Pregenerated sensors for SMIM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078350Ensembl transcript IDs: ENSMUST00000125533.9, ENSMUST00000126119.8, ENSMUST00000130175.8, ENSMUST00000131325.3, ENSMUST00000132541.8, ENSMUST00000143047.8, ENSMUST00000145527.8, ENSMUST00000146054.8, ENSMUST00000146543.9, ENSMUST00000182151.8, ENSMUST00000182191.8
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | TACTGGGCAGCTGCCAGGAGTGGGCTGGGAGCACCTGACCCAGTGTaGAGTGCAGAATGTGGCTGGAAGCCCGCCTCACTGTCAGCCCGG | + |
Preference number: 1 (lower is better) Translates to: YWAAARSGLGAPDPV*SAECGWKPASLSAR Trigger: CCGGGCTGACAGTGAGGCGGGCTTCCAGCCACATTCTGCACTCCACACTGGGTCAGGTGCTCCCAGCCCACTCCTGGCAGCTGCCCAGTA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 90 bp | GGGGAGGCAGCCGGTAGGGCACACAGCTTCTCTCCGGGCCATCCCTaGGGTGGTAAGCCCCTGTGCCCTGCACAGAAAGATTTGAGGCCC | + |
Preference number: 1 (lower is better) Translates to: GEAAGRAHSFSPGHP*GGKPLCPAQKDLRP Trigger: GGGCCTCAAATCTTTCTGTGCAGGGCACAGGGGCTTACCACCTCAGGGATGGCCCGGAGAGAAGCTGTGTGCCCTACCGGCTGCCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | AGTGGGCTGGGAGCACCTGACCCAGTGTGGAGTGCAGAATGTGGCTaGAAGCCCGCCTCACTGTCAGCCCGGGACTACAGGAGACGCCTG | + |
Preference number: 1 (lower is better) Translates to: SGLGAPDPVWSAECG*KPASLSARDYRRRL Trigger: CAGGCGTCTCCTGTAGTCCCGGGCTGACAGTGAGGCGGGCTTCCAGCCACATTCTGCACTCCACACTGGGTCAGGTGCTCCCAGCCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 90 bp | GCTGGAAGCCCGCCTCACTGTCAGCCCGGGACTACAGGAGACGCCTaGGGACAGTGCTCCCGTTCCTTTCCTTCCACATGGTGCCTCCTG | + |
Preference number: 1 (lower is better) Translates to: AGSPPHCQPGTTGDA*GQCSRSFPSTWCLL Trigger: CAGGAGGCACCATGTGGAAGGAAAGGAACGGGAGCACTGTCCTCAGGCGTCTCCTGTAGTCCCGGGCTGACAGTGAGGCGGGCTTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | CCCAGCAGCTGCACAGAGGACTTGGTGGCCCCGTGCCTTGCCATCTaGCTGAGAAGAGAACCAGACCCTCAGCCTTCCCCCTCGACACCT | + |
Preference number: 1 (lower is better) Translates to: PSSCTEDLVAPCLAI*LRREPDPQPSPSTP Trigger: AGGTGTCGAGGGGGAAGGCTGAGGGTCTGGTTCTCTTCTCAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTGTGCAGCTGCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 90 bp | TCCGCAAGATTACTGGGCAGCTGCCAGGAGTGGGCTGGGAGCACCTaGCCCAGTGTGGAGTGCAGAATGTGGCTGGAAGCCCGCCTCACT | + |
Preference number: 1 (lower is better) Translates to: SARLLGSCQEWAGST*PSVECRMWLEARLT Trigger: AGTGAGGCGGGCTTCCAGCCACATTCTGCACTCCACACTGGGTCAGGTGCTCCCAGCCCACTCCTGGCAGCTGCCCAGTAATCTTGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | ACTGATAGCAGCAGCCCCTGTGCCTGCCACCCTCTCAGGTCAGTGTaGAGACCTCACAGTTTTCTAGCCACAGCCCGCCAGCCTTGCGCC | + |
Preference number: 1 (lower is better) Translates to: TDSSSPCACHPLRSV*RPHSFLATARQPCA Trigger: GGCGCAAGGCTGGCGGGCTGTGGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCACAGGGGCTGCTGCTATCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | TGCCGCCATGCTCCCAGGGCAGCATCTGCCTTCCACGGCTGTGCTTaGAACTGTAGTGCTGGTCGTTGTTGGCACATCTGCGCCTTGGCC | + |
Preference number: 1 (lower is better) Translates to: CRHAPRAASAFHGCA*NCSAGRCWHICALA Trigger: GGCCAAGGCGCAGATGTGCCAACAACGACCAGCACTACAGTTCCAAGCACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | GTACGCATCTGTACCAGCACACAGCTGCCATCCCTCGAGCCACAGTaGCTGGTCCTAAGGACCCAGCAGCTGCACAGAGGACTTGGTGGC | + |
Preference number: 1 (lower is better) Translates to: VRICTSTQLPSLEPQ*LVLRTQQLHRGLGG Trigger: GCCACCAAGTCCTCTGTGCAGCTGCTGGGTCCTTAGGACCAGGCACTGTGGCTCGAGGGATGGCAGCTGTGTGCTGGTACAGATGCGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | GTCAGGAGGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTaGAGGAGGGTCAGGCCTGGAACAAGTCATGCCTGGCTGGGCAGT | + |
Preference number: 1 (lower is better) Translates to: VRRGTFQDRAKQEEL*RRVRPGTSHAWLGS Trigger: ACTGCCCAGCCAGGCATGACTTGTTCCAGGCCTGACCCTCCTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCCTCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | TCTGGCCTCCTTCCTTTGGCCACTGATAGCAGCAGCCCCTGTGCCTaGCACCCTCTCAGGTCAGTGTGCAGACCTCACAGTTTTCTAGCC | + |
Preference number: 1 (lower is better) Translates to: SGLLPLATDSSSPCA*HPLRSVCRPHSFLA Trigger: GGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | CTGTGTGACTCTCGCTGGTGGCTGCCTGGGCTGGGGTTTCAGTCTTaGGTCTACCCTGTGTACTGGAGATGGGGAGCCATGTTGACAGTG | + |
Preference number: 1 (lower is better) Translates to: LCDSRWWLPGLGFQS*VYPVYWRWGAMLTV Trigger: CACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGAGAGTCACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 90 bp | GTCCTCACATGGTCCAGTAAGGAGGGAACAGGTCCAGCCACATCCTaGCCCTTGGGTCTCTGTGTTCTTGGGAGAAGGCCCAGTCAGGAG | + |
Preference number: 1 (lower is better) Translates to: VLTWSSKEGTGPATS*PLGLCVLGRRPSQE Trigger: CTCCTGACTGGGCCTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTGTTCCCTCCTTACTGGACCATGTGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | GAGCCACAGTCGTTATTCAGGGCCCATCCTGCACAACCAGGAATCTaGAAGGCCAAAAGACCAGGAGCCCTGCCCACAGGGAGAAGCTCA | + |
Preference number: 1 (lower is better) Translates to: EPQSLFRAHPAQPGI*KAKRPGALPTGRSS Trigger: TGAGCTTCTCCCTGTGGGCAGGGCTCCTGGTCTTTTGGCCTTCCAGATTCCTGGTTGTGCAGGATGGGCCCTGAATAACGACTGTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | ACACTGGCATCTTCATATGCCCTGGGGTCTGTATGGAGGAGTGTCTaGACAAATGGCCTGTGTACATGGGAGGGAATCCCCAGGGCTGGG | + |
Preference number: 1 (lower is better) Translates to: TLASSYALGSVWRSV*TNGLCTWEGIPRAG Trigger: CCCAGCCCTGGGGATTCCCTCCCATGTACACAGGCCATTTGTGCAGACACTCCTCCATACAGACCCCAGGGCATATGAAGATGCCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | TGTTGTGAGTGTAATCTTCTTAGAGCTTGTTTCCAGGCACCGTGCTaGCGCCATGCTCCCAGGGCAGCATCTGCCTTCCACGGCTGTGCT | + |
Preference number: 1 (lower is better) Translates to: CCECNLLRACFQAPC*RHAPRAASAFHGCA Trigger: AGCACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCTGGAAACAAGCTCTAAGAAGATTACACTCACAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | GGTGCCTCCTGCATCAAATACTACTCCTTCCTGTCACCTCTCTACTaGACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTAC | + |
Preference number: 1 (lower is better) Translates to: GASCIKYYSFLSPLY*THVPGSAMSALSCY Trigger: GTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGTAGAGAGGTGACAGGAAGGAGTAGTATTTGATGCAGGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | GCAGGCTCCATGTCAGCGTGTCCCACTATTCATGTCCCATCTCTGTaGATCCTGACTGCGCACATCCCATCTCCGCATGTGTACGCATCT | + |
Preference number: 1 (lower is better) Translates to: AGSMSACPTIHVPSL*ILTAHIPSPHVYAS Trigger: AGATGCGTACACATGCGGAGATGGGATGTGCGCAGTCAGGATGCACAGAGATGGGACATGAATAGTGGGACACGCTGACATGGAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | TCATGTTGTGAGTGTAATCTTCTTAGAGCTTGTTTCCAGGCACCGTaGTGCCGCCATGCTCCCAGGGCAGCATCTGCCTTCCACGGCTGT | + |
Preference number: 1 (lower is better) Translates to: SCCECNLLRACFQAP*CRHAPRAASAFHGC Trigger: ACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCTGGAAACAAGCTCTAAGAAGATTACACTCACAACATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | CCTGGGCTGGGGTTTCAGTCTTGGGTCTACCCTGTGTACTGGAGATaGGGAGCCATGTTGACAGTGCACACTGGCATCTTCATATGCCCT | + |
Preference number: 1 (lower is better) Translates to: PGLGFQSWVYPVYWR*GAMLTVHTGIFICP Trigger: AGGGCATATGAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAAACCCCAGCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | TGGCTGCCTGGGCTGGGGTTTCAGTCTTGGGTCTACCCTGTGTACTaGAGATGGGGAGCCATGTTGACAGTGCACACTGGCATCTTCATA | + |
Preference number: 1 (lower is better) Translates to: WLPGLGFQSWVYPVY*RWGAMLTVHTGIFI Trigger: TATGAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAAACCCCAGCCCAGGCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | GTCCTTTGTAGTCAGACAGATGCTTCGTGGACTGTGCCTCACACATaGCCCTGCAGGCTCCATGTCAGCGTGTCCCACTATTCATGTCCC | + |
Preference number: 1 (lower is better) Translates to: VLCSQTDASWTVPHT*PCRLHVSVSHYSCP Trigger: GGGACATGAATAGTGGGACACGCTGACATGGAGCCTGCAGGGCCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | TGGAGATGGGGAGCCATGTTGACAGTGCACACTGGCATCTTCATATaGCCTGGGGTCTGTATGGAGGAGTGTCTGCACAAATGGCCTGTG | + |
