCGCTCTTGGCATCATGTCTGAGCACAGGTGTTAGGTTTTACAGTGCTTCTGCAGGTTTTCCAGAGTaGTTTTCTCTGGCTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: FPLLASCLSTGVRFYSASAGFPE*FSLATV Trigger: GACTGTAGCCAGAGAAAACCACTCTGGAAAACCTGC...AGAAGCACTGTAAAACCTAACACCTGTGCTCAGACATGATGCCAAGAGCGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000095458.6 ENSMUST00000223808.2 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACAAGGCATCTGCACTGCTGGCTCTACAGCATGTTACTCTGCAACACATTATTTCATAATACCTTaGGGATGGGATCCAATTCTG | + |
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Preference number: 2 (lower is better) Translates to: PAQGICTAGSTACYSATHYFIIP*GWDPIL Trigger: CAGAATTGGATCCCATCCTCAAGGTATTATGAAATA...ATGTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGTGCAGATGCCTTGTGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGATGTATCAACCCATCCCGAAGTaGGCTGTGGGCTTTTCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SEHKVRLYFSWLEDNLMYQPIPK*AVGFSA Trigger: AGCGGAAAAGCCCACAGCCCACTTCGGGATGGGTTG...ATACATCAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCCAGCTTGTACTGCCATTTTATTGCAGTCCCTGCAACCACTGTTATACCACAGACAGAAATGCTTaGGGCTTGGAGTGTTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: GAQLVLPFYCSPCNHCYTTDRNA*GLECFN Trigger: ATTAAAACACTCCAAGCCCCAAGCATTTCTGTCTGT...GGTATAACAGTGGTTGCAGGGACTGCAATAAAATGGCAGTACAAGCTGGGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGATGTATCAGAGTGGTTTTCTCTaGCTACAGTCTGTGCGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SEHKVRLYFSWLEDNLMYQSGFL*LQSVRP Trigger: GGGGCGCACAGACTGTAGCCAGAGAAAACCACTCTG...ATACATCAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR CCA 90 bp | GAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGATGTATTTTCAGAGTGGTTTTCTCTaGCTACAGTCTGTGCGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EHKVRLYFSWLEDNLMYFQSGFL*LQSVRP Trigger: GGGGCGCACAGACTGTAGCCAGAGAAAACCACTCTG...AAAATACATCAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAATTCTGAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGTCTTGGCATCATGTCTaGGCACAGGTGTTAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SNSEHKVRLYFSWLEDNLSWHHV*AQVLGF Trigger: AAAACCTAACACCTGTGCTCAGACATGATGCCAAGA...CAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTCAGAATTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGATGTATGAGTCCTTCCAAAGCTaGAGGTTTTCCAGAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SEHKVRLYFSWLEDNLMYESFQS*RFSRVV Trigger: AACCACTCTGGAAAACCTGCAGCTTTGGAAGGACTC...ATACATCAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR CCA 90 bp | GAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGATGTATTTTGCAGGTTTTCCAGAGTaGTTTTCTCTGGCTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: EHKVRLYFSWLEDNLMYFAGFPE*FSLATV Trigger: GACTGTAGCCAGAGAAAACCACTCTGGAAAACCTGC...AAAATACATCAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR-3UTR TCA 90 bp | GAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGATGTATTTTTCTTGGCATCATGTCTaGGCACAGGTGTTAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: EHKVRLYFSWLEDNLMYFSWHHV*AQVLGF Trigger: AAAACCTAACACCTGTGCTCAGACATGATGCCAAGA...AAAATACATCAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR GCA 72 bp | AGAACCCAAGGTGTCACCAGCACAAGGCATCTGCACTaGTGGCTCTACAGCATGTTACTCTGCAACACATTG | + |
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Preference number: 3 (lower is better) Translates to: RTQGVTSTRHLH*WLYSMLLCNTL Trigger: CAATGTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGTGCAGATGCCTTGTGCTGGTGACACCTTGGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR GCA 72 bp | GGTGCCCAGCTTGTACTGCCATTTTATTGCAGTCCCTaGAACCACTGTTATACCCATGAAATCATGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: GAQLVLPFYCSP*NHCYTHEIMFP Trigger: TGGGAACATGATTTCATGGGTATAACAGTGGTTGCAGGGACTGCAATAAAATGGCAGTACAAGCTGGGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR GCA 72 bp | TCACTGGAAGGTGCCCAGCTTGTACTGCCATTTTATTaGAGTCCCTGCAACCACTGTTATACCCATGAAATC | + |
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Preference number: 3 (lower is better) Translates to: SLEGAQLVLPFY*SPCNHCYTHEI Trigger: GATTTCATGGGTATAACAGTGGTTGCAGGGACTGCAATAAAATGGCAGTACAAGCTGGGCACCTTCCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR TCA 72 bp | ACTGCTGGCTCTACAGCATGTTACTCTGCAACACATTaGAGCAAATGGCAGTGTTCAAAGTACAAAACCTAT | + |
