Pregenerated sensors for SMIM10L2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054850Ensembl transcript IDs: ENSMUST00000068106.5
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTACAGAGGGCCTCCTGGACAGGCTGTCCCCAGCTTATCTGGATaGGGTTTCCCATGTGATGCCAGGGACAGGCCTGCAAGCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: AYRGPPGQAVPSLSG*GFPCDARDRPASLG Trigger: TCCCAGGCTTGCAGGCCTGTCCCTGGCATCACATGGGAAACCTCATCCAGATAAGCTGGGGACAGCCTGTCCAGGAGGCCCTCTGTAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 90 bp | CAGTGTCCAAGTGTCCACCCTTTTCTGTGGAGGGACCAGGTGACCTaGGCCACCTCACCCCTCTGGGCTCACCAGAAAGGCCCTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: QCPSVHPFLWRDQVT*ATSPLWAHQKGPSS Trigger: AGAAGAAGGGCCTTTCTGGTGAGCCCAGAGGGGTGAGGTGGCTCAGGTCACCTGGTCCCTCCACAGAAAAGGGTGGACACTTGGACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 90 bp | GATATCAGTGTCCAAGTGTCCACCCTTTTCTGTGGAGGGACCAGGTaGCCTGAGCCACCTCACCCCTCTGGGCTCACCAGAAAGGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: DISVQVSTLFCGGTR*PEPPHPSGLTRKAL Trigger: AAGGGCCTTTCTGGTGAGCCCAGAGGGGTGAGGTGGCTCAGGTCACCTGGTCCCTCCACAGAAAAGGGTGGACACTTGGACACTGATATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CCA 90 bp | CTTTCAGCTTGTGCCCTTTGGGGGAGACAAACTGAGATCTTCATCTaGGTCCCTGACTCGGAGTGGGCAGTTGGGCCACTCTGTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSACALWGRQTEIFI*VPDSEWAVGPLCPW Trigger: CCAGGGACAGAGTGGCCCAACTGCCCACTCCGAGTCAGGGACCCAGATGAAGATCTCAGTTTGTCTCCCCCAAAGGGCACAAGCTGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CCA 90 bp | GGGCAAACCCCAGGCACTTCCTTGAGCCCCATGGAGTTCATGAGGTaGGAGAACACATCTCCCTCACAGTGTTGCCAGGAGATATCAGTG | + |
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Preference number: 1 (lower is better) Translates to: GQTPGTSLSPMEFMR*ENTSPSQCCQEISV Trigger: CACTGATATCTCCTGGCAACACTGTGAGGGAGATGTGTTCTCCCACCTCATGAACTCCATGGGGCTCAAGGAAGTGCCTGGGGTTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 90 bp | ACTAGTGAAACTTGGGAGAAGGAAGCCATCAGTCCTGCCCTATGGTaGGTAGCAGAGGCCATGTGGCAGCCACCTTTCAGCTTGTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: TSETWEKEAISPALW*VAEAMWQPPFSLCP Trigger: AGGGCACAAGCTGAAAGGTGGCTGCCACATGGCCTCTGCTACTCACCATAGGGCAGGACTGATGGCTTCCTTCTCCCAAGTTTCACTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 90 bp | ATCAACTGTTCACCTGTCTTCCAGACCACCCCAAGGAAATGCAGATaGCTAGCTCGTCTATCTCACGCCCCCTCTTTCTCCCTAGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: INCSPVFQTTPRKCR*LARLSHAPSFSLGP Trigger: GGGACCTAGGGAGAAAGAGGGGGCGTGAGATAGACGAGCTAGGCATCTGCATTTCCTTGGGGTGGTCTGGAAGACAGGTGAACAGTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 90 bp | CAGACTCTGGTGATTCTCTGGATGCAGAGGAAAAGGACTGGGCTGTaGAGGTTTTTGCGGTATGGGATGTGGTTCCTCAGGCCCTTCGCA | + |
