Pregenerated sensors for SMG8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020495Ensembl transcript IDs: ENSMUST00000020801.14, ENSMUST00000143280.2
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAACTaGTTTGAGGACTCCTCGGAGCACCTTGTAGCTCATGAGCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: QLQSAAEWLEDSLCN*FEDSSEHLVAHELH Trigger: GTGCAGCTCATGAGCTACAAGGTGCTCCGAGGAGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| 3UTR CAA 90 bp | GACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATaGTGTAACTGCTTTGAGGACTCCTCGGAGCACCTTGTAGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: DKQQLQSAAEWLEDS*CNCFEDSSEHLVAH Trigger: ATGAGCTACAAGGTGCTCCGAGGAGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAGCTGCACATTCTCCTTaGGAGGGAAACAAGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: IVQILNTCNQNTLGFGKTAAHSP*EGNKVL Trigger: GAGGACCTTGTTTCCCTCCCAAGGAGAATGTGCAGC...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| 3UTR-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACTGCGGCAGAGTGGCTaGAAGACTCATTGTGTAACT | + |
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Preference number: 2 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTLRQSG*KTHCVT Trigger: AGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAG...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| 3UTR GCA 72 bp | TCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAACTaGTTTGAGGACTCCTCGGAGCACCTTGTAGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SAAEWLEDSLCN*FEDSSEHLVAH Trigger: ATGAGCTACAAGGTGCTCCGAGGAGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| 3UTR CCA 72 bp | AAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTaGAAGACTCATTGTGTAACTGCTTTGAGGACTCCT | + |
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Preference number: 3 (lower is better) Translates to: KTNSSFSLRQSG*KTHCVTALRTP Trigger: AGGAGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| 3UTR CCA 72 bp | AAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTaGCTGGAAGACTCATTGTGTAACTGCTTTGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: KQDKQQLQSAAE*LEDSLCNCFED Trigger: GTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| 3UTR-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTGTAACCAAAACACATaGGGTTTTGGGAAGACACAG | + |
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Preference number: 3 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDCNQNT*GFGKTQ Trigger: CTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACA...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| 3UTR-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAAGCTGCACATTCTCCTaGGGAGGGAAACAAGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTSCTFS*GGKQGP Trigger: AGGACCTTGTTTCCCTCCCAAGGAGAATGTGCAGCT...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACCCGGCTTCACCGCTCTaGAGGGCCCGACAAGCACGC | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDPASPL*RARQAR Trigger: GCGTGCTTGTCGGGCCCTCCAGAGCGGTGAAGCCGG...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACCTCGGCGTCCGAGTCTaGCGGGGCAGGAGAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDLGVRV*RGRRGF Trigger: GAACCCTCTCCTGCCCCGCCAGACTCGGACGCCGAG...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CTTGGGAGGGAAACAAGGTCCTCTCTCAGTCACATAGGCATAAGGAAATCTCAACTCGGCGTCCGAGTCTaGCGGGGCAGGAGAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGRETRSSLSHIGIRKSQLGVRV*RGRRGF Trigger: GAACCCTCTCCTGCCCCGCCAGACTCGGACGCCGAG...TTGAGATTTCCTTATGCCTATGTGACTGAGAGAGGACCTTGTTTCCCTCCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAACTGCTTTGAGGACTCCTAGTTGCAGGCTCCGGTaGATCGGGCTCGGCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: SLRQSGWKTHCVTALRTPSCRLR*IGLGYC Trigger: ACAATAGCCGAGCCCGATCCACCGGAGCCTGCAACT...AGGAGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGTCTCCTCCTGCCTGTaGATCAGCGGGGTAGGTACC | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDVSSCL*ISGVGT Trigger: GGTACCTACCCCGCTGATCCACAGGCAGGAGGAGAC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| 3UTR CAA 72 bp | CAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATaGTGTAACTGCTTTGAGGACTCCTCGGAGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: QLQSAAEWLEDS*CNCFEDSSEHL Trigger: AAGGTGCTCCGAGGAGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR TCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACAGGCCCTGAGCACATaGACCTCCGACCTCGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRQALST*TSDLES Trigger: ACTCTCGAGGTCGGAGGTTCATGTGCTCAGGGCCTG...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | TGCTTTGAGGACTCCTCGGAGCACCTTGTAGCTCATGAGCTGCACATTCTCCTTTACTGGACATGGTGGTaGGCCTGGTTGAACCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: CFEDSSEHLVAHELHILLYWTWW*AWLNLG Trigger: GCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTA...AAGGAGAATGTGCAGCTCATGAGCTACAAGGTGCTCCGAGGAGTCCTCAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR TCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAAGAACTTCTCGGAGTTaGGGCGCAGAGCCGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRRTSRS*GAEPSC Trigger: GCAAGACGGCTCTGCGCCTCAACTCCGAGAAGTTCT...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR GCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGCTGGTCCAGCAACATaGCAATTGGGTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDAGPAT*QLGPPP Trigger: AGGAGGAGGACCCAATTGGCATGTTGCTGGACCAGC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR GCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACAGGTCCAGAAAGGGGTaGGGGCACCAACAACGATTC | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDRSRKG*GHQQRF Trigger: GAATCGTTGTTGGTGCCCGCACCCCTTTCTGGACCT...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR GCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGATCGTCTCGAGGTGCCTaGTTCCTTCCGCAGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRSSRGA*FLPQLQ Trigger: CTGCAACTGCGGAAGGAAGCAGGCACCTCGAGACGA...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACATGTTAGCTCCCCAGTaGGGGAGCCCAAGTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDMLAPQ*GSPSPL Trigger: AAGAGGACTTGGGCTCCCCCACTGGGGAGCTAACAT...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAAGTTGCAGGCTCCGGTaGATCGGGCTCGGCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRSCRLR*IGLGYC Trigger: ACAATAGCCGAGCCCGATCCACCGGAGCCTGCAACT...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTACTGGACATGGTGGTaGGCCTGGTTGAACCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDYWTWW*AWLNLR Trigger: CCTCAGGTTCAACCAGGCCCACCACCATGTCCAGTA...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | TCCTCGGAGCACCTTGTAGCTCATGAGCTGCACATTCTCCTTGGGAGGGAAACATTCTGGGTAAAATACTaGACATGGTGGTGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSEHLVAHELHILLGRETFWVKY*TWWWAW Trigger: CCAGGCCCACCACCATGTCCAGTATTTTACCCAGAA...TGTTTCCCTCCCAAGGAGAATGTGCAGCTCATGAGCTACAAGGTGCTCCGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR TCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGCACCTTGTAGCTCATaGGCTGCACATTCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDAPCSS*AAHSPW Trigger: CCAAGGAGAATGTGCAGCTCATGAGCTACAAGGTGC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACAGCAACATGCCAATTaGGTCCTCCTCCTGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRQQHAN*VLLLAS Trigger: GGAAGCCAGGAGGAGGACCCAATTGGCATGTTGCTG...