Pregenerated sensors for SMG6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038290Ensembl transcript IDs: ENSMUST00000045281.13, ENSMUST00000130145.8, ENSMUST00000140197.3
Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAGGAGGGTCCCAGCAGTTTCCGCCTGACCCTTGGGAGGGCTCTGTaGGGAGCGGCTCCCCCACAGCACGGCCACGGCGTGAGGTTGGAA | + |
Preference number: 1 (lower is better) Translates to: QEGPSSFRLTLGRAL*GAAPPQHGHGVRLE Trigger: TTCCAACCTCACGCCGTGGCCGTGCTGTGGGGGAGCCGCTCCTCACAGAGCCCTCCCAAGGGTCAGGCGGAAACTGCTGGGACCCTCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 90 bp | GGGTGGATTGGTAGCTCAGGCACGTGGACATCTTCCGTGTTACACTaGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCC | + |
Preference number: 1 (lower is better) Translates to: GWIGSSGTWTSSVLH*APGGLSGMAPWGWA Trigger: GGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTGAGCTACCAATCCACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 90 bp | GGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTaGAGGGCCACTCAGGACGCACGGGCCCAAGACCAGATGGCCCTT | + |
Preference number: 1 (lower is better) Translates to: GYCSERKAKDGSMCW*RATQDARAQDQMAL Trigger: AAGGGCCATCTGGTCTTGGGCCCGTGCGTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 90 bp | AGAGGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTaGTGGAGGGCCACTCAGGACGCACGGGCCCAAGACCAGATGGCC | + |
Preference number: 1 (lower is better) Translates to: RGYCSERKAKDGSMC*WRATQDARAQDQMA Trigger: GGCCATCTGGTCTTGGGCCCGTGCGTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR TCA 90 bp | GTCCTGGGCACTGTCCTGGGCCTGAGAAGGGCAGAGCACCCTTGGTaGAGCACTGCTCCTCCTGAGGTGGGTTGTGTGATCCCCTGCTTA | + |
Preference number: 1 (lower is better) Translates to: VLGTVLGLRRAEHPW*STAPPEVGCVIPCL Trigger: TAAGCAGGGGATCACACAACCCACCTCAGGAGGAGCAGTGCTTCACCAAGGGTGCTCTGCCCTTCTCAGGCCCAGGACAGTGCCCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 90 bp | GCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTaGGCACCCTTCCTGACAGCTGAAGCCTCTCAGACATTCAGGACA | + |
Preference number: 1 (lower is better) Translates to: AWVHRASGPQGDGDT*APFLTAEASQTFRT Trigger: TGTCCTGAATGTCTGAGAGGCTTCAGCTGTCAGGAAGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 90 bp | CTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCATCTaGGCCTCAGGGAGATGGAGACACCTGGGCACCCTTCCTGACAGC | + |
Preference number: 1 (lower is better) Translates to: LLLLQTEVSVGPQGI*ASGRWRHLGTLPDS Trigger: GCTGTCAGGAAGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR TCA 90 bp | CACTGGGGAGCAGCTCCTTCAGGTCCGGGACGAAGGAAGATACCTTaGTGTCATCTTGGTCCTCTTGGTCCTCAGGAGAGGACAGCTGAG | + |
Preference number: 1 (lower is better) Translates to: HWGAAPSGPGRRKIP*CHLGPLGPQERTAE Trigger: CTCAGCTGTCCTCTCCTGAGGACCAAGAGGACCAAGATGACATCAAGGTATCTTCCTTCGTCCCGGACCTGAAGGAGCTGCTCCCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | GAAGAGGATGGTTTATTGTCTGGGTGGATTGGTAGCTCAGGCACGTaGACATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGA | + |
Preference number: 1 (lower is better) Translates to: EEDGLLSGWIGSSGT*TSSVLHWAPGGLSG Trigger: TCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTGAGCTACCAATCCACCCAGACAATAAACCATCCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 90 bp | CAGCCGAGCCAGACTGGCCAGGTGGTCAATGAAGCCGTTGGTATCTaGTACGAGGAACAAGGGTCTGATCTCCAGCTCCATCTGCCTCAT | + |
Preference number: 1 (lower is better) Translates to: QPSQTGQVVNEAVGI*YEEQGSDLQLHLPH Trigger: ATGAGGCAGATGGAGCTGGAGATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCTCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | CACGGCCACGGCGTGAGGTTGGAAGAGGATGGTTTATTGTCTGGGTaGATTGGTAGCTCAGGCACGTGGACATCTTCCGTGTTACACTGG | + |
Preference number: 1 (lower is better) Translates to: HGHGVRLEEDGLLSG*IGSSGTWTSSVLHW Trigger: CCAGTGTAACACGGAAGATGTCCACGTGCCTGAGCTACCAATCCACCCAGACAATAAACCATCCTCTTCCAACCTCACGCCGTGGCCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR TCA 90 bp | GGTACGAGGAACAAGGGTCTGATCTCCAGCTCCATCTGCCTCATCTaGCTCTGGTCTTCCAAAACAGCCTGGATCTTTTCCTGGCGACGC | + |
Preference number: 1 (lower is better) Translates to: GTRNKGLISSSICLI*LWSSKTAWIFSWRR Trigger: GCGTCGCCAGGAAAAGATCCAGGCTGTTTTGGAAGACCAGAGTCAGATGAGGCAGATGGAGCTGGAGATCAGACCCTTGTTCCTCGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | CTGCAAGGGCAGATCCAAAGATGTGGGTGGAGGATTCCAGGTGTCTaGGTAGCCAAGCATCCAATCAGACCAGACTTTCACACTGGGGAG | + |
Preference number: 1 (lower is better) Translates to: LQGQIQRCGWRIPGV*VAKHPIRPDFHTGE Trigger: CTCCCCAGTGTGAAAGTCTGGTCTGATTGGATGCTTGGCTACCCAGACACCTGGAATCCTCCACCCACATCTTTGGATCTGCCCTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | CCAGACATCCACAGCAACCTGCAAGGGCAGATCCAAAGATGTGGGTaGAGGATTCCAGGTGTCTGGGTAGCCAAGCATCCAATCAGACCA | + |
Preference number: 1 (lower is better) Translates to: PDIHSNLQGQIQRCG*RIPGVWVAKHPIRP Trigger: TGGTCTGATTGGATGCTTGGCTACCCAGACACCTGGAATCCTCCACCCACATCTTTGGATCTGCCCTTGCAGGTTGCTGTGGATGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR TCA 90 bp | TACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGGTGTaGCGGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTTGGTT | + |
Preference number: 1 (lower is better) Translates to: YLGVQLSQLGDFSEV*RVGKEGQLGRLYLV Trigger: AACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR TCA 90 bp | AGGCTAAAGGGCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATaGCAAAGCCAGAAACGGGCTCAACACCCTGGCACCTCTACCTTG | + |
Preference number: 1 (lower is better) Translates to: RLKGPMSPLLGKEVQ*QSQKRAQHPGTSTL Trigger: CAAGGTAGAGGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGCCCTTTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR TCA 90 bp | CCATGGTGTCTGGGACGGGTGCCACTGACACATATTTTCCACCCTTaGATGCCAGCAGAGGCTCTTCTTGTCCACAAAGGGCTTCCAGAA | + |
Preference number: 1 (lower is better) Translates to: PWCLGRVPLTHIFHP*MPAEALLVHKGLPE Trigger: TTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCAGACACCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | TTGACCAGACATCCACAGCAACCTGCAAGGGCAGATCCAAAGATGTaGGTGGAGGATTCCAGGTGTCTGGGTAGCCAAGCATCCAATCAG | + |
Preference number: 1 (lower is better) Translates to: LTRHPQQPARADPKM*VEDSRCLGSQASNQ Trigger: CTGATTGGATGCTTGGCTACCCAGACACCTGGAATCCTCCACCCACATCTTTGGATCTGCCCTTGCAGGTTGCTGTGGATGTCTGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | GAGAAGCCGATCCTCTTCCAGGATAAGCAGGGTGAGGTCATCATCTaGGTCCTTGTACAGTGGCACCTCAGACTGATTGACTGCAGTCAG | + |
Preference number: 1 (lower is better) Translates to: EKPILFQDKQGEVII*VLVQWHLRLIDCSQ Trigger: CTGACTGCAGTCAATCAGTCTGAGGTGCCACTGTACAAGGACCCAGATGATGACCTCACCCTGCTTATCCTGGAAGAGGATCGGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR TCA 90 bp | TTGGCTTCCCATTTCCTTTCCCATGGTGTCTGGGACGGGTGCCACTaGCACATATTTTCCACCCTTGAATGCCAGCAGAGGCTCTTCTTG | + |
Preference number: 1 (lower is better) Translates to: LASHFLSHGVWDGCH*HIFSTLECQQRLFL Trigger: CAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | AGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTTaGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGT | + |
Preference number: 1 (lower is better) Translates to: RCDGLGRKDSWEGFI*FLSQVVGVRFRTRS Trigger: ACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCGTCACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR TCA 90 bp | GCCCAAGGATGCAGCTTGTTCCTGGATCACAGAACGACACTCCTCTaGGAAGCAGTCTTTCAACTGGGAGTTATGCACGGCAAACATGTT | + |
Preference number: 1 (lower is better) Translates to: AQGCSLFLDHRTTLL*EAVFQLGVMHGKHV Trigger: AACATGTTTGCCGTGCATAACTCCCAGTTGAAAGACTGCTTCTCAGAGGAGTGTCGTTCTGTGATCCAGGAACAAGCTGCATCCTTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR GCA 90 bp | TTCAACTGGGAGTTATGCACGGCAAACATGTTGATGGTCATAAGCTaGAGCATACGGGTACTTCCAATAGGAGATGGGCTATGCTGCAGC | + |
Preference number: 1 (lower is better) Translates to: FNWELCTANMLMVIS*SIRVLPIGDGLCCS Trigger: GCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTATGCTGCAGCTTATGACCATCAACATGTTTGCCGTGCATAACTCCCAGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 90 bp | ACCAGTAGAGAAAACATAGCCAAGCCCAAGGATGCAGCTTGTTCCTaGATCACAGAACGACACTCCTCTGAGAAGCAGTCTTTCAACTGG | + |
Preference number: 1 (lower is better) Translates to: TSRENIAKPKDAACS*ITERHSSEKQSFNW Trigger: CCAGTTGAAAGACTGCTTCTCAGAGGAGTGTCGTTCTGTGATCCAGGAACAAGCTGCATCCTTGGGCTTGGCTATGTTTTCTCTACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR TCA 90 bp | AGGGTGAGGTCATCATCTGGGTCCTTGTACAGTGGCACCTCAGACTaGTTGACTGCAGTCAGTATGTTACAGAAATCAGCTAGTGTTGAC | + |
Preference number: 1 (lower is better) Translates to: RVRSSSGSLYSGTSD*LTAVSMLQKSASVD Trigger: GTCAACACTAGCTGATTTCTGTAACATACTGACTGCAGTCAATCAGTCTGAGGTGCCACTGTACAAGGACCCAGATGATGACCTCACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR TCA 90 bp | AAGCCTCTCAGACATTCAGGACAGAGACTGTGCAGACTGAGGGGTTaGTCAGTTTCCTTGCATCTAATGGAAACTTTAGAATCTCTGCCC | + |
Preference number: 1 (lower is better) Translates to: KPLRHSGQRLCRLRG*SVSLHLMETLESLP Trigger: GGGCAGAGATTCTAAAGTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGTCCTGAATGTCTGAGAGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTGGAGATGGAGACACCTaGGCACCCTTCCTGACAGCT | + |