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Preference number: 1 (lower is better) Translates to: QTLVILWMQRKRTGL*RFLRYGMWFLRPFA Trigger: TGCGAAGGGCCTGAGGAACCACATCCCATACCGCAAAAACCTTCACAGCCCAGTCCTTTTCCTCTGCATCCAGAGAATCACCAGAGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 90 bp | TGGCATGCTGAAGGTTTCCATATCAGGGATGGAGTGCATAGACCTTaGGATACCAGTGCCAGAGGAGCTGGGGGACTGTGGGATAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: WHAEGFHIRDGVHRP*DTSARGAGGLWDKK Trigger: CTTCTTATCCCACAGTCCCCCAGCTCCTCTGGCACTGGTATCTCAAGGTCTATGCACTCCATCCCTGATATGGAAACCTTCAGCATGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 90 bp | AAAGTCTACCTAATATCAGTGTCTCTGATCTCACACCATAGCCCATaGCTGAGCATGGCCAGGGATGGGCTTCCCTGTAGTGTGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: KVYLISVSLISHHSP*LSMARDGLPCSVRS Trigger: AGACCTCACACTACAGGGAAGCCCATCCCTGGCCATGCTCAGGCATGGGCTATGGTGTGAGATCAGAGACACTGATATTAGGTAGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 90 bp | TATGAAATCAACTGTTCACCTGTCTTCCAGACCACCCCAAGGAAATaGAGATGCCTAGCTCGTCTATCTCACGCCCCCTCTTTCTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: YEINCSPVFQTTPRK*RCLARLSHAPSFSL Trigger: TAGGGAGAAAGAGGGGGCGTGAGATAGACGAGCTAGGCATCTGCATTTCCTTGGGGTGGTCTGGAAGACAGGTGAACAGTTGATTTCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CCA 90 bp | ATTTACATACAAGCCCATGCGCACACACATTCCACTATACATACGTaGACTACTAGTGAAACTTGGGAGAAGGAAGCCATCAGTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: IYIQAHAHTHSTIHT*TTSETWEKEAISPA Trigger: GGCAGGACTGATGGCTTCCTTCTCCCAAGTTTCACTAGTAGTCCACGTATGTATAGTGGAATGTGTGTGCGCATGGGCTTGTATGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CAA 90 bp | TGCCTAGCTCGTCTATCTCACGCCCCCTCTTTCTCCCTAGGTCCCTaGCTAGCTCTCCACTCCCTCCCAACCCCAATGTCCTGCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: CLARLSHAPSFSLGP*LALHSLPTPMSCQV Trigger: GACCTGGCAGGACATTGGGGTTGGGAGGGAGTGGAGAGCTAGCAAGGGACCTAGGGAGAAAGAGGGGGCGTGAGATAGACGAGCTAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR TCA 90 bp | ATCACAACTTCTAGCCTACAGAGGGCCTCCTGGACAGGCTGTCCCCAGCTTATCTGTGGAGGGACCAGGTaGCCTGAGCCACCTCACCCC | + |
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Preference number: 2 (lower is better) Translates to: ITTSSLQRASWTGCPQLICGGTR*PEPPHP Trigger: GGGGTGAGGTGGCTCAGGTCACCTGGTCCCTCCACA...GATAAGCTGGGGACAGCCTGTCCAGGAGGCCCTCTGTAGGCTAGAAGTTGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGTAGGCCATGTGATCCTTCCTGTACTTGGAACACAGGGGATTCTCAGGAGCAGTCTGGAGGCACTGTaGGCCCCGCTGTCCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PVGHVILPVLGTQGILRSSLEAL*APLSFL Trigger: CAGGAAGGACAGCGGGGCGCACAGTGCCTCCAGACT...GCTCCTGAGAATCCCCTGTGTTCCAAGTACAGGAAGGATCACATGGCCTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGTAGGCCATGTGATCCTTCCTGTACTTGGAACACAGGGGATTCTCAGGAGCGGGCTCTCCCGCTTTTaGCCAATGGGGAGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: PVGHVILPVLGTQGILRSGLSRF*PMGRQQ Trigger: CTGTTGCCTCCCCATTGGCCAAAAGCGGGAGAGCCC...GCTCCTGAGAATCCCCTGTGTTCCAAGTACAGGAAGGATCACATGGCCTACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | TCACAACTTCTAGCCTACAGAGGGCCTCCTGGACAGGCTGTCCCCAGCTTATCTAACAGGGCCTTAGCATaGGTCTCAGCCCACATCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQLLAYRGPPGQAVPSLSNRALA*VSAHIS Trigger: GGAGATGTGGGCTGAGACCCATGCTAAGGCCCTGTT...AGATAAGCTGGGGACAGCCTGTCCAGGAGGCCCTCTGTAGGCTAGAAGTTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | TCATTTCTCCCAGTAGGCCATGTGATCCTTCCTGTACTTGGAACACAGGGGATTGCCACCTCACCCCTCTaGGCTCACCAGAAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SFLPVGHVILPVLGTQGIATSPL*AHQKGP Trigger: AGGGCCTTTCTGGTGAGCCCAGAGGGGTGAGGTGGC...AATCCCCTGTGTTCCAAGTACAGGAAGGATCACATGGCCTACTGGGAGAAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGAAGCTCCTCTGCCTGCCTGCAGTACAGACTGCAAATAAAGTGCACCATACAGGCCTGCAAGCCTaGGAACAGAGAAACAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLKLLCLPAVQTANKVHHTGLQA*EQRNRA Trigger: GGCCCTGTTTCTCTGTTCCCAGGCTTGCAGGCCTGT...ATGGTGCACTTTATTTGCAGTCTGTACTGCAGGCAGGCAGAGGAGCTTCAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCCCTACCCAATGGATCCACCCCCATCACACACATTTACATACAAGCCCAGTAGCAGAGGCCATGTaGCAGCCACCTTTCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLPTQWIHPHHTHLHTSPVAEAM*QPPFSL Trigger: CAAGCTGAAAGGTGGCTGCCACATGGCCTCTGCTAC...TGGGCTTGTATGTAAATGTGTGTGATGGGGGTGGATCCATTGGGTAGGGAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR TCA 90 bp | TCATTTCTCCCAGTAGGCCATGTGATCCTTCCTGTACTTGGAACACAGGGGATTTGTTCAGTGAAGGGCTaGGCCATCACCCAGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: SFLPVGHVILPVLGTQGICSVKG*AITQKT Trigger: GGTCTTCTGGGTGATGGCTCAGCCCTTCACTGAACA...AATCCCCTGTGTTCCAAGTACAGGAAGGATCACATGGCCTACTGGGAGAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAACAGGTTTGCCAGACTCTGGTGATTCTCTGGATGCAGAGGAAAAGGACGGCTGTGAAGGTTTTTaGGGTATGGGATGTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: EATGLPDSGDSLDAEEKDGCEGF*GMGCGS Trigger: GGAACCACATCCCATACCGCAAAAACCTTCACAGCC...GTCCTTTTCCTCTGCATCCAGAGAATCACCAGAGTCTGGCAAACCTGTTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCCTACCCAATGGATCCACCCCCATCACACACATTTACATACAAGCCCATTTGCCAGACTCTGGTaGTTCTCTGGATGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLPTQWIHPHHTHLHTSPFARLW*FSGCRG Trigger: TCCTCTGCATCCAGAGAATCACCAGAGTCTGGCAAA...TGGGCTTGTATGTAAATGTGTGTGATGGGGGTGGATCCATTGGGTAGGGAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR TCA 90 bp | TCACACTCATTTCTCCCAGTAGGCCATGTGATCCTTCCTGTACTTGGAACACAGTGTCCTGCCAGGTCATaGAGAAACTGCAGAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SHSFLPVGHVILPVLGTQCPARS*RNCRKG Trigger: ACCCTTTCTGCAGTTTCTTCATGACCTGGCAGGACA...CTGTGTTCCAAGTACAGGAAGGATCACATGGCCTACTGGGAGAAATGAGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR TCA 90 bp | AAACAGGGCCTTAGCATGGGTCTCAGCCCACATCTCCTCAACCTTCCAGTGACACTTCCCCTCTGTTTATaGAATCAACTGTTCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: KQGLSMGLSPHLLNLPVTLPLCL*NQLFTC Trigger: ACAGGTGAACAGTTGATTTCATAAACAGAGGGGAAG...TGTCACTGGAAGGTTGAGGAGATGTGGGCTGAGACCCATGCTAAGGCCCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGAAGCTCCTCTGCCTGCCTGCAGTACAGACTGCAAATAAAGTGCACCATAAGGTTTTTGCGGTATaGGATGTGGTTCCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLKLLCLPAVQTANKVHHKVFAV*DVVPQA Trigger: GGCCTGAGGAACCACATCCCATACCGCAAAAACCTT...ATGGTGCACTTTATTTGCAGTCTGTACTGCAGGCAGGCAGAGGAGCTTCAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | CACCCCTCTGGGCTCACCAGAAAGGCCCTTCTTCTCCTTCTTCTTCTTCTTCTTACTCTGGTGATTCTCTaGATGCAGAGGAAAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: HPSGLTRKALLLLLLLLLTLVIL*MQRKRT Trigger: AGTCCTTTTCCTCTGCATCCAGAGAATCACCAGAGT...AAGAAGAAGAAGAAGAAGGAGAAGAAGGGCCTTTCTGGTGAGCCCAGAGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCTTCTCTCCCTACCCAATGGATCCACCCCCATCACACACATTTACATACCCCTTGAGCTGTCCTTaGTCATTTAGAGATCACAAC | + |