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | GAGGGAAACAAGGTCCTCTCTCAGTCACATAGGCATAAGGAAATCTCAAGACCCATGTTAGCTCCCCAGTaGGGGAGCCCAAGTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: EGNKVLSQSHRHKEISRPMLAPQ*GSPSPL Trigger: AAGAGGACTTGGGCTCCCCCACTGGGGAGCTAACAT...GGGTCTTGAGATTTCCTTATGCCTATGTGACTGAGAGAGGACCTTGTTTCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | TCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCACATGGTGGTGGGCCTaGTTGAACCTAGGCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: SKTRQTAASVCGRVAGRLTWWWA*LNLGYL Trigger: CAGATAGCCTAGGTTCAACCAGGCCCACCACCATGT...GAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR TCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGGAATTCTCGAAGAGTaGAATCCACTAGCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDGILEE*NPLAGL Trigger: CAGGCCAGCTAGTGGATTTCACTCTTCGAGAATTCC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR TCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTGCATGGCATATTTGTaGAAGGCTGGACCTCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDCMAYL*KAGPRA Trigger: TGCTCGAGGTCCAGCCTTTCACAAATATGCCATGCA...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAACTGCTTTGAGGACTAGCTCAAAGCTAAGCTaGGGCTTGTGCTCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FSLRQSGWKTHCVTALRTSSKLS*GLCSLL Trigger: AAGGAGAGAGCACAAGCCTCAGCTTAGCTTTGAGCT...AGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAGGCACTATGAGCCATaGGTAAAGCTTTTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: QDKQQLQSAAEWLEDSLCRHYEP*VKLFGT Trigger: GGTGCCAAAAAGCTTTACCCATGGCTCATAGTGCCT...ACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAGCTGCACATTCTCCTTaGGAGGGAAACAAGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRAAHSP*EGNKVL Trigger: GAGGACCTTGTTTCCCTCCCAAGGAGAATGTGCAGC...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR TCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACCACTGTAACTTCTCCTaGTGCTTCCAGAACTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDHCNFS*CFQNSC Trigger: ACACGAGTTCTGGAAGCATCAGGAGAAGTTACAGTG...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR TCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAAGCTCAAAGCTAAGCTaGGGCTTGTGCTCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRSSKLS*GLCSLL Trigger: AAGGAGAGAGCACAAGCCTCAGCTTAGCTTTGAGCT...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACCCAGTCTTTGCCAACTaGGCAATCCTTAATGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDPVFAN*AILNGC Trigger: ACAGCCATTAAGGATTGCCCAGTTGGCAAAGACTGG...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAGCTGCAGCCTTCTTTTaGGAGAGTGCTTCTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRAAAFF*ESASWV Trigger: AACCCAAGAAGCACTCTCCCAAAAGAAGGCTGCAGC...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACAGGCACTATGAGCCATaGGTAAAGCTTTTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDRHYEP*VKLFGT Trigger: GGTGCCAAAAAGCTTTACCCATGGCTCATAGTGCCT...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTTGTGGACACAGTGTTaGTCAGTCAAGCTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDLWTQC*SVKLLS Trigger: AGAGAGGAGCTTGACTGACCAACACTGTGTCCACAA...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTTAAAGCCGACTCCTTaGGTCCACTTCCCATCACTT | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDLKPTP*VHFPSL Trigger: AAGTGATGGGAAGTGGACCCAAGGAGTCGGCTTTAA...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGTAAAATACTGGACATaGTGGTGGGCCTGGTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDVKYWT*WWAWLN Trigger: GTTCAACCAGGCCCACCACCATGTCCAGTATTTTAC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR TCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAATTATGCGGCAAGTTTaGCTGGTAGGCACTATGAGC | + |
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Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRIMRQV*LVGTMS Trigger: GCTCATAGTGCCTACCAGTCAAACTTGCCGCATAAT...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR GCA 90 bp | CAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTACAGCTGATGGCCATTaGTCCAAAATTTGTAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QDKQQLQSAAEWLEDSLCTADGH*SKICSS Trigger: ACTGCTACAAATTTTGGAGCAATGGCCATCAGCTGT...ACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR GCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGGCATCAGTATTATCTaGAAAGGAGCATCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDGISII*KGASGT Trigger: GGTTCCTGATGCTCCTTTGCAGATAATACTGATGCC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGATTGTGGACACAGTGTTaGTCAGTCAAGCTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRLWTQC*SVKLLS Trigger: AGAGAGGAGCTTGACTGACCAACACTGTGTCCACAA...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAACTGCTTTGAGGACGGGATCTGGAGTACTTaGCTCAAATACAGGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LQSAAEWLEDSLCNCFEDGIWST*LKYREI Trigger: AATTTCCCTGTATTTGAGCCAAGTACTCCAGATCCC...GTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTGGGTAGGAGACCTTTaGGGCAATTTGAATGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDWVGDL*GNLNVA Trigger: TGCTACATTCAAATTGCCCCAAAGGTCTCCTACCCA...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAGGCGCAGAGCCGTCTTaGCGAAGATTCCCACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTGAEPS*RRFPPR Trigger: GCGTGGTGGGAATCTTCGGCAAGACGGCTCTGCGCC...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAAGGAATAGCTTTATTTaGAGCAGGCCAGGAGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRRNSFI*SRPGVR Trigger: ACGAACTCCTGGCCTGCTCCAAATAAAGCTATTCCT...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTTCTTTTGGGAGAGTaGTTCTTGGGTTTATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRLLLGE*FLGLSG Trigger: TCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAG...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACACTTCATACAACTTTaGTGCTGCAGAGATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRHFIQL*CCRDPL Trigger: AAGTGGATCTCTGCAGCAGCAAAGTTGTATGAAGTG...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATTTCAGCCCTCTGCCCTaGGACGAGGACAGGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHFSPLP*DEDRMY Trigger: GTACATCCTGTCCTCGTCGCAGGGCAGAGGGCTGAA...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCTTGGGAGGGAAACAAGGTCCTCTCTCAGTCACATAGGCATAAGGAAATGGGTAAAGCTTTTTaGCACCGGTTTTCCGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSPWEGNKVLSQSHRHKEMGKAF*HRFSEN Trigger: ATTCTCGGAAAACCGGTGCCAAAAAGCTTTACCCAT...TTCCTTATGCCTATGTGACTGAGAGAGGACCTTGTTTCCCTCCCAAGGAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAGGGATCTGGAGTACTTaGCTCAAATACAGGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRGIWST*LKYREI Trigger: AATTTCCCTGTATTTGAGCCAAGTACTCCAGATCCC...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAACTGCTTTGAGGACTGATTTAGGTAAGGAATaGAATTTGTGGACACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSLRQSGWKTHCVTALRTDLGKE*NLWTQC Trigger: ACACTGTGTCCACAAATTTCATTCCTTACCTAAATC...AGTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS-3UTR GCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATTCCTCCAGGGCATGCTaGAGCCTTCTTTTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHSSRAC*SLLLGE Trigger: CTCTCCCAAAAGAAGGCTGCAGCATGCCCTGGAGGA...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACATCGTCTCGAGGTGCCTaGTTCCTTCCGCAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTSSRGA*FLPQLQ Trigger: CTGCAACTGCGGAAGGAAGCAGGCACCTCGAGACGA...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATGGGTTGTCTCCTCCTaGCTGTGGATCAGCGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTWVVSS*LWISGV Trigger: TACCCCGCTGATCCACAGGCAGGAGGAGACAACCCA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACCCTCCGCCTTCCTCTaGCCATCACAACTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTPSAFL*PSQLHF Trigger: GAAGTGCAGTTGTGATGGGCAGAGGAAGGCGGAGGG...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAGAAGTCCTGGGGACCTaGCTCAGCTCGGTTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTEVLGT*LSSVTF Trigger: GAAGGTAACCGAGCTGAGCCAGGTCCCCAGGACTTC...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATTGGAAGGAGAGCTGTTaGCGGCTGTGCTGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHWKESC*RLCCLI Trigger: GATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCA...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGATCTTATGGACTGTCATaGTGTAATTATGCGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRSYGLS*CNYAAS Trigger: ACTTGCCGCATAATTACACCATGACAGTCCATAAGA...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACATTGCCCGTGGACTTCTaGGTTGTCTCCTCCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTLPVDF*VVSSCL Trigger: CAGGCAGGAGGAGACAACCCAGAAGTCCACGGGCAA...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATACATGGTGGTGGGCCTaGTTGAACCTGAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHTWWWA*LNLRHQ Trigger: CTGATGCCTCAGGTTCAACCAGGCCCACCACCATGT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR TCA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAGATTTAGGTAAGGAATaGAATTTGTGGACACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTRQTAASVCGRVAGRDLGKE*NLWTQC Trigger: ACACTGTGTCCACAAATTTCATTCCTTACCTAAATC...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATACTTTGTCAGGCCCTaGGCACATGAACCTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTYFVRP*AHEPPT Trigger: GGTCGGAGGTTCATGTGCTCAGGGCCTGACAAAGTA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACATGGTCCTCCAGGGCATaGTGCAGCCTTCTTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTWSSRA*CSLLLG Trigger: TCCCAAAAGAAGGCTGCAGCATGCCCTGGAGGACCA...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATGACTTTCCTTCTCCTTaGCCGTGGACTTCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHDFPSP*PWTSGL Trigger: CAACCCAGAAGTCCACGGGCAAGGAGAAGGAAAGTC...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATAAAATGGGAAGGCTGTaGGTTCCTGCCCACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHKMGRL*VPAHTV Trigger: GACAGTGTGGGCAGGAACCCACAGCCTTCCCATTTT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAGGGAAACAAGGTCCTCTCTCAGTCACATAGGCATAAGGAAATCTCAACTTCGTGTAATTGCATaGCATATTTGTGAAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGRETRSSLSHIGIRKSQLRVIA*HICERL Trigger: CAGCCTTTCACAAATATGCCATGCAATTACACGAAG...TTGAGATTTCCTTATGCCTATGTGACTGAGAGAGGACCTTGTTTCCCTCCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATACCAGCTGGAGAATTTaGGTAGGAGACCTTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHTSWRI*VGDLWG Trigger: GCCCCAAAGGTCTCCTACCCAAATTCTCCAGCTGGT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGATTTCTTGTTTTTCTaGGTAAAATACTGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDDFLFF*VKYWTW Trigger: CCATGTCCAGTATTTTACCCAGAAAAACAAGAAATC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR TCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATCGTGTGTTTCTGCATaGGGTAAAGAGAGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTSCVSA*GKERPP Trigger: AGGGGGCCTCTCTTTACCTCATGCAGAAACACACGA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR TCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATTCAACTGTGGATGCCTaGCGGTCAACCAAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHSTVDA*RSTKFG Trigger: ACCAAACTTGGTTGACCGTCAGGCATCCACAGTTGA...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR GCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATAAGGCTGTGGGTTCCTaGCCACACTGTCATCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHKAVGS*PHCHQN Trigger: GTTTTGATGACAGTGTGGGCAGGAACCCACAGCCTT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATGTGAAATCCACTAGCTaGCCTGAAGAACTCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHVKSTS*PEELEV Trigger: CACCTCGAGTTCTTCAGGCCAGCTAGTGGATTTCAC...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATTTCTGGGTAAAATACTaGACATGGTGGTGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHFWVKY*TWWWAW Trigger: CCAGGCCCACCACCATGTCCAGTATTTTACCCAGAA...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR TCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATAGACAGCTTTGGTCTTaGTTCCAGTTCCTGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHRQLWS*FQFLDL Trigger: GAGATCCAGGAACTGGAATCAAGACCAAAGCTGTCT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAAGGGCCCCATTGAGTTaGAAGAGGAAGAGGAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTRAPLS*KRKRSL Trigger: TAGACTCCTCTTCCTCTTTCAACTCAATGGGGCCCT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR TCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATGCATGGCATATTTGTaGAAGGCTGGACCTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTCMAYL*KAGPRA Trigger: TGCTCGAGGTCCAGCCTTTCACAAATATGCCATGCA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACTCTCTTCGCACAGCTaGTGGCCATTGCTCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTLSSHS*WPLLQN Trigger: ATTTTGGAGCAATGGCCATCAGCTGTGCGAAGAGAG...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATAGGCTATCTGTTGACTaGCCCAAGCTCAAAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHRLSVD*PKLKAK Trigger: CTTAGCTTTGAGCTTGGGCCAGTCAACAGATAGCCT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAATTATGCGGCAAGTTTaGCTGGTAGGCACTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTIMRQV*LVGTMS Trigger: GCTCATAGTGCCTACCAGTCAAACTTGCCGCATAAT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACTTGATTCCAGTTCCTaGATCTCCAGGATCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTLDSSS*ISRILM Trigger: CATCAGGATCCTGGAGATCCAGGAACTGGAATCAAG...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATGGGAGAGTGCTTCTTaGGTTTATCTGGATGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTWESAS*VYLDEL Trigger: CAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACAATGGCTCCTAAGCTaGTCCAGCAACATGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTQWLLS*SSNMPI Trigger: AATTGGCATGTTGCTGGACCAGCTTAGGAGCCATTG...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAAGGCTATCTGTTGACTaGCCCAAGCTCAAAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTRLSVD*PKLKAK Trigger: CTTAGCTTTGAGCTTGGGCCAGTCAACAGATAGCCT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAGTAAAATACTGGACATaGTGGTGGGCCTGGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTVKYWT*WWAWLN Trigger: GTTCAACCAGGCCCACCACCATGTCCAGTATTTTAC...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATCAGGTGGGAGAGTaGTTTCTTGTTTTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTHQVGE*FLVFLG Trigger: ACCCAGAAAAACAAGAAATCACTCTCCCACCTGATG...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATATGTACACAAAAGCTTaGTTGGCAGGTACCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHMYTKA*LAGTVK Trigger: CTTTACGGTACCTGCCAACCAAGCTTTTGTGTACAT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACATCCACTTCTGGTAAGTaGGCAGTTCAAAATGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTSTSGK*AVQNGK Trigger: CTTCCCATTTTGAACTGCCCACTTACCAGAAGTGGA...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAACGGTCAACCAAGTTTaGTCTCTTCTCAGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTTVNQV*SLLRLS Trigger: GGAAAGTCTGAGAAGAGACCAAACTTGGTTGACCGT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAAAGATAGTTTGTTCCTaGAACGAAGCCCTGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTKIVCS*NEALLV Trigger: GACCAACAGGGCTTCGTTCCAGGAACAAACTATCTT...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR TCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAATACACGATCATAAGTaGTGTCAAAGGAACACGTCG | + |