Preference number: 2 (lower is better) Translates to: RGSTGHLGLREMETPGHPGDGDT*APFLTA Trigger: AGCTGTCAGGAAGGGTGCCCAGGTGTCTCCATCTCC...AGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | CGCACGGGCCCAAGACCAGATGGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGAGCACGGCCACGGCGTaGGGTTGGAAGAGGATGGTT | + |
Preference number: 2 (lower is better) Translates to: RTGPRPDGPSLRPMTAQKSTATA*GWKRMV Trigger: AACCATCCTCTTCCAACCTCACGCCGTGGCCGTGCT...CTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCCATCTGGTCTTGGGCCCGTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | CCAGCTAGGAGACTTCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGCCAACCCCCAGCCAATaGCCCTCACAGCCAGAGGAG | + |
Preference number: 2 (lower is better) Translates to: PARRLLRGVTGWEGRTAGPTPSQ*PSQPEE Trigger: CTCCTCTGGCTGTGAGGGTCATTGGCTGGGGGTTGG...CCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACGGTAGCTCAGGCACGTaGACATCTTCCGTGTTACAC | + |
Preference number: 2 (lower is better) Translates to: QRGSTGHLGLREMETPGHGSSGT*TSSVLH Trigger: GTGTAACACGGAAGATGTCCACGTGCCTGAGCTACC...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | GACGGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTTGGTTCCTGTCACAGCTTGGGAGGGCTCTGTaGGGAGCGGCTCCCCCACAG | + |
Preference number: 2 (lower is better) Translates to: DGLGRKDSWEGFIWFLSQLGRAL*GAAPPQ Trigger: CTGTGGGGGAGCCGCTCCTCACAGAGCCCTCCCAAG...CTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | CGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTAGAGACTGTGCAGACTaGGGGGTTGATCAGTTTCCT | + |
Preference number: 2 (lower is better) Translates to: RGSTGHLGLREMETPGHPRDCAD*GVDQFP Trigger: AGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCT...AGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | TTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGCATCCTCACCCCCACTaGCTTCAGCCTCTGAATCTT | + |
Preference number: 2 (lower is better) Translates to: FRVTLGAWRPLRNGSMGVHPHPH*LQPLNL Trigger: AAGATTCAGAGGCTGAAGGCAGTGGGGGTGAGGATG...CACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACAGGGTGGGAGCTTGGTaGCCTACTCGGCTTGTCCAC | + |
Preference number: 2 (lower is better) Translates to: SERKAKDGSMCWWRATQDRVGAW*PTRLVH Trigger: GTGGACAAGCCGAGTAGGCCACCAAGCTCCCACCCT...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CCAGCTAGGAGACTTCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGGGTCCACAGGGCATCTaGGCCTCAGGGAGATGGAGA | + |
Preference number: 2 (lower is better) Translates to: PARRLLRGVTGWEGRTAGGPQGI*ASGRWR Trigger: TCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACC...CCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CAA 90 bp | CCCCCACAGCACGGCCACGGCGTGAGGTTGGAAGAGGATGGTTTATaGTCTGGGTGGATTGGTAGCTCAGGCACGTGGACATCTTCCGTG | + |
Preference number: 2 (lower is better) Translates to: PPQHGHGVRLEEDGL*SGWIGSSGTWTSSV Trigger: CACGGAAGATGTCCACGTGCCTGAGCTACCAATCCACCCAGACAATAAACCATCCTCTTCCAACCTCACGCCGTGGCCGTGCTGTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CAA 90 bp | CTCCCTCCAGCCCTGGGACCAGATAGAGGGAAAAAGGGTGGGAGCTaGGTGGCCTACTCGGCTTGTCCACCTGTTGTCACTGTAGCCAGT | + |
Preference number: 2 (lower is better) Translates to: LPPALGPDRGKKGGS*VAYSACPPVVTVAS Trigger: ACTGGCTACAGTGACAACAGGTGGACAAGCCGAGTAGGCCACCAAGCTCCCACCCTTTTTCCCTCTATCTGGTCCCAGGGCTGGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | GTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCTTGGGAGGGCTCTGTaGGGAGCGGCTCCCCCACAG | + |
Preference number: 2 (lower is better) Translates to: VGQKEERYSSIPNPPTPSLGRAL*GAAPPQ Trigger: CTGTGGGGGAGCCGCTCCTCACAGAGCCCTCCCAAG...GCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | CGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTAATACTTCAGCACTGTaGCCCTTTTGCAGTCAGCTG | + |
Preference number: 2 (lower is better) Translates to: RGSTGHLGLREMETPGHPNTSAL*PFCSQL Trigger: CAGCTGACTGCAAAAGGGTCACAGTGCTGAAGTATT...AGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | ACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCCTTACCACTACAGAGTaGCTGGGTCCTCGGGGTGAG | + |
Preference number: 2 (lower is better) Translates to: TAVKGRPRMGACAGGGPLLTTTE*LGPRGE Trigger: CTCACCCCGAGGACCCAGCCACTCTGTAGTGGTAAG...GAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CAA 90 bp | TGGCGACGCTGCTGCTCAGCTATCTTCCTTGCTAGAGCCAGCTTCTaGGCCCGAAGTTCCCTGATGTCATCCTCACCCCCACTGCCTTCA | + |
Preference number: 2 (lower is better) Translates to: WRRCCSAIFLARASF*ARSSLMSSSPPLPS Trigger: TGAAGGCAGTGGGGGTGAGGATGACATCAGGGAACTTCGGGCCAAGAAGCTGGCTCTAGCAAGGAAGATAGCTGAGCAGCAGCGTCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 90 bp | CTCTCCAGCAGCCGAGCCAGACTGGCCAGGTGGTCAATGAAGCCGTaGGTATCTGGTACGAGGAACAAGGGTCTGATCTCCAGCTCCATC | + |
Preference number: 2 (lower is better) Translates to: LSSSRARLARWSMKP*VSGTRNKGLISSSI Trigger: GATGGAGCTGGAGATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCTCGGCTGCTGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | ACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCACCCTTCCTGACAGCTaGAGCCTCTCAGACATTCAG | + |
Preference number: 2 (lower is better) Translates to: TAVKGRPRMGACAGGGPLTLPDS*SLSDIQ Trigger: CTGAATGTCTGAGAGGCTTCAGCTGTCAGGAAGGGT...GAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACGGCGAGGGCTGCTGTTaGTGTTACAGACAGAAGTCA | + |
Preference number: 2 (lower is better) Translates to: SERKAKDGSMCWWRATQDGEGCC*CYRQKS Trigger: TGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCC...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | ACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCTCCCCAAGAGGGTACTaGAGTGAAAGGAAGGCCAAG | + |
Preference number: 2 (lower is better) Translates to: TAVKGRPRMGACAGGGPLSPRGY*SERKAK Trigger: CTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGA...GAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | TGGTCAAGGCCCGCAGGCAGGAGTCCCGACTCTCAAATCTCCGTTCGAGGAACTAGCCAAGCCCAAGGATaGAGCTTGTTCCTGGATCAC | + |
Preference number: 2 (lower is better) Translates to: WSRPAGRSPDSQISVRGTSQAQG*SLFLDH Trigger: GTGATCCAGGAACAAGCTGCATCCTTGGGCTTGGCT...AGTTCCTCGAACGGAGATTTGAGAGTCGGGACTCCTGCCTGCGGGCCTTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGGTTACACTGGGCGCCTaGCGGCCTCTCAGGAATGGC | + |
Preference number: 2 (lower is better) Translates to: APCPLFWVKKYNDKARNGVTLGA*RPLRNG Trigger: GCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAAC...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTGCAAAGTGCAAGATGTaGACAGGAAGAGAAACATGT | + |
Preference number: 2 (lower is better) Translates to: RGSTGHLGLREMETPGHPAKCKM*TGRETC Trigger: ACATGTTTCTCTTCCTGTCCACATCTTGCACTTTGC...AGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCTCCCCTCAGCCCACCTaGGCCCACGTAAGGAAGGCT | + |
Preference number: 2 (lower is better) Translates to: VGQKEERYSSIPNPPTPSSPQPT*AHVRKA Trigger: AGCCTTCCTTACGTGGGCCCAGGTGGGCTGAGGGGA...GCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 90 bp | TGTCCAGTAATGTCCTCACTTCGGAAGGCGATAGATTCAAGTTCATaGCCACGGCTGGTCAAGGCCCGCAGGCAGGAGTCCCGACTCTCA | + |
Preference number: 2 (lower is better) Translates to: CPVMSSLRKAIDSSS*PRLVKARRQESRLS Trigger: TGAGAGTCGGGACTCCTGCCTGCGGGCCTTGACCAGCCGTGGCAATGAACTTGAATCTATCGCCTTCCGAAGTGAGGACATTACTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | TTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGAAAACAAGGGCAAAGTaGAAGATGTGGACAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: FRVTLGAWRPLRNGSMGVKTRAK*KMWTGR Trigger: TCTTCCTGTCCACATCTTGCACTTTGCCCTTGTTTT...CACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CTTGTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCTCAGGAATGGCTCCATaGGGGTGGGCCCCAGTGTGG | + |
Preference number: 2 (lower is better) Translates to: LVFAVVQAAREDQVIVVTSGMAP*GWAPVW Trigger: CCACACTGGGGCCCACCCCCATGGAGCCATTCCTGA...GGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACTGCTGTCTCCTGCCCTTTaGCGAGGCCGTCCAGCTCAT | + |
Preference number: 2 (lower is better) Translates to: PVTGGRGKIQNEKSHKELLSPAL*RGRPAH Trigger: ATGAGCTGGACGGCCTCGCCAAAGGGCAGGAGACAG...CAGTTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGCAGCAAAGAAGAGTCTaGGGAAATTTCCCCAAGAGG | + |
Preference number: 2 (lower is better) Translates to: PWHLYLGVQLSQLGDFSEQQRRV*GNFPKR Trigger: CCTCTTGGGGAAATTTCCTCAGACTCTTCTTTGCTG...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | CCTGGATCTTTTCCTGGCGACGCTGCTGCTCAGCTATCTTCCTTGCTAGAGCCATCCCCAAGAGGGTACTaGAGTGAAAGGAAGGCCAAG | + |
Preference number: 2 (lower is better) Translates to: PGSFPGDAAAQLSSLLEPSPRGY*SERKAK Trigger: CTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGA...TGGCTCTAGCAAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGTCAGGAATGGCTCCATaGGGGTGGGCCCCAGTGTGG | + |
Preference number: 2 (lower is better) Translates to: GRLYLVPVTGGRGKIQNESGMAP*GWAPVW Trigger: CCACACTGGGGCCCACCCCCATGGAGCCATTCCTGA...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGGTTACACTGGGCGCCTaGCGGCCTCTCAGGAATGGC | + |
Preference number: 2 (lower is better) Translates to: GRLYLVPVTGGRGKIQNEVTLGA*RPLRNG Trigger: GCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAAC...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | AGGAAATTTCCCCAAGAGGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCACTCCCTGCTAAATCTTaGCAGCCCAGGAGGGTCCCA | + |
