Pregenerated sensors for SMG9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002210Ensembl transcript IDs: ENSMUST00000002280.11, ENSMUST00000108434.2, ENSMUST00000123188.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTaGCAGGCCTCTGTCACTCTCCTCCCTTGCTGGAGGGTGGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: GLRHLTSLSGKPRSL*QASVTLLPCWRVAV Trigger: CACAGCCACCCTCCAGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR CCA 90 bp | GATCCCTCTGCCAGGCCTCTGTCACTCTCCTCCCTTGCTGGAGGGTaGCTGTGCCCTCACTGTCCACAGGACAGCCCACAGGACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: DPSARPLSLSSLAGG*LCPHCPQDSPQDRA Trigger: TGCCCTGTCCTGTGGGCTGTCCTGTGGACAGTGAGGGCACAGCCACCCTCCAGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR CCA 90 bp | TTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTaGCACATTGACTCCTCCTCCTGCTGCTGCTGGTCTCTATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: FPRKAWSQTQWGQAS*HIDSSSCCCWSLWR Trigger: TCTCCATAGAGACCAGCAGCAGCAGGAGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR GCA 90 bp | ACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTCCTGCTaGTGCTGGTCTCTATGGAGATTTGGGAAAGGCTGCTCATACCAG | + |
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Preference number: 1 (lower is better) Translates to: TQWGQASWHIDSSSC*CWSLWRFGKGCSYQ Trigger: CTGGTATGAGCAGCCTTTCCCAAATCTCCATAGAGACCAGCAGCAGCAGGAGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGACAGGGCAGTTCCCTaGATGCTGCTGCTCCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: AGLRHLTSLSGKPRSLCQDRAVP*MLLLPR Trigger: CCGAGGGAGCAGCAGCATGCAGGGAACTGCCCTGTC...CTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR-3UTR CCA 90 bp | CCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCTCCCTTGCTGGAGGGTaGCTGTGCCCTCACTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PVSHGRPGVRLSGVRLPGSLAGG*LCPHCP Trigger: TGGACAGTGAGGGCACAGCCACCCTCCAGCAAGGGA...GCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCCAGCCCCAACCCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGAGATTTGGGAAAGGCTaGTCATACCAGGCTCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: ALQPQPRFPRKAWSQTQWRFGKG*SYQARG Trigger: ACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCT...CCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGGGTTGGGGCTGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR-3UTR GCA 90 bp | TCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGTCCTCCTCCTGCTGCTaGTGGTCTCTATGGAGATTT | + |
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Preference number: 2 (lower is better) Translates to: SHGRPGVRLSGVRLPGTLSSSCC*WSLWRF Trigger: AAATCTCCATAGAGACCAGCAGCAGCAGGAGGAGGA...CAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGATCTCTTAGTCAAGCCACGATCCCTCTaGCAGGCCTCTGTCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: MEIWERLLIPGSGWDLLVKPRSL*QASVTL Trigger: GAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTT...GACTAAGAGATCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTTGCTGCTGGTCTCTATaGAGATTTGGGAAAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RPGVRLSGVRLPGTLTPPCCWSL*RFGKGC Trigger: GCAGCCTTTCCCAAATCTCCATAGAGACCAGCAGCA...AGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR-3UTR CAA 90 bp | GCTCTCCAGCCCCAACCCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGTGTCACTCTCCTCCCTaGCTGGAGGGTGGCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: ALQPQPRFPRKAWSQTQWCHSPP*LEGGCA Trigger: GGCACAGCCACCCTCCAGCAAGGGAGGAGAGTGACA...CCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGGGTTGGGGCTGGAGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR GCA 72 bp | CGATCCCTCTGCCAGGCCTCTGTCACTCTCCTCCCTTaGTGGAGGGTGGCTGTGCCCTCACTGTCCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: RSLCQASVTLLP*WRVAVPSLSTG Trigger: TCCTGTGGACAGTGAGGGCACAGCCACCCTCCAGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGATCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR GCA 72 bp | CACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTaGCAGGCCTCTGTCACTCTCCTCCCTTGCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: HLTSLSGKPRSL*QASVTLLPCWR Trigger: CCTCCAGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR CCA 72 bp | TCCCTCTGCCAGGCCTCTGTCACTCTCCTCCCTTGCTaGAGGGTGGCTGTGCCCTCACTGTCCACAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: SLCQASVTLLPC*RVAVPSLSTGQ Trigger: CTGTCCTGTGGACAGTGAGGGCACAGCCACCCTCCAGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR CCA 72 bp | CCCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTaGGGTCAGGCTTCCTGGCACATTGACTCCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: PRFPRKAWSQTQ*GQASWHIDSSS Trigger: GGAGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR GCA 72 bp | GGTCAGGCTTCCTGGCACATTGACTCCTCCTCCTGCTaGTGCTGGTCTCTATGGAGATTTGGGAAAGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GQASWHIDSSSC*CWSLWRFGKGC Trigger: GCAGCCTTTCCCAAATCTCCATAGAGACCAGCAGCAGCAGGAGGAGGAGTCAATGTGCCAGGAAGCCTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| 3UTR CCA 72 bp | GCTTCCTGGCACATTGACTCCTCCTCCTGCTGCTGCTaGTCTCTATGGAGATTTGGGAAAGGCTGCTCATAC | + |