Preference number: 1 (lower is better) Translates to: WRWGAMLTVHTGIFI*PGVCMEECLHKWPV Trigger: CACAGGCCATTTGTGCAGACACTCCTCCATACAGACCCCAGGGCATATGAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | GTCAGCGTGTCCCACTATTCATGTCCCATCTCTGTGCATCCTGACTaGGCACATCCCATCTCCGCATGTGTACGCATCTGTACCAGCACA | + |
Preference number: 1 (lower is better) Translates to: VSVSHYSCPISVHPD*AHPISACVRICTST Trigger: TGTGCTGGTACAGATGCGTACACATGCGGAGATGGGATGTGCGCAGTCAGGATGCACAGAGATGGGACATGAATAGTGGGACACGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | TTCACAGCATACTGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATaGGCCACTGGAGAGGGGACCAAAGTCCCCATCGAGTCACAGTGC | + |
Preference number: 1 (lower is better) Translates to: FTAYWEQGVVQRSST*ATGEGTKVPIESQC Trigger: GCACTGTGACTCGATGGGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCAGTATGCTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 90 bp | TTCAGTCTTGGGTCTACCCTGTGTACTGGAGATGGGGAGCCATGTTaGCAGTGCACACTGGCATCTTCATATGCCCTGGGGTCTGTATGG | + |
Preference number: 1 (lower is better) Translates to: FSLGSTLCTGDGEPC*QCTLASSYALGSVW Trigger: CCATACAGACCCCAGGGCATATGAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 90 bp | CCTGAGGACAGTGCTCCCGTTCCTTTCCTTCCACATGGTGCCTCCTaGATCAAATACTACTCCTTCCTGTCACCTCTCTACTGCACCCAT | + |
Preference number: 1 (lower is better) Translates to: PEDSAPVPFLPHGAS*IKYYSFLSPLYCTH Trigger: ATGGGTGCAGTAGAGAGGTGACAGGAAGGAGTAGTATTTGATGCAGGAGGCACCATGTGGAAGGAAAGGAACGGGAGCACTGTCCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | GTTATCTATGTCCGTGTAGTCCTTTGTAGTCAGACAGATGCTTCGTaGACTGTGCCTCACACATGGCCCTGCAGGCTCCATGTCAGCGTG | + |
Preference number: 1 (lower is better) Translates to: VIYVRVVLCSQTDAS*TVPHTWPCRLHVSV Trigger: CACGCTGACATGGAGCCTGCAGGGCCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGACTACACGGACATAGATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | TCTGCCTTCCACGGCTGTGCTTGGAACTGTAGTGCTGGTCGTTGTTaGCACATCTGCGCCTTGGCCAAGGAAGTTATCTATGTCCGTGTA | + |
Preference number: 1 (lower is better) Translates to: SAFHGCAWNCSAGRC*HICALAKEVIYVRV Trigger: TACACGGACATAGATAACTTCCTTGGCCAAGGCGCAGATGTGCCAACAACGACCAGCACTACAGTTCCAAGCACAGCCGTGGAAGGCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 90 bp | AGTAACTGCTGGGGATGTTCTGAATCATGTGGCCTGTGGCCGTGCTaGAGAGTCAGGTTGAACGCAGGCATTCTATTGAACAGTATTTAT | + |
Preference number: 1 (lower is better) Translates to: SNCWGCSESCGLWPC*RVRLNAGILLNSIY Trigger: ATAAATACTGTTCAATAGAATGCCTGCGTTCAACCTGACTCTCCAGCACGGCCACAGGCCACATGATTCAGAACATCCCCAGCAGTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CTGGCCTCCTTCCTTTGGCCACTGATAGCAGCAGCCCCTGTGCCTGCCACCCTCGTTCCCGAGTGGGCATaGGTGGGGAAGCGGCGGGCT | + |
Preference number: 2 (lower is better) Translates to: LASFLWPLIAAAPVPATLVPEWA*VGKRRA Trigger: AGCCCGCCGCTTCCCCACCCATGCCCACTCGGGAAC...GAGGGTGGCAGGCACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | AGGCACCGTGCTGCCGCCATGCTCCCAGGGCAGCATCTGCCTTCCACGGCTGTGGCAGGGGTTGGCTTCTaGCCTCCTTCCTTTGGCCAC | + |
Preference number: 2 (lower is better) Translates to: RHRAAAMLPGQHLPSTAVAGVGF*PPSFGH Trigger: GTGGCCAAAGGAAGGAGGCCAGAAGCCAACCCCTGC...CACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | AGGCACCGTGCTGCCGCCATGCTCCCAGGGCAGCATCTGCCTTCCACGGCTGTGAAAGACCAGGAGCCCTaGCCACAGGGAGAAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: RHRAAAMLPGQHLPSTAVKDQEP*PQGEAH Trigger: GTGAGCTTCTCCCTGTGGGCAGGGCTCCTGGTCTTT...CACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR TCA 90 bp | GGACCCAGCAGCTGCACAGAGGACTTGGTGGCCCCGTGCCTTGCCATCTGGCTGGGTCCAGCCACATCCTaGCCCTTGGGTCTCTGTGTT | + |
Preference number: 2 (lower is better) Translates to: GPSSCTEDLVAPCLAIWLGPATS*PLGLCV Trigger: AACACAGAGACCCAAGGGTCAGGATGTGGCTGGACC...CAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTGTGCAGCTGCTGGGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGACCCAGCAGCTGCACAGAGGACTTGGTGGCCCCGTGCCTTGCCATCTGGCTGGGGAAGATGGAGCACTaGCCAAAGGAATCGGGGCAC | + |
Preference number: 2 (lower is better) Translates to: GPSSCTEDLVAPCLAIWLGKMEH*PKESGH Trigger: GTGCCCCGATTCCTTTGGCCAGTGCTCCATCTTCCC...CAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTGTGCAGCTGCTGGGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | TTCTTAGAGCTTGTTTCCAGGCACCGTGCTGCCGCCATGCTCCCAGGGCAGCATTTCCAGGCACCGTGCTaGCGCCATGCTCCCAGGGCA | + |
Preference number: 2 (lower is better) Translates to: FLELVSRHRAAAMLPGQHFQAPC*RHAPRA Trigger: TGCCCTGGGAGCATGGCGGCAGCACGGTGCCTGGAA...ATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCTGGAAACAAGCTCTAAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | ACAGCTGCCATCCCTCGAGCCACAGTGCCTGGTCCTAAGGACCCAGCAGCTGCAGGGGTGCGGGTGAGGTaGAGAACACACCACCGTCTT | + |
Preference number: 2 (lower is better) Translates to: TAAIPRATVPGPKDPAAAGVRVR*RTHHRL Trigger: AAGACGGTGGTGTGTTCTCCACCTCACCCGCACCCC...TGCAGCTGCTGGGTCCTTAGGACCAGGCACTGTGGCTCGAGGGATGGCAGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR TCA 90 bp | AGGCACCGTGCTGCCGCCATGCTCCCAGGGCAGCATCTGCCTTCCACGGCTGTGACACCTTCTCGTTGGTaGCCTCTGACCTTAAAGGAC | + |
Preference number: 2 (lower is better) Translates to: RHRAAAMLPGQHLPSTAVTPSRW*PLTLKD Trigger: GTCCTTTAAGGTCAGAGGTCACCAACGAGAAGGTGT...CACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | GGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTGGAGGAGGGTCAGGCACTCTCGCTGGTGGCTaGCTGGGCTGGGGTTTCAGT | + |
Preference number: 2 (lower is better) Translates to: GAHSKTEPNRRSCGGGSGTLAGG*LGWGFS Trigger: ACTGAAACCCCAGCCCAGGCAGCCACCAGCGAGAGT...GCCTGACCCTCCTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | CATGAGACACGGCTGCTCACAGGTCCCTTTGAGTGGCTGTGGCAAGTACTCACCTTGCGATGCCCGCCTTaGGGCAGCTCAGGACTGGGG | + |
Preference number: 2 (lower is better) Translates to: HETRLLTGPFEWLWQVLTLRCPP*GSSGLG Trigger: CCCCAGTCCTGAGCTGCCGCAAGGCGGGCATCGCAA...GGTGAGTACTTGCCACAGCCACTCAAAGGGACCTGTGAGCAGCCGTGTCTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CAGGGGTTGGCTTCTGGCCTCCTTCCTTTGGCCACTGATAGCAGCAGCCCCTGTGGTGGCTGCCTGGGCTaGGGTTTCAGTCTTGGGTCT | + |
Preference number: 2 (lower is better) Translates to: QGLASGLLPLATDSSSPCGGCLG*GFSLGS Trigger: AGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACC...ACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGAAGCCAACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTGGAGGAGGGTCAGGCTCGCTGGTGGCTGCCTaGGCTGGGGTTTCAGTCTTG | + |
Preference number: 2 (lower is better) Translates to: GAHSKTEPNRRSCGGGSGSLVAA*AGVSVL Trigger: CAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGA...GCCTGACCCTCCTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TACCAGCACACAGCTGCCATCCCTCGAGCCACAGTGCCTGGTCCTAAGGACCCATCGCTGGTGGCTGCCTaGGCTGGGGTTTCAGTCTTG | + |
Preference number: 2 (lower is better) Translates to: YQHTAAIPRATVPGPKDPSLVAA*AGVSVL Trigger: CAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGA...TGGGTCCTTAGGACCAGGCACTGTGGCTCGAGGGATGGCAGCTGTGTGCTGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGAGAAGGCCCAGTCAGGAGGGGCACATTCCAAGACAGAGCCAAACAGGAGGAACAGTCTCTAAGGAGTaGGGGCTGGTGGGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: GRRPSQEGHIPRQSQTGGTVSKE*GLVGRQ Trigger: CTGCCTCCCCACCAGCCCCCACTCCTTAGAGACTGT...TCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCCTCCTGACTGGGCCTTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCAAAGTCCCCACAGTCTCTAAGGAGTaGGGGCTGGTGGGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: GVVQRSSTWATGEGTKVPTVSKE*GLVGRQ Trigger: CTGCCTCCCCACCAGCCCCCACTCCTTAGAGACTGT...GGGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTGGAGGAGGGTCAGGCGAGGAGGGTCAGGCCTaGAACAAGTCATGCCTGGCT | + |
Preference number: 2 (lower is better) Translates to: GAHSKTEPNRRSCGGGSGEEGQA*NKSCLA Trigger: AGCCAGGCATGACTTGTTCCAGGCCTGACCCTCCTC...GCCTGACCCTCCTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GAGGACTTGGTGGCCCCGTGCCTTGCCATCTGGCTGAGAAGAGAACCAGACCCTGCACCTGACCCAGTGTaGAGTGCAGAATGTGGCTGG | + |
Preference number: 2 (lower is better) Translates to: EDLVAPCLAIWLRREPDPAPDPV*SAECGW Trigger: CCAGCCACATTCTGCACTCCACACTGGGTCAGGTGC...AGGGTCTGGTTCTCTTCTCAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR TCA 90 bp | ACTGCACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGGGTCCAGCCACATCCTaGCCCTTGGGTCTCTGTGTT | + |