Preference number: 2 (lower is better) Translates to: RKFPQEGTAVKGRPRMGALPAKS*QPRRVP Trigger: TGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAG...TGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGAAATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | AGGAAATTTCCCCAAGAGGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCACTTACCACTACAGAGTaGCTGGGTCCTCGGGGTGAG | + |
Preference number: 2 (lower is better) Translates to: RKFPQEGTAVKGRPRMGALTTTE*LGPRGE Trigger: CTCACCCCGAGGACCCAGCCACTCTGTAGTGGTAAG...TGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGAAATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAACCATTTCCTTTCCCATaGTGTCTGGGACGGGTGCCA | + |
Preference number: 2 (lower is better) Translates to: GPSLRPMTAQKENKGKVQPFPFP*CLGRVP Trigger: TGGCACCCGTCCCAGACACCATGGGAAAGGAAATGG...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAAGCCAGACTGGCCAGGTaGTCAATGAAGCCGTTGGTA | + |
Preference number: 2 (lower is better) Translates to: GPSLRPMTAQKENKGKVQARLAR*SMKPLV Trigger: TACCAACGGCTTCATTGACCACCTGGCCAGTCTGGC...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 90 bp | CAGCTCCTTCAGGTCCGGGACGAAGGAAGATACCTTGATGTCATCTaGGTCCTCTTGGTCCTCAGGAGAGGACAGCTGAGCTTTAGCAGA | + |
Preference number: 2 (lower is better) Translates to: QLLQVRDEGRYLDVI*VLLVLRRGQLSFSR Trigger: TCTGCTAAAGCTCAGCTGTCCTCTCCTGAGGACCAAGAGGACCAAGATGACATCAAGGTATCTTCCTTCGTCCCGGACCTGAAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | GCCAGGTGGTCAATGAAGCCGTTGGTATCTGGTACGAGGAACAAGGGTCTGATCTGGGACGGGTGCCACTaGCACATATTTTCCACCCTT | + |
Preference number: 2 (lower is better) Translates to: ARWSMKPLVSGTRNKGLIWDGCH*HIFSTL Trigger: AAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCA...GATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAAGGCGAGGGCTGCTGTTaGTGTTACAGACAGAAGTCA | + |
Preference number: 2 (lower is better) Translates to: GPSLRPMTAQKENKGKVQGEGCC*CYRQKS Trigger: TGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCC...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGTCCTGGCGACGCTGCTaGTCAGCTATCTTCCTTGCT | + |
Preference number: 2 (lower is better) Translates to: APCPLFWVKKYNDKARNGSWRRC*SAIFLA Trigger: AGCAAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGA...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GTAAAGAAGTACAATGACAAAGCCAGAAACGGGCTCAACACCCTGGCACCTCTAGATGGGAGCATGTGCTaGTGGAGGGCCACTCAGGAC | + |
Preference number: 2 (lower is better) Translates to: VKKYNDKARNGLNTLAPLDGSMC*WRATQD Trigger: GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATC...TAGAGGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GCCAGGTGGTCAATGAAGCCGTTGGTATCTGGTACGAGGAACAAGGGTCTGATCACCAGACTTTCACACTaGGGAGCAGCTCCTTCAGGT | + |
Preference number: 2 (lower is better) Translates to: ARWSMKPLVSGTRNKGLITRLSH*GAAPSG Trigger: ACCTGAAGGAGCTGCTCCCCAGTGTGAAAGTCTGGT...GATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CCTGGATCTTTTCCTGGCGACGCTGCTGCTCAGCTATCTTCCTTGCTAGAGCCAGCAGATCCAAAGATGTaGGTGGAGGATTCCAGGTGT | + |
Preference number: 2 (lower is better) Translates to: PGSFPGDAAAQLSSLLEPADPKM*VEDSRC Trigger: ACACCTGGAATCCTCCACCCACATCTTTGGATCTGC...TGGCTCTAGCAAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 90 bp | CAGGTCCGGGACGAAGGAAGATACCTTGATGTCATCTTGGTCCTCTaGGTCCTCAGGAGAGGACAGCTGAGCTTTAGCAGAGTCCTTAAG | + |
Preference number: 2 (lower is better) Translates to: QVRDEGRYLDVILVL*VLRRGQLSFSRVLK Trigger: CTTAAGGACTCTGCTAAAGCTCAGCTGTCCTCTCCTGAGGACCAAGAGGACCAAGATGACATCAAGGTATCTTCCTTCGTCCCGGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAAGAGAGCTTCTGAGCTaGGTCCTGGGCACTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: KWDRKKKGILPFPIPQPPRELLS*VLGTVL Trigger: CAGGACAGTGCCCAGGACTCAGCTCAGAAGCTCTCT...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | GTAAAGAAGTACAATGACAAAGCCAGAAACGGGCTCAACACCCTGGCACCTCTACGAGGAACAAGGGTCTaGTCTCCAGCTCCATCTGCC | + |
Preference number: 2 (lower is better) Translates to: VKKYNDKARNGLNTLAPLRGTRV*SPAPSA Trigger: GGCAGATGGAGCTGGAGATCAGACCCTTGTTCCTCG...TAGAGGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAAGGTTTATTGTCTGGGTaGATTGGTAGCTCAGGCACG | + |
Preference number: 2 (lower is better) Translates to: GPSLRPMTAQKENKGKVQGLLSG*IGSSGT Trigger: CGTGCCTGAGCTACCAATCCACCCAGACAATAAACC...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CAAGGCCCGCAGGCAGGAGTCCCGACTCTCAAATCTCCGTTCGAGGAACTCAATGAGGTTGGAAGAGGATaGTTTATTGTCTGGGTGGAT | + |
Preference number: 2 (lower is better) Translates to: QGPQAGVPTLKSPFEELNEVGRG*FIVWVD Trigger: ATCCACCCAGACAATAAACCATCCTCTTCCAACCTC...ATTGAGTTCCTCGAACGGAGATTTGAGAGTCGGGACTCCTGCCTGCGGGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | GACGGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTTGGTTCCTGTCACAGTGCAGACTGAGGGGTTaGTCAGTTTCCTTGCATCTA | + |
Preference number: 2 (lower is better) Translates to: DGLGRKDSWEGFIWFLSQCRLRG*SVSLHL Trigger: TAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCA...CTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | TGTGATCCCCTGCTTAGCCTGAGACAGCCTTCTCAATCCTCCTCTACCTCTTTGCTTCCCTTAGGCCCATaGCTGCCCAAAAGGAAAACA | + |
Preference number: 2 (lower is better) Translates to: CDPLLSLRQPSQSSSTSLLPLGP*LPKRKT Trigger: TGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAG...CAAAGAGGTAGAGGAGGATTGAGAAGGCTGTCTCAGGCTAAGCAGGGGATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GCCAGGTGGTCAATGAAGCCGTTGGTATCTGGTACGAGGAACAAGGGTCTGATCAGGCATGTGCAGCGCTaGACCAGTAGAGAAAACATA | + |
Preference number: 2 (lower is better) Translates to: ARWSMKPLVSGTRNKGLIRHVQR*TSRENI Trigger: TATGTTTTCTCTACTGGTCCAGCGCTGCACATGCCT...GATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACTGATCCAAAGATGTGGGTaGAGGATTCCAGGTGTCTGG | + |
Preference number: 2 (lower is better) Translates to: PVTGGRGKIQNEKSHKELIQRCG*RIPGVW Trigger: CCAGACACCTGGAATCCTCCACCCACATCTTTGGAT...CAGTTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | CCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACTGCATATTTTCCACCCTTaGATGCCAGCAGAGGCTCTT | + |
Preference number: 2 (lower is better) Translates to: PVTGGRGKIQNEKSHKELHIFHP*MPAEAL Trigger: AAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATG...CAGTTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCCAGGGAAGGAAGGACAGCTaGGAAGGCTTTATTTGGTTC | + |
Preference number: 2 (lower is better) Translates to: VFAVVQAAREDQVIVVTQGRKDS*EGFIWF Trigger: GAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCC...CTGGGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | CTTGTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCGAAGCCGTTGGTATCTaGTACGAGGAACAAGGGTCT | + |
Preference number: 2 (lower is better) Translates to: LVFAVVQAAREDQVIVVTEAVGI*YEEQGS Trigger: AGACCCTTGTTCCTCGTACCAGATACCAACGGCTTC...GGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | CTTGTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCTGCAGACTGAGGGGTTaGTCAGTTTCCTTGCATCTA | + |
Preference number: 2 (lower is better) Translates to: LVFAVVQAAREDQVIVVTCRLRG*SVSLHL Trigger: TAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCA...GGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR TCA 90 bp | GTAAAGAAGTACAATGACAAAGCCAGAAACGGGCTCAACACCCTGGCACCTCTATCAGGAGAGGACAGCTaGGCTTTAGCAGAGTCCTTA | + |
Preference number: 2 (lower is better) Translates to: VKKYNDKARNGLNTLAPLSGEDS*ALAESL Trigger: TAAGGACTCTGCTAAAGCTCAGCTGTCCTCTCCTGA...TAGAGGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | CAAAGATGTGGGTGGAGGATTCCAGGTGTCTGGGTAGCCAAGCATCCAATCAGATTGATGGTCATAAGCTaGAGCATACGGGTACTTCCA | + |
Preference number: 2 (lower is better) Translates to: QRCGWRIPGVWVAKHPIRLMVIS*SIRVLP Trigger: TGGAAGTACCCGTATGCTGCAGCTTATGACCATCAA...TCTGATTGGATGCTTGGCTACCCAGACACCTGGAATCCTCCACCCACATCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | GTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCCAGCCTTTTGCAGTCAGCTaGAATAACCTTATCCGAGGT | + |
Preference number: 2 (lower is better) Translates to: VFAVVQAAREDQVIVVTQPFAVS*NNLIRG Trigger: ACCTCGGATAAGGTTATTGCAGCTGACTGCAAAAGG...CTGGGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATGGTTTATTGTCTGGGTaGATTGGTAGCTCAGGCACG | + |
Preference number: 2 (lower is better) Translates to: DRKKKGILPFPIPQPPANGLLSG*IGSSGT Trigger: CGTGCCTGAGCTACCAATCCACCCAGACAATAAACC...ATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCATCTTCCAAAACAGCCTaGATCTTTTCCTGGCGACGC | + |
Preference number: 2 (lower is better) Translates to: KWDRKKKGILPFPIPQPPSSKTA*IFSWRR Trigger: GCGTCGCCAGGAAAAGATCCAGGCTGTTTTGGAAGA...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | GTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCCAGGCAAAGTGCAAGATGTaGACAGGAAGAGAAACATGT | + |
Preference number: 2 (lower is better) Translates to: VFAVVQAAREDQVIVVTQAKCKM*TGRETC Trigger: ACATGTTTCTCTTCCTGTCCACATCTTGCACTTTGC...CTGGGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGGAAGGAAGGACAGCTaGGAAGGCTTTATTTGGTTC | + |
Preference number: 2 (lower is better) Translates to: KWDRKKKGILPFPIPQPPGRKDS*EGFIWF Trigger: GAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCC...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCACCTTGATGTCATCTTaGTCCTCTTGGTCCTCAGGA | + |