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Preference number: 2 (lower is better) Translates to: RSFSPYPMDPPPSHTFTYPLSCP*SFRDHN Trigger: GTTGTGATCTCTAAATGACCAAGGACAGCTCAAGGG...GTATGTAAATGTGTGTGATGGGGGTGGATCCATTGGGTAGGGAGAGAAGCTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTACATACAAGCCCATGCGCACACACATTCCACTATACATACGTGGACTACTAAAAGGACTGGGCTGTaGAGGTTTTTGCGGTATGGG | + |
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Preference number: 2 (lower is better) Translates to: IYIQAHAHTHSTIHTWTTKRTGL*RFLRYG Trigger: CCCATACCGCAAAAACCTTCACAGCCCAGTCCTTTT...AGTAGTCCACGTATGTATAGTGGAATGTGTGTGCGCATGGGCTTGTATGTAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR GCA 90 bp | TTGTTGAAGCTCCTCTGCCTGCCTGCAGTACAGACTGCAAATAAAGTGCACCATATATCAGGGATGGAGTaGATAGACCTTGAGATACCA | + |
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Preference number: 2 (lower is better) Translates to: LLKLLCLPAVQTANKVHHISGME*IDLEIP Trigger: TGGTATCTCAAGGTCTATGCACTCCATCCCTGATAT...ATGGTGCACTTTATTTGCAGTCTGTACTGCAGGCAGGCAGAGGAGCTTCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CAA 90 bp | TGTAAACATGAGGATGTCAGGTCATCCAGGTTAAGTCTGAATTTGTaGAAGCTCCTCTGCCTGCCTGCAGTACAGACTGCAAATAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: CKHEDVRSSRLSLNL*KLLCLPAVQTANKV Trigger: CACTTTATTTGCAGTCTGTACTGCAGGCAGGCAGAGGAGCTTCAACAAATTCAGACTTAACCTGGATGACCTGACATCCTCATGTTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 72 bp | GCAGTCTGGAGGCACTGTGCGCCCCGCTGTCCTTCCTaGGGCCGCCAGGATGGCGCGGAAGGCGCGGATGGC | + |
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Preference number: 3 (lower is better) Translates to: AVWRHCAPRCPS*GRQDGAEGADG Trigger: GCCATCCGCGCCTTCCGCGCCATCCTGGCGGCCGCAGGAAGGACAGCGGGGCGCACAGTGCCTCCAGACTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 72 bp | AGTGTCCACCCTTTTCTGTGGAGGGACCAGGTGACCTaGGCCACCTCACCCCTCTGGGCTCACCAGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SVHPFLWRDQVT*ATSPLWAHQKG Trigger: GCCTTTCTGGTGAGCCCAGAGGGGTGAGGTGGCTCAGGTCACCTGGTCCCTCCACAGAAAAGGGTGGACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 72 bp | GTCCAAGTGTCCACCCTTTTCTGTGGAGGGACCAGGTaGCCTGAGCCACCTCACCCCTCTGGGCTCACCAGA | + |
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Preference number: 3 (lower is better) Translates to: VQVSTLFCGGTR*PEPPHPSGLTR Trigger: TCTGGTGAGCCCAGAGGGGTGAGGTGGCTCAGGTCACCTGGTCCCTCCACAGAAAAGGGTGGACACTTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 72 bp | GGGCCTCCTGGACAGGCTGTCCCCAGCTTATCTGGATaGGGTTTCCCATGTGATGCCAGGGACAGGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GPPGQAVPSLSG*GFPCDARDRPA Trigger: TGCAGGCCTGTCCCTGGCATCACATGGGAAACCTCATCCAGATAAGCTGGGGACAGCCTGTCCAGGAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CCA 72 bp | TGTGCCCTTTGGGGGAGACAAACTGAGATCTTCATCTaGGTCCCTGACTCGGAGTGGGCAGTTGGGCCACTC | + |