Preference number: 2 (lower is better) Translates to: TAPMSLAQPCLPCLATHLGPATS*PLGLCV Trigger: AACACAGAGACCCAAGGGTCAGGATGTGGCTGGACC...CAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | CCCAGTCAGGAGGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTGGAGAAAGACCAGGAGCCCTaGCCACAGGGAGAAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: PSQEGHIPRQSQTGGAVEKDQEP*PQGEAH Trigger: GTGAGCTTCTCCCTGTGGGCAGGGCTCCTGGTCTTT...CTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCCTCCTGACTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTGGAGGAGGGTCAGGCAATGGCCTGTGTACATaGGAGGGAATCCCCAGGGCT | + |
Preference number: 2 (lower is better) Translates to: GAHSKTEPNRRSCGGGSGNGLCT*EGIPRA Trigger: AGCCCTGGGGATTCCCTCCCATGTACACAGGCCATT...GCCTGACCCTCCTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGAACAGGTCCAGCCACATCCTGACCCTTGGGTCTCTGTGTTCTTGGGAGAAGGGTGGCTGCCTGGGCTaGGGTTTCAGTCTTGGGTCT | + |
Preference number: 2 (lower is better) Translates to: GNRSSHILTLGSLCSWEKGGCLG*GFSLGS Trigger: AGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACC...CTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTGTTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGAACAGGTCCAGCCACATCCTGACCCTTGGGTCTCTGTGTTCTTGGGAGAAGTGTGACTCTCGCTGGTaGCTGCCTGGGCTGGGGTTT | + |
Preference number: 2 (lower is better) Translates to: GNRSSHILTLGSLCSWEKCDSRW*LPGLGF Trigger: AAACCCCAGCCCAGGCAGCCACCAGCGAGAGTCACA...CTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTGTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCAAAGTCCCCATCGAGTGTGACTCTCGCTGGTaGCTGCCTGGGCTGGGGTTT | + |
Preference number: 2 (lower is better) Translates to: VQRSSTWATGEGTKVPIECDSRW*LPGLGF Trigger: AAACCCCAGCCCAGGCAGCCACCAGCGAGAGTCACA...CTCGATGGGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCTCCAAATGTGACTCTCGCTGGTaGCTGCCTGGGCTGGGGTTT | + |
Preference number: 2 (lower is better) Translates to: PCPWLSHVCPVLLHTCSKCDSRW*LPGLGF Trigger: AAACCCCAGCCCAGGCAGCCACCAGCGAGAGTCACA...TTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGAGAAGGCCCAGTCAGGAGGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGGGAAGATGGAGCACTaGCCAAAGGAATCGGGGCAC | + |
Preference number: 2 (lower is better) Translates to: GRRPSQEGHIPRQSQTGGGKMEH*PKESGH Trigger: GTGCCCCGATTCCTTTGGCCAGTGCTCCATCTTCCC...TCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCCTCCTGACTGGGCCTTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TGCCTGCCACCCTCTCAGGTCAGTGTGCAGACCTCACAGTTTTCTAGCCACAGCACAGTCTCTAAGGAGTaGGGGCTGGTGGGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: CLPPSQVSVQTSQFSSHSTVSKE*GLVGRQ Trigger: CTGCCTCCCCACCAGCCCCCACTCCTTAGAGACTGT...GCTGTGGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CATGAGACACGGCTGCTCACAGGTCCCTTTGAGTGGCTGTGGCAAGTACTCACCACAGTCTCTAAGGAGTaGGGGCTGGTGGGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: HETRLLTGPFEWLWQVLTTVSKE*GLVGRQ Trigger: CTGCCTCCCCACCAGCCCCCACTCCTTAGAGACTGT...GGTGAGTACTTGCCACAGCCACTCAAAGGGACCTGTGAGCAGCCGTGTCTCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TACCAGCACACAGCTGCCATCCCTCGAGCCACAGTGCCTGGTCCTAAGGACCCACAGAGAAGTTCTACATaGGCCACTGGAGAGGGGACC | + |
Preference number: 2 (lower is better) Translates to: YQHTAAIPRATVPGPKDPQRSST*ATGEGT Trigger: GGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTG...TGGGTCCTTAGGACCAGGCACTGTGGCTCGAGGGATGGCAGCTGTGTGCTGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCTCCAAAGCAGGGGTTGGCTTCTaGCCTCCTTCCTTTGGCCAC | + |
Preference number: 2 (lower is better) Translates to: PCPWLSHVCPVLLHTCSKAGVGF*PPSFGH Trigger: GTGGCCAAAGGAAGGAGGCCAGAAGCCAACCCCTGC...TTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TACAGGAGACGCCTGAGGACAGTGCTCCCGTTCCTTTCCTTCCACATGGTGCCTGGGGTGCGGGTGAGGTaGAGAACACACCACCGTCTT | + |
Preference number: 2 (lower is better) Translates to: YRRRLRTVLPFLSFHMVPGVRVR*RTHHRL Trigger: AAGACGGTGGTGTGTTCTCCACCTCACCCGCACCCC...AGGCACCATGTGGAAGGAAAGGAACGGGAGCACTGTCCTCAGGCGTCTCCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | GGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTGGAGGAGGGTCAGGCGGTGGTAAGCCCCTGTaGCCTGCACAGAAAGATTTG | + |
Preference number: 2 (lower is better) Translates to: GAHSKTEPNRRSCGGGSGGGKPL*PAQKDL Trigger: CAAATCTTTCTGTGCAGGGCACAGGGGCTTACCACC...GCCTGACCCTCCTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | TACCAGCACACAGCTGCCATCCCTCGAGCCACAGTGCCTGGTCCTAAGGACCCAGGTGGTAAGCCCCTGTaGCCTGCACAGAAAGATTTG | + |
Preference number: 2 (lower is better) Translates to: YQHTAAIPRATVPGPKDPGGKPL*PAQKDL Trigger: CAAATCTTTCTGTGCAGGGCACAGGGGCTTACCACC...TGGGTCCTTAGGACCAGGCACTGTGGCTCGAGGGATGGCAGCTGTGTGCTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | AGGCACCGTGCTGCCGCCATGCTCCCAGGGCAGCATCTGCCTTCCACGGCTGTGTTTCCTTCCACATGGTaGCTCCTGCATCAAATACTA | + |
Preference number: 2 (lower is better) Translates to: RHRAAAMLPGQHLPSTAVFPSTW*LLHQIL Trigger: TAGTATTTGATGCAGGAGGCACCATGTGGAAGGAAA...CACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TGTGCCTGCCACCCTCTCAGGTCAGTGTGCAGACCTCACAGTTTTCTAGCCACATGTGACTCTCGCTGGTaGCTGCCTGGGCTGGGGTTT | + |
Preference number: 2 (lower is better) Translates to: CACHPLRSVCRPHSFLATCDSRW*LPGLGF Trigger: AAACCCCAGCCCAGGCAGCCACCAGCGAGAGTCACA...TGTGGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGAACAGGTCCAGCCACATCCTGACCCTTGGGTCTCTGTGTTCTTGGGAGAAGGGGAAGATGGAGCACTaGCCAAAGGAATCGGGGCAC | + |
Preference number: 2 (lower is better) Translates to: GNRSSHILTLGSLCSWEKGKMEH*PKESGH Trigger: GTGCCCCGATTCCTTTGGCCAGTGCTCCATCTTCCC...CTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TACCAGCACACAGCTGCCATCCCTCGAGCCACAGTGCCTGGTCCTAAGGACCCACTAGGCTGGGGAAGATaGAGCACTGGCCAAAGGAAT | + |
Preference number: 2 (lower is better) Translates to: YQHTAAIPRATVPGPKDPLGWGR*STGQRN Trigger: ATTCCTTTGGCCAGTGCTCCATCTTCCCCAGCCTAG...TGGGTCCTTAGGACCAGGCACTGTGGCTCGAGGGATGGCAGCTGTGTGCTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TGCCTGCCACCCTCTCAGGTCAGTGTGCAGACCTCACAGTTTTCTAGCCACAGCGAGGAGGGTCAGGCCTaGAACAAGTCATGCCTGGCT | + |
Preference number: 2 (lower is better) Translates to: CLPPSQVSVQTSQFSSHSEEGQA*NKSCLA Trigger: AGCCAGGCATGACTTGTTCCAGGCCTGACCCTCCTC...GCTGTGGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CAGGTCCAGCCACATCCTGACCCTTGGGTCTCTGTGTTCTTGGGAGAAGGCCCACAGAGAAGTTCTACATaGGCCACTGGAGAGGGGACC | + |
Preference number: 2 (lower is better) Translates to: QVQPHPDPWVSVFLGEGPQRSST*ATGEGT Trigger: GGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTG...TGGGCCTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | ACTGCACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGAGTGCAGAATGTGGCTaGAAGCCCGCCTCACTGTCA | + |
Preference number: 2 (lower is better) Translates to: TAPMSLAQPCLPCLATHLSAECG*KPASLS Trigger: TGACAGTGAGGCGGGCTTCCAGCCACATTCTGCACT...CAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCTCCAAAGGGAATCCCCAGGGCTaGGAGTGGGGCAGCATTTAT | + |
Preference number: 2 (lower is better) Translates to: PCPWLSHVCPVLLHTCSKGNPQG*EWGSIY Trigger: ATAAATGCTGCCCCACTCCCAGCCCTGGGGATTCCC...TTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | ATCCTGACTGCGCACATCCCATCTCCGCATGTGTACGCATCTGTACCAGCACACAAAGACCAGGAGCCCTaGCCACAGGGAGAAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: ILTAHIPSPHVYASVPAHKDQEP*PQGEAH Trigger: GTGAGCTTCTCCCTGTGGGCAGGGCTCCTGGTCTTT...GTGTGCTGGTACAGATGCGTACACATGCGGAGATGGGATGTGCGCAGTCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCTCCAAAAATGGCCTGTGTACATaGGAGGGAATCCCCAGGGCT | + |
Preference number: 2 (lower is better) Translates to: PCPWLSHVCPVLLHTCSKNGLCT*EGIPRA Trigger: AGCCCTGGGGATTCCCTCCCATGTACACAGGCCATT...TTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CCCAGTCAGGAGGGGCACATTCCAAGACAGAGCCAAACAGGAGGAGCTGTGGAGCCTGTGTACTGGAGATaGGGAGCCATGTTGACAGTG | + |
Preference number: 2 (lower is better) Translates to: PSQEGHIPRQSQTGGAVEPVYWR*GAMLTV Trigger: CACTGTCAACATGGCTCCCCATCTCCAGTACACAGG...CTCCACAGCTCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCCTCCTGACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | ACCTGCTCCAAAGATGACCTCTTGACAAGAGCTCCACTAGGCCTTAGGGGGTCCGGGAAGATGGAGCACTaGCCAAAGGAATCGGGGCAC | + |