Preference number: 2 (lower is better) Translates to: SNGNFRISAPYHYRVAGSTLMSS*SSWSSG Trigger: TCCTGAGGACCAAGAGGACCAAGATGACATCAAGGT...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 90 bp | TCTGAGAAGCAGTCTTTCAACTGGGAGTTATGCACGGCAAACATGTaGATGGTCATAAGCTGCAGCATACGGGTACTTCCAATAGGAGAT | + |
Preference number: 2 (lower is better) Translates to: SEKQSFNWELCTANM*MVISCSIRVLPIGD Trigger: ATCTCCTATTGGAAGTACCCGTATGCTGCAGCTTATGACCATCAACATGTTTGCCGTGCATAACTCCCAGTTGAAAGACTGCTTCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CCA 90 bp | ACAGAGACTGTGCAGACTGAGGGGTTGATCAGTTTCCTTGCATCTAATGGAAACGAGGTTGGAAGAGGATaGTTTATTGTCTGGGTGGAT | + |
Preference number: 2 (lower is better) Translates to: TETVQTEGLISFLASNGNEVGRG*FIVWVD Trigger: ATCCACCCAGACAATAAACCATCCTCTTCCAACCTC...GTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR GCA 90 bp | GACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATCTCAGACTGATTGACTaGAGTCAGTATGTTACAGAA | + |
Preference number: 2 (lower is better) Translates to: DRKKKGILPFPIPQPPANLRLID*SQYVTE Trigger: TTCTGTAACATACTGACTGCAGTCAATCAGTCTGAG...ATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | CCCAGCAGTTTCCGCCTGACCCTTGGGAGGGCTCTGTaGGGAGCGGCTCCCCCACAGCACGGCCACGGCGTG | + |
Preference number: 3 (lower is better) Translates to: PSSFRLTLGRAL*GAAPPQHGHGV Trigger: CACGCCGTGGCCGTGCTGTGGGGGAGCCGCTCCTCACAGAGCCCTCCCAAGGGTCAGGCGGAAACTGCTGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | AGGCACGTGGACATCTTCCGTGTTACACTGGGCGCCTaGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGC | + |
Preference number: 3 (lower is better) Translates to: RHVDIFRVTLGA*RPLRNGSMGVG Trigger: GCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | TTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGTGCGTGCGTGTGTGTaGAAGGGCGAGGGCTGCTGT | + |
Preference number: 3 (lower is better) Translates to: FRVTLGAWRPLRNGSMGVVRACV*KGEGCC Trigger: ACAGCAGCCCTCGCCCTTCAACACACACGCACGCAC...CACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | GCCCCTTACCACTACAGAGTGGCTGGGTCCTCGGGGTaGGTAGGCCTCCCTCCAGCCCTGGGACCAGATAGA | + |
Preference number: 3 (lower is better) Translates to: APYHYRVAGSSG*VGLPPALGPDR Trigger: TCTATCTGGTCCCAGGGCTGGAGGGAGGCCTACTCACCCCGAGGACCCAGCCACTCTGTAGTGGTAAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACGTCATCTTGGTCCTCTaGGTCCTCAGGAGAGGACAG | + |
Preference number: 3 (lower is better) Translates to: QRGSTGHLGLREMETPGHVILVL*VLRRGQ Trigger: CTGTCCTCTCCTGAGGACCAAGAGGACCAAGATGAC...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | GGTAGCTCAGGCACGTGGACATCTTCCGTGTTACACTaGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGG | + |
Preference number: 3 (lower is better) Translates to: GSSGTWTSSVLH*APGGLSGMAPW Trigger: CCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTGAGCTACC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTaGAGGGCCACTCAGGACGCACGGGCCCAAGACCAG | + |
Preference number: 3 (lower is better) Translates to: SERKAKDGSMCW*RATQDARAQDQ Trigger: CTGGTCTTGGGCCCGTGCGTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | TGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTaGTGGAGGGCCACTCAGGACGCACGGGCCCAAGAC | + |
Preference number: 3 (lower is better) Translates to: CSERKAKDGSMC*WRATQDARAQD Trigger: GTCTTGGGCCCGTGCGTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | TGTGAGGAGCGGCTCCCCCACAGCACGGCCACGGCGTaGGGTTGGAAGAGGATGGTTTATTGTCTGGGTGGA | + |
Preference number: 3 (lower is better) Translates to: CEERLPHSTATA*GWKRMVYCLGG Trigger: TCCACCCAGACAATAAACCATCCTCTTCCAACCTCACGCCGTGGCCGTGCTGTGGGGGAGCCGCTCCTCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACTGCACGGCAAACATGTaGATGGTCATAAGCTGCAGC | + |
Preference number: 3 (lower is better) Translates to: QRGSTGHLGLREMETPGHCTANM*MVISCS Trigger: GCTGCAGCTTATGACCATCAACATGTTTGCCGTGCA...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | ACTGTCCTGGGCCTGAGAAGGGCAGAGCACCCTTGGTaGAGCACTGCTCCTCCTGAGGTGGGTTGTGTGATC | + |
Preference number: 3 (lower is better) Translates to: TVLGLRRAEHPW*STAPPEVGCVI Trigger: GATCACACAACCCACCTCAGGAGGAGCAGTGCTTCACCAAGGGTGCTCTGCCCTTCTCAGGCCCAGGACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | TTACAGACAGAAGTCAGCGTGGGTCCACAGGGCATCTaGGCCTCAGGGAGATGGAGACACCTGGGCACCCTT | + |
Preference number: 3 (lower is better) Translates to: LQTEVSVGPQGI*ASGRWRHLGTL Trigger: AAGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTGACTTCTGTCTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | TTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGCTGGGAAGGCTTTATTaGGTTCCTGTCACAGGTGGT | + |
Preference number: 3 (lower is better) Translates to: FRVTLGAWRPLRNGSMGVLGRLY*VPVTGG Trigger: ACCACCTGTGACAGGAACCAAATAAAGCCTTCCCAG...CACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGGCTAGAGCCAGCTTCTaGGCCCGAAGTTCCCTGATG | + |
Preference number: 3 (lower is better) Translates to: PWHLYLGVQLSQLGDFSEARASF*ARSSLM Trigger: CATCAGGGAACTTCGGGCCAAGAAGCTGGCTCTAGC...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACGGCCACGGCGTGAGGTaGGAAGAGGATGGTTTATTG | + |
Preference number: 3 (lower is better) Translates to: SERKAKDGSMCWWRATQDGHGVR*EEDGLL Trigger: CAATAAACCATCCTCTTCCAACCTCACGCCGTGGCC...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGGCCCAAGGATGCAGCTaGTTCCTGGATCACAGAACG | + |
Preference number: 3 (lower is better) Translates to: PWHLYLGVQLSQLGDFSEAQGCS*FLDHRT Trigger: CGTTCTGTGATCCAGGAACAAGCTGCATCCTTGGGC...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAATCTGTCTCCTGCCCTTaGGCGAGGCCGTCCAGCTCA | + |
Preference number: 3 (lower is better) Translates to: GPSLRPMTAQKENKGKVQSVSCP*ARPSSS Trigger: TGAGCTGGACGGCCTCGCCAAAGGGCAGGAGACAGA...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | GGCCTCAGGGAGATGGAGACACCTGGGCACCCTTCCTaGCAGCTGAAGCCTCTCAGACATTCAGGACAGAGA | + |
Preference number: 3 (lower is better) Translates to: GLREMETPGHPS*QLKPLRHSGQR Trigger: TCTCTGTCCTGAATGTCTGAGAGGCTTCAGCTGTCAGGAAGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | AAGGGCAGAGCACCCTTGGTGAAGCACTGCTCCTCCTaGGGTGGGTTGTGTGATCCCCTGCTTAGCCTGAGA | + |
Preference number: 3 (lower is better) Translates to: KGRAPLVKHCSS*GGLCDPLLSLR Trigger: TCTCAGGCTAAGCAGGGGATCACACAACCCACCTCAGGAGGAGCAGTGCTTCACCAAGGGTGCTCTGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | TCTCCAGCAGCCGAGCCAGACTGGCCAGGTGGTCAATaGAGCCGTTGGTATCTGGTACGAGGAACAAGGGTC | + |
Preference number: 3 (lower is better) Translates to: SPAAEPDWPGGQ*SRWYLVRGTRV Trigger: GACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCTCGGCTGCTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | GGTTTATTGTCTGGGTGGATTGGTAGCTCAGGCACGTaGACATCTTCCGTGTTACACTGGGCGCCTGGCGGC | + |
Preference number: 3 (lower is better) Translates to: GLLSGWIGSSGT*TSSVLHWAPGG Trigger: GCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTGAGCTACCAATCCACCCAGACAATAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | CCCTGGGACCAGATAGAGGGAAAAAGGGTGGGAGCTTaGTGGCCTACTCGGCTTGTCCACCTGTTGTCACTG | + |
Preference number: 3 (lower is better) Translates to: PWDQIEGKRVGA*WPTRLVHLLSL Trigger: CAGTGACAACAGGTGGACAAGCCGAGTAGGCCACCAAGCTCCCACCCTTTTTCCCTCTATCTGGTCCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | CCAGCTAGGAGACTTCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGTATTGTCTGGGTGGATaGGTAGCTCAGGCACGTGGA | + |
Preference number: 3 (lower is better) Translates to: PARRLLRGVTGWEGRTAGYCLGG*VAQARG Trigger: TCCACGTGCCTGAGCTACCAATCCACCCAGACAATA...CCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | CGGGCCCAAGACCAGATGGCCCTTCCCTTAGGCCCATaGCTGCCCAAAAGGAAAACAAGGGCAAAGTGCAAG | + |
Preference number: 3 (lower is better) Translates to: RAQDQMALPLGP*LPKRKTRAKCK Trigger: CTTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCCATCTGGTCTTGGGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | GGTAGCCAAGCATCCAATCAGACCAGACTTTCACACTaGGGAGCAGCTCCTTCAGGTCCGGGACGAAGGAAG | + |
Preference number: 3 (lower is better) Translates to: GSQASNQTRLSH*GAAPSGPGRRK Trigger: CTTCCTTCGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTGAAAGTCTGGTCTGATTGGATGCTTGGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | CTTCCCATTTCCTTTCCCATGGTGTCTGGGACGGGTGCCACTGACACATATTTTGTGCGTGCGTGTGTGTaGAAGGGCGAGGGCTGCTGT | + |
Preference number: 3 (lower is better) Translates to: LPISFPMVSGTGATDTYFVRACV*KGEGCC Trigger: ACAGCAGCCCTCGCCCTTCAACACACACGCACGCAC...AAAATATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | GGCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATaGCAAAGCCAGAAACGGGCTCAACACCCTGGCACC | + |
Preference number: 3 (lower is better) Translates to: GPMSPLLGKEVQ*QSQKRAQHPGT Trigger: GGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR TCA 72 bp | CCTCCTGAGGTGGGTTGTGTGATCCCCTGCTTAGCCTaGGACAGCCTTCTCAATCCTCCTCTACCTCTTTGC | + |
Preference number: 3 (lower is better) Translates to: PPEVGCVIPCLA*DSLLNPPLPLC Trigger: GCAAAGAGGTAGAGGAGGATTGAGAAGGCTGTCTCAGGCTAAGCAGGGGATCACACAACCCACCTCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | GCAGCTCCTTCAGGTCCGGGACGAAGGAAGATACCTTaGTGTCATCTTGGTCCTCTTGGTCCTCAGGAGAGG | + |
Preference number: 3 (lower is better) Translates to: AAPSGPGRRKIP*CHLGPLGPQER Trigger: CCTCTCCTGAGGACCAAGAGGACCAAGATGACATCAAGGTATCTTCCTTCGTCCCGGACCTGAAGGAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 72 bp | CACAGCAACCTGCAAGGGCAGATCCAAAGATGTGGGTaGAGGATTCCAGGTGTCTGGGTAGCCAAGCATCCA | + |