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Preference number: 3 (lower is better) Translates to: CALWGRQTEIFI*VPDSEWAVGPL Trigger: GAGTGGCCCAACTGCCCACTCCGAGTCAGGGACCCAGATGAAGATCTCAGTTTGTCTCCCCCAAAGGGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 72 bp | GGCCAATGGGGAGGCAACAGGTTTGCCAGACTCTGGTaGTTCTCTGGATGCAGAGGAAAAGGACTGGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: GQWGGNRFARLW*FSGCRGKGLGC Trigger: ACAGCCCAGTCCTTTTCCTCTGCATCCAGAGAATCACCAGAGTCTGGCAAACCTGTTGCCTCCCCATTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 72 bp | CAATGCCATCCTCACTGCAGTCTCCTAGCACACAAGTaGTCAGGAGCCCTCGGTCAAGCACCAGTCAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: QCHPHCSLLAHK*SGALGQAPVKL Trigger: CAACTTGACTGGTGCTTGACCGAGGGCTCCTGAGCACTTGTGTGCTAGGAGACTGCAGTGAGGATGGCATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CCA 72 bp | CCGGACAGCGCTGGCCATGCAGAGTCCCATCGCACATaGAAATGTAAACATGAGGATGTCAGGTCATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PDSAGHAESHRT*KCKHEDVRSSR Trigger: CCTGGATGACCTGACATCCTCATGTTTACATTTCCATGTGCGATGGGACTCTGCATGGCCAGCGCTGTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 72 bp | CTCTCCCGCTTTTGGCCAATGGGGAGGCAACAGGTTTaGCAGACTCTGGTGATTCTCTGGATGCAGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LSRFWPMGRQQV*QTLVILWMQRK Trigger: TTTCCTCTGCATCCAGAGAATCACCAGAGTCTGGCAAACCTGTTGCCTCCCCATTGGCCAAAAGCGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 72 bp | AACTGTTCACCTGTCTTCCAGACCACCCCAAGGAAATaGAGATGCCTAGCTCGTCTATCTCACGCCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: NCSPVFQTTPRK*RCLARLSHAPS Trigger: AGAGGGGGCGTGAGATAGACGAGCTAGGCATCTGCATTTCCTTGGGGTGGTCTGGAAGACAGGTGAACAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 72 bp | CTAATATCAGTGTCTCTGATCTCACACCATAGCCCATaGCTGAGCATGGCCAGGGATGGGCTTCCCTGTAGT | + |
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Preference number: 3 (lower is better) Translates to: LISVSLISHHSP*LSMARDGLPCS Trigger: ACTACAGGGAAGCCCATCCCTGGCCATGCTCAGGCATGGGCTATGGTGTGAGATCAGAGACACTGATATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 72 bp | GTGATTCTCTGGATGCAGAGGAAAAGGACTGGGCTGTaGAGGTTTTTGCGGTATGGGATGTGGTTCCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VILWMQRKRTGL*RFLRYGMWFLR Trigger: CCTGAGGAACCACATCCCATACCGCAAAAACCTTCACAGCCCAGTCCTTTTCCTCTGCATCCAGAGAATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 72 bp | GCATGGGTCTCAGCCCACATCTCCTCAACCTTCCAGTaGCATCATGACCCTATAAACCACAATGCCATCCTC | + |