Preference number: 2 (lower is better) Translates to: TCSKDDLLTRAPLGLRGSGKMEH*PKESGH Trigger: GTGCCCCGATTCCTTTGGCCAGTGCTCCATCTTCCC...GGACCCCCTAAGGCCTAGTGGAGCTCTTGTCAAGAGGTCATCTTTGGAGCAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GGGAGAAGGCCCAGTCAGGAGGGGCACATTCCAAGACAGAGCCAAACAGGAGGACTAGGCTGGGGAAGATaGAGCACTGGCCAAAGGAAT | + |
Preference number: 2 (lower is better) Translates to: GRRPSQEGHIPRQSQTGGLGWGR*STGQRN Trigger: ATTCCTTTGGCCAGTGCTCCATCTTCCCCAGCCTAG...TCCTCCTGTTTGGCTCTGTCTTGGAATGTGCCCCTCCTGACTGGGCCTTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | GAATCATGTGGCCTGTGGCCGTGCTGGAGAGTCAGGTTGAACGCAGGCATTCTAGAGGAGGGTCAGGCCTaGAACAAGTCATGCCTGGCT | + |
Preference number: 2 (lower is better) Translates to: ESCGLWPCWRVRLNAGILEEGQA*NKSCLA Trigger: AGCCAGGCATGACTTGTTCCAGGCCTGACCCTCCTC...TAGAATGCCTGCGTTCAACCTGACTCTCCAGCACGGCCACAGGCCACATGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | ACTGCACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCCACATCCTGACCCTTaGGTCTCTGTGTTCTTGGGA | + |
Preference number: 2 (lower is better) Translates to: TAPMSLAQPCLPCLATHLPHPDP*VSVFLG Trigger: TCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGG...CAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | AGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCAAAGTCCCCAGAGAAGTTCTACATaGGCCACTGGAGAGGGGACC | + |
Preference number: 2 (lower is better) Translates to: RCGPEKFYMGHWRGDQSPQRSST*ATGEGT Trigger: GGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTG...GGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR TCA 90 bp | TGTGCCTGCCACCCTCTCAGGTCAGTGTGCAGACCTCACAGTTTTCTAGCCACACTGCACAGAAAGATTTaGGGCCCTGTCTGTGTGCCC | + |
Preference number: 2 (lower is better) Translates to: CACHPLRSVCRPHSFLATLHRKI*GPVCVP Trigger: GGGCACACAGACAGGGCCTCAAATCTTTCTGTGCAG...TGTGGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR TCA 90 bp | ATCCTGACTGCGCACATCCCATCTCCGCATGTGTACGCATCTGTACCAGCACACCTGCACAGAAAGATTTaGGGCCCTGTCTGTGTGCCC | + |
Preference number: 2 (lower is better) Translates to: ILTAHIPSPHVYASVPAHLHRKI*GPVCVP Trigger: GGGCACACAGACAGGGCCTCAAATCTTTCTGTGCAG...GTGTGCTGGTACAGATGCGTACACATGCGGAGATGGGATGTGCGCAGTCAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | AGCATACTGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAACTCTCGCTGGTGGCTaGCTGGGCTGGGGTTTCAGT | + |
Preference number: 2 (lower is better) Translates to: SILGTRCGPEKFYMGHWRTLAGG*LGWGFS Trigger: ACTGAAACCCCAGCCCAGGCAGCCACCAGCGAGAGT...TCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCAGTATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | AGCATACTGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGTGGCTGCCTGGGCTaGGGTTTCAGTCTTGGGTCT | + |
Preference number: 2 (lower is better) Translates to: SILGTRCGPEKFYMGHWRGGCLG*GFSLGS Trigger: AGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACC...TCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCAGTATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | AGCATACTGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGATCGCTGGTGGCTGCCTaGGCTGGGGTTTCAGTCTTG | + |
Preference number: 2 (lower is better) Translates to: SILGTRCGPEKFYMGHWRSLVAA*AGVSVL Trigger: CAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGA...TCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCAGTATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | AGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCAAAGTCCCCTAGGCTGGGGAAGATaGAGCACTGGCCAAAGGAAT | + |
Preference number: 2 (lower is better) Translates to: RCGPEKFYMGHWRGDQSPLGWGR*STGQRN Trigger: ATTCCTTTGGCCAGTGCTCCATCTTCCCCAGCCTAG...GGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 90 bp | TCTCTACTGCACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTaGCTACACACCTGCTCCAAAGATGACCTCTTGACAAGAGCTCCA | + |
Preference number: 2 (lower is better) Translates to: SLLHPCPWLSHVCPV*LHTCSKDDLLTRAP Trigger: TGGAGCTCTTGTCAAGAGGTCATCTTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGTAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | AGGACCATTTCTACCTTCTGTAAAAGAACACCTGTTTGGGGTTGCGTGCGGCTTAGCAGCCCCTGTGCCTaGCACCCTCTCAGGTCAGTG | + |
Preference number: 2 (lower is better) Translates to: RTISTFCKRTPVWGCVRLSSPCA*HPLRSV Trigger: CACTGACCTGAGAGGGTGGCAGGCACAGGGGCTGCT...AAGCCGCACGCAACCCCAAACAGGTGTTCTTTTACAGAAGGTAGAAATGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | GTGCACGTAGTAGCCAGTGATGTAACCCAGGATGAAGATGATCCAGAAGAGGGCTGGCTATCCCCAGCTTaGCAGAGCACAGCTTCTGGG | + |
Preference number: 2 (lower is better) Translates to: VHVVASDVTQDEDDPEEGWLSPA*QSTASG Trigger: CCCAGAAGCTGTGCTCTGGCAAGCTGGGGATAGCCA...GCCCTCTTCTGGATCATCTTCATCCTGGGTTACATCACTGGCTACTACGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TGTGCCTGCCACCCTCTCAGGTCAGTGTGCAGACCTCACAGTTTTCTAGCCACACCTGTGTACTGGAGATaGGGAGCCATGTTGACAGTG | + |
Preference number: 2 (lower is better) Translates to: CACHPLRSVCRPHSFLATPVYWR*GAMLTV Trigger: CACTGTCAACATGGCTCCCCATCTCCAGTACACAGG...TGTGGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TCAGTTGGAGTAGCTCTACTGCAATCTCCCACACAAGGACCACTGAAGCTTAGGGGTGGCTGCCTGGGCTaGGGTTTCAGTCTTGGGTCT | + |
Preference number: 2 (lower is better) Translates to: SVGVALLQSPTQGPLKLRGGCLG*GFSLGS Trigger: AGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACC...CCTAAGCTTCAGTGGTCCTTGTGTGGGAGATTGCAGTAGAGCTACTCCAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TCAGTTGGAGTAGCTCTACTGCAATCTCCCACACAAGGACCACTGAAGCTTAGGTCGCTGGTGGCTGCCTaGGCTGGGGTTTCAGTCTTG | + |
Preference number: 2 (lower is better) Translates to: SVGVALLQSPTQGPLKLRSLVAA*AGVSVL Trigger: CAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGA...CCTAAGCTTCAGTGGTCCTTGTGTGGGAGATTGCAGTAGAGCTACTCCAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CACGTAGTAGCCAGTGATGTAACCCAGGATGAAGATGATCCAGAAGAGGGCCACCACCCAGCACCTTCATaGCTATCCCCAGCTTGCCAG | + |
Preference number: 2 (lower is better) Translates to: HVVASDVTQDEDDPEEGHHPAPS*LSPACQ Trigger: CTGGCAAGCTGGGGATAGCCATGAAGGTGCTGGGTG...GTGGCCCTCTTCTGGATCATCTTCATCCTGGGTTACATCACTGGCTACTACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
3UTR-3UTR TCA 90 bp | TCCAAAGATGACCTCTTGACAAGAGCTCCACTAGGCCTTAGGGGGTCCTTCACTCTGCACAGAAAGATTTaGGGCCCTGTCTGTGTGCCC | + |
Preference number: 2 (lower is better) Translates to: SKDDLLTRAPLGLRGSFTLHRKI*GPVCVP Trigger: GGGCACACAGACAGGGCCTCAAATCTTTCTGTGCAG...AGTGAAGGACCCCCTAAGGCCTAGTGGAGCTCTTGTCAAGAGGTCATCTTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR TCA 90 bp | CATGAGACACGGCTGCTCACAGGTCCCTTTGAGTGGCTGTGGCAAGTACTCACCAGCCCAGCCCAGGTGTaGGATTCATTGAGATTTTTG | + |
Preference number: 2 (lower is better) Translates to: HETRLLTGPFEWLWQVLTSPAQV*DSLRFL Trigger: CAAAAATCTCAATGAATCTCACACCTGGGCTGGGCT...GGTGAGTACTTGCCACAGCCACTCAAAGGGACCTGTGAGCAGCCGTGTCTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | TACCAGCACACAGCTGCCATCCCTCGAGCCACAGTGCCTGGTCCTAAGGACCCATTTCCTTCCACATGGTaGCTCCTGCATCAAATACTA | + |
Preference number: 2 (lower is better) Translates to: YQHTAAIPRATVPGPKDPFPSTW*LLHQIL Trigger: TAGTATTTGATGCAGGAGGCACCATGTGGAAGGAAA...TGGGTCCTTAGGACCAGGCACTGTGGCTCGAGGGATGGCAGCTGTGTGCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | TCAGTTGGAGTAGCTCTACTGCAATCTCCCACACAAGGACCACTGAAGCTTAGGTGGCTATCCCCAGCTTaGCAGAGCACAGCTTCTGGG | + |
Preference number: 2 (lower is better) Translates to: SVGVALLQSPTQGPLKLRWLSPA*QSTASG Trigger: CCCAGAAGCTGTGCTCTGGCAAGCTGGGGATAGCCA...CCTAAGCTTCAGTGGTCCTTGTGTGGGAGATTGCAGTAGAGCTACTCCAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TCAGTTGGAGTAGCTCTACTGCAATCTCCCACACAAGGACCACTGAAGCTTAGGCTGGCCTCCTTCCTTTaGCCACTGATAGCAGCAGCC | + |
Preference number: 2 (lower is better) Translates to: SVGVALLQSPTQGPLKLRLASFL*PLIAAA Trigger: GGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAG...CCTAAGCTTCAGTGGTCCTTGTGTGGGAGATTGCAGTAGAGCTACTCCAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 90 bp | TTTCAGTCTTGGGTCTACCCTGTGTACTGGAGATGGGGAGCCATGTaGACAGTGCACACTGGCATCTTCATATGCCCTGGGGTCTGTATG | + |