Preference number: 3 (lower is better) Translates to: HSNLQGQIQRCG*RIPGVWVAKHP Trigger: TGGATGCTTGGCTACCCAGACACCTGGAATCCTCCACCCACATCTTTGGATCTGCCCTTGCAGGTTGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | CATCCACAGCAACCTGCAAGGGCAGATCCAAAGATGTaGGTGGAGGATTCCAGGTGTCTGGGTAGCCAAGCA | + |
Preference number: 3 (lower is better) Translates to: HPQQPARADPKM*VEDSRCLGSQA Trigger: TGCTTGGCTACCCAGACACCTGGAATCCTCCACCCACATCTTTGGATCTGCCCTTGCAGGTTGCTGTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | CTGGGACGGGTGCCACTGACACATATTTTCCACCCTTaGATGCCAGCAGAGGCTCTTCTTGTCCACAAAGGG | + |
Preference number: 3 (lower is better) Translates to: LGRVPLTHIFHP*MPAEALLVHKG Trigger: CCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | GGCGTGAGGTTGGAAGAGGATGGTTTATTGTCTGGGTaGATTGGTAGCTCAGGCACGTGGACATCTTCCGTG | + |
Preference number: 3 (lower is better) Translates to: GVRLEEDGLLSG*IGSSGTWTSSV Trigger: CACGGAAGATGTCCACGTGCCTGAGCTACCAATCCACCCAGACAATAAACCATCCTCTTCCAACCTCACGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | CAGACTGGCCAGGTGGTCAATGAAGCCGTTGGTATCTaGTACGAGGAACAAGGGTCTGATCTCCAGCTCCAT | + |
Preference number: 3 (lower is better) Translates to: QTGQVVNEAVGI*YEEQGSDLQLH Trigger: ATGGAGCTGGAGATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGCCAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | GTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCGGCCACGGCGTGAGGTaGGAAGAGGATGGTTTATTG | + |
Preference number: 3 (lower is better) Translates to: VGQKEERYSSIPNPPTPSGHGVR*EEDGLL Trigger: CAATAAACCATCCTCTTCCAACCTCACGCCGTGGCC...GCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR-3UTR CAA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGATGCTGCAGCAATACTaGGAACTCCTTAAGGACCTT | + |
Preference number: 3 (lower is better) Translates to: PWHLYLGVQLSQLGDFSEMLQQY*ELLKDL Trigger: AAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCAT...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CAA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAATCATCATCTGGGTCCTaGTACAGTGGCACCTCAGAC | + |
Preference number: 3 (lower is better) Translates to: GPSLRPMTAQKENKGKVQSSSGS*YSGTSD Trigger: GTCTGAGGTGCCACTGTACAAGGACCCAGATGATGA...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | CATTTCCTTTCCCATGGTGTCTGGGACGGGTGCCACTaGCACATATTTTCCACCCTTGAATGCCAGCAGAGG | + |
Preference number: 3 (lower is better) Translates to: HFLSHGVWDGCH*HIFSTLECQQR Trigger: CCTCTGCTGGCATTCAAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR GCA 72 bp | TCCAAAACAGCCTGGATCTTTTCCTGGCGACGCTGCTaGTCAGCTATCTTCCTTGCTAGAGCCAGCTTCTTG | + |
Preference number: 3 (lower is better) Translates to: SKTAWIFSWRRC*SAIFLARASFL Trigger: CAAGAAGCTGGCTCTAGCAAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | TCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTaGGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTA | + |
Preference number: 3 (lower is better) Translates to: SQRCDGLGRKDS*EGFIWFLSQVV Trigger: TACCACCTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGTATTGTCTGGGTGGATaGGTAGCTCAGGCACGTGGA | + |
Preference number: 3 (lower is better) Translates to: APCPLFWVKKYNDKARNGYCLGG*VAQARG Trigger: TCCACGTGCCTGAGCTACCAATCCACCCAGACAATA...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | AAGGCGATAGATTCAAGTTCATTGCCACGGCTGGTCAAGGCCCGCAGGCAGGAGAGAAATCAGCTAGTGTaGACCAGACATCCACAGCAA | + |
Preference number: 3 (lower is better) Translates to: KAIDSSSLPRLVKARRQERNQLV*TRHPQQ Trigger: TTGCTGTGGATGTCTGGTCAACACTAGCTGATTTCT...CTCCTGCCTGCGGGCCTTGACCAGCCGTGGCAATGAACTTGAATCTATCGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | CAGCCTTCTCAATCCTCCTCTACCTCTTTGCTAGACTaGAGGAATTCATTCCTGGTCGGGAGCCTCCAAGTG | + |
Preference number: 3 (lower is better) Translates to: QPSQSSSTSLLD*RNSFLVGSLQV Trigger: CACTTGGAGGCTCCCGACCAGGAATGAATTCCTTCAGTCTAGCAAAGAGGTAGAGGAGGATTGAGAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR TCA 72 bp | TGCAGCTTGTTCCTGGATCACAGAACGACACTCCTCTaGGAAGCAGTCTTTCAACTGGGAGTTATGCACGGC | + |
Preference number: 3 (lower is better) Translates to: CSLFLDHRTTLL*EAVFQLGVMHG Trigger: GCCGTGCATAACTCCCAGTTGAAAGACTGCTTCTCAGAGGAGTGTCGTTCTGTGATCCAGGAACAAGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | GGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTTaGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGA | + |
Preference number: 3 (lower is better) Translates to: GLGRKDSWEGFI*FLSQVVGVRFR Trigger: TCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | CAGATCCAAAGATGTGGGTGGAGGATTCCAGGTGTCTaGGTAGCCAAGCATCCAATCAGACCAGACTTTCAC | + |
Preference number: 3 (lower is better) Translates to: QIQRCGWRIPGV*VAKHPIRPDFH Trigger: GTGAAAGTCTGGTCTGATTGGATGCTTGGCTACCCAGACACCTGGAATCCTCCACCCACATCTTTGGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR CCA 72 bp | AGTCCCGACTCTCAAATCTCCGTTCGAGGAACTCAATaGATTTTCGGGCCTTTTCTTGCACCACACGGGCAT | + |
Preference number: 3 (lower is better) Translates to: SPDSQISVRGTQ*IFGPFLAPHGH Trigger: ATGCCCGTGTGGTGCAAGAAAAGGCCCGAAAATCCATTGAGTTCCTCGAACGGAGATTTGAGAGTCGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR-3UTR CAA 90 bp | GTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAATACCTTGATGTCATCTaGGTCCTCTTGGTCCTCAGG | + |
Preference number: 3 (lower is better) Translates to: VPVTGGRGKIQNEKSHKEYLDVI*VLLVLR Trigger: CCTGAGGACCAAGAGGACCAAGATGACATCAAGGTA...TTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
||
3UTR GCA 72 bp | AAAGAAGAGTCTGAGGAAATTTCCCCAAGAGGGTACTaGAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGC | + |
Preference number: 3 (lower is better) Translates to: KEESEEISPRGY*SERKAKDGSMC Trigger: GCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGAAATTTCCTCAGACTCTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 72 bp | GAAAACATAGCCAAGCCCAAGGATGCAGCTTGTTCCTaGATCACAGAACGACACTCCTCTGAGAAGCAGTCT | + |
Preference number: 3 (lower is better) Translates to: ENIAKPKDAACS*ITERHSSEKQS Trigger: AGACTGCTTCTCAGAGGAGTGTCGTTCTGTGATCCAGGAACAAGCTGCATCCTTGGGCTTGGCTATGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CCA 72 bp | GCTTTAGCAGAGTCCTTAAGTAGGCATGTGCAGCGCTaGACCAGTAGAGAAAACATAGCCAAGCCCAAGGAT | + |
Preference number: 3 (lower is better) Translates to: ALAESLSRHVQR*TSRENIAKPKD Trigger: ATCCTTGGGCTTGGCTATGTTTTCTCTACTGGTCCAGCGCTGCACATGCCTACTTAAGGACTCTGCTAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CAA 90 bp | AGAAAATACTTCAGCACTGTGACCCTTTTGCAGTCAGCTGCAATAACCTTATCCGGGCGAGGGCTGCTGTaGCTGTTACAGACAGAAGTC | + |
Preference number: 3 (lower is better) Translates to: RKYFSTVTLLQSAAITLSGRGLL*LLQTEV Trigger: GACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCCC...GGATAAGGTTATTGCAGCTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CAA 90 bp | GACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATAGCACTGTGACCCTTTaGCAGTCAGCTGCAATAACC | + |
Preference number: 3 (lower is better) Translates to: DRKKKGILPFPIPQPPANSTVTL*QSAAIT Trigger: GGTTATTGCAGCTGACTGCAAAAGGGTCACAGTGCT...ATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR GCA 72 bp | TGCAGCATACGGGTACTTCCAATAGGAGATGGGCTATaGTGCAGCAATACTTGGAACTCCTTAAGGACCTTC | + |
Preference number: 3 (lower is better) Translates to: CSIRVLPIGDGL*CSNTWNSLRTF Trigger: GAAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTATGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR-3UTR CAA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGGAAGAGGATGGTTTATaGTCTGGGTGGATTGGTAGC | + |
Preference number: 3 (lower is better) Translates to: GRLYLVPVTGGRGKIQNEEEDGL*SGWIGS Trigger: GCTACCAATCCACCCAGACAATAAACCATCCTCTTC...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CCA 72 bp | CATAAGCTGCAGCATACGGGTACTTCCAATAGGAGATaGGCTATGCTGCAGCAATACTTGGAACTCCTTAAG | + |
Preference number: 3 (lower is better) Translates to: HKLQHTGTSNRR*AMLQQYLELLK Trigger: CTTAAGGAGTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTATGCTGCAGCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR TCA 72 bp | TCATCATCTGGGTCCTTGTACAGTGGCACCTCAGACTaGTTGACTGCAGTCAGTATGTTACAGAAATCAGCT | + |
Preference number: 3 (lower is better) Translates to: SSSGSLYSGTSD*LTAVSMLQKSA Trigger: AGCTGATTTCTGTAACATACTGACTGCAGTCAATCAGTCTGAGGTGCCACTGTACAAGGACCCAGATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR TCA 72 bp | AGACATTCAGGACAGAGACTGTGCAGACTGAGGGGTTaGTCAGTTTCCTTGCATCTAATGGAAACTTTAGAA | + |
Preference number: 3 (lower is better) Translates to: RHSGQRLCRLRG*SVSLHLMETLE Trigger: TTCTAAAGTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGTCCTGAATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | ATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTCGTGGCCTCTCCTTaGCCCGATCCTGGCGCCGCC | + |
Preference number: 4 (lower is better) Translates to: IFRVTLGAWRPLRNGSMGVVASP*PDPGAA Trigger: GGCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGAC...CCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | CGCACGGGCCCAAGACCAGATGGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGTGGCCCGAAGTTCCCTaGTGTCATCCTCACCCCCAC | + |