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Preference number: 3 (lower is better) Translates to: TAGSTACYSATH*SKWQCSKYKTY Trigger: ATAGGTTTTGTACTTTGAACACTGCCATTTGCTTCAATGTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR TCA 72 bp | ATTTTATTGCAGTCCCTGCAACCACTGTTATACCCATaGAATCATGTTCCCAAATTTAAACCCTTACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ILLQSLQPLLYP*NHVPKFKPLLA Trigger: AGCCAGTAAGGGTTTAAATTTGGGAACATGATTTCATGGGTATAACAGTGGTTGCAGGGACTGCAATAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR CAA 72 bp | AACCCATCCCGAAGTGGGCTGTGGGCTTTTCCGCTCTaGGCATCATGTCTGAGCACAGGTGTTAGGTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: NPSRSGLWAFPL*ASCLSTGVRFY Trigger: GTAAAACCTAACACCTGTGCTCAGACATGATGCCAAGAGCGGAAAAGCCCACAGCCCACTTCGGGATGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| 3UTR CAA 72 bp | CATGTGTGTATTACCACTCACTGGAAGGTGCCCAGCTaGTACTGCCATTTTATTGCAGTCCCTGCAACCACT | + |
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Preference number: 4 (lower is better) Translates to: HVCITTHWKVPS*YCHFIAVPATT Trigger: AGTGGTTGCAGGGACTGCAATAAAATGGCAGTACAAGCTGGGCACCTTCCAGTGAGTGGTAATACACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| 3UTR CAA 72 bp | CACTGCTGGCTCTACAGCATGTTACTCTGCAACACATaGAAGCAAATGGCAGTGTTCAAAGTACAAAACCTA | + |
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Preference number: 4 (lower is better) Translates to: HCWLYSMLLCNT*KQMAVFKVQNL Trigger: TAGGTTTTGTACTTTGAACACTGCCATTTGCTTCAATGTGTTGCAGAGTAACATGCTGTAGAGCCAGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| CDS-3UTR CAA 90 bp | GGTGCCCAGCTTGTACTGCCATTTTATTGCAGTCCCTGCAACCACTGTTATACCAGCCATATGGGTCCTTaGCAGCCCACTCCACAACAT | + |
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Preference number: 5 (lower is better) Translates to: GAQLVLPFYCSPCNHCYTSHMGP*QPTPQH Trigger: ATGTTGTGGAGTGGGCTGCAAAGGACCCATATGGCT...GGTATAACAGTGGTTGCAGGGACTGCAATAAAATGGCAGTACAAGCTGGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 |
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| CDS-3UTR CAA 90 bp | CAGGAACAGCCTGGAAATTTCGTGAGAGTCCTTCCAAAGCTGCAGGTTTTCCAGAGCCATATGGGTCCTTaGCAGCCCACTCCACAACAT | + |
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Preference number: 5 (lower is better) Translates to: QEQPGNFVRVLPKLQVFQSHMGP*QPTPQH Trigger: ATGTTGTGGAGTGGGCTGCAAAGGACCCATATGGCT...CTGGAAAACCTGCAGCTTTGGAAGGACTCTCACGAAATTTCCAGGCTGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095458.6 ENSMUST00000223808.2 ENSMUST00000224361.2 ENSMUST00000224390.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| CDS-3UTR CAA 90 bp | ACCTTGAGGATGGGATCCAATTCTGAACACAAGGTCCGCTTATATTTCTCATGGAGCCATATGGGTCCTTaGCAGCCCACTCCACAACAT | + |
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Preference number: 5 (lower is better) Translates to: TLRMGSNSEHKVRLYFSWSHMGP*QPTPQH Trigger: ATGTTGTGGAGTGGGCTGCAAAGGACCCATATGGCT...CCATGAGAAATATAAGCGGACCTTGTGTTCAGAATTGGATCCCATCCTCAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095458.6 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGAACATGACTCTTCTGTACGGTCAGATTAATTCACTAAATAATACTATCAGCCATATGGGTCCTTaGCAGCCCACTCCACAACAT | + |
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Preference number: 5 (lower is better) Translates to: GQNMTLLYGQINSLNNTISHMGP*QPTPQH Trigger: ATGTTGTGGAGTGGGCTGCAAAGGACCCATATGGCT...GATAGTATTATTTAGTGAATTAATCTGACCGTACAGAAGAGTCATGTTCTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095458.6 ENSMUST00000223808.2 ENSMUST00000224361.2 ENSMUST00000224390.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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| CDS-3UTR CAA 90 bp | TCTGAACACAAGGTCCGCTTATATTTCTCATGGCTTGAAGATAACTTGATGTATCTGGCTTCAATCATCTaGGCCAACTTCCAGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: SEHKVRLYFSWLEDNLMYLASII*ANFQDS Trigger: ACTGTCCTGGAAGTTGGCCAAGATGATTGAAGCCAG...ATACATCAAGTTATCTTCAAGCCATGAGAAATATAAGCGGACCTTGTGTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095458.6 ENSMUST00000224361.2 ENSMUST00000225972.2 ENSMUST00000226042.2 |
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