Preference number: 2 (lower is better) Translates to: FQSWVYPVYWRWGAM*TVHTGIFICPGVCM Trigger: CATACAGACCCCAGGGCATATGAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | ATCCTGACTGCGCACATCCCATCTCCGCATGTGTACGCATCTGTACCAGCACACCCACATGGTGCCTCCTaGATCAAATACTACTCCTTC | + |
Preference number: 2 (lower is better) Translates to: ILTAHIPSPHVYASVPAHPHGAS*IKYYSF Trigger: GAAGGAGTAGTATTTGATGCAGGAGGCACCATGTGG...GTGTGCTGGTACAGATGCGTACACATGCGGAGATGGGATGTGCGCAGTCAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | ACTGCACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGTTTCCTTCCACATGGTaGCTCCTGCATCAAATACTA | + |
Preference number: 2 (lower is better) Translates to: TAPMSLAQPCLPCLATHLFPSTW*LLHQIL Trigger: TAGTATTTGATGCAGGAGGCACCATGTGGAAGGAAA...CAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CATGTTGACAGTGCACACTGGCATCTTCATATGCCCTGGGGTCTGTATGGAGGACCTGTGTACTGGAGATaGGGAGCCATGTTGACAGTG | + |
Preference number: 2 (lower is better) Translates to: HVDSAHWHLHMPWGLYGGPVYWR*GAMLTV Trigger: CACTGTCAACATGGCTCCCCATCTCCAGTACACAGG...TCCTCCATACAGACCCCAGGGCATATGAAGATGCCAGTGTGCACTGTCAACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | AGCATACTGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGACTAGGCTGGGGAAGATaGAGCACTGGCCAAAGGAAT | + |
Preference number: 2 (lower is better) Translates to: SILGTRCGPEKFYMGHWRLGWGR*STGQRN Trigger: ATTCCTTTGGCCAGTGCTCCATCTTCCCCAGCCTAG...TCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCAGTATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | ATAGGAGCCACAGTCGTTATTCAGGGCCCATCCTGCACAACCAGGAATCTGGAACTAGGCTGGGGAAGATaGAGCACTGGCCAAAGGAAT | + |
Preference number: 2 (lower is better) Translates to: IGATVVIQGPSCTTRNLELGWGR*STGQRN Trigger: ATTCCTTTGGCCAGTGCTCCATCTTCCCCAGCCTAG...TTCCAGATTCCTGGTTGTGCAGGATGGGCCCTGAATAACGACTGTGGCTCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CGTGTAGTCCTTTGTAGTCAGACAGATGCTTCGTGGACTGTGCCTCACACATGGCCACATCCTGACCCTTaGGTCTCTGTGTTCTTGGGA | + |
Preference number: 2 (lower is better) Translates to: RVVLCSQTDASWTVPHTWPHPDP*VSVFLG Trigger: TCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGG...CCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGACTACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | AGCATACTGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGACCACATCCTGACCCTTaGGTCTCTGTGTTCTTGGGA | + |
Preference number: 2 (lower is better) Translates to: SILGTRCGPEKFYMGHWRPHPDP*VSVFLG Trigger: TCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGG...TCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCAGTATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CTTGTGCACGTAGTAGCCAGTGATGTAACCCAGGATGAAGATGATCCAGAAGAGCACCCAGCACCTTCATaGCTATCCCCAGCTTGCCAG | + |
Preference number: 2 (lower is better) Translates to: LVHVVASDVTQDEDDPEEHPAPS*LSPACQ Trigger: CTGGCAAGCTGGGGATAGCCATGAAGGTGCTGGGTG...CTCTTCTGGATCATCTTCATCCTGGGTTACATCACTGGCTACTACGTGCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | TCAGTTGGAGTAGCTCTACTGCAATCTCCCACACAAGGACCACTGAAGCTTAGGGGTGGTAAGCCCCTGTaGCCTGCACAGAAAGATTTG | + |
Preference number: 2 (lower is better) Translates to: SVGVALLQSPTQGPLKLRGGKPL*PAQKDL Trigger: CAAATCTTTCTGTGCAGGGCACAGGGGCTTACCACC...CCTAAGCTTCAGTGGTCCTTGTGTGGGAGATTGCAGTAGAGCTACTCCAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | CGTGTAGTCCTTTGTAGTCAGACAGATGCTTCGTGGACTGTGCCTCACACATGGCAATTCACAGCATACTaGGAACAAGGTGTGGTCCAG | + |
Preference number: 2 (lower is better) Translates to: RVVLCSQTDASWTVPHTWQFTAY*EQGVVQ Trigger: CTGGACCACACCTTGTTCCCAGTATGCTGTGAATTG...CCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGACTACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CCA 90 bp | TCAGTTGGAGTAGCTCTACTGCAATCTCCCACACAAGGACCACTGAAGCTTAGGCAATTCACAGCATACTaGGAACAAGGTGTGGTCCAG | + |
Preference number: 2 (lower is better) Translates to: SVGVALLQSPTQGPLKLRQFTAY*EQGVVQ Trigger: CTGGACCACACCTTGTTCCCAGTATGCTGTGAATTG...CCTAAGCTTCAGTGGTCCTTGTGTGGGAGATTGCAGTAGAGCTACTCCAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR GCA 90 bp | CGTGTAGTCCTTTGTAGTCAGACAGATGCTTCGTGGACTGTGCCTCACACATGGTTTCCTTCCACATGGTaGCTCCTGCATCAAATACTA | + |
Preference number: 2 (lower is better) Translates to: RVVLCSQTDASWTVPHTWFPSTW*LLHQIL Trigger: TAGTATTTGATGCAGGAGGCACCATGTGGAAGGAAA...CCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGACTACACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 90 bp | GGATGTTCTGAATCATGTGGCCTGTGGCCGTGCTGGAGAGTCAGGTaGAACGCAGGCATTCTATTGAACAGTATTTATTTTTCTACAACA | + |
Preference number: 2 (lower is better) Translates to: GCSESCGLWPCWRVR*NAGILLNSIYFSTT Trigger: TGTTGTAGAAAAATAAATACTGTTCAATAGAATGCCTGCGTTCAACCTGACTCTCCAGCACGGCCACAGGCCACATGATTCAGAACATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | CCGCCTTGCGATGCCCGCCTTGCGGCAGCTCAGGACTaGGGGGTGCGGGTGAGGTGGAGAACACACCACCGT | + |
Preference number: 3 (lower is better) Translates to: PPCDARLAAAQD*GVRVRWRTHHR Trigger: ACGGTGGTGTGTTCTCCACCTCACCCGCACCCCCCAGTCCTGAGCTGCCGCAAGGCGGGCATCGCAAGGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GTGAGCCCACACCAACGATACGGGGAGGTTCCCGAGTaGGCATGGGTGGGGAAGCGGCGGGCTAGATCGGGA | + |
Preference number: 3 (lower is better) Translates to: VSPHQRYGEVPE*AWVGKRRARSG Trigger: TCCCGATCTAGCCCGCCGCTTCCCCACCCATGCCCACTCGGGAACCTCCCCGTATCGTTGGTGTGGGCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GCTGCCAGGAGTGGGCTGGGAGCACCTGACCCAGTGTaGAGTGCAGAATGTGGCTGGAAGCCCGCCTCACTG | + |
Preference number: 3 (lower is better) Translates to: AARSGLGAPDPV*SAECGWKPASL Trigger: CAGTGAGGCGGGCTTCCAGCCACATTCTGCACTCCACACTGGGTCAGGTGCTCCCAGCCCACTCCTGGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GCTAGGGACGGGCCTAGGCTGGGGAAGATGGAGCACTaGCCAAAGGAATCGGGGCACAAAGCCCAACCTGGG | + |
Preference number: 3 (lower is better) Translates to: ARDGPRLGKMEH*PKESGHKAQPG Trigger: CCCAGGTTGGGCTTTGTGCCCCGATTCCTTTGGCCAGTGCTCCATCTTCCCCAGCCTAGGCCCGTCCCTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GGGAGAAGCAGGGGTTGGCTTCTGGCCTCCTTCCTTTaGCCACTGATAGCAGCAGCCCCTGTGCCTGCCACC | + |
Preference number: 3 (lower is better) Translates to: GRSRGWLLASFL*PLIAAAPVPAT Trigger: GGTGGCAGGCACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGAAGCCAACCCCTGCTTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GGAGCACCTGACCCAGTGTGGAGTGCAGAATGTGGCTaGAAGCCCGCCTCACTGTCAGCCCGGGACTACAGG | + |
Preference number: 3 (lower is better) Translates to: GAPDPVWSAECG*KPASLSARDYR Trigger: CCTGTAGTCCCGGGCTGACAGTGAGGCGGGCTTCCAGCCACATTCTGCACTCCACACTGGGTCAGGTGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | ACCAACGATACGGGGAGGTTCCCGAGTGGGCATGGGTaGGGAAGCGGCGGGCTAGATCGGGAAAAGATGGGC | + |
Preference number: 3 (lower is better) Translates to: TNDTGRFPSGHG*GSGGLDREKMG Trigger: GCCCATCTTTTCCCGATCTAGCCCGCCGCTTCCCCACCCATGCCCACTCGGGAACCTCCCCGTATCGTTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | GGACCCAGCAGCTGCACAGAGGACTTGGTGGCCCCGTGCCTTGCCATCTGGCTGTCTGGCCTCCTTCCTTaGGCCACTGATAGCAGCAGC | + |
Preference number: 3 (lower is better) Translates to: GPSSCTEDLVAPCLAIWLSGLLP*ATDSSS Trigger: GCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGA...CAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTGTGCAGCTGCTGGGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 72 bp | CCGCCTCACTGTCAGCCCGGGACTACAGGAGACGCCTaGGGACAGTGCTCCCGTTCCTTTCCTTCCACATGG | + |
Preference number: 3 (lower is better) Translates to: PPHCQPGTTGDA*GQCSRSFPSTW Trigger: CCATGTGGAAGGAAAGGAACGGGAGCACTGTCCTCAGGCGTCTCCTGTAGTCCCGGGCTGACAGTGAGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 72 bp | CAGAGGACTTGGTGGCCCCGTGCCTTGCCATCTGGCTaGGAAGAGAACCAGACCCTCAGCCTTCCCCCTCGA | + |
Preference number: 3 (lower is better) Translates to: QRTWWPRALPSG*EENQTLSLPPR Trigger: TCGAGGGGGAAGGCTGAGGGTCTGGTTCTCTTCTCAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | AGCAGCCCCTGTGCCTGCCACCCTCTCAGGTCAGTGTaGAGACCTCACAGTTTTCTAGCCACAGCCCGCCAG | + |