Preference number: 4 (lower is better) Translates to: RTGPRPDGPSLRPMTAQKWPEVP*CHPHPH Trigger: GTGGGGGTGAGGATGACATCAGGGAACTTCGGGCCA...CTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCCATCTGGTCTTGGGCCCGTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | TTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGCGAGGAACAAGGGTCTaGTCTCCAGCTCCATCTGCC | + |
Preference number: 4 (lower is better) Translates to: FRVTLGAWRPLRNGSMGVRGTRV*SPAPSA Trigger: GGCAGATGGAGCTGGAGATCAGACCCTTGTTCCTCG...CACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | AGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCGTTCATTGCCACGGCTaGTCAAGGCCCGCAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SHLPAKSWQPRRVPAVSAVHCHG*SRPAGR Trigger: CCTGCCTGCGGGCCTTGACCAGCCGTGGCAATGAAC...GGCGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | TGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCCCCACATTATCTTTGACTaGCCTCACCACAGGGGAGTC | + |
Preference number: 4 (lower is better) Translates to: CYTGRLAASQEWLHGGGPHIIFD*PHHRGV Trigger: GACTCCCCTGTGGTGAGGTCAGTCAAAGATAATGTG...GGGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | TGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCCCAGTGGCACCTCAGACTaGTTGACTGCAGTCAGTATG | + |
Preference number: 4 (lower is better) Translates to: CYTGRLAASQEWLHGGGPSGTSD*LTAVSM Trigger: CATACTGACTGCAGTCAATCAGTCTGAGGTGCCACT...GGGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | CGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTCATCCTCACCCCCACTaGCTTCAGCCTCTGAATCTT | + |
Preference number: 4 (lower is better) Translates to: RGSTGHLGLREMETPGHPHPHPH*LQPLNL Trigger: AAGATTCAGAGGCTGAAGGCAGTGGGGGTGAGGATG...AGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | TGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCCCGCAGATCCAAAGATGTaGGTGGAGGATTCCAGGTGT | + |
Preference number: 4 (lower is better) Translates to: CYTGRLAASQEWLHGGGPADPKM*VEDSRC Trigger: ACACCTGGAATCCTCCACCCACATCTTTGGATCTGC...GGGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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3UTR CAA 72 bp | GGAGCGGCTCCCCCACAGCACGGCCACGGCGTGAGGTaGGAAGAGGATGGTTTATTGTCTGGGTGGATTGGT | + |
Preference number: 4 (lower is better) Translates to: GAAPPQHGHGVR*EEDGLLSGWIG Trigger: ACCAATCCACCCAGACAATAAACCATCCTCTTCCAACCTCACGCCGTGGCCGTGCTGTGGGGGAGCCGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | AGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCCTTGTCTCGGGTGTCTaGGCTCCTGCTTCTCAGAGC | + |
Preference number: 4 (lower is better) Translates to: SHLPAKSWQPRRVPAVSALVSGV*APASQS Trigger: GCTCTGAGAAGCAGGAGCTCAGACACCCGAGACAAG...GGCGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | GTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTTCCTGAGTTCAGTTCTGAGCTaGGCCATCTTCTCCATGCCC | + |
Preference number: 4 (lower is better) Translates to: VHRASGPQGDGDTWAPFLSSVLS*AIFSMP Trigger: GGGCATGGAGAAGATGGCTCAGCTCAGAACTGAACT...CAGGAAGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | TGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCCCGCACCTCAGACTGATTaGCTGCAGTCAGTATGTTAC | + |
Preference number: 4 (lower is better) Translates to: CYTGRLAASQEWLHGGGPAPQTD*LQSVCY Trigger: GTAACATACTGACTGCAGTCAATCAGTCTGAGGTGC...GGGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | GTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTTCCTGTGGGACGGGTGCCACTaGCACATATTTTCCACCCTT | + |
Preference number: 4 (lower is better) Translates to: VHRASGPQGDGDTWAPFLWDGCH*HIFSTL Trigger: AAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCA...CAGGAAGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | CGCACGGGCCCAAGACCAGATGGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGTGGAGCTCCTGTTGCTaGATGTTCCGCACGTGCTGT | + |
Preference number: 4 (lower is better) Translates to: RTGPRPDGPSLRPMTAQKWSSCC*MFRTCC Trigger: ACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCA...CTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCCATCTGGTCTTGGGCCCGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACTTTAGGGCAGGCTTCTaGTCAGGATTGTTTGGGTCC | + |
Preference number: 4 (lower is better) Translates to: QRGSTGHLGLREMETPGHFRAGF*SGLFGS Trigger: GGACCCAAACAATCCTGACCAGAAGCCTGCCCTAAA...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTAGGATTCCAGGTGTCTaGGTAGCCAAGCATCCAATC | + |
Preference number: 4 (lower is better) Translates to: RGSTGHLGLREMETPGHPRIPGV*VAKHPI Trigger: GATTGGATGCTTGGCTACCCAGACACCTGGAATCCT...AGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | CAGGCACGTGGACATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAAATCTGCCCTGCCTGCTaGCTCTTTGGTAATGGTCTG | + |
Preference number: 4 (lower is better) Translates to: QARGHLPCYTGRLAASQEICPAC*LFGNGL Trigger: CAGACCATTACCAAAGAGTCAGCAGGCAGGGCAGAT...TTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | CAGGCACGTGGACATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAAGAGAACCTGATGAACTaGCAGATAGGGCAGTGTGGG | + |
Preference number: 4 (lower is better) Translates to: QARGHLPCYTGRLAASQEENLMN*QIGQCG Trigger: CCCACACTGCCCTATCTGTCAGTTCATCAGGTTCTC...TTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | CAGGCACGTGGACATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGAAAGCAGGTTGCTaGGCTGCAGTTCCTGGTTGT | + |
Preference number: 4 (lower is better) Translates to: QARGHLPCYTGRLAASQEWKAGC*AAVPGC Trigger: ACAACCAGGAACTGCAGCTCAGCAACCTGCTTTCCA...TTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCGAGAATGTGATGGATaGATCCAAATCTCCAGGCGA | + |
Preference number: 4 (lower is better) Translates to: QRGSTGHLGLREMETPGHRECDG*IQISRR Trigger: TCGCCTGGAGATTTGGATTCATCCATCACATTCTCG...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | TGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCCCATAGGAGATGGGCTATaGTGCAGCAATACTTGGAAC | + |
Preference number: 4 (lower is better) Translates to: CYTGRLAASQEWLHGGGPIGDGL*CSNTWN Trigger: GTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTAT...GGGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | AGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCCTGAGCTGCAGTTCCTaGTTGTCAGCCACTCGGAGA | + |
Preference number: 4 (lower is better) Translates to: SHLPAKSWQPRRVPAVSALSCSS*LSATRR Trigger: TCTCCGAGTGGCTGACAACCAGGAACTGCAGCTCAG...GGCGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | TGGTCAAGGCCCGCAGGCAGGAGTCCCGACTCTCAAATCTCCGTTCGAGGAACTAGGGGCGCCCATTCTTaGGAGCAATGTGCTGAGCCT | + |
Preference number: 4 (lower is better) Translates to: WSRPAGRSPDSQISVRGTRGAHS*EQCAEP Trigger: AGGCTCAGCACATTGCTCCCAAGAATGGGCGCCCCT...AGTTCCTCGAACGGAGATTTGAGAGTCGGGACTCCTGCCTGCGGGCCTTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACACCTTGATGTCATCTTaGTCCTCTTGGTCCTCAGGA | + |
Preference number: 4 (lower is better) Translates to: QRGSTGHLGLREMETPGHTLMSS*SSWSSG Trigger: TCCTGAGGACCAAGAGGACCAAGATGACATCAAGGT...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | TGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGCCTGGATCTTTTCCTaGCGACGCTGCTGCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: CSERKAKDGSMCWWRATQAWIFS*RRCCSA Trigger: AGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGC...CTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | CCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGAGTTCAGTTCTGAGCTaGGCCATCTTCTCCATGCCC | + |
Preference number: 4 (lower is better) Translates to: PVTSLLNLGSPGGSQQFPSSVLS*AIFSMP Trigger: GGGCATGGAGAAGATGGCTCAGCTCAGAACTGAACT...CGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | CCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGTGGCCAGGTGGTCAATaGAGCCGTTGGTATCTGGTA | + |
Preference number: 4 (lower is better) Translates to: PVTSLLNLGSPGGSQQFPWPGGQ*SRWYLV Trigger: TACCAGATACCAACGGCTTCATTGACCACCTGGCCA...CGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | GGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCACCTCAGCACTGTTGTTaGTACCAGCTGAGCTGGTAC | + |
Preference number: 4 (lower is better) Translates to: GEGCCCCYRQKSAWVHRAPQHCC*YQLSWY Trigger: GTACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGG...TGCCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGGGTGTCTGAGCTCCTaGTTCTCAGAGCCCTTACCC | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRGCLSS*FSEPLP Trigger: GGGTAAGGGCTCTGAGAAGCAGGAGCTCAGACACCC...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | AGGGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCAGAGGGCTATAGCCTaGATAGGGATACTGAGAGGC | + |
Preference number: 4 (lower is better) Translates to: RARAAVAVTDRSQRGSTGQRAIA*IGILRG Trigger: GCCTCTCAGTATCCCTATGCAGGCTATAGCCCTCTG...CCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CCAGCTAGGAGACTTCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGACTCGGAGAAGCCGATaGAGCTCCTGTTGCTGCATG | + |
Preference number: 4 (lower is better) Translates to: PARRLLRGVTGWEGRTAGTRRSR*SSCCCM Trigger: CATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGT...CCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | TGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGCCAGACTGGCCAGGTaGTCAATGAAGCCGTTGGTA | + |