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Preference number: 3 (lower is better) Translates to: AWVSAHISSTFQ*HHDPINHNAIL Trigger: GAGGATGGCATTGTGGTTTATAGGGTCATGATGTCACTGGAAGGTTGAGGAGATGTGGGCTGAGACCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CCA 72 bp | TTAGAGATCACAACTTCTAGCCTACAGAGGGCCTCCTaGACAGGCTGTCCCCAGCTTATCTGGATGAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LEITTSSLQRAS*TGCPQLIWMRF Trigger: AAACCTCATCCAGATAAGCTGGGGACAGCCTGTCCAGGAGGCCCTCTGTAGGCTAGAAGTTGTGATCTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR TCA 72 bp | CCTCTAGGATTCGAGTTGAAATGTTCAGTGAAGGGCTaGGCCATCACCCAGAAGACCAATGCCTTTAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: PLGFELKCSVKG*AITQKTNAFRH Trigger: GTGCCTAAAGGCATTGGTCTTCTGGGTGATGGCTCAGCCCTTCACTGAACATTTCAACTCGAATCCTAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 72 bp | TCCTCTGCCTGCCTGCAGTACAGACTGCAAATAAAGTaGACCATGATATCATACAGCGAGGGCACTACGGAA | + |
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Preference number: 3 (lower is better) Translates to: SSACLQYRLQIK*TMISYSEGTTE Trigger: TTCCGTAGTGCCCTCGCTGTATGATATCATGGTGCACTTTATTTGCAGTCTGTACTGCAGGCAGGCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CCA 72 bp | GACTCTGGTGATTCTCTGGATGCAGAGGAAAAGGACTaGGCTGTGAAGGTTTTTGCGGTATGGGATGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: DSGDSLDAEEKD*AVKVFAVWDVV Trigger: AACCACATCCCATACCGCAAAAACCTTCACAGCCCAGTCCTTTTCCTCTGCATCCAGAGAATCACCAGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR-3UTR CAA 90 bp | TCATTTCTCCCAGTAGGCCATGTGATCCTTCCTGTACTTGGAACACAGGGGATTCCTCTAGGATTCGAGTaGAAATGTTCAGTGAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: SFLPVGHVILPVLGTQGIPLGFE*KCSVKG Trigger: GCCCTTCACTGAACATTTCAACTCGAATCCTAGAGG...AATCCCCTGTGTTCCAAGTACAGGAAGGATCACATGGCCTACTGGGAGAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR GCA 72 bp | TCATCCAGGTTAAGTCTGAATTTGTTGAAGCTCCTCTaGCTGCCTGCAGTACAGACTGCAAATAAAGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SSRLSLNLLKLL*LPAVQTANKVH Trigger: GTGCACTTTATTTGCAGTCTGTACTGCAGGCAGGCAGAGGAGCTTCAACAAATTCAGACTTAACCTGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CAA 72 bp | GTTCATGAGGTGGGAGAACACATCTCCCTCACAGTGTaGCCAGGAGATATCAGTGTCCAAGTGTCCACCCTT | + |
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Preference number: 4 (lower is better) Translates to: VHEVGEHISLTV*PGDISVQVSTL Trigger: AAGGGTGGACACTTGGACACTGATATCTCCTGGCAACACTGTGAGGGAGATGTGTTCTCCCACCTCATGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CAA 72 bp | GAGGATGTCAGGTCATCCAGGTTAAGTCTGAATTTGTaGAAGCTCCTCTGCCTGCCTGCAGTACAGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: EDVRSSRLSLNL*KLLCLPAVQTA Trigger: TGCAGTCTGTACTGCAGGCAGGCAGAGGAGCTTCAACAAATTCAGACTTAACCTGGATGACCTGACATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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| 3UTR CAA 72 bp | CATGAGGATGTCAGGTCATCCAGGTTAAGTCTGAATTaGTTGAAGCTCCTCTGCCTGCCTGCAGTACAGACT | + |
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Preference number: 4 (lower is better) Translates to: HEDVRSSRLSLN*LKLLCLPAVQT Trigger: AGTCTGTACTGCAGGCAGGCAGAGGAGCTTCAACAAATTCAGACTTAACCTGGATGACCTGACATCCTCATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068106.5 |
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