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Preference number: 3 (lower is better) Translates to: ASWHIDSSSCCC*SLWRFGKGCSY Trigger: GTATGAGCAGCCTTTCCCAAATCTCCATAGAGACCAGCAGCAGCAGGAGGAGGAGTCAATGTGCCAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | TCTCCAGCCCCAACCCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGCAGTGGGGCCGGGGCTaGCGGTGCAGCTGGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SPAPTPFPTEGLESDSVGQWGRG*RCSWRC Trigger: ACAGCGCCAGCTGCACCGCCAGCCCCGGCCCCACTG...CCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGGGTTGGGGCTGGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CACAGGACAGCCCACAGGACAGGGCAGTTCCCTGCATGCTGCTGCTCCCTCGGCGGTCCAGAAAGGTTCTaGGGGCCACTGGAGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HRTAHRTGQFPACCCSLGGPERF*GPLEPG Trigger: GCCAGGCTCCAGTGGCCCCCAGAACCTTTCTGGACC...GCCGAGGGAGCAGCAGCATGCAGGGAACTGCCCTGTCCTGTGGGCTGTCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | CACAGGACAGCCCACAGGACAGGGCAGTTCCCTGCATGCTGCTGCTCCCTCGGCACCAGCTTGATGCTGTaGTTCATGCGCTCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HRTAHRTGQFPACCCSLGTSLML*FMRSGG Trigger: GCCCCCAGAGCGCATGAAGCACAGCATCAAGCTGGT...GCCGAGGGAGCAGCAGCATGCAGGGAACTGCCCTGTCCTGTGGGCTGTCCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | ACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTCCCACCACAGGGTCCATaGCAGTTGGGGCAGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TSLSGKPRSLCQASVTLLPPQGP*QLGQQC Trigger: GCACTGCTGCCCCAACTGCCATGGACCCTGTGGTGG...GAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGGCAGGAGCTTAGCCTaGCCCACCACAGGGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: LRHLTSLSGKPRSLCQASGRSLA*PTTGSM Trigger: CATGGACCCTGTGGTGGGCCAGGCTAAGCTCCTGCC...AGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | TGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTCCTGCGACTGGAAGCTGGGGTaGCCTCGGTACCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: WSQTQWGQASWHIDSSSCDWKLG*PRYPGR Trigger: CCTGCCTGGGTACCGAGGTCACCCCAGCTTCCAGTC...GCAGGAGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | CCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCGTACTCTGCCAGGGCTaGGGACTTCTTCACCCCATC | + |
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Preference number: 4 (lower is better) Translates to: PVSHGRPGVRLSGVRLPGVLCQG*GLLHPI Trigger: GATGGGGTGAAGAAGTCCTCAGCCCTGGCAGAGTAC...GCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | TCTCCAGCCCCAACCCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGGGGCAGCAGTGCCCATaGCCCGGTTTTGAATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPAPTPFPTEGLESDSVGGQQCP*PGFESG Trigger: ACCAGATTCAAAACCGGGGCATGGGCACTGCTGCCC...CCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGGGTTGGGGCTGGAGA 62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | TCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTCCCTTGCTGACTTGCCTGTCCCCTaGAGGCCTAAGACACCGACC | + |
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Preference number: 4 (lower is better) Translates to: SAGSHDPSARPLSLSSLADLPVP*RPKTPT Trigger: GGTCGGTGTCTTAGGCCTCCAGGGGACAGGCAAGTC...AGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCGGGGGACGGTGTGGATaGCTTCACCATCTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PVSHGRPGVRLSGVRLPGGGRCG*LHHLCC Trigger: ACAGCAGAGATGGTGAAGCCATCCACACCGTCCCCC...GCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGGCTGGGGGACGGTGTaGATGGCTTCACCATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LRHLTSLSGKPRSLCQASGWGTV*MASPSL Trigger: CAGAGATGGTGAAGCCATCCACACCGTCCCCCAGCC...AGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | ACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTCGAGCTGCTAGACTCGTaGCTGGGGGACGGTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: TSLSGKPRSLCQASVTLLELLDS*LGDGVD Trigger: ATCCACACCGTCCCCCAGCCACGAGTCTAGCAGCTC...GAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | TCTCCAGCCCCAACCCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGATCATCAGGTGCATCTaGCGTAGCTTCCGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: SPAPTPFPTEGLESDSVGIIRCI*RSFRGQ Trigger: CTGTCCCCGGAAGCTACGTCAGATGCACCTGATGAT...CCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGGGTTGGGGCTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | GGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCCAGCTTCACTGTCCATaGAGGGCACCAGGAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: GLRHLTSLSGKPRSLCQAQLHCP*RAPGTS Trigger: ACTTGTTCCTGGTGCCCTTCATGGACAGTGAAGCTG...GGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | CACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTAGTGAGGATCGTGTGTaGCAGCTGTGGCCGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HVSQREATIPLPGLCHSPSEDRV*QLWPSH Trigger: ATGGCTCGGCCACAGCTGTCACACACGATCCTCACT...AGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGGTACACAGGCTGTGTaGGTCTCTGCCCCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRHLTSLSGKPRSLCQASGTQAV*VSAPPS Trigger: AGAAGGAGGGGCAGAGACCCACACAGCCTGTGTACC...AGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | TCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGGTGCTTCATGCGCTCTaGGGGCAGGAGCTTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SHGRPGVRLSGVRLPGTLVLHAL*GQELSL Trigger: CAGGCTAAGCTCCTGCCCCCAGAGCGCATGAAGCAC...CAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | AGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTGGGAAAAGAGGGGGCTaGAGCCAGGTCCTGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: RPGVRLSGVRLPGTLTPPGKRGG*SQVLLE Trigger: CTCGAGCAGGACCTGGCTCCAGCCCCCTCTTTTCCC...AGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | ACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTCGCCATAGACATCACCTaGCTGCGGAGCTTGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TSLSGKPRSLCQASVTLLAIDIT*LRSLLT Trigger: GGTCAGCAAGCTCCGCAGCCAGGTGATGTCTATGGC...GAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | CCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCCCTCACGTGGCTTCATaGGCACAATGGGTTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PVSHGRPGVRLSGVRLPGPHVAS*AQWVSP Trigger: TGGAGAAACCCATTGTGCTCATGAAGCCACGTGAGG...GCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | CACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTGGTCGTCTACCAGCTTaGTGCTGTGCTTCATGCGCT | + |
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Preference number: 4 (lower is better) Translates to: HVSQREATIPLPGLCHSPGRLPA*CCASCA Trigger: AGCGCATGAAGCACAGCATCAAGCTGGTAGACGACC...AGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | GCTGGTCTCTATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGAGGCTGCGGAGCTTGCTaGCCAAGGACTGGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGLYGDLGKAAHTRLGVGGCGAC*PRTGSW Trigger: CCAGCTTCCAGTCCTTGGTCAGCAAGCTCCGCAGCC...TCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCATAGAGACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | CACAGGACAGCCCACAGGACAGGGCAGTTCCCTGCATGCTGCTGCTCCCTCGGCGAAGTCCTCCCTACGTaGCTTGTTCTGCAAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: HRTAHRTGQFPACCCSLGEVLPT*LVLQED Trigger: GTCTTCTTGCAGAACAAGGCACGTAGGGAGGACTTC...GCCGAGGGAGCAGCAGCATGCAGGGAACTGCCCTGTCCTGTGGGCTGTCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | CACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTTCACCCCATCCCAGATaGGGGCAGCGTAGTGGAACC | + |
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Preference number: 4 (lower is better) Translates to: HGRPGVRLSGVRLPGTLTSPHPR*GQRSGT Trigger: GGTTCCACTACGCTGCCCGCATCTGGGATGGGGTGA...AGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CACAGGACAGCCCACAGGACAGGGCAGTTCCCTGCATGCTGCTGCTCCCTCGGCTCTCTGGTCTTCCTCTaGAGTGTTTGCAGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HRTAHRTGQFPACCCSLGSLVFL*SVCRQQ Trigger: CTGCTGTCTGCAAACACTCCAGAGGAAGACCAGAGA...GCCGAGGGAGCAGCAGCATGCAGGGAACTGCCCTGTCCTGTGGGCTGTCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | TCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTCCCTTGCTGTGGTCCAAGATGGATaGGCTGAGGATGGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SAGSHDPSARPLSLSSLAVVQDG*AEDGLC Trigger: ACACAGCCCATCCTCAGCCCATCCATCTTGGACCAC...AGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCAAGGACTGGAAGCTaGGGTGACCTCGGTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: HGRPGVRLSGVRLPGTLTPRTGS*GDLGTQ Trigger: CTGGGTACCGAGGTCACCCCAGCTTCCAGTCCTTGG...AGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGATCTCTTAGTCAGGTGGCGGCTGCTTTaGCCGCTCAGCTGGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: MEIWERLLIPGSGWDLLVRWRLL*PLSWGL Trigger: AAGCCCCCAGCTGAGCGGTCAAAGCAGCCGCCACCT...GACTAAGAGATCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | TCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGGGTGGGAGTGTGCCATaGGCTGGTCAATCATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SHGRPGVRLSGVRLPGTLGGSVP*AGQSSG Trigger: ACCTGATGATTGACCAGCTCATGGCACACTCCCACC...CAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | GGCTGGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAATGATGGGGGTTTTCTaGATGACGTTAGTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GWPQTPHVSQREATIPLPMMGVF*MTLVLG Trigger: CCCCAGCACTAACGTCATGCAGAAAACCCCCATCAT...TGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | GGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCACACCAGTTCATCTaGTCGTCTACCAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLRHLTSLSGKPRSLCQASHQFI*SSTSLM Trigger: CATCAAGCTGGTAGACGACCAGATGAACTGGTGTGA...GGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGCCAGCAGGTACTCAATaGCACTGTCACACCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLRHLTSLSGKPRSLCQPAGTQ*HCHTSS Trigger: TGAACTGGTGTGACAGTGCCATTGAGTACCTGCTGG...CTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | AGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTCCCATGCCCCGGTTTTaGATCTGGTACACAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGVRLSGVRLPGTLTPPPMPRF*IWYTGC Trigger: ACAGCCTGTGTACCAGATTCAAAACCGGGGCATGGG...AGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | AGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTCAGACAGCAGTGACATaGCCATGGACTTGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPGVRLSGVRLPGTLTPPQTAVT*PWTCLS Trigger: GGACAGGCAAGTCCATGGTCATGTCACTGCTGTCTG...AGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | GCTGGTCTCTATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGACCACGTGGCACACGGTaGAGAGGAAGGCAGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLYGDLGKAAHTRLGVGPRGTR*RGRQLS Trigger: AGATAGCTGCCTTCCTCTTCACCGTGTGCCACGTGG...TCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCATAGAGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | TGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTCCTGCTGCCACTGGTCTGGTTaGCCCCTCGTTCCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WSQTQWGQASWHIDSSSCCHWSG*PLVPSS Trigger: AGATGAAGGAACGAGGGGGCAACCAGACCAGTGGCA...GCAGGAGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | AGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTGCGCAGGTGGGAGTGTaGCATGAGCTGGTCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPGVRLSGVRLPGTLTPPAQVGV*HELVNH Trigger: ATGATTGACCAGCTCATGGCACACTCCCACCTGCGC...AGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCTTCCCCTCCTCACGTaGCTTCATGAGCACAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: HGRPGVRLSGVRLPGTLTLPLLT*LHEHNG Trigger: CCCATTGTGCTCATGAAGCCACGTGAGGAGGGGAAG...AGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | GCTGGTCTCTATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGACAGTACCTTCAGGGGTaGAAGCCCCTGTTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLYGDLGKAAHTRLGVGQYLQG*KPLFQP Trigger: TGGCTGGAACAGGGGCTTCCACCCCTGAAGGTACTG...TCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCATAGAGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | AGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTTCAATGCCACTGGTCTaGTTGCCCCCTCGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPGVRLSGVRLPGTLTPPSMPLV*LPPRSF Trigger: GAAGGAACGAGGGGGCAACCAGACCAGTGGCATTGA...AGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTAGGGAGGTTATACTCTaGAGGCAGTTTGCGGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRHLTSLSGKPRSLCQASREVIL*RQFAVV Trigger: AACGACCGCAAACTGCCTCCAGAGTATAACCTCCCT...AGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | CACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTGCACCAGGAACAAGTTaGCCTCAGCATCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HGRPGVRLSGVRLPGTLTAPGTS*PQHPGS Trigger: ACTTCCTGGATGCTGAGGTCAACTTGTTCCTGGTGC...AGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR GCA 90 bp | GTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACAACCATCTCTGCTGTCTaGAGGAACCTGTACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSHGRPGVRLSGVRLPGTTISAV*RNLYRL Trigger: CAGTCTGTACAGGTTCCTGCAGACAGCAGAGATGGT...TGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | GTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACAGAGTGTGCCATGAGCTaGTCAATCATCAGGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSHGRPGVRLSGVRLPGTECAMS*SIIRCI Trigger: GATGCACCTGATGATTGACCAGCTCATGGCACACTC...TGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | TCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACCAATTCTTCTCAGTaGGGATCGTGTGTGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHGRPGVRLSGVRLPGTLTNSSQ*GSCVTA Trigger: AGCTGTCACACACGATCCTCACTGAGAAGAATTGGT...CAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | CACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTAAGACATACGCTCTCTaGTCTTCCTCTGGAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVSQREATIPLPGLCHSPKTYAL*SSSGVF Trigger: AAACACTCCAGAGGAAGACCAGAGAGCGTATGTCTT...AGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGATCTCTTAGTCCTCAGCTGGGGGCTTTaGGAGGATGATGGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MEIWERLLIPGSGWDLLVLSWGL*EDDGGF Trigger: AAAACCCCCATCATCCTCTCAAAGCCCCCAGCTGAG...GACTAAGAGATCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CCA 90 bp | ATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGATCTCTTAGTCAGAAGTCAATGCCACTaGTCTGGTTGCCCCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: MEIWERLLIPGSGWDLLVRSQCH*SGCPLV Trigger: AACGAGGGGGCAACCAGACCAGTGGCATTGACTTCT...GACTAAGAGATCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS GCA 90 bp | CCTGGCCCACCACAGGGTCCATGGCAGTTGGGGCAGCAGTGCCCATaGCCCGGTTTTGAATCTGGTACACAGGCTGTGTGGGTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGPPQGPWQLGQQCP*PGFESGTQAVWVSA Trigger: GGCAGAGACCCACACAGCCTGTGTACCAGATTCAAAACCGGGGCATGGGCACTGCTGCCCCAACTGCCATGGACCCTGTGGTGGGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS-3UTR CAA 90 bp | GGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCATGCCACTGGTCTGGTaGCCCCCTCGTTCCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLRHLTSLSGKPRSLCQAMPLVW*PPRSFI Trigger: GATGAAGGAACGAGGGGGCAACCAGACCAGTGGCAT...GGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CAA 90 bp | GCTCTCCAGCCCCAACCCCGTTTCCCACGGAAGGCCTGGAGTCAGACTCAGTGGGCCCATGCCCCGGTTTaGAATCTGGTACACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALQPQPRFPRKAWSQTQWAHAPV*NLVHRL Trigger: CAGCCTGTGTACCAGATTCAAAACCGGGGCATGGGC...CCACTGAGTCTGACTCCAGGCCTTCCGTGGGAAACGGGGTTGGGGCTGGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS TCA 90 bp | GTTCTGCAAGAAGACCAGGTGGGGGTAGTACTCGGTACCCTCGTCTaGGCCTGCAGAGCTGCTAGACTCGTGGCTGGGGGACGGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLQEDQVGVVLGTLV*ACRAARLVAGGRCG Trigger: TCCACACCGTCCCCCAGCCACGAGTCTAGCAGCTCTGCAGGCTCAGACGAGGGTACCGAGTACTACCCCCACCTGGTCTTCTTGCAGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CCA 90 bp | GTTCATCTGGTCGTCTACCAGCTTGATGCTGTGCTTCATGCGCTCTaGGGGCAGGAGCTTAGCCTGGCCCACCACAGGGTCCATGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VHLVVYQLDAVLHAL*GQELSLAHHRVHGS Trigger: ACTGCCATGGACCCTGTGGTGGGCCAGGCTAAGCTCCTGCCCCCAGAGCGCATGAAGCACAGCATCAAGCTGGTAGACGACCAGATGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS-3UTR CAA 90 bp | TCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGTCACTCTCCTCCCTTGCTTGGTCGTCTACCAGCTaGATGCTGTGCTTCATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAGSHDPSARPLSLSSLAWSSTS*MLCFMR Trigger: GCGCATGAAGCACAGCATCAAGCTGGTAGACGACCA...AGCAAGGGAGGAGAGTGACAGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CAA 90 bp | AGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTACCTGGCTGCGGAGCTaGCTGACCAAGGACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPGVRLSGVRLPGTLTPPTWLRS*LTKDWK Trigger: CTTCCAGTCCTTGGTCAGCAAGCTCCGCAGCCAGGT...AGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS TCA 90 bp | GTAGCATGGACAGCGTCCCCTTGTAGCGCAGGTGGGAGTGTGCCATaGGCTGGTCAATCATCAGGTGCATCTGACGTAGCTTCCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VAWTASPCSAGGSVP*AGQSSGASDVASGD Trigger: GTCCCCGGAAGCTACGTCAGATGCACCTGATGATTGACCAGCTCATGGCACACTCCCACCTGCGCTACAAGGGGACGCTGTCCATGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS GCA 90 bp | GCACTGTCACACCAGTTCATCTGGTCGTCTACCAGCTTGATGCTGTaGTTCATGCGCTCTGGGGGCAGGAGCTTAGCCTGGCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALSHQFIWSSTSLML*FMRSGGRSLAWPTT Trigger: TGTGGTGGGCCAGGCTAAGCTCCTGCCCCCAGAGCGCATGAAGCACAGCATCAAGCTGGTAGACGACCAGATGAACTGGTGTGACAGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS TCA 90 bp | CGCAGGTGGGAGTGTGCCATGAGCTGGTCAATCATCAGGTGCATCTaGCGTAGCTTCCGGGGACAGAAGTCCTCCCTACGTGCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRWECAMSWSIIRCI*RSFRGQKSSLRALF Trigger: GAACAAGGCACGTAGGGAGGACTTCTGTCCCCGGAAGCTACGTCAGATGCACCTGATGATTGACCAGCTCATGGCACACTCCCACCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS TCA 90 bp | GCGGGCAGCGTAGTGGAACCAATTCTTCTCAGTGAGGATCGTGTGTaGCAGCTGTGGCCGAGCCATAGACATCACCTGGCTGCGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGSVVEPILLSEDRV*QLWPSHRHHLAAEL Trigger: AAGCTCCGCAGCCAGGTGATGTCTATGGCTCGGCCACAGCTGTCACACACGATCCTCACTGAGAAGAATTGGTTCCACTACGCTGCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS GCA 90 bp | GCTGTCTGCAGGAACCTGTACAGACTGAGGTCCGTGAACCAATCCTaGACGACGATCACCACGTGGCACACGGTGAAGAGGAAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVCRNLYRLRSVNQS*TTITTWHTVKRKAA Trigger: AGCTGCCTTCCTCTTCACCGTGTGCCACGTGGTGATCGTCGTGCAGGATTGGTTCACGGACCTCAGTCTGTACAGGTTCCTGCAGACAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CAA 90 bp | GCTGGCCTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGAGTTTGCGGTCGTTATaGATGAGGTGGTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AGLRHLTSLSGKPRSLCQSLRSL*MRWSKM Trigger: CATCTTGGACCACCTCATCAATAACGACCGCAAACT...CTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAGGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CAA 90 bp | CACGGAAGGCCTGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTGGCACCAGGAACAAGTaGACCTCAGCATCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HGRPGVRLSGVRLPGTLTGTRNK*TSASRK Trigger: CTTCCTGGATGCTGAGGTCAACTTGTTCCTGGTGCC...AGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCAGGCCTTCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS GCA 90 bp | GAAGTCAATGCCACTGGTCTGGTTGCCCCCTCGTTCCTTCATCTCTaGACTCTGAGCCCGGAAGACATACGCTCTCTGGTCTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVNATGLVAPSFLHL*TLSPEDIRSLVFLW Trigger: CCAGAGGAAGACCAGAGAGCGTATGTCTTCCGGGCTCAGAGTGCAGAGATGAAGGAACGAGGGGGCAACCAGACCAGTGGCATTGACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS TCA 90 bp | ATGCCACTGGTCTGGTTGCCCCCTCGTTCCTTCATCTCTGCACTCTaGGCCCGGAAGACATACGCTCTCTGGTCTTCCTCTGGAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MPLVWLPPRSFISAL*ARKTYALWSSSGVF Trigger: AAACACTCCAGAGGAAGACCAGAGAGCGTATGTCTTCCGGGCTCAGAGTGCAGAGATGAAGGAACGAGGGGGCAACCAGACCAGTGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CCA 90 bp | TACAGACTGAGGTCCGTGAACCAATCCTGCACGACGATCACCACGTaGCACACGGTGAAGAGGAAGGCAGCTATCTGCAGGGACTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: YRLRSVNQSCTTITT*HTVKRKAAICRDCI Trigger: AATGCAGTCCCTGCAGATAGCTGCCTTCCTCTTCACCGTGTGCCACGTGGTGATCGTCGTGCAGGATTGGTTCACGGACCTCAGTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CAA 90 bp | TGGAGTCAGACTCAGTGGGGTCAGGCTTCCTGGCACATTGACTCCTCCTCCTGCTACTCTGGAGGCAGTTaGCGGTCGTTATTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSQTQWGQASWHIDSSSCYSGGS*RSLLMR Trigger: CCTCATCAATAACGACCGCAAACTGCCTCCAGAGTA...GCAGGAGGAGGAGTCAATGTGCCAGGAAGCCTGACCCCACTGAGTCTGACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CAA 90 bp | ATGGAGATTTGGGAAAGGCTGCTCATACCAGGCTCGGGGTGGGATCTCTTAGTCAGCCCTGGGAAGACGTaGCACTGTAGCATGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: MEIWERLLIPGSGWDLLVSPGKT*HCSMDS Trigger: GCTGTCCATGCTACAGTGCAACGTCTTCCCAGGGCT...GACTAAGAGATCCCACCCCGAGCCTGGTATGAGCAGCCTTTCCCAAATCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS-3UTR CAA 90 bp | CTCAGACACCTCACGTCTCTCAGCGGGAAGCCACGATCCCTCTGCCAGGCCTCTGAAGACAATCCGCTCTaGGGTAATGAAGAAGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRHLTSLSGKPRSLCQASEDNPL*GNEEVN Trigger: ATTGACTTCTTCATTACCCAAGAGCGGATTGTCTTC...AGAGGCCTGGCAGAGGGATCGTGGCTTCCCGCTGAGAGACGTGAGGTGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CCA 90 bp | CCTGCAGAGCTGCTAGACTGTGTGTCTAGGAAGACAATCCGCTCTTaGGTAATGAAGAAGTCAATGCCACTGGTCTGGTTGCCCCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PAELLDCVSRKTIRS*VMKKSMPLVWLPPR Trigger: ACGAGGGGGCAACCAGACCAGTGGCATTGACTTCTTCATTACCCAAGAGCGGATTGTCTTCCTAGACACACAGTCTAGCAGCTCTGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123188.2 |
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| CDS CCA 90 bp | CTGCAGGGACTGCATTTCCACATAGGTGTGAGGGAGGTTATACTCTaGAGGCAGTTTGCGGTCGTTATTGATGAGGTGGTCCAAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQGLHFHIGVREVIL*RQFAVVIDEVVQDG Trigger: TCCATCTTGGACCACCTCATCAATAACGACCGCAAACTGCCTCCAGAGTATAACCTCCCTCACACCTATGTGGAAATGCAGTCCCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CCA 72 bp | CATGAGCACAATGGGTTTCTCCAGTGGGGCCGGGGCTaGCGGTGCAGCTGGCGCTGTACTAGGTGGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HEHNGFLQWGRG*RCSWRCTRWRL Trigger: CAGCCGCCACCTAGTACAGCGCCAGCTGCACCGCCAGCCCCGGCCCCACTGGAGAAACCCATTGTGCTCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS GCA 72 bp | GCTGGCGGTGCAGCTGGCGCTGTACTAGGTGGCGGCTaGTTTGACCGCTCAGCTGGGGGCTTTGAGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AGGAAGAVLGGG*FDRSAGGFERM Trigger: CATCCTCTCAAAGCCCCCAGCTGAGCGGTCAAAGCAGCCGCCACCTAGTACAGCGCCAGCTGCACCGCCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS CCA 72 bp | CTGTGCTTCATGCGCTCTGGGGGCAGGAGCTTAGCCTaGCCCACCACAGGGTCCATGGCAGTTGGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LCFMRSGGRSLA*PTTGSMAVGAA Trigger: TGCTGCCCCAACTGCCATGGACCCTGTGGTGGGCCAGGCTAAGCTCCTGCCCCCAGAGCGCATGAAGCACAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS CCA 72 bp | CGGGCGGCAGCCCTGGGAAGACGTTGCACTGTAGCATaGACAGCGTCCCCTTGTAGCGCAGGTGGGAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RAAALGRRCTVA*TASPCSAGGSV Trigger: CACACTCCCACCTGCGCTACAAGGGGACGCTGTCCATGCTACAGTGCAACGTCTTCCCAGGGCTGCCGCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS TCA 72 bp | GAAGACCAGGTGGGGGTAGTACTCGGTACCCTCGTCTaGGCCTGCAGAGCTGCTAGACTCGTGGCTGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: EDQVGVVLGTLV*ACRAARLVAGG Trigger: TCCCCCAGCCACGAGTCTAGCAGCTCTGCAGGCTCAGACGAGGGTACCGAGTACTACCCCCACCTGGTCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS GCA 72 bp | CATCCAGGAAGTCGGGCGGCAGCCCTGGGAAGACGTTaGACTGTAGCATGGACAGCGTCCCCTTGTAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: HPGSRAAALGRR*TVAWTASPCSA Trigger: TGCGCTACAAGGGGACGCTGTCCATGCTACAGTGCAACGTCTTCCCAGGGCTGCCGCCCGACTTCCTGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS CCA 72 bp | GTACCCTCGTCTGAGCCTGCAGAGCTGCTAGACTCGTaGCTGGGGGACGGTGTGGATGGCTTCACCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: VPSSEPAELLDS*LGDGVDGFTIS Trigger: AGAGATGGTGAAGCCATCCACACCGTCCCCCAGCCACGAGTCTAGCAGCTCTGCAGGCTCAGACGAGGGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS GCA 72 bp | GCCACTGGTCTGGTTGCCCCCTCGTTCCTTCATCTCTaGACTCTGAGCCCGGAAGACATACGCTCTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: ATGLVAPSFLHL*TLSPEDIRSLV Trigger: GACCAGAGAGCGTATGTCTTCCGGGCTCAGAGTGCAGAGATGAAGGAACGAGGGGGCAACCAGACCAGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS GCA 72 bp | GTGGCTGGGGGACGGTGTGGATGGCTTCACCATCTCTaGTGTCTGCAGGAACCTGTACAGACTGAGGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: VAGGRCGWLHHL*CLQEPVQTEVR Trigger: ACGGACCTCAGTCTGTACAGGTTCCTGCAGACAGCAGAGATGGTGAAGCCATCCACACCGTCCCCCAGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CCA 72 bp | GTGTGTGACAGCTGTGGCCGAGCCATAGACATCACCTaGCTGCGGAGCTTGCTGACCAAGGACTGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VCDSCGRAIDIT*LRSLLTKDWKL Trigger: CAGCTTCCAGTCCTTGGTCAGCAAGCTCCGCAGCCAGGTGATGTCTATGGCTCGGCCACAGCTGTCACACAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CAA 90 bp | TTCTCGTTCTCAGCTTCACTGTCCATGAAGGGCACCAGGAACAAGTaGACCTCAGCATCCAGGAAGTCGGGCGGCAGCCCTGGGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: FSFSASLSMKGTRNK*TSASRKSGGSPGKT Trigger: CGTCTTCCCAGGGCTGCCGCCCGACTTCCTGGATGCTGAGGTCAACTTGTTCCTGGTGCCCTTCATGGACAGTGAAGCTGAGAACGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS GCA 72 bp | CACCAGTTCATCTGGTCGTCTACCAGCTTGATGCTGTaGTTCATGCGCTCTGGGGGCAGGAGCTTAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HQFIWSSTSLML*FMRSGGRSLAW Trigger: CCAGGCTAAGCTCCTGCCCCCAGAGCGCATGAAGCACAGCATCAAGCTGGTAGACGACCAGATGAACTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS GCA 72 bp | CATGGACAGCGTCCCCTTGTAGCGCAGGTGGGAGTGTaGCATGAGCTGGTCAATCATCAGGTGCATCTGACG | + |
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Preference number: 6 (lower is better) Translates to: HGQRPLVAQVGV*HELVNHQVHLT Trigger: CGTCAGATGCACCTGATGATTGACCAGCTCATGGCACACTCCCACCTGCGCTACAAGGGGACGCTGTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS CCA 72 bp | GACAGCAGTGACATGACCATGGACTTGCCTGTCCCCTaGAGGCCTAAGACACCGACCACTAACACGTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: DSSDMTMDLPVP*RPKTPTTNTSV Trigger: GACGGACGTGTTAGTGGTCGGTGTCTTAGGCCTCCAGGGGACAGGCAAGTCCATGGTCATGTCACTGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CCA 72 bp | AGGTCCGTGAACCAATCCTGCACGACGATCACCACGTaGCACACGGTGAAGAGGAAGGCAGCTATCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSVNQSCTTITT*HTVKRKAAICR Trigger: CCTGCAGATAGCTGCCTTCCTCTTCACCGTGTGCCACGTGGTGATCGTCGTGCAGGATTGGTTCACGGACCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CCA 72 bp | AGAGCTGCTAGACTCGTGGCTGGGGGACGGTGTGGATaGCTTCACCATCTCTGCTGTCTGCAGGAACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RAARLVAGGRCG*LHHLCCLQEPV Trigger: TACAGGTTCCTGCAGACAGCAGAGATGGTGAAGCCATCCACACCGTCCCCCAGCCACGAGTCTAGCAGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CAA 72 bp | GCACTGTCACACCAGTTCATCTGGTCGTCTACCAGCTaGATGCTGTGCTTCATGCGCTCTGGGGGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ALSHQFIWSSTS*MLCFMRSGGRS Trigger: GCTCCTGCCCCCAGAGCGCATGAAGCACAGCATCAAGCTGGTAGACGACCAGATGAACTGGTGTGACAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS CAA 72 bp | TCAGCTTCACTGTCCATGAAGGGCACCAGGAACAAGTaGACCTCAGCATCCAGGAAGTCGGGCGGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SASLSMKGTRNK*TSASRKSGGSP Trigger: AGGGCTGCCGCCCGACTTCCTGGATGCTGAGGTCAACTTGTTCCTGGTGCCCTTCATGGACAGTGAAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS TCA 72 bp | CACTGTCACACCAGTTCATCTGGTCGTCTACCAGCTTaGTGCTGTGCTTCATGCGCTCTGGGGGCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: HCHTSSSGRLPA*CCASCALGAGA Trigger: AGCTCCTGCCCCCAGAGCGCATGAAGCACAGCATCAAGCTGGTAGACGACCAGATGAACTGGTGTGACAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS TCA 72 bp | GTCTGGTTGCCCCCTCGTTCCTTCATCTCTGCACTCTaGGCCCGGAAGACATACGCTCTCTGGTCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VWLPPRSFISAL*ARKTYALWSSS Trigger: AGAGGAAGACCAGAGAGCGTATGTCTTCCGGGCTCAGAGTGCAGAGATGAAGGAACGAGGGGGCAACCAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS TCA 72 bp | ACAGCGTCCCCTTGTAGCGCAGGTGGGAGTGTGCCATaGGCTGGTCAATCATCAGGTGCATCTGACGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: TASPCSAGGSVP*AGQSSGASDVA Trigger: AGCTACGTCAGATGCACCTGATGATTGACCAGCTCATGGCACACTCCCACCTGCGCTACAAGGGGACGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS GCA 72 bp | AGGAACCTGTACAGACTGAGGTCCGTGAACCAATCCTaGACGACGATCACCACGTGGCACACGGTGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RNLYRLRSVNQS*TTITTWHTVKR Trigger: CCTCTTCACCGTGTGCCACGTGGTGATCGTCGTGCAGGATTGGTTCACGGACCTCAGTCTGTACAGGTTCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS CAA 90 bp | TACTCAATGGCACTGTCACACCAGTTCATCTGGTCGTCTACCAGCTaGATGCTGTGCTTCATGCGCTCTGGGGGCAGGAGCTTAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: YSMALSHQFIWSSTS*MLCFMRSGGRSLAW Trigger: CCAGGCTAAGCTCCTGCCCCCAGAGCGCATGAAGCACAGCATCAAGCTGGTAGACGACCAGATGAACTGGTGTGACAGTGCCATTGAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS CAA 90 bp | TCTTCCTCTGGAGTGTTTGCAGACAGCAGTGACATGACCATGGACTaGCCTGTCCCCTGGAGGCCTAAGACACCGACCACTAACACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSGVFADSSDMTMD*PVPWRPKTPTTNTS Trigger: GGACGTGTTAGTGGTCGGTGTCTTAGGCCTCCAGGGGACAGGCAAGTCCATGGTCATGTCACTGCTGTCTGCAAACACTCCAGAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS TCA 72 bp | TGGAGGCCTAAGACACCGACCACTAACACGTCCGTCTaGTCCAGCAGGTACTCAATGGCACTGTCACACCAG | + |
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Preference number: 6 (lower is better) Translates to: WRPKTPTTNTSV*SSRYSMALSHQ Trigger: CTGGTGTGACAGTGCCATTGAGTACCTGCTGGATCAGACGGACGTGTTAGTGGTCGGTGTCTTAGGCCTCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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| CDS TCA 72 bp | GAGTGTGCCATGAGCTGGTCAATCATCAGGTGCATCTaGCGTAGCTTCCGGGGACAGAAGTCCTCCCTACGT | + |
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Preference number: 6 (lower is better) Translates to: ECAMSWSIIRCI*RSFRGQKSSLR Trigger: ACGTAGGGAGGACTTCTGTCCCCGGAAGCTACGTCAGATGCACCTGATGATTGACCAGCTCATGGCACACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000123188.2 |
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| CDS CCA 72 bp | AGCAGGTACTCAATGGCACTGTCACACCAGTTCATCTaGTCGTCTACCAGCTTGATGCTGTGCTTCATGCGC | + |
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Preference number: 6 (lower is better) Translates to: SRYSMALSHQFI*SSTSLMLCFMR Trigger: GCGCATGAAGCACAGCATCAAGCTGGTAGACGACCAGATGAACTGGTGTGACAGTGCCATTGAGTACCTGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS CCA 72 bp | CCACTAACACGTCCGTCTGATCCAGCAGGTACTCAATaGCACTGTCACACCAGTTCATCTGGTCGTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: PLTRPSDPAGTQ*HCHTSSSGRLP Trigger: TGGTAGACGACCAGATGAACTGGTGTGACAGTGCCATTGAGTACCTGCTGGATCAGACGGACGTGTTAGTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002280.11 ENSMUST00000108434.2 |
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| CDS CCA 72 bp | CTGCATTTCCACATAGGTGTGAGGGAGGTTATACTCTaGAGGCAGTTTGCGGTCGTTATTGATGAGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LHFHIGVREVIL*RQFAVVIDEVV Trigger: GACCACCTCATCAATAACGACCGCAAACTGCCTCCAGAGTATAACCTCCCTCACACCTATGTGGAAATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002280.11 |
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