Preference number: 4 (lower is better) Translates to: CSERKAKDGSMCWWRATQARLAR*SMKPLV Trigger: TACCAACGGCTTCATTGACCACCTGGCCAGTCTGGC...CTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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3UTR CAA 72 bp | GCCCTGGGACCAGATAGAGGGAAAAAGGGTGGGAGCTaGGTGGCCTACTCGGCTTGTCCACCTGTTGTCACT | + |
Preference number: 4 (lower is better) Translates to: ALGPDRGKKGGS*VAYSACPPVVT Trigger: AGTGACAACAGGTGGACAAGCCGAGTAGGCCACCAAGCTCCCACCCTTTTTCCCTCTATCTGGTCCCAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | CGCACGGGCCCAAGACCAGATGGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGAGAACGACACTCCTCTaGGAAGCAGTCTTTCAACTG | + |
Preference number: 4 (lower is better) Translates to: RTGPRPDGPSLRPMTAQKRTTLL*EAVFQL Trigger: CAGTTGAAAGACTGCTTCTCAGAGGAGTGTCGTTCT...CTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCCATCTGGTCTTGGGCCCGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGCCCTCGCAGTTCCGATaGGGAGATCCGCACACGCTC | + |
Preference number: 4 (lower is better) Translates to: APCPLFWVKKYNDKARNGPSQFR*GDPHTL Trigger: GAGCGTGTGCGGATCTCCGCATCGGAACTGCGAGGG...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | TGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCCCTGGAAAAGTTTCCTGTaGCTGACTATTTTCTGCATC | + |
Preference number: 4 (lower is better) Translates to: CYTGRLAASQEWLHGGGPWKSFL*LTIFCI Trigger: GATGCAGAAAATAGTCAGGCACAGGAAACTTTTCCA...GGGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGCAGCTGAGCTGGTACTaGAAGTGCGGTAGCGATTCC | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRQLSWY*KCGSDS Trigger: GGAATCGCTACCGCACTTGCAGTACCAGCTCAGCTG...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | ATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGCTGTATCGTTGGCTTaGTCCCGATACCTAGAGATA | + |
Preference number: 4 (lower is better) Translates to: IFRVTLGAWRPLRNGSMGAVSLA*SRYLEI Trigger: TATCTCTAGGTATCGGGAGCAAGCCAACGATACAGC...CCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | AGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCTTTTCCTGGCGACGCTaGTGCTCAGCTATCTTCCTT | + |
Preference number: 4 (lower is better) Translates to: SHLPAKSWQPRRVPAVSAFSWRR*CSAIFL Trigger: AAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAA...GGCGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGTGCTACCAGCTGAGCTaGTACTGCAAGTGCGGTAGC | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRCYQLS*YCKCGS Trigger: GCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCA...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCATCCTTGGCCCGATCCTaGCGCCGCCGGCGACATCCA | + |
Preference number: 4 (lower is better) Translates to: KWDRKKKGILPFPIPQPPSLARS*RRRRHP Trigger: TGGATGTCGCCGGCGGCGCCAGGATCGGGCCAAGGA...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGCTGAGCTGCAGTTCCTaGTTGTCAGCCACTCGGAGA | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRLSCSS*LSATRR Trigger: TCTCCGAGTGGCTGACAACCAGGAACTGCAGCTCAG...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | AGGGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGATCCAAAGATGTGGGTaGAGGATTCCAGGTGTCTGG | + |
Preference number: 4 (lower is better) Translates to: RARAAVAVTDRSQRGSTGIQRCG*RIPGVW Trigger: CCAGACACCTGGAATCCTCCACCCACATCTTTGGAT...CCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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3UTR CAA 72 bp | CACGGCCACGGCGTGAGGTTGGAAGAGGATGGTTTATaGTCTGGGTGGATTGGTAGCTCAGGCACGTGGACA | + |
Preference number: 4 (lower is better) Translates to: HGHGVRLEEDGL*SGWIGSSGTWT Trigger: TGTCCACGTGCCTGAGCTACCAATCCACCCAGACAATAAACCATCCTCTTCCAACCTCACGCCGTGGCCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CAA 72 bp | AGCCGAGCCAGACTGGCCAGGTGGTCAATGAAGCCGTaGGTATCTGGTACGAGGAACAAGGGTCTGATCTCC | + |
Preference number: 4 (lower is better) Translates to: SRARLARWSMKP*VSGTRNKGLIS Trigger: GGAGATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCTCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 72 bp | ATGTCCTCACTTCGGAAGGCGATAGATTCAAGTTCATaGCCACGGCTGGTCAAGGCCCGCAGGCAGGAGTCC | + |
Preference number: 4 (lower is better) Translates to: MSSLRKAIDSSS*PRLVKARRQES Trigger: GGACTCCTGCCTGCGGGCCTTGACCAGCCGTGGCAATGAACTTGAATCTATCGCCTTCCGAAGTGAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACTTGGGAGCAATGTGCTaGGCCTTCAGATACCAACTG | + |
Preference number: 4 (lower is better) Translates to: SERKAKDGSMCWWRATQDLGAMC*AFRYQL Trigger: CAGTTGGTATCTGAAGGCTCAGCACATTGCTCCCAA...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGGAGGACAAAGATACCTaGTTCTTCAGTCGTGGCCTC | + |
Preference number: 4 (lower is better) Translates to: PWHLYLGVQLSQLGDFSEEDKDT*FFSRGL Trigger: GAGGCCACGACTGAAGAAGCAGGTATCTTTGTCCTC...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | AAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATGACCCTCACAGCCCTTCCCAGACTCAGTaGCCTGGGCAGACCGAGAAT | + |
Preference number: 4 (lower is better) Translates to: KGILPFPIPQPPANDPHSPSQTQ*PGQTEN Trigger: ATTCTCGGTCTGCCCAGGGCACTGAGTCTGGGAAGG...GCTGTGAGGGTCATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGTTTCTGAGCTCCTCCTaGACCCTAGGACATCAGGCT | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRFLSSS*TLGHQA Trigger: AGCCTGATGTCCTAGGGTCCAGGAGGAGCTCAGAAA...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGCTGAGAGGCAGGGCCTaGTGTCCGAGGGTAATAATA | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRLRGRA*CPRVII Trigger: TATTATTACCCTCGGACACCAGGCCCTGCCTCTCAG...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCAAAGGCTTGCTTCGAATaGCAAGCCCATCCATGTAGT | + |
Preference number: 4 (lower is better) Translates to: GEGCCCCYRQKSAWVHRAKACFE*QAHPCS Trigger: ACTACATGGATGGGCTTGCCATTCGAAGCAAGCCTT...TGCCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CCTGGATCTTTTCCTGGCGACGCTGCTGCTCAGCTATCTTCCTTGCTAGAGCCACCAGACTCAGTGCCCTaGGCAGACCGAGAATGTGAT | + |
Preference number: 4 (lower is better) Translates to: PGSFPGDAAAQLSSLLEPPDSVP*ADRECD Trigger: ATCACATTCTCGGTCTGCCCAGGGCACTGAGTCTGG...TGGCTCTAGCAAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGTGGGTCCTTGTACAGTaGCACCTCAGACTGATTGAC | + |
Preference number: 4 (lower is better) Translates to: PWHLYLGVQLSQLGDFSEWVLVQ*HLRLID Trigger: GTCAATCAGTCTGAGGTGCCACTGTACAAGGACCCA...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGTCTTCCAAAACAGCCTaGATCTTTTCCTGGCGACGC | + |
Preference number: 4 (lower is better) Translates to: PWHLYLGVQLSQLGDFSESSKTA*IFSWRR Trigger: GCGTCGCCAGGAAAAGATCCAGGCTGTTTTGGAAGA...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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3UTR CAA 72 bp | CAGGTCCGGGACGAAGGAAGATACCTTGATGTCATCTaGGTCCTCTTGGTCCTCAGGAGAGGACAGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: QVRDEGRYLDVI*VLLVLRRGQLS Trigger: GCTCAGCTGTCCTCTCCTGAGGACCAAGAGGACCAAGATGACATCAAGGTATCTTCCTTCGTCCCGGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | CGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTCGGTCATTACTTTGGTaGTTTTCTATCTCGGTTTTA | + |
Preference number: 4 (lower is better) Translates to: RGSTGHLGLREMETPGHPRSLLW*FSISVL Trigger: TAAAACCGAGATAGAAAAGCACCAAAGTAATGACCG...AGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | AGGAAATTTCCCCAAGAGGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCACACTGGGACTCAGGCTaGCCAGACCATTCTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: RKFPQEGTAVKGRPRMGAHWDSG*PDHSPA Trigger: AGCAGGAGAATGGTCTGGGCAGCCTGAGTCCCAGTG...TGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGAAATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | AAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATGACCCTCACAGCTCCTGGCGACGCTGCTaGTCAGCTATCTTCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: KGILPFPIPQPPANDPHSSWRRC*SAIFLA Trigger: AGCAAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGA...GCTGTGAGGGTCATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | CCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACTGCCAGGATGTACTTCCTaGTCTCCAGCAGCCGAGCCA | + |
Preference number: 4 (lower is better) Translates to: PVTGGRGKIQNEKSHKELPGCTS*SPAAEP Trigger: TGGCTCGGCTGCTGGAGAGCAGGAAGTACATCCTGG...CAGTTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATCCTGCGGAGCCAGAGTaGCCAGGATCCCTCGCAGTT | + |
Preference number: 4 (lower is better) Translates to: DRKKKGILPFPIPQPPANPAEPE*PGSLAV Trigger: AACTGCGAGGGATCCTGGCCACTCTGGCTCCGCAGG...ATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | AGGGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGTTCCCTTTTCTCCCTTaGCAGTTCTTACACGGTCAT | + |
Preference number: 4 (lower is better) Translates to: RARAAVAVTDRSQRGSTGFPFLP*QFLHGH Trigger: ATGACCGTGTAAGAACTGCCAAGGGAGAAAAGGGAA...CCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACTGGGTTCTCACTGTTTaGATCCTTGAGAAGCTGCCT | + |
Preference number: 4 (lower is better) Translates to: SERKAKDGSMCWWRATQDWVLTV*ILEKLP Trigger: AGGCAGCTTCTCAAGGATCCAAACAGTGAGAACCCA...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | ACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGCTTCCCATGGGCATaGAGAAAACTGAGGATGAAC | + |
Preference number: 4 (lower is better) Translates to: TAVKGRPRMGACAGGGPLSFPWA*RKLRMN Trigger: GTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCT...GAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | TCTTCCAGGATAAGCAGGGTGAGGTCATCATCTGGGTCCTTGTACAGTGGCACCTGTCTCCATCATCACTaGGACTCAGGCTGCCCAGAC | + |