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Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTIHDHK*CQRNTS Trigger: CGACGTGTTCCTTTGACATCACTTATGATCGTGTAT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR GCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAACAGCTGATGGCCATTaGTCCAAAATTTGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTTADGH*SKICSS Trigger: ACTGCTACAAATTTTGGAGCAATGGCCATCAGCTGT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR GCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAATATTCAACTGTGGATaGCTGACGGTCAACCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTIFNCG*LTVNQV Trigger: AACTTGGTTGACCGTCAGGCATCCACAGTTGAATAT...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAATGGGTAAAGCTTTTTaGCACCGGTTTTCCGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IVQILNTCNQNTLGFGKTMGKAF*HRFSEN Trigger: ATTCTCGGAAAACCGGTGCCAAAAAGCTTTACCCAT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR GCA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATAATTTGAATGTAGCATaGCTGGGAGATATTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHNLNVA*LGDIQL Trigger: CAGTTGAATATCTCCCAGGCATGCTACATTCAAATT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATCTTATGGACTGTCATaGTGTAATTATGCGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTSYGLS*CNYAAS Trigger: ACTTGCCGCATAATTACACCATGACAGTCCATAAGA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACTTCGTGTAATTGCATaGCATATTTGTGAAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTLRVIA*HICERL Trigger: CAGCCTTTCACAAATATGCCATGCAATTACACGAAG...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAGATTTCTTGTTTTTCTaGGTAAAATACTGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTDFLFF*VKYWTW Trigger: CCATGTCCAGTATTTTACCCAGAAAAACAAGAAATC...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS CCA 90 bp | GGTCGTCTCGAGGTGCCTGCTTCCTTCCGCAGTTGCAGGCTCCGGTaGATCGGGCTCGGCTATTGTGGTAGAGCACAGGAGGGTTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GRLEVPASFRSCRLR*IGLGYCGRAQEGSY Trigger: ATAGGAACCCTCCTGTGCTCTACCACAATAGCCGAGCCCGATCCACCGGAGCCTGCAACTGCGGAAGGAAGCAGGCACCTCGAGACGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS GCA 90 bp | CTCGAGGTGCTGCTATCAATGTGGAAGGAGAGCTGTTGGCGGCTGTaGTGTCTCATCGCTTGGTACCGCCTAGGTCCAGAAAGGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LEVLLSMWKESCWRL*CLIAWYRLGPERGA Trigger: CGCACCCCTTTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGATAGCAGCACCTCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | TCAATGTGGAAGGAGAGCTGTTGGCGGCTGTGCTGTCTCATCGCTTaGTACCGCCTAGGTCCAGAAAGGGGTGCGGGCACCAACAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: SMWKESCWRLCCLIA*YRLGPERGAGTNND Trigger: ATCGTTGTTGGTGCCCGCACCCCTTTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS GCA 90 bp | GCTGTGCTGTCTCATCGCTTGGTACCGCCTAGGTCCAGAAAGGGGTaGGGGCACCAACAACGATTCTGGGTCTTTCACGGTACAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVLSHRLVPPRSRKG*GHQQRFWVFHGTMA Trigger: AGCCATTGTACCGTGAAAGACCCAGAATCGTTGTTGGTGCCCGCACCCCTTTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | GGTCCTCCAGGGCATGCTGCAGCCTTCTTTTGGGAGAGTGCTTCTTaGGTTTATCTGGATGAGCTGTATCCTGGCTCCGAGGCGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPPGHAAAFFWESAS*VYLDELYPGSEAVP Trigger: TGGAACCGCCTCGGAGCCAGGATACAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAGGCTGCAGCATGCCCTGGAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | AGGGGTGCGGGCACCAACAACGATTCTGGGTCTTTCACGGTACAATaGCTCCTAAGCTGGTCCAGCAACATGCCAATTGGGTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RGAGTNNDSGSFTVQ*LLSWSSNMPIGSSS Trigger: GGAGGAGGACCCAATTGGCATGTTGCTGGACCAGCTTAGGAGCCATTGTACCGTGAAAGACCCAGAATCGTTGTTGGTGCCCGCACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS TCA 90 bp | GTATCCTGGCTCCGAGGCGGTTCCACCTTAAGGGCCCCATTGAGTTaGAAGAGGAAGAGGAGTCTAGGTGGGCAAGGTCGGCAGTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: VSWLRGGSTLRAPLS*KRKRSLGGQGRQFN Trigger: GTTAAACTGCCGACCTTGCCCACCTAGACTCCTCTTCCTCTTTCAACTCAATGGGGCCCTTAAGGTGGAACCGCCTCGGAGCCAGGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS TCA 90 bp | TGCTGCAGCCTTCTTTTGGGAGAGTGCTTCTTGGGTTTATCTGGATaGGCTGTATCCTGGCTCCGAGGCGGTTCCACCTTAAGGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CCSLLLGECFLGLSG*AVSWLRGGSTLRAP Trigger: TGGGGCCCTTAAGGTGGAACCGCCTCGGAGCCAGGATACAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAGGCTGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | TTCCTGATTGTAATAGGCCTGCAAAAGACTGAAGTCCTGGGGACCTaGCTCAGCTCGGTTACCTTCCGCCGTAGCCATACCTCCGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLIVIGLQKTEVLGT*LSSVTFRRSHTSAK Trigger: CTTCGCGGAGGTATGGCTACGGCGGAAGGTAACCGAGCTGAGCCAGGTCCCCAGGACTTCAGTCTTTTGCAGGCCTATTACAATCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | GGCATGCTGCAGCCTTCTTTTGGGAGAGTGCTTCTTGGGTTTATCTaGATGAGCTGTATCCTGGCTCCGAGGCGGTTCCACCTTAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMLQPSFGRVLLGFI*MSCILAPRRFHLKG Trigger: GCCCTTAAGGTGGAACCGCCTCGGAGCCAGGATACAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAGGCTGCAGCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | TGGCTCCTAAGCTGGTCCAGCAACATGCCAATTGGGTCCTCCTCCTaGCTTCCGGGGACTATGTACACAAAAGCTTGGTTGGCAGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: WLLSWSSNMPIGSSS*LPGTMYTKAWLAGT Trigger: GGTACCTGCCAACCAAGCTTTTGTGTACATAGTCCCCGGAAGCCAGGAGGAGGACCCAATTGGCATGTTGCTGGACCAGCTTAGGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | ACCAACAACGATTCTGGGTCTTTCACGGTACAATGGCTCCTAAGCTaGTCCAGCAACATGCCAATTGGGTCCTCCTCCTGGCTTCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TNNDSGSFTVQWLLS*SSNMPIGSSSWLPG Trigger: CCCCGGAAGCCAGGAGGAGGACCCAATTGGCATGTTGCTGGACCAGCTTAGGAGCCATTGTACCGTGAAAGACCCAGAATCGTTGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | GTACCGCCTAGGTCCAGAAAGGGGTGCGGGCACCAACAACGATTCTaGGTCTTTCACGGTACAATGGCTCCTAAGCTGGTCCAGCAACAT | + |
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Preference number: 5 (lower is better) Translates to: VPPRSRKGCGHQQRF*VFHGTMAPKLVQQH Trigger: ATGTTGCTGGACCAGCTTAGGAGCCATTGTACCGTGAAAGACCCAGAATCGTTGTTGGTGCCCGCACCCCTTTCTGGACCTAGGCGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | CCTGAAGAACTCGAGGTGCTGCTATCAATGTGGAAGGAGAGCTGTTaGCGGCTGTGCTGTCTCATCGCTTGGTACCGCCTAGGTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: PEELEVLLSMWKESC*RLCCLIAWYRLGPE Trigger: TTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGATAGCAGCACCTCGAGTTCTTCAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | TTGGGTTTGAGGTTCTTTCTCCTTCAGTTTCTCGGCGTCCGAGTCTaGCGGGGCAGGAGAGGGTTCATTTTTAGCAGGAGCGGGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGLRFFLLQFLGVRV*RGRRGFIFSRSGIW Trigger: CCAGATCCCGCTCCTGCTAAAAATGAACCCTCTCCTGCCCCGCCAGACTCGGACGCCGAGAAACTGAAGGAGAAAGAACCTCAAACCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS GCA 90 bp | GGCTCGAGCTATGTCATCCCTCCGCCTTCCTCTGCCCATCACAACTaGACTTCTCTTCCCAGGAATAGCTTTATTTGGAGCAGGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: GSSYVIPPPSSAHHN*TSLPRNSFIWSRPG Trigger: TCCTGGCCTGCTCCAAATAAAGCTATTCCTGGGAAGAGAAGTGCAGTTGTGATGGGCAGAGGAAGGCGGAGGGATGACATAGCTCGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | TCCTCGGAGCACCTTGTAGCTCATGAGCTGCACATTCTCCTTGGGAGGGAAACATGGTGGTGGGCCTGGTaGAACCTAGGCTATCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSEHLVAHELHILLGRETWWWAW*NLGYLL Trigger: CAACAGATAGCCTAGGTTCAACCAGGCCCACCACCA...TGTTTCCCTCCCAAGGAGAATGTGCAGCTCATGAGCTACAAGGTGCTCCGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS CCA 90 bp | TCCCGCCTCTCCGACAGAGACAGCTTTGGTCTTGATTCCAGTTCCTaGATCTCCAGGATCCTGATGGTGAAAGAGTGGGAAAACCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRLSDRDSFGLDSSS*ISRILMVKEWENLS Trigger: CGACAGGTTTTCCCACTCTTTCACCATCAGGATCCTGGAGATCCAGGAACTGGAATCAAGACCAAAGCTGTCTCTGTCGGAGAGGCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | AAATCCACTAGCTGGCCTGAAGAACTCGAGGTGCTGCTATCAATGTaGAAGGAGAGCTGTTGGCGGCTGTGCTGTCTCATCGCTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KSTSWPEELEVLLSM*KESCWRLCCLIAWY Trigger: GTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGATAGCAGCACCTCGAGTTCTTCAGGCCAGCTAGTGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGAGAACTTCTCGGAGTaGAGGCGCAGAGCCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDENFSE*RRRAVL Trigger: CAAGACGGCTCTGCGCCTCAACTCCGAGAAGTTCTC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS TCA 90 bp | TCCGGCTTCACCGCTCTGGAGGGCCCGACAAGCACGCAGAAGCTGTaGGTTGTCACAGATGGAAGTGAGAATAAGATACAGAACTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGFTALEGPTSTQKL*VVTDGSENKIQNFA Trigger: AGCAAAGTTCTGTATCTTATTCTCACTTCCATCTGTGACAACTCACAGCTTCTGCGTGCTTGTCGGGCCCTCCAGAGCGGTGAAGCCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS TCA 90 bp | TGCTTAGGACCAGCTCCACGTGCTGCCACAGGAATTCTCGAAGAGTaGAATCCACTAGCTGGCCTGAAGAACTCGAGGTGCTGCTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLGPAPRAATGILEE*NPLAGLKNSRCCYQ Trigger: TTGATAGCAGCACCTCGAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGAGAATTCCTGTGGCAGCACGTGGAGCTGGTCCTAAGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | TTTCACGGTACAATGGCTCCTAAGCTGGTCCAGCAACATGCCAATTaGGTCCTCCTCCTGGCTTCCGGGGACTATGTACACAAAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHGTMAPKLVQQHAN*VLLLASGDYVHKSL Trigger: CAAGCTTTTGTGTACATAGTCCCCGGAAGCCAGGAGGAGGACCCAATTGGCATGTTGCTGGACCAGCTTAGGAGCCATTGTACCGTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | TCCACGTGCTGCCACAGGAATTCTCGAAGAGTGAAATCCACTAGCTaGCCTGAAGAACTCGAGGTGCTGCTATCAATGTGGAAGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: STCCHRNSRRVKSTS*PEELEVLLSMWKES Trigger: GCTCTCCTTCCACATTGATAGCAGCACCTCGAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGAGAATTCCTGTGGCAGCACGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACCAGCAACATGCCAATaGGGTCCTCCTCCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSKTRQTAASVCGRVAGRPATCQ*GPPPGF Trigger: GAAGCCAGGAGGAGGACCCAATTGGCATGTTGCTGG...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | TGCTTTGAGGACTCCTCGGAGCACCTTGTAGCTCATGAGCTGCACATTCTCCTTGCTTGTGCTCTCTCCTaGGGTTTGAGGTTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CFEDSSEHLVAHELHILLACALS*GLRFFL Trigger: GAGAAAGAACCTCAAACCCAAGGAGAGAGCACAAGC...AAGGAGAATGTGCAGCTCATGAGCTACAAGGTGCTCCGAGGAGTCCTCAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACAGGGGCATGTCACTGTaGAGGGCTTTTAAAGCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDRGMSL*RAFKAD Trigger: GTCGGCTTTAAAAGCCCTCAACAGTGACATGCCCCT...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | AGATTCTATAGATCTGGTCCTCCAGGGCATGCTGCAGCCTTCTTTTaGGAGAGTGCTTCTTGGGTTTATCTGGATGAGCTGTATCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFYRSGPPGHAAAFF*ESASWVYLDELYPG Trigger: GCCAGGATACAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAGGCTGCAGCATGCCCTGGAGGACCAGATCTATAGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACCGCAGAAGCTGTGAGTaGTCACAGATGGAAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDRRSCE*SQMEVR Trigger: TCTCACTTCCATCTGTGACAACTCACAGCTTCTGCG...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | TGCTTTGAGGACTCCTCGGAGCACCTTGTAGCTCATGAGCTGCACATTCTCCTTCGGGATCTGGAGTACTaGGCTCAAATACAGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CFEDSSEHLVAHELHILLRDLEY*AQIQGN Trigger: ATTTCCCTGTATTTGAGCCAAGTACTCCAGATCCCG...AAGGAGAATGTGCAGCTCATGAGCTACAAGGTGCTCCGAGGAGTCCTCAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS GCA 90 bp | GCCCAAGTCCTCTTCCTTCCCATCGATAGCCACTTCATACAACTTTaGTGCTGCAGAGATCCACTTCTGGTAAGTGGGCAGTTCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: AQVLFLPIDSHFIQL*CCRDPLLVSGQFKM Trigger: CATTTTGAACTGCCCACTTACCAGAAGTGGATCTCTGCAGCAGCAAAGTTGTATGAAGTGGCTATCGATGGGAAGGAAGAGGACTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 90 bp | TGGGAGAGTGATTTCTTGTTTTTCTGGGTAAAATACTGGACATGGTaGTGGGCCTGGTTGAACCTAGGCTATCTGTTGACTGGCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WESDFLFFWVKYWTW*WAWLNLGYLLTGPS Trigger: GCTTGGGCCAGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS CCA 90 bp | AGGTGGGAGAGTGATTTCTTGTTTTTCTGGGTAAAATACTGGACATaGTGGTGGGCCTGGTTGAACCTAGGCTATCTGTTGACTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RWESDFLFFWVKYWT*WWAWLNLGYLLTGP Trigger: TGGGCCAGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTCCCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CAA 90 bp | CTTCAGTCTGCGGCAGAGTGGCTGGAAGACTCATTGTGTAACTGCTTTGAGGACAATTATGCGGCAAGTTaGACTGGTAGGCACTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQSAAEWLEDSLCNCFEDNYAAS*TGRHYE Trigger: CTCATAGTGCCTACCAGTCAAACTTGCCGCATAATT...GTCCTCAAAGCAGTTACACAATGAGTCTTCCAGCCACTCTGCCGCAGACTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACCGGGATCTGGAGTACTaGGCTCAAATACAGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDRDLEY*AQIQGN Trigger: ATTTCCCTGTATTTGAGCCAAGTACTCCAGATCCCG...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CAA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGATTTAAAGCCGACTCCTaGGGTCCACTTCCCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: TSKTRQTAASVCGRVAGRFKADS*GPLPIT Trigger: AGTGATGGGAAGTGGACCCAAGGAGTCGGCTTTAAA...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS GCA 90 bp | CAAGTCCTCTTCCTTCCCATCGATAGCCACTTCATACAACTTTGCTaGTGCAGAGATCCACTTCTGGTAAGTGGGCAGTTCAAAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVLFLPIDSHFIQLC*CRDPLLVSGQFKMG Trigger: TCCCATTTTGAACTGCCCACTTACCAGAAGTGGATCTCTGCAGCAGCAAAGTTGTATGAAGTGGCTATCGATGGGAAGGAAGAGGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS GCA 90 bp | TGGAGAATTTGGGTAGGAGACCTTTGGGGCAATTTGAATGTAGCATaGCTGGGAGATATTCAACTGTGGATGCCTGACGGTCAACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WRIWVGDLWGNLNVA*LGDIQLWMPDGQPS Trigger: ACTTGGTTGACCGTCAGGCATCCACAGTTGAATATCTCCCAGGCATGCTACATTCAAATTGCCCCAAAGGTCTCCTACCCAAATTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 90 bp | CTTGATTCCAGTTCCTGGATCTCCAGGATCCTGATGGTGAAAGAGTaGGAAAACCTGTCGATCGCACACAGTATTCACCAGAGAGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LDSSSWISRILMVKE*ENLSIAHSIHQREL Trigger: AAGTTCTCTCTGGTGAATACTGTGTGCGATCGACAGGTTTTCCCACTCTTTCACCATCAGGATCCTGGAGATCCAGGAACTGGAATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 90 bp | GAGAGTGATTTCTTGTTTTTCTGGGTAAAATACTGGACATGGTGGTaGGCCTGGTTGAACCTAGGCTATCTGTTGACTGGCCCAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ESDFLFFWVKYWTWW*AWLNLGYLLTGPSS Trigger: TGAGCTTGGGCCAGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACAATTATGCGGCAAGTTaGACTGGTAGGCACTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDNYAAS*TGRHYE Trigger: CTCATAGTGCCTACCAGTCAAACTTGCCGCATAATT...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CAA 90 bp | ACATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGAGACGGTCAACCAAGTTaGGTCTCTTCTCAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSKTRQTAASVCGRVAGRDGQPS*VSSQTF Trigger: GAAAGTCTGAGAAGAGACCAAACTTGGTTGACCGTC...TCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS TCA 90 bp | AGGCATAAGGAAATCTCAAGACCCAAAGGCCATCAGGTGGGAGAGTaGTTTCTTGTTTTTCTGGGTAAAATACTGGACATGGTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHKEISRPKGHQVGE*FLVFLGKILDMVVG Trigger: GCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTCCCACCTGATGGCCTTTGGGTCTTGAGATTTCCTTATGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 90 bp | TGTATACCCGAAGAGCCTGAGCAAGCTGATTCTTATGGACTGTCATaGTGTAATTATGCGGCAAGTTTGACTGGTAGGCACTATGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CIPEEPEQADSYGLS*CNYAASLTGRHYEP Trigger: TGGCTCATAGTGCCTACCAGTCAAACTTGCCGCATAATTACACCATGACAGTCCATAAGAATCAGCTTGCTCAGGCTCTTCGGGTATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS CCA 90 bp | CTTTGGGGCAATTTGAATGTAGCATGCCTGGGAGATATTCAACTGTaGATGCCTGACGGTCAACCAAGTTTGGTCTCTTCTCAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWGNLNVACLGDIQL*MPDGQPSLVSSQTF Trigger: GAAAGTCTGAGAAGAGACCAAACTTGGTTGACCGTCAGGCATCCACAGTTGAATATCTCCCAGGCATGCTACATTCAAATTGCCCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 90 bp | GCCATCAGGTGGGAGAGTGATTTCTTGTTTTTCTGGGTAAAATACTaGACATGGTGGTGGGCCTGGTTGAACCTGAGGCATCAGTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: AIRWESDFLFFWVKY*TWWWAWLNLRHQYY Trigger: ATAATACTGATGCCTCAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTCCCACCTGATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 90 bp | GATTTCTTGTTTTTCTGGGTAAAATACTGGACATGGTGGTGGGCCTaGTTGAACCTAGGCTATCTGTTGACTGGCCCAAGCTCAAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: DFLFFWVKYWTWWWA*LNLGYLLTGPSSKL Trigger: TAGCTTTGAGCTTGGGCCAGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAAGGCGCAGAGCCGTCTaGCCGAAGATTCCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: IVQILNTCNQNTLGFGKTRRRAV*PKIPTT Trigger: CGTGGTGGGAATCTTCGGCAAGACGGCTCTGCGCCT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS GCA 90 bp | AGTGTTGGTCAGTCAAGCTCCTCTCTTCGCACAGCTGATGGCCATTaGTCCAAAATTTGTAGCAGTCTTCGTGTAATTGCATGGCATATT | + |
|
Preference number: 5 (lower is better) Translates to: SVGQSSSSLRTADGH*SKICSSLRVIAWHI Trigger: AATATGCCATGCAATTACACGAAGACTGCTACAAATTTTGGAGCAATGGCCATCAGCTGTGCGAAGAGAGGAGCTTGACTGACCAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CAA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATGTGGAAGGAGAGCTGTaGGCGGCTGTGCTGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHVEGEL*AAVLSH Trigger: ATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCAC...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACGGTTTTCCGAGAATTTaGTGTCTATATCCAAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDGFPRI*CLYPKT Trigger: GGTTTTTGGATATAGACACAAAATTCTCGGAAAACC...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS-3UTR CAA 90 bp | CATCAAAAACAAGACAAACAGCAGCTTCAGTCTGCGGCAGAGTGGCTGGAAGACTGGGAGAGTGATTTCTaGTTTTTCTGGGTAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: HQKQDKQQLQSAAEWLEDWESDF*FFWVKY Trigger: GTATTTTACCCAGAAAAACAAGAAATCACTCTCCCA...GTCTTCCAGCCACTCTGCCGCAGACTGAAGCTGCTGTTTGTCTTGTTTTTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS CCA 90 bp | TCTAGTCCTGATGACAATGTCCCAAGGCATAAGATAGTTTGTTCCTaGAACGAAGCCCTGTTGGTCCAAACCTGTATGAAAGTTGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPDDNVPRHKIVCS*NEALLVQTCMKVVR Trigger: TCTTACAACTTTCATACAGGTTTGGACCAACAGGGCTTCGTTCCAGGAACAAACTATCTTATGCCTTGGGACATTGTCATCAGGACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 90 bp | AGTCACATAGGCATAAGGAAATCTCAAGACCCAAAGGCCATCAGGTaGGAGAGTGATTTCTTGTTTTTCTGGGTAAAATACTGGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: SHIGIRKSQDPKAIR*ESDFLFFWVKYWTW Trigger: CCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTCCCACCTGATGGCCTTTGGGTCTTGAGATTTCCTTATGCCTATGTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAGACCAGCTGGAGAATTaGGGTAGGAGACCTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTDQLEN*GRRPLG Trigger: CCCCAAAGGTCTCCTACCCAAATTCTCCAGCTGGTC...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATGGTGGTGGGCCTGGTaGAACCTGAGGCATCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTWWWAW*NLRHQY Trigger: ATACTGATGCCTCAGGTTCAACCAGGCCCACCACCA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATGCTGCAGCCTTCTTTaGGGAGAGTGCTTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTCCSLL*GECFLG Trigger: ACCCAAGAAGCACTCTCCCAAAAGAAGGCTGCAGCA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAAGCTGCACATTCTCCTaGGGAGGGAAACAAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IVQILNTCNQNTLGFGKTSCTFS*GGKQGP Trigger: AGGACCTTGTTTCCCTCCCAAGGAGAATGTGCAGCT...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATGAGACAGCTTTGGTCTaGATTCCAGTTCCTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHETALV*IPVPGS Trigger: AGATCCAGGAACTGGAATCAAGACCAAAGCTGTCTC...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACCGACAGAGACAGCTTaGGTCTTGATTCCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTPTETA*VLIPVP Trigger: AGGAACTGGAATCAAGACCAAAGCTGTCTCTGTCGG...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACAGCTTGTGCTCTCTCCTaGGGTTTGAGGTTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IVQILNTCNQNTLGFGKTACALS*GLRFFL Trigger: GAGAAAGAACCTCAAACCCAAGGAGAGAGCACAAGC...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAGACCTTTGGGGCAATTaGAATGTAGCATGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTDLWGN*NVACLG Trigger: TCCCAGGCATGCTACATTCAAATTGCCCCAAAGGTC...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACATTGGGTAGGAGACCTTaGGGGCAATTTGAATGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: IVQILNTCNQNTLGFGKTLGRRP*GQFECS Trigger: GCTACATTCAAATTGCCCCAAAGGTCTCCTACCCAA...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACATGGAACGAAGCCCTGTaGGTCCAAACCTGTATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTWNEAL*VQTCMK Trigger: TTTCATACAGGTTTGGACCAACAGGGCTTCGTTCCA...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACATCCTTAATGGCTGTTTaGAGGAGGGGTAGTACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVQILNTCNQNTLGFGKTSLMAV*RRGSTF Trigger: GAAAGTACTACCCCTCCTCAAAACAGCCATTAAGGA...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCAAATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACATTTAACTTCCAGTCTTaGCCAACTGGGCAATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: IVQILNTCNQNTLGFGKTFNFQS*PTGQSL Trigger: TAAGGATTGCCCAGTTGGCAAAGACTGGAAGTTAAA...TGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTATTTGGACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | CTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACACATAAAAAGCCTCATAAGTaGAGCATAATGTGGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LNTCNQNTLGFGKTQYTHKKPHK*SIMWLQ Trigger: CTGAAGCCACATTATGCTCAACTTATGAGGCTTTTT...ATGTGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATACTTGTAACCAAAACACATTGGGTTTTGGGAAGACACAGTATACAGGTTTTCCGAGAATTTaGTGTCTATATCCAAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCNQNTLGFGKTQYTGFPRI*CLYPKT Trigger: GGTTTTTGGATATAGACACAAAATTCTCGGAAAACC...TGTATACTGTGTCTTCCCAAAACCCAATGTGTTTTGGTTACAAGTATTCAGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS GCA 72 bp | AGGGGTCGTCTCGAGGTGCCTGCTTCCTTCCGCAGTTaGAGGCTCCGGTGGATCGGGCTCGGCTATTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGRLEVPASFRS*RLRWIGLGYCG Trigger: ACCACAATAGCCGAGCCCGATCCACCGGAGCCTGCAACTGCGGAAGGAAGCAGGCACCTCGAGACGACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS CAA 72 bp | AAGGGGTCGTCTCGAGGTGCCTGCTTCCTTCCGCAGTaGCAGGCTCCGGTGGATCGGGCTCGGCTATTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KGSSRGACFLPQ*QAPVDRARLLW Trigger: CCACAATAGCCGAGCCCGATCCACCGGAGCCTGCAACTGCGGAAGGAAGCAGGCACCTCGAGACGACCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS GCA 72 bp | GCAGCCTTGATATCGAAGGGGTCGTCTCGAGGTGCCTaGTTCCTTCCGCAGTTGCAGGCTCCGGTGGATCGG | + |
|
Preference number: 6 (lower is better) Translates to: AALISKGSSRGA*FLPQLQAPVDR Trigger: CCGATCCACCGGAGCCTGCAACTGCGGAAGGAAGCAGGCACCTCGAGACGACCCCTTCGATATCAAGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS CCA 72 bp | AAGGAGAGCTGTTGGCGGCTGTGCTGTCTCATCGCTTaGTACCGCCTAGGTCCAGAAAGGGGTGCGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: KESCWRLCCLIA*YRLGPERGAGT Trigger: GGTGCCCGCACCCCTTTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 72 bp | GAAGGAGAGCTGTTGGCGGCTGTGCTGTCTCATCGCTaGGTACCGCCTAGGTCCAGAAAGGGGTGCGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: EGELLAAVLSHR*VPPRSRKGCGH Trigger: GTGCCCGCACCCCTTTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS GCA 72 bp | GTTAGCAGCCTTGATATCGAAGGGGTCGTCTCGAGGTaGCTGCTTCCTTCCGCAGTTGCAGGCTCCGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VSSLDIEGVVSR*LLPSAVAGSGG Trigger: TCCACCGGAGCCTGCAACTGCGGAAGGAAGCAGGCACCTCGAGACGACCCCTTCGATATCAAGGCTGCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS CAA 90 bp | GTATTCACCAGAGAGAACTTCTCGGAGTTGAGGCGCAGAGCCGTCTaGCCGAAGATTCCCACCACGCAGATCTCATCCTCCCTCCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: VFTRENFSELRRRAV*PKIPTTQISSSLHG Trigger: CCCGTGGAGGGAGGATGAGATCTGCGTGGTGGGAATCTTCGGCAAGACGGCTCTGCGCCTCAACTCCGAGAAGTTCTCTCTGGTGAATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 90 bp | ATCAATGTGGAAGGAGAGCTGTTGGCGGCTGTGCTGTCTCATCGCTaGGTACCGCCTAGGTCCAGAAAGGGGTGCGGGCACCAACAACGA | + |
|
Preference number: 6 (lower is better) Translates to: INVEGELLAAVLSHR*VPPRSRKGCGHQQR Trigger: TCGTTGTTGGTGCCCGCACCCCTTTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 72 bp | TCTCCGGCTCCTCCCGCCTCTCCGACAGAGACAGCTTaGGTCTTGATTCCAGTTCCTGGATCTCCAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SPAPPASPTETA*VLIPVPGSPGS Trigger: GGATCCTGGAGATCCAGGAACTGGAATCAAGACCAAAGCTGTCTCTGTCGGAGAGGCGGGAGGAGCCGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 90 bp | CCTCTGCCCTGCGACGAGGACAGGATGTACAGGGGCATGTCACTGTaGAGGGCTTTTAAAGCCGACTCCTTGGGTCCACTTCCCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: PLPCDEDRMYRGMSL*RAFKADSLGPLPIT Trigger: AGTGATGGGAAGTGGACCCAAGGAGTCGGCTTTAAAAGCCCTCAACAGTGACATGCCCCTGTACATCCTGTCCTCGTCGCAGGGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | GTAATAGGCCTGCAAAAGACTGAAGTCCTGGGGACCTaGCTCAGCTCGGTTACCTTCCGCCGTAGCCATACC | + |
|
Preference number: 6 (lower is better) Translates to: VIGLQKTEVLGT*LSSVTFRRSHT Trigger: GGTATGGCTACGGCGGAAGGTAACCGAGCTGAGCCAGGTCCCCAGGACTTCAGTCTTTTGCAGGCCTATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | CTTCTCAGACTTTCCTTCTCCTTGCCCGTGGACTTCTaGGTTGTCTCCTCCTGCCTGTGGATCAGCGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LLRLSFSLPVDF*VVSSCLWISGV Trigger: TACCCCGCTGATCCACAGGCAGGAGGAGACAACCCAGAAGTCCACGGGCAAGGAGAAGGAAAGTCTGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 72 bp | AGAGAGAACTTCTCGGAGTTGAGGCGCAGAGCCGTCTaGCCGAAGATTCCCACCACGCAGATCTCATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RENFSELRRRAV*PKIPTTQISSS Trigger: GGAGGATGAGATCTGCGTGGTGGGAATCTTCGGCAAGACGGCTCTGCGCCTCAACTCCGAGAAGTTCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 72 bp | ACTCGAGGTGCTGCTATCAATGTGGAAGGAGAGCTGTaGGCGGCTGTGCTGTCTCATCGCTTGGTACCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TRGAAINVEGEL*AAVLSHRLVPP Trigger: AGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGATAGCAGCACCTCGAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS TCA 72 bp | CTCCTCCCGCCTCTCCGACAGAGACAGCTTTGGTCTTaGTTCCAGTTCCTGGATCTCCAGGATCCTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLPPLRQRQLWS*FQFLDLQDPDG Trigger: ACCATCAGGATCCTGGAGATCCAGGAACTGGAATCAAGACCAAAGCTGTCTCTGTCGGAGAGGCGGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS TCA 72 bp | CCAGCTCCACGTGCTGCCACAGGAATTCTCGAAGAGTaGAATCCACTAGCTGGCCTGAAGAACTCGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PAPRAATGILEE*NPLAGLKNSRC Trigger: GCACCTCGAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGAGAATTCCTGTGGCAGCACGTGGAGCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS GCA 72 bp | CTGCTATCAATGTGGAAGGAGAGCTGTTGGCGGCTGTaGTGTCTCATCGCTTGGTACCGCCTAGGTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLSMWKESCWRL*CLIAWYRLGPE Trigger: TTCTGGACCTAGGCGGTACCAAGCGATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGATAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | ACAATGGCTCCTAAGCTGGTCCAGCAACATGCCAATTaGGTCCTCCTCCTGGCTTCCGGGGACTATGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: TMAPKLVQQHAN*VLLLASGDYVH Trigger: GTGTACATAGTCCCCGGAAGCCAGGAGGAGGACCCAATTGGCATGTTGCTGGACCAGCTTAGGAGCCATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 72 bp | AGGTCCAGAAAGGGGTGCGGGCACCAACAACGATTCTaGGTCTTTCACGGTACAATGGCTCCTAAGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSRKGCGHQQRF*VFHGTMAPKLV Trigger: GACCAGCTTAGGAGCCATTGTACCGTGAAAGACCCAGAATCGTTGTTGGTGCCCGCACCCCTTTCTGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 72 bp | AGCTGGCCTGAAGAACTCGAGGTGCTGCTATCAATGTaGAAGGAGAGCTGTTGGCGGCTGTGCTGTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SWPEELEVLLSM*KESCWRLCCLI Trigger: GATGAGACAGCACAGCCGCCAACAGCTCTCCTTCCACATTGATAGCAGCACCTCGAGTTCTTCAGGCCAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | AGGTTCTTTCTCCTTCAGTTTCTCGGCGTCCGAGTCTaGCGGGGCAGGAGAGGGTTCATTTTTAGCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFFLLQFLGVRV*RGRRGFIFSRS Trigger: GCTCCTGCTAAAAATGAACCCTCTCCTGCCCCGCCAGACTCGGACGCCGAGAAACTGAAGGAGAAAGAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS CCA 72 bp | CAGCCTTCTTTTGGGAGAGTGCTTCTTGGGTTTATCTaGATGAGCTGTATCCTGGCTCCGAGGCGGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QPSFGRVLLGFI*MSCILAPRRFH Trigger: GTGGAACCGCCTCGGAGCCAGGATACAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 72 bp | GGGCATGCTGCAGCCTTCTTTTGGGAGAGTGCTTCTTaGGTTTATCTGGATGAGCTGTATCCTGGCTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHAAAFFWESAS*VYLDELYPGSE Trigger: CTCGGAGCCAGGATACAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAGGCTGCAGCATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | GATTCTGGGTCTTTCACGGTACAATGGCTCCTAAGCTaGTCCAGCAACATGCCAATTGGGTCCTCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DSGSFTVQWLLS*SSNMPIGSSSW Trigger: CCAGGAGGAGGACCCAATTGGCATGTTGCTGGACCAGCTTAGGAGCCATTGTACCGTGAAAGACCCAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CAA 72 bp | TGCGACGAGGACAGGATGTACAGGGGCATGTCACTGTaGAGGGCTTTTAAAGCCGACTCCTTGGGTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CDEDRMYRGMSL*RAFKADSLGPL Trigger: AAGTGGACCCAAGGAGTCGGCTTTAAAAGCCCTCAACAGTGACATGCCCCTGTACATCCTGTCCTCGTCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | GGCACCAACAACGATTCTGGGTCTTTCACGGTACAATaGCTCCTAAGCTGGTCCAGCAACATGCCAATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTNNDSGSFTVQ*LLSWSSNMPIG Trigger: CCCAATTGGCATGTTGCTGGACCAGCTTAGGAGCCATTGTACCGTGAAAGACCCAGAATCGTTGTTGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 90 bp | GCTTCACCGCTCTGGAGGGCCCGACAAGCACGCAGAAGCTGTGAGTaGTCACAGATGGAAGTGAGAATAAGATACAGAACTTTGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASPLWRARQARRSCE*SQMEVRIRYRTLLS Trigger: GGAAAGCAAAGTTCTGTATCTTATTCTCACTTCCATCTGTGACAACTCACAGCTTCTGCGTGCTTGTCGGGCCCTCCAGAGCGGTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS TCA 72 bp | CTTCTTTTGGGAGAGTGCTTCTTGGGTTTATCTGGATaGGCTGTATCCTGGCTCCGAGGCGGTTCCACCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LLLGECFLGLSG*AVSWLRGGSTL Trigger: TAAGGTGGAACCGCCTCGGAGCCAGGATACAGCTCATCCAGATAAACCCAAGAAGCACTCTCCCAAAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | TCCTCCTGGCTTCCGGGGACTATGTACACAAAAGCTTaGTTGGCAGGTACCGTAAAGAGGCAGTTGATACTC | + |
|
Preference number: 6 (lower is better) Translates to: SSWLPGTMYTKA*LAGTVKRQLIL Trigger: GAGTATCAACTGCCTCTTTACGGTACCTGCCAACCAAGCTTTTGTGTACATAGTCCCCGGAAGCCAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 72 bp | CTCCTCCTGGCTTCCGGGGACTATGTACACAAAAGCTaGGTTGGCAGGTACCGTAAAGAGGCAGTTGATACT | + |
|
Preference number: 6 (lower is better) Translates to: LLLASGDYVHKS*VGRYRKEAVDT Trigger: AGTATCAACTGCCTCTTTACGGTACCTGCCAACCAAGCTTTTGTGTACATAGTCCCCGGAAGCCAGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 72 bp | TTCTGGGTAAAATACTGGACATGGTGGTGGGCCTGGTaGAACCTAGGCTATCTGTTGACTGGCCCAAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FWVKYWTWWWAW*NLGYLLTGPSS Trigger: TGAGCTTGGGCCAGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS CAA 90 bp | AAGAGGAGTCTAGGTGGGCAAGGTCGGCAGTTTAACTTCCAGTCTTaGCCAACTGGGCAATCCTTAATGGCTGTTTTGAGGAGGGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: KRSLGGQGRQFNFQS*PTGQSLMAVLRRGS Trigger: ACTACCCCTCCTCAAAACAGCCATTAAGGATTGCCCAGTTGGCAAAGACTGGAAGTTAAACTGCCGACCTTGCCCACCTAGACTCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 90 bp | TTTAAAGCCGACTCCTTGGGTCCACTTCCCATCACTTTCATTACTTaGTCAGGCCCTGAGCACATGAACCTCCGACCTCGAGAGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FKADSLGPLPITFIT*SGPEHMNLRPRESS Trigger: TGAAGACTCTCGAGGTCGGAGGTTCATGTGCTCAGGGCCTGACAAAGTAATGAAAGTGATGGGAAGTGGACCCAAGGAGTCGGCTTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 90 bp | TATCTGCAAAGGAGCATCAGGAACCACAACAAAAAGCCTCATAAGTaGAGCATAATGTGGCTTCAGCCCTCTGCCCTGCGACGAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: YLQRSIRNHNKKPHK*SIMWLQPSALRRGQ Trigger: CTGTCCTCGTCGCAGGGCAGAGGGCTGAAGCCACATTATGCTCAACTTATGAGGCTTTTTGTTGTGGTTCCTGATGCTCCTTTGCAGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS TCA 72 bp | CTTTGCTTTCCTGATTGTAATAGGCCTGCAAAAGACTaGAGTCCTGGGGACCTGGCTCAGCTCGGTTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LCFPDCNRPAKD*SPGDLAQLGYL Trigger: AAGGTAACCGAGCTGAGCCAGGTCCCCAGGACTTCAGTCTTTTGCAGGCCTATTACAATCAGGAAAGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS GCA 72 bp | CTCTTCCTTCCCATCGATAGCCACTTCATACAACTTTaGTGCTGCAGAGATCCACTTCTGGTAAGTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LFLPIDSHFIQL*CCRDPLLVSGQ Trigger: CTGCCCACTTACCAGAAGTGGATCTCTGCAGCAGCAAAGTTGTATGAAGTGGCTATCGATGGGAAGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS GCA 72 bp | TGGGTAGGAGACCTTTGGGGCAATTTGAATGTAGCATaGCTGGGAGATATTCAACTGTGGATGCCTGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: WVGDLWGNLNVA*LGDIQLWMPDG Trigger: ACCGTCAGGCATCCACAGTTGAATATCTCCCAGGCATGCTACATTCAAATTGCCCCAAAGGTCTCCTACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 72 bp | TCCGACAGAGACAGCTTTGGTCTTGATTCCAGTTCCTaGATCTCCAGGATCCTGATGGTGAAAGAGTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SDRDSFGLDSSS*ISRILMVKEWE Trigger: TTCCCACTCTTTCACCATCAGGATCCTGGAGATCCAGGAACTGGAATCAAGACCAAAGCTGTCTCTGTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CCA 72 bp | TGCCACAGGAATTCTCGAAGAGTGAAATCCACTAGCTaGCCTGAAGAACTCGAGGTGCTGCTATCAATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CHRNSRRVKSTS*PEELEVLLSMW Trigger: CCACATTGATAGCAGCACCTCGAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGAGAATTCCTGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | TTTTTCTGGGTAAAATACTGGACATGGTGGTGGGCCTaGTTGAACCTAGGCTATCTGTTGACTGGCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: FFWVKYWTWWWA*LNLGYLLTGPS Trigger: GCTTGGGCCAGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS CAA 72 bp | CTAGGTGGGCAAGGTCGGCAGTTTAACTTCCAGTCTTaGCCAACTGGGCAATCCTTAATGGCTGTTTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGGQGRQFNFQS*PTGQSLMAVLR Trigger: CCTCAAAACAGCCATTAAGGATTGCCCAGTTGGCAAAGACTGGAAGTTAAACTGCCGACCTTGCCCACCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CAA 90 bp | AATTGGGTCCTCCTCCTGGCTTCCGGGGACTATGTACACAAAAGCTaGGTTGGCAGGTACCGTAAAGAGGCAGTTGATACTCTGATTAGT | + |
|
Preference number: 6 (lower is better) Translates to: NWVLLLASGDYVHKS*VGRYRKEAVDTLIS Trigger: ACTAATCAGAGTATCAACTGCCTCTTTACGGTACCTGCCAACCAAGCTTTTGTGTACATAGTCCCCGGAAGCCAGGAGGAGGACCCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS GCA 72 bp | TTCCTTCCCATCGATAGCCACTTCATACAACTTTGCTaGTGCAGAGATCCACTTCTGGTAAGTGGGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLPIDSHFIQLC*CRDPLLVSGQF Trigger: GAACTGCCCACTTACCAGAAGTGGATCTCTGCAGCAGCAAAGTTGTATGAAGTGGCTATCGATGGGAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CAA 72 bp | CAGTCTTTGCCAACTGGGCAATCCTTAATGGCTGTTTaGAGGAGGGGTAGTACTTTCTGTCTCAGTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: QSLPTGQSLMAV*RRGSTFCLSPS Trigger: GGATGGACTGAGACAGAAAGTACTACCCCTCCTCAAAACAGCCATTAAGGATTGCCCAGTTGGCAAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 90 bp | AGGAAATCTCAAGACCCAAAGGCCATCAGGTGGGAGAGTGATTTCTaGTTTTTCTGGGTAAAATACTGGACATGGTGGTGGGCCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKSQDPKAIRWESDF*FFWVKYWTWWWAWL Trigger: CAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTCCCACCTGATGGCCTTTGGGTCTTGAGATTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | TATGCGGCAAGTTTGACTGGTAGGCACTATGAGCCATaGGTAAAGCTTTTTGGCACCGGTTTTCCGAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: YAASLTGRHYEP*VKLFGTGFPRI Trigger: AATTCTCGGAAAACCGGTGCCAAAAAGCTTTACCCATGGCTCATAGTGCCTACCAGTCAAACTTGCCGCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
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| CDS CCA 72 bp | GAAGAGCCTGAGCAAGCTGATTCTTATGGACTGTCATaGTGTAATTATGCGGCAAGTTTGACTGGTAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: EEPEQADSYGLS*CNYAASLTGRH Trigger: GTGCCTACCAGTCAAACTTGCCGCATAATTACACCATGACAGTCCATAAGAATCAGCTTGCTCAGGCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS CCA 72 bp | TTCTTGTTTTTCTGGGTAAAATACTGGACATGGTGGTaGGCCTGGTTGAACCTAGGCTATCTGTTGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLFFWVKYWTWW*AWLNLGYLLTG Trigger: GCCAGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS CAA 72 bp | ACCAAAGACCAGCTGGAGAATTTGGGTAGGAGACCTTaGGGGCAATTTGAATGTAGCATGCCTGGGAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: TKDQLENLGRRP*GQFECSMPGRY Trigger: ATATCTCCCAGGCATGCTACATTCAAATTGCCCCAAAGGTCTCCTACCCAAATTCTCCAGCTGGTCTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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| CDS CAA 72 bp | GGCATGTCACTGTTGAGGGCTTTTAAAGCCGACTCCTaGGGTCCACTTCCCATCACTTTCATTACTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GMSLLRAFKADS*GPLPITFITLS Trigger: TGACAAAGTAATGAAAGTGATGGGAAGTGGACCCAAGGAGTCGGCTTTAAAAGCCCTCAACAGTGACATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CAA 90 bp | CAAGCTGATTCTTATGGACTGTCATGGTGTAATTATGCGGCAAGTTaGACTGGTAGGCACTATGAGCCATGGGTAAAGCTTTTTGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: QADSYGLSWCNYAAS*TGRHYEPWVKLFGT Trigger: GGTGCCAAAAAGCTTTACCCATGGCTCATAGTGCCTACCAGTCAAACTTGCCGCATAATTACACCATGACAGTCCATAAGAATCAGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS CCA 72 bp | AATTTGAATGTAGCATGCCTGGGAGATATTCAACTGTaGATGCCTGACGGTCAACCAAGTTTGGTCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NLNVACLGDIQL*MPDGQPSLVSS Trigger: AGAAGAGACCAAACTTGGTTGACCGTCAGGCATCCACAGTTGAATATCTCCCAGGCATGCTACATTCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | GATGACAATGTCCCAAGGCATAAGATAGTTTGTTCCTaGAACGAAGCCCTGTTGGTCCAAACCTGTATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: DDNVPRHKIVCS*NEALLVQTCMK Trigger: TTTCATACAGGTTTGGACCAACAGGGCTTCGTTCCAGGAACAAACTATCTTATGCCTTGGGACATTGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | TTCTTGTTTTTCTGGGTAAAATACTGGACATGGTGGTaGGCCTGGTTGAACCTGAGGCATCAGTATTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLFFWVKYWTWW*AWLNLRHQYYL Trigger: CAGATAATACTGATGCCTCAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | AGTGATTTCTTGTTTTTCTGGGTAAAATACTGGACATaGTGGTGGGCCTGGTTGAACCTGAGGCATCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SDFLFFWVKYWT*WWAWLNLRHQY Trigger: ATACTGATGCCTCAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | GATTTCTTGTTTTTCTGGGTAAAATACTGGACATGGTaGTGGGCCTGGTTGAACCTAGGCTATCTGTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: DFLFFWVKYWTW*WAWLNLGYLLT Trigger: AGTCAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS CCA 72 bp | AGTGATTTCTTGTTTTTCTGGGTAAAATACTGGACATaGTGGTGGGCCTGGTTGAACCTAGGCTATCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SDFLFFWVKYWT*WWAWLNLGYLL Trigger: CAACAGATAGCCTAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143280.2 |
||
| CDS CAA 72 bp | TCTTATGGACTGTCATGGTGTAATTATGCGGCAAGTTaGACTGGTAGGCACTATGAGCCATGGGTAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SYGLSWCNYAAS*TGRHYEPWVKL Trigger: AAGCTTTACCCATGGCTCATAGTGCCTACCAGTCAAACTTGCCGCATAATTACACCATGACAGTCCATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020801.14 ENSMUST00000143280.2 |
||
| CDS CAA 72 bp | AGGCATAAGATAGTTTGTTCCTGGAACGAAGCCCTGTaGGTCCAAACCTGTATGAAAGTTGTAAGACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RHKIVCSWNEAL*VQTCMKVVRLG Trigger: GCCAAGTCTTACAACTTTCATACAGGTTTGGACCAACAGGGCTTCGTTCCAGGAACAAACTATCTTATGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS TCA 72 bp | GAAATCTCAAGACCCAAAGGCCATCAGGTGGGAGAGTaGTTTCTTGTTTTTCTGGGTAAAATACTGGACATG | + |
|
Preference number: 6 (lower is better) Translates to: EISRPKGHQVGE*FLVFLGKILDM Trigger: CATGTCCAGTATTTTACCCAGAAAAACAAGAAATCACTCTCCCACCTGATGGCCTTTGGGTCTTGAGATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
||
| CDS CCA 72 bp | GATTTCTTGTTTTTCTGGGTAAAATACTGGACATGGTaGTGGGCCTGGTTGAACCTGAGGCATCAGTATTAT | + |
|
Preference number: 6 (lower is better) Translates to: DFLFFWVKYWTW*WAWLNLRHQYY Trigger: ATAATACTGATGCCTCAGGTTCAACCAGGCCCACCACCATGTCCAGTATTTTACCCAGAAAAACAAGAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020801.14 |
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