Preference number: 3 (lower is better) Translates to: SSPCACHPLRSV*RPHSFLATARQ Trigger: CTGGCGGGCTGTGGCTAGAAAACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCACAGGGGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | CAGCAGCTGCACAGAGGACTTGGTGGCCCCGTGCCTTaGCATCTGGCTGAGAAGAGAACCAGACCCTCAGCC | + |
Preference number: 3 (lower is better) Translates to: QQLHRGLGGPVP*HLAEKRTRPSA Trigger: GGCTGAGGGTCTGGTTCTCTTCTCAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTGTGCAGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | GGACCCAGCAGCTGCACAGAGGACTTGGTGGCCCCGTaGCTTGCCATCTGGCTGAGAAGAGAACCAGACCCT | + |
Preference number: 3 (lower is better) Translates to: GPSSCTEDLVAP*LAIWLRREPDP Trigger: AGGGTCTGGTTCTCTTCTCAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTGTGCAGCTGCTGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | TGCACAGAGGACTTGGTGGCCCCGTGCCTTGCCATCTaGCTGAGAAGAGAACCAGACCCTCAGCCTTCCCCC | + |
Preference number: 3 (lower is better) Translates to: CTEDLVAPCLAI*LRREPDPQPSP Trigger: GGGGGAAGGCTGAGGGTCTGGTTCTCTTCTCAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTCTGTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | TCTCGCTGGTGGCTGCCTGGGCTGGGGTTTCAGTCTTaGGTCTACCCTGTGTACTGGAGATGGGGAGCCATG | + |
Preference number: 3 (lower is better) Translates to: SRWWLPGLGFQS*VYPVYWRWGAM Trigger: CATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | CCAGCCTGTGTGACTCTCGCTGGTGGCTGCCTGGGCTaGGGTTTCAGTCTTGGGTCTACCCTGTGTACTGGA | + |
Preference number: 3 (lower is better) Translates to: PACVTLAGGCLG*GFSLGSTLCTG Trigger: TCCAGTACACAGGGTAGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGAGAGTCACACAGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | CTGTGGAGGAGGGTCAGGCCTGGAACAAGTCATGCCTaGCTGGGCAGTGCTAGTGGAGAGAGTCTGTCACCC | + |
Preference number: 3 (lower is better) Translates to: LWRRVRPGTSHA*LGSASGESLSP Trigger: GGGTGACAGACTCTCTCCACTAGCACTGCCCAGCCAGGCATGACTTGTTCCAGGCCTGACCCTCCTCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | CTTCCTTTGGCCACTGATAGCAGCAGCCCCTGTGCCTaGCACCCTCTCAGGTCAGTGTGCAGACCTCACAGT | + |
Preference number: 3 (lower is better) Translates to: LPLATDSSSPCA*HPLRSVCRPHS Trigger: ACTGTGAGGTCTGCACACTGACCTGAGAGGGTGGCAGGCACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GTATGGAGGAGTGTCTGCACAAATGGCCTGTGTACATaGGAGGGAATCCCCAGGGCTGGGAGTGGGGCAGCA | + |
Preference number: 3 (lower is better) Translates to: VWRSVCTNGLCT*EGIPRAGSGAA Trigger: TGCTGCCCCACTCCCAGCCCTGGGGATTCCCTCCCATGTACACAGGCCATTTGTGCAGACACTCCTCCATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | TGCCCTGGGGTCTGTATGGAGGAGTGTCTGCACAAATaGCCTGTGTACATGGGAGGGAATCCCCAGGGCTGG | + |
Preference number: 3 (lower is better) Translates to: CPGVCMEECLHK*PVYMGGNPQGW Trigger: CCAGCCCTGGGGATTCCCTCCCATGTACACAGGCCATTTGTGCAGACACTCCTCCATACAGACCCCAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | CTTAGCCTAGTCTCCAGCCTGTGTGACTCTCGCTGGTaGCTGCCTGGGCTGGGGTTTCAGTCTTGGGTCTAC | + |
Preference number: 3 (lower is better) Translates to: LSLVSSLCDSRW*LPGLGFQSWVY Trigger: GTAGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGAGAGTCACACAGGCTGGAGACTAGGCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GCTCCCAGGGCAGCATCTGCCTTCCACGGCTGTGCTTaGAACTGTAGTGCTGGTCGTTGTTGGCACATCTGC | + |
Preference number: 3 (lower is better) Translates to: APRAASAFHGCA*NCSAGRCWHIC Trigger: GCAGATGTGCCAACAACGACCAGCACTACAGTTCCAAGCACAGCCGTGGAAGGCAGATGCTGCCCTGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | GAGGACTTGGTGGCCCCGTGCCTTGCCATCTGGCTGAGAAGAGAACCAGACCCTGCTGGGGTTTCAGTCTaGGGTCTACCCTGTGTACTG | + |
Preference number: 3 (lower is better) Translates to: EDLVAPCLAIWLRREPDPAGVSV*GLPCVL Trigger: CAGTACACAGGGTAGACCCAAGACTGAAACCCCAGC...AGGGTCTGGTTCTCTTCTCAGCCAGATGGCAAGGCACGGGGCCACCAAGTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | CAGGGGTTGGCTTCTGGCCTCCTTCCTTTGGCCACTGATAGCAGCAGCCCCTGTCCTGCACAGAAAGATTaGAGGCCCTGTCTGTGTGCC | + |
Preference number: 3 (lower is better) Translates to: QGLASGLLPLATDSSSPCPAQKD*RPCLCA Trigger: GGCACACAGACAGGGCCTCAAATCTTTCTGTGCAGG...ACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGAAGCCAACCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | ACTGCACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGGCTGGGGTTTCAGTCTaGGGTCTACCCTGTGTACTG | + |
Preference number: 3 (lower is better) Translates to: TAPMSLAQPCLPCLATHLAGVSV*GLPCVL Trigger: CAGTACACAGGGTAGACCCAAGACTGAAACCCCAGC...CAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | CATGGGCCACTGGAGAGGGGACCAAAGTCCCCATCGAGTCACAGTGCCCTTGTTGCTGGGGTTTCAGTCTaGGGTCTACCCTGTGTACTG | + |
Preference number: 3 (lower is better) Translates to: HGPLERGPKSPSSHSALVAGVSV*GLPCVL Trigger: CAGTACACAGGGTAGACCCAAGACTGAAACCCCAGC...AACAAGGGCACTGTGACTCGATGGGGACTTTGGTCCCCTCTCCAGTGGCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | CCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCTCCAAATCTGGCCTCCTTCCTTaGGCCACTGATAGCAGCAGC | + |
Preference number: 3 (lower is better) Translates to: PCPWLSHVCPVLLHTCSKSGLLP*ATDSSS Trigger: GCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGA...TTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 72 bp | TGGTCCAGTAAGGAGGGAACAGGTCCAGCCACATCCTaGCCCTTGGGTCTCTGTGTTCTTGGGAGAAGGCCC | + |
Preference number: 3 (lower is better) Translates to: WSSKEGTGPATS*PLGLCVLGRRP Trigger: GGGCCTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTGTTCCCTCCTTACTGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | TCCAGCCACATCCTGACCCTTGGGTCTCTGTGTTCTTaGGAGAAGGCCCAGTCAGGAGGGGCACATTCCAAG | + |
Preference number: 3 (lower is better) Translates to: SSHILTLGSLCS*EKAQSGGAHSK Trigger: CTTGGAATGTGCCCCTCCTGACTGGGCCTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GTAAGGAGGGAACAGGTCCAGCCACATCCTGACCCTTaGGTCTCTGTGTTCTTGGGAGAAGGCCCAGTCAGG | + |
Preference number: 3 (lower is better) Translates to: VRREQVQPHPDP*VSVFLGEGPVR Trigger: CCTGACTGGGCCTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTGTTCCCTCCTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | GTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCAAAGTCCCCATCGAGGCTGGGGTTTCAGTCTaGGGTCTACCCTGTGTACTG | + |
Preference number: 3 (lower is better) Translates to: VQRSSTWATGEGTKVPIEAGVSV*GLPCVL Trigger: CAGTACACAGGGTAGACCCAAGACTGAAACCCCAGC...CTCGATGGGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | AGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCAAAGTCCCCCTGCACAGAAAGATTaGAGGCCCTGTCTGTGTGCC | + |
Preference number: 3 (lower is better) Translates to: RCGPEKFYMGHWRGDQSPPAQKD*RPCLCA Trigger: GGCACACAGACAGGGCCTCAAATCTTTCTGTGCAGG...GGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | ACCTGCTCCAAAGATGACCTCTTGACAAGAGCTCCACTAGGCCTTAGGGGGTCCTCTGGCCTCCTTCCTTaGGCCACTGATAGCAGCAGC | + |
Preference number: 3 (lower is better) Translates to: TCSKDDLLTRAPLGLRGSSGLLP*ATDSSS Trigger: GCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGA...GGACCCCCTAAGGCCTAGTGGAGCTCTTGTCAAGAGGTCATCTTTGGAGCAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | CCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCTCCAAAACCGTCTTACCTCATTaGGAGCCTGTGAGTGGAGGG | + |
Preference number: 3 (lower is better) Translates to: PCPWLSHVCPVLLHTCSKTVLPH*EPVSGG Trigger: CCCTCCACTCACAGGCTCCAAATGAGGTAAGACGGT...TTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR TCA 72 bp | GGGTCTACCCTGTGTACTGGAGATGGGGAGCCATGTTaGCAGTGCACACTGGCATCTTCATATGCCCTGGGG | + |
Preference number: 3 (lower is better) Translates to: GSTLCTGDGEPC*QCTLASSYALG Trigger: CCCCAGGGCATATGAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | TGTAATCTTCTTAGAGCTTGTTTCCAGGCACCGTGCTaGCGCCATGCTCCCAGGGCAGCATCTGCCTTCCAC | + |
Preference number: 3 (lower is better) Translates to: CNLLRACFQAPC*RHAPRAASAFH Trigger: GTGGAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCTGGAAACAAGCTCTAAGAAGATTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | GAGTGTAATCTTCTTAGAGCTTGTTTCCAGGCACCGTaGTGCCGCCATGCTCCCAGGGCAGCATCTGCCTTC | + |
Preference number: 3 (lower is better) Translates to: ECNLLRACFQAP*CRHAPRAASAF Trigger: GAAGGCAGATGCTGCCCTGGGAGCATGGCGGCAGCACGGTGCCTGGAAACAAGCTCTAAGAAGATTACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | TGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCAAAGTCCCCATCCTGCACAGAAAGATTaGAGGCCCTGTCTGTGTGCC | + |
Preference number: 3 (lower is better) Translates to: CGPEKFYMGHWRGDQSPHPAQKD*RPCLCA Trigger: GGCACACAGACAGGGCCTCAAATCTTTCTGTGCAGG...ATGGGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | TCTCTACTGCACCCATGTCCCTGGCTCAGCCATGTCTaGCCTGTCTTGCTACACACCTGCTCCAAAGATGAC | + |
Preference number: 3 (lower is better) Translates to: SLLHPCPWLSHV*PVLLHTCSKDD Trigger: GTCATCTTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | ACAAGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTaGAGAGGGGACCAAAGTCCCCATCGAGTCACAGTG | + |
Preference number: 3 (lower is better) Translates to: TRCGPEKFYMGH*RGDQSPHRVTV Trigger: CACTGTGACTCGATGGGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | TACTGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATaGGCCACTGGAGAGGGGACCAAAGTCCCCATCGAG | + |
Preference number: 3 (lower is better) Translates to: YWEQGVVQRSST*ATGEGTKVPIE Trigger: CTCGATGGGGACTTTGGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GTCCGTGTAGTCCTTTGTAGTCAGACAGATGCTTCGTaGACTGTGCCTCACACATGGCCCTGCAGGCTCCAT | + |
Preference number: 3 (lower is better) Translates to: VRVVLCSQTDAS*TVPHTWPCRLH Trigger: ATGGAGCCTGCAGGGCCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGACTACACGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | AAATGGCCTGTGTACATGGGAGGGAATCCCCAGGGCTaGGAGTGGGGCAGCATTTATTTGCACTTGTGCACG | + |
Preference number: 3 (lower is better) Translates to: KWPVYMGGNPQG*EWGSIYLHLCT Trigger: CGTGCACAAGTGCAAATAAATGCTGCCCCACTCCCAGCCCTGGGGATTCCCTCCCATGTACACAGGCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | TGCATCAAATACTACTCCTTCCTGTCACCTCTCTACTaGACCCATGTCCCTGGCTCAGCCATGTCTGCCCTG | + |
Preference number: 3 (lower is better) Translates to: CIKYYSFLSPLY*THVPGSAMSAL Trigger: CAGGGCAGACATGGCTGAGCCAGGGACATGGGTGCAGTAGAGAGGTGACAGGAAGGAGTAGTATTTGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | TCTCCTGTCTCCTGTCCTCATGGATCACTCAGTAACTaGTGGGGATGTTCTGAATCATGTGGCCTGTGGCCG | + |
Preference number: 3 (lower is better) Translates to: SPVSCPHGSLSN*WGCSESCGLWP Trigger: CGGCCACAGGCCACATGATTCAGAACATCCCCAGCAGTTACTGAGTGATCCATGAGGACAGGAGACAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | GGGTTTCAGTCTTGGGTCTACCCTGTGTACTGGAGATaGGGAGCCATGTTGACAGTGCACACTGGCATCTTC | + |
Preference number: 3 (lower is better) Translates to: GFQSWVYPVYWR*GAMLTVHTGIF Trigger: GAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | CATGTTGACAGTGCACACTGGCATCTTCATATGCCCTGGGGTCTGTATGGAGGAGCTGGGGTTTCAGTCTaGGGTCTACCCTGTGTACTG | + |
Preference number: 3 (lower is better) Translates to: HVDSAHWHLHMPWGLYGGAGVSV*GLPCVL Trigger: CAGTACACAGGGTAGACCCAAGACTGAAACCCCAGC...TCCTCCATACAGACCCCAGGGCATATGAAGATGCCAGTGTGCACTGTCAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | CTACCTTCTGTAAAAGAACACCTGTTTGGGGTTGCGTaGGGCTTTCATCCTAAGGCCGTGCGAGAGCCGTTA | + |
Preference number: 3 (lower is better) Translates to: LPSVKEHLFGVA*GFHPKAVREPL Trigger: TAACGGCTCTCGCACGGCCTTAGGATGAAAGCCGCACGCAACCCCAAACAGGTGTTCTTTTACAGAAGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | TGCACACTGGCATCTTCATATGCCCTGGGGTCTGTATaGAGGAGTGTCTGCACAAATGGCCTGTGTACATGG | + |
Preference number: 3 (lower is better) Translates to: CTLASSYALGSV*RSVCTNGLCTW Trigger: CCATGTACACAGGCCATTTGTGCAGACACTCCTCCATACAGACCCCAGGGCATATGAAGATGCCAGTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CCA 72 bp | CACGGCTGTGCTTGGAACTGTAGTGCTGGTCGTTGTTaGCACATCTGCGCCTTGGCCAAGGAAGTTATCTAT | + |
Preference number: 3 (lower is better) Translates to: HGCAWNCSAGRC*HICALAKEVIY Trigger: ATAGATAACTTCCTTGGCCAAGGCGCAGATGTGCCAACAACGACCAGCACTACAGTTCCAAGCACAGCCGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | AGGACCATTTCTACCTTCTGTAAAAGAACACCTGTTTGGGGTTGCGTGCGGCTTACCGTCTTACCTCATTaGGAGCCTGTGAGTGGAGGG | + |
Preference number: 3 (lower is better) Translates to: RTISTFCKRTPVWGCVRLTVLPH*EPVSGG Trigger: CCCTCCACTCACAGGCTCCAAATGAGGTAAGACGGT...AAGCCGCACGCAACCCCAAACAGGTGTTCTTTTACAGAAGGTAGAAATGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR-3UTR CAA 90 bp | CGTGTAGTCCTTTGTAGTCAGACAGATGCTTCGTGGACTGTGCCTCACACATGGTCCAAAGATGACCTCTaGACAAGAGCTCCACTAGGC | + |
Preference number: 3 (lower is better) Translates to: RVVLCSQTDASWTVPHTWSKDDL*TRAPLG Trigger: GCCTAGTGGAGCTCTTGTCAAGAGGTCATCTTTGGA...CCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGACTACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | AAAATAGGAGCCACAGTCGTTATTCAGGGCCCATCCTaGACAACCAGGAATCTGGAAGGCCAAAAGACCAGG | + |
Preference number: 3 (lower is better) Translates to: KIGATVVIQGPS*TTRNLEGQKTR Trigger: CCTGGTCTTTTGGCCTTCCAGATTCCTGGTTGTGCAGGATGGGCCCTGAATAACGACTGTGGCTCCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR GCA 72 bp | AGTGCTCCCGTTCCTTTCCTTCCACATGGTGCCTCCTaGATCAAATACTACTCCTTCCTGTCACCTCTCTAC | + |
Preference number: 3 (lower is better) Translates to: SAPVPFLPHGAS*IKYYSFLSPLY Trigger: GTAGAGAGGTGACAGGAAGGAGTAGTATTTGATGCAGGAGGCACCATGTGGAAGGAAAGGAACGGGAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 72 bp | AGGGAGAAGCAGGGGTTGGCTTCTGGCCTCCTTCCTTaGGCCACTGATAGCAGCAGCCCCTGTGCCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: REKQGLASGLLP*ATDSSSPCACH Trigger: GTGGCAGGCACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAGAAGCCAACCCCTGCTTCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 72 bp | CTCTCGCTGGTGGCTGCCTGGGCTGGGGTTTCAGTCTaGGGTCTACCCTGTGTACTGGAGATGGGGAGCCAT | + |
Preference number: 4 (lower is better) Translates to: LSLVAAWAGVSV*GLPCVLEMGSH Trigger: ATGGCTCCCCATCTCCAGTACACAGGGTAGACCCAAGACTGAAACCCCAGCCCAGGCAGCCACCAGCGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
CDS-3UTR GCA 90 bp | ACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTTGCTACACACCTGCTCCATGGCTATCCCCAGCTTaGCAGAGCACAGCTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: THVPGSAMSALSCYTPAPWLSPA*QSTASG Trigger: CCCAGAAGCTGTGCTCTGGCAAGCTGGGGATAGCCA...TGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
CDS-3UTR GCA 90 bp | CCCAGGATGAAGATGATCCAGAAGAGGGCCACTCCACCCAGCACCTTCATGGCTCTATCTGCTCAAAGGTaGCGTGGGCACCTGGACGGG | + |
Preference number: 4 (lower is better) Translates to: PRMKMIQKRATPPSTFMALSAQR*RGHLDG Trigger: CCCGTCCAGGTGCCCACGGCACCTTTGAGCAGATAG...AGCCATGAAGGTGCTGGGTGGAGTGGCCCTCTTCTGGATCATCTTCATCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
CDS-3UTR CCA 90 bp | AGGAGTGTCTGCACAAATGGCCTGTGTACATGGGAGGGAATCCCCAGGGCTGGGCACCCAGCACCTTCATaGCTATCCCCAGCTTGCCAG | + |
Preference number: 4 (lower is better) Translates to: RSVCTNGLCTWEGIPRAGHPAPS*LSPACQ Trigger: CTGGCAAGCTGGGGATAGCCATGAAGGTGCTGGGTG...CCCAGCCCTGGGGATTCCCTCCCATGTACACAGGCCATTTGTGCAGACACTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
CDS-3UTR CCA 90 bp | TACAGGAGACGCCTGAGGACAGTGCTCCCGTTCCTTTCCTTCCACATGGTGCCTAGCTGGTCAGGTCAGTaGGAGCTGCTGGCCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: YRRRLRTVLPFLSFHMVPSWSGQ*ELLACW Trigger: CCAACAGGCCAGCAGCTCCCACTGACCTGACCAGCT...AGGCACCATGTGGAAGGAAAGGAACGGGAGCACTGTCCTCAGGCGTCTCCTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
CDS-3UTR CCA 90 bp | TGGGAACAAGGTGTGGTCCAGAGAAGTTCTACATGGGCCACTGGAGAGGGGACCCACCCAGCACCTTCATaGCTATCCCCAGCTTGCCAG | + |
Preference number: 4 (lower is better) Translates to: WEQGVVQRSSTWATGEGTHPAPS*LSPACQ Trigger: CTGGCAAGCTGGGGATAGCCATGAAGGTGCTGGGTG...GGTCCCCTCTCCAGTGGCCCATGTAGAACTTCTCTGGACCACACCTTGTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
CDS-3UTR CCA 90 bp | CATGAGACACGGCTGCTCACAGGTCCCTTTGAGTGGCTGTGGCAAGTACTCACCCACCCAGCACCTTCATaGCTATCCCCAGCTTGCCAG | + |
Preference number: 4 (lower is better) Translates to: HETRLLTGPFEWLWQVLTHPAPS*LSPACQ Trigger: CTGGCAAGCTGGGGATAGCCATGAAGGTGCTGGGTG...GGTGAGTACTTGCCACAGCCACTCAAAGGGACCTGTGAGCAGCCGTGTCTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
CDS-3UTR CCA 90 bp | GGGAACAGGTCCAGCCACATCCTGACCCTTGGGTCTCTGTGTTCTTGGGAGAAGCACCCAGCACCTTCATaGCTATCCCCAGCTTGCCAG | + |
Preference number: 4 (lower is better) Translates to: GNRSSHILTLGSLCSWEKHPAPS*LSPACQ Trigger: CTGGCAAGCTGGGGATAGCCATGAAGGTGCTGGGTG...CTTCTCCCAAGAACACAGAGACCCAAGGGTCAGGATGTGGCTGGACCTGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
CDS-3UTR GCA 90 bp | CCCAGGATGAAGATGATCCAGAAGAGGGCCACTCCACCCAGCACCTTCATGGCTCAGGTCAGTGGGAGCTaGTGGCCTGTTGGAACTGTA | + |
Preference number: 4 (lower is better) Translates to: PRMKMIQKRATPPSTFMAQVSGS*WPVGTV Trigger: TACAGTTCCAACAGGCCAGCAGCTCCCACTGACCTG...AGCCATGAAGGTGCTGGGTGGAGTGGCCCTCTTCTGGATCATCTTCATCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
CDS-3UTR CCA 90 bp | GATGTAACCCAGGATGAAGATGATCCAGAAGAGGGCCACTCCACCCAGCACCTTAGCTGGTCAGGTCAGTaGGAGCTGCTGGCCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: DVTQDEDDPEEGHSTQHLSWSGQ*ELLACW Trigger: CCAACAGGCCAGCAGCTCCCACTGACCTGACCAGCT...AAGGTGCTGGGTGGAGTGGCCCTCTTCTGGATCATCTTCATCCTGGGTTACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
CDS-3UTR CCA 90 bp | TCCTCACATGGTCCAGTAAGGAGGGAACAGGTCCAGCCACATCCTGACCCTTGGGGGCTTGAACAAAGCTaGTCAGGTCAGTGGGAGCTG | + |
Preference number: 4 (lower is better) Translates to: SSHGPVRREQVQPHPDPWGLEQS*SGQWEL Trigger: CAGCTCCCACTGACCTGACCAGCTTTGTTCAAGCCC...CCAAGGGTCAGGATGTGGCTGGACCTGTTCCCTCCTTACTGGACCATGTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
CDS-3UTR GCA 90 bp | TATGCCCTGGGGTCTGTATGGAGGAGTGTCTGCACAAATGGCCTGTGTACATGGTGGCTATCCCCAGCTTaGCAGAGCACAGCTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: YALGSVWRSVCTNGLCTWWLSPA*QSTASG Trigger: CCCAGAAGCTGTGCTCTGGCAAGCTGGGGATAGCCA...CCATGTACACAGGCCATTTGTGCAGACACTCCTCCATACAGACCCCAGGGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
CDS-3UTR GCA 90 bp | TGTATGGAGGAGTGTCTGCACAAATGGCCTGTGTACATGGGAGGGAATCCCCAGTGGCTATCCCCAGCTTaGCAGAGCACAGCTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: CMEECLHKWPVYMGGNPQWLSPA*QSTASG Trigger: CCCAGAAGCTGTGCTCTGGCAAGCTGGGGATAGCCA...CTGGGGATTCCCTCCCATGTACACAGGCCATTTGTGCAGACACTCCTCCATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
3UTR CAA 72 bp | TGGGTCTACCCTGTGTACTGGAGATGGGGAGCCATGTaGACAGTGCACACTGGCATCTTCATATGCCCTGGG | + |
Preference number: 4 (lower is better) Translates to: WVYPVYWRWGAM*TVHTGIFICPG Trigger: CCCAGGGCATATGAAGATGCCAGTGTGCACTGTCAACATGGCTCCCCATCTCCAGTACACAGGGTAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 72 bp | CACCCATGTCCCTGGCTCAGCCATGTCTGCCCTGTCTaGCTACACACCTGCTCCAAAGATGACCTCTTGACA | + |
Preference number: 4 (lower is better) Translates to: HPCPWLSHVCPV*LHTCSKDDLLT Trigger: TGTCAAGAGGTCATCTTTGGAGCAGGTGTGTAGCAAGACAGGGCAGACATGGCTGAGCCAGGGACATGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
CDS-3UTR GCA 90 bp | CGTGTAGTCCTTTGTAGTCAGACAGATGCTTCGTGGACTGTGCCTCACACATGGTGGCTATCCCCAGCTTaGCAGAGCACAGCTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: RVVLCSQTDASWTVPHTWWLSPA*QSTASG Trigger: CCCAGAAGCTGTGCTCTGGCAAGCTGGGGATAGCCA...CCATGTGTGAGGCACAGTCCACGAAGCATCTGTCTGACTACAAAGGACTACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 |
||
CDS-3UTR GCA 90 bp | GGAGTGGGGCAGCATTTATTTGCACTTGTGCACGTAGTAGCCAGTGATGTAACCCTATCTGCTCAAAGGTaGCGTGGGCACCTGGACGGG | + |
Preference number: 4 (lower is better) Translates to: GVGQHLFALVHVVASDVTLSAQR*RGHLDG Trigger: CCCGTCCAGGTGCCCACGGCACCTTTGAGCAGATAG...GGTTACATCACTGGCTACTACGTGCACAAGTGCAAATAAATGCTGCCCCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
CDS-3UTR CCA 90 bp | GTAGCCAGTGATGTAACCCAGGATGAAGATGATCCAGAAGAGGGCCACTCCACCGGGCTTGAACAAAGCTaGTCAGGTCAGTGGGAGCTG | + |
Preference number: 4 (lower is better) Translates to: VASDVTQDEDDPEEGHSTGLEQS*SGQWEL Trigger: CAGCTCCCACTGACCTGACCAGCTTTGTTCAAGCCC...GGTGGAGTGGCCCTCTTCTGGATCATCTTCATCCTGGGTTACATCACTGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
3UTR CAA 72 bp | CCTGTCTTGCTACACACCTGCTCCAAAGATGACCTCTaGACAAGAGCTCCACTAGGCCTTAGGGGGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: PVLLHTCSKDDL*TRAPLGLRGSF Trigger: GAAGGACCCCCTAAGGCCTAGTGGAGCTCTTGTCAAGAGGTCATCTTTGGAGCAGGTGTGTAGCAAGACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 72 bp | ACCAGACCCTCAGCCTTCCCCCTCGACACCTTCTCGTaGGTGACCTCTGACCTTAAAGGACCATTTCTACCT | + |
Preference number: 4 (lower is better) Translates to: TRPSAFPLDTFS*VTSDLKGPFLP Trigger: AGGTAGAAATGGTCCTTTAAGGTCAGAGGTCACCAACGAGAAGGTGTCGAGGGGGAAGGCTGAGGGTCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
3UTR CAA 72 bp | CTGTTCTCCATGAGACACGGCTGCTCACAGGTCCCTTaGAGTGGCTGTGGCAAGTACTCACCTACTAAGTGT | + |
Preference number: 4 (lower is better) Translates to: LFSMRHGCSQVP*SGCGKYSPTKC Trigger: ACACTTAGTAGGTGAGTACTTGCCACAGCCACTCAAAGGGACCTGTGAGCAGCCGTGTCTCATGGAGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143047.8 ENSMUST00000182151.8 ENSMUST00000182191.8 |
||
CDS-3UTR TCA 90 bp | AGGACCATTTCTACCTTCTGTAAAAGAACACCTGTTTGGGGTTGCGTGCGGCTTTGGACGGGCTGGGCTTaGACAAAGCTGGTCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: RTISTFCKRTPVWGCVRLWTGWA*TKLVRS Trigger: TGACCTGACCAGCTTTGTTCAAGCCCAGCCCGTCCA...AAGCCGCACGCAACCCCAAACAGGTGTTCTTTTACAGAAGGTAGAAATGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
CDS-3UTR TCA 90 bp | TTTGCACTTGTGCACGTAGTAGCCAGTGATGTAACCCAGGATGAAGATGATCCATGGACGGGCTGGGCTTaGACAAAGCTGGTCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: FALVHVVASDVTQDEDDPWTGWA*TKLVRS Trigger: TGACCTGACCAGCTTTGTTCAAGCCCAGCCCGTCCA...TGGATCATCTTCATCCTGGGTTACATCACTGGCTACTACGTGCACAAGTGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
CDS-3UTR CCA 90 bp | TTTGCACTTGTGCACGTAGTAGCCAGTGATGTAACCCAGGATGAAGATGATCCAGTCAGTGGGAGCTGCTaGCCTGTTGGAACTGTACCT | + |
Preference number: 4 (lower is better) Translates to: FALVHVVASDVTQDEDDPVSGSC*PVGTVP Trigger: AGGTACAGTTCCAACAGGCCAGCAGCTCCCACTGAC...TGGATCATCTTCATCCTGGGTTACATCACTGGCTACTACGTGCACAAGTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
3UTR CAA 72 bp | GAATCATGTGGCCTGTGGCCGTGCTGGAGAGTCAGGTaGAACGCAGGCATTCTATTGAACAGTATTTATTTT | + |
Preference number: 4 (lower is better) Translates to: ESCGLWPCWRVR*NAGILLNSIYF Trigger: AAAATAAATACTGTTCAATAGAATGCCTGCGTTCAACCTGACTCTCCAGCACGGCCACAGGCCACATGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
CDS-3UTR CAA 90 bp | CTGGCCTCCTTCCTTTGGCCACTGATAGCAGCAGCCCCTGTGCCTGCCACCCTCCTGGACGGGCTGGGCTaGAACAAAGCTGGTCAGGTC | + |
Preference number: 5 (lower is better) Translates to: LASFLWPLIAAAPVPATLLDGLG*NKAGQV Trigger: GACCTGACCAGCTTTGTTCAAGCCCAGCCCGTCCAG...GAGGGTGGCAGGCACAGGGGCTGCTGCTATCAGTGGCCAAAGGAAGGAGGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182191.8 |
||
CDS TCA 90 bp | CCCCAGCTTGCCAGAGCACAGCTTCTGGGAGATCCTCCTATAGCATaGGGCTTCTTCCGAGCTGGACATGGCGGTCATGCTGACTTCATC | + |
Preference number: 5 (lower is better) Translates to: PQLARAQLLGDPPIA*GFFRAGHGGHADFI Trigger: GATGAAGTCAGCATGACCGCCATGTCCAGCTCGGAAGAAGCCTCATGCTATAGGAGGATCTCCCAGAAGCTGTGCTCTGGCAAGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000130175.8 ENSMUST00000132541.8 ENSMUST00000143047.8 ENSMUST00000145527.8 ENSMUST00000146054.8 ENSMUST00000182151.8 |
||
CDS-3UTR CAA 90 bp | CTTGTGCACGTAGTAGCCAGTGATGTAACCCAGGATGAAGATGATCCAGAAGAGCTGGACGGGCTGGGCTaGAACAAAGCTGGTCAGGTC | + |
Preference number: 5 (lower is better) Translates to: LVHVVASDVTQDEDDPEELDGLG*NKAGQV Trigger: GACCTGACCAGCTTTGTTCAAGCCCAGCCCGTCCAG...CTCTTCTGGATCATCTTCATCCTGGGTTACATCACTGGCTACTACGTGCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146543.9 ENSMUST00000182191.8 |
||
CDS TCA 72 bp | ATGAGGCTTCTTCCGAGCTGGACATGGCGGTCATGCTaGCTTCATCCCGGCTGCTGCTGTCCCACCTGCTGT | + |
Preference number: 6 (lower is better) Translates to: MRLLPSWTWRSC*LHPGCCCPTCC Trigger: ACAGCAGGTGGGACAGCAGCAGCCGGGATGAAGTCAGCATGACCGCCATGTCCAGCTCGGAAGAAGCCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000125533.9 ENSMUST00000126119.8 ENSMUST00000130175.8 ENSMUST00000131325.3 ENSMUST00000132541.8 ENSMUST00000143047.8 ENSMUST00000145527.8 ENSMUST00000146054.8 ENSMUST00000146543.9 ENSMUST00000182151.8 ENSMUST00000182191.8 |