Preference number: 4 (lower is better) Translates to: SSRISRVRSSSGSLYSGTCLHHH*DSGCPD Trigger: GTCTGGGCAGCCTGAGTCCCAGTGATGATGGAGACA...GGTGCCACTGTACAAGGACCCAGATGATGACCTCACCCTGCTTATCCTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 72 bp | AGCAGCTCCTTCAGGTCCGGGACGAAGGAAGATACCTaGATGTCATCTTGGTCCTCTTGGTCCTCAGGAGAG | + |
Preference number: 4 (lower is better) Translates to: SSSFRSGTKEDT*MSSWSSWSSGE Trigger: CTCTCCTGAGGACCAAGAGGACCAAGATGACATCAAGGTATCTTCCTTCGTCCCGGACCTGAAGGAGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | TGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGTCCAAGAAATGTAGCTaGGGTGTCTGGCTTTTTAGG | + |
Preference number: 4 (lower is better) Translates to: CSERKAKDGSMCWWRATQSKKCS*GVWLFR Trigger: CCTAAAAAGCCAGACACCTCAGCTACATTTCTTGGA...CTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | GACGGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTTGGTTCCTGTCACAGTGGAAAGCAGGTTGCTaGGCTGCAGTTCCTGGTTGT | + |
Preference number: 4 (lower is better) Translates to: DGLGRKDSWEGFIWFLSQWKAGC*AAVPGC Trigger: ACAACCAGGAACTGCAGCTCAGCAACCTGCTTTCCA...CTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGTATCTTTGCGCTGTCTaGGTTCCTTTAGTTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: PVTSLLNLGSPGGSQQFPYLCAV*VPLVPS Trigger: TGAAGGAACTAAAGGAACCCAGACAGCGCAAAGATA...CGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | TTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGATAGATTTCCAAATCTaGACGCCTATTATCTTTGCG | + |
Preference number: 4 (lower is better) Translates to: FRVTLGAWRPLRNGSMGVIDFQI*TPIIFA Trigger: CGCAAAGATAATAGGCGTCCAGATTTGGAAATCTAT...CACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACTGACTCGGAGAAGCCGATaGAGCTCCTGTTGCTGCATG | + |
Preference number: 4 (lower is better) Translates to: PVTGGRGKIQNEKSHKELTRRSR*SSCCCM Trigger: CATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGT...CAGTTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGTGGGTTCTCACTGTTTaGATCCTTGAGAAGCTGCCT | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRWVLTV*ILEKLP Trigger: AGGCAGCTTCTCAAGGATCCAAACAGTGAGAACCCA...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | CCTGTTGTCACTGTAGCCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGAAGGCTTGCTTCGAATaGCAAGCCCATCCATGTAGT | + |
Preference number: 4 (lower is better) Translates to: PVVTVASHLPAKSWQPRRKACFE*QAHPCS Trigger: ACTACATGGATGGGCTTGCCATTCGAAGCAAGCCTT...CCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGGCTACAGTGACAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CAA 72 bp | CGGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTaGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAG | + |
Preference number: 4 (lower is better) Translates to: RVGKEGQLGRLY*VPVTGGRGKIQ Trigger: CTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CAA 72 bp | TCTGGGACGGGTGCCACTGACACATATTTTCCACCCTaGAATGCCAGCAGAGGCTCTTCTTGTCCACAAAGG | + |
Preference number: 4 (lower is better) Translates to: SGTGATDTYFPP*NASRGSSCPQR Trigger: CCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCACCTTCATGTTTTCTCTaGTCCCGGCCTGCGGAGCCA | + |
Preference number: 4 (lower is better) Translates to: KWDRKKKGILPFPIPQPPPSCFL*SRPAEP Trigger: TGGCTCCGCAGGCCGGGAGCAGAGAAAACATGAAGG...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | ACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCTTTTTCGTAAAGGCTTaGTTCGAATGGCAAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: TAVKGRPRMGACAGGGPLFFVKA*FEWQAH Trigger: ATGGGCTTGCCATTCGAAGCAAGCCTTTACGAAAAA...GAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | CGCACGGGCCCAAGACCAGATGGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGTCAAATTCCTCATGCTaGTTCTTTTCCATCTGTTCA | + |
Preference number: 4 (lower is better) Translates to: RTGPRPDGPSLRPMTAQKSNSSC*FFSICS Trigger: TGAACAGATGGAAAAGAAGCAGCATGAGGAATTTGA...CTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCCATCTGGTCTTGGGCCCGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGCCTTCCCAGACTCAGTaGCCTGGGCAGACCGAGAAT | + |
Preference number: 4 (lower is better) Translates to: GRLYLVPVTGGRGKIQNEPSQTQ*PGQTEN Trigger: ATTCTCGGTCTGCCCAGGGCACTGAGTCTGGGAAGG...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCCACTGGGACTCAGGCTaGCCAGACCATTCTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSHWDSG*PDHSPA Trigger: AGCAGGAGAATGGTCTGGGCAGCCTGAGTCCCAGTG...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | GGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCAGTAGATCTGCAGGTCTaGTTTCTTGCTTCTTTTGAT | + |
Preference number: 4 (lower is better) Translates to: GEGCCCCYRQKSAWVHRAVDLQV*FLASFD Trigger: ATCAAAAGAAGCAAGAAACCAGACCTGCAGATCTAC...TGCCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAAAGAGCCAGGCTTTCCTaGGACAGAGTCATCAGCCAC | + |
Preference number: 4 (lower is better) Translates to: VPVTGGRGKIQNEKSHKERARLS*DRVISH Trigger: GTGGCTGATGACTCTGTCCCAGGAAAGCCTGGCTCT...TTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCCTGCTTCTTCAGTCGTaGCCTCTCCTTGGCCCGATC | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSLLLQS*PLLGPI Trigger: GATCGGGCCAAGGAGAGGCCACGACTGAAGAAGCAG...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | AAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATGACCCTCACAGCCTTACCCCCACTGCTTaGGCCTTTGTCAGACTTCAT | + |
Preference number: 4 (lower is better) Translates to: KGILPFPIPQPPANDPHSLTPTA*AFVRLH Trigger: ATGAAGTCTGACAAAGGCCCAAGCAGTGGGGGTAAG...GCTGTGAGGGTCATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCTCGGGGATTTGTAGGGCCTACTaGGTACTGCAGAGGGCTATA | + |
Preference number: 4 (lower is better) Translates to: GNFRISAPYHYRVAGSSGICRAY*VLQRAI Trigger: TATAGCCCTCTGCAGTACCCAGTAGGCCCTACAAAT...CCCCGAGGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAGGGGCGCCCATTCTTaGGAGCAATGTGCTGAGCCT | + |
Preference number: 4 (lower is better) Translates to: GRLYLVPVTGGRGKIQNERGAHS*EQCAEP Trigger: AGGCTCAGCACATTGCTCCCAAGAATGGGCGCCCCT...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | TGTGATCCCCTGCTTAGCCTGAGACAGCCTTCTCAATCCTCCTCTACCTCTTTGACCAGACTTTCACACTaGGGAGCAGCTCCTTCAGGT | + |
Preference number: 4 (lower is better) Translates to: CDPLLSLRQPSQSSSTSLTRLSH*GAAPSG Trigger: ACCTGAAGGAGCTGCTCCCCAGTGTGAAAGTCTGGT...CAAAGAGGTAGAGGAGGATTGAGAAGGCTGTCTCAGGCTAAGCAGGGGATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGGGTGAGGTCATCATCTaGGTCCTTGTACAGTGGCAC | + |
Preference number: 4 (lower is better) Translates to: APCPLFWVKKYNDKARNGGEVII*VLVQWH Trigger: GTGCCACTGTACAAGGACCCAGATGATGACCTCACC...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAAGAAGCCGTTGGTATCTaGTACGAGGAACAAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: GPSLRPMTAQKENKGKVQEAVGI*YEEQGS Trigger: AGACCCTTGTTCCTCGTACCAGATACCAACGGCTTC...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | ACAGAGACTGTGCAGACTGAGGGGTTGATCAGTTTCCTTGCATCTAATGGAAACCTGTCTCCTGCCCTTTaGCGAGGCCGTCCAGCTCAT | + |
Preference number: 4 (lower is better) Translates to: TETVQTEGLISFLASNGNLSPAL*RGRPAH Trigger: ATGAGCTGGACGGCCTCGCCAAAGGGCAGGAGACAG...GTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | ACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCGTTCGAGGAACTCAATaGATTTTCGGGCCTTTTCTT | + |
Preference number: 4 (lower is better) Translates to: TAVKGRPRMGACAGGGPLVRGTQ*IFGPFL Trigger: AAGAAAAGGCCCGAAAATCCATTGAGTTCCTCGAAC...GAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCTGCTTGGGCCTGACGTaGATCACCCCAAGATGTAGG | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSCLGLT*ITPRCR Trigger: CCTACATCTTGGGGTGATTCACGTCAGGCCCAAGCA...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | GGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCAGTAACCTGTAGTTTCTaGAGCAAACTATCAAAGAAG | + |
Preference number: 4 (lower is better) Translates to: GEGCCCCYRQKSAWVHRAVTCSF*SKLSKK Trigger: CTTCTTTGATAGTTTGCTTCAGAAACTACAGGTTAC...TGCCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | ACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCCAAATCATACTTCGTTaGGCACTGATCAAGGCATAT | + |
Preference number: 4 (lower is better) Translates to: TAVKGRPRMGACAGGGPLQIILR*ALIKAY Trigger: ATATGCCTTGATCAGTGCTCAACGAAGTATGATTTG...GAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | TGTGATCCCCTGCTTAGCCTGAGACAGCCTTCTCAATCCTCCTCTACCTCTTTGTCAGGAGAGGACAGCTaGGCTTTAGCAGAGTCCTTA | + |
Preference number: 4 (lower is better) Translates to: CDPLLSLRQPSQSSSTSLSGEDS*ALAESL Trigger: TAAGGACTCTGCTAAAGCTCAGCTGTCCTCTCCTGA...CAAAGAGGTAGAGGAGGATTGAGAAGGCTGTCTCAGGCTAAGCAGGGGATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | AAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATGACCCTCACAGCAATACTTCAGCACTGTaGCCCTTTTGCAGTCAGCTG | + |
Preference number: 4 (lower is better) Translates to: KGILPFPIPQPPANDPHSNTSAL*PFCSQL Trigger: CAGCTGACTGCAAAAGGGTCACAGTGCTGAAGTATT...GCTGTGAGGGTCATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCTGGAGCTCCTGTTGCTaGATGTTCCGCACGTGCTGT | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSWSSCC*MFRTCC Trigger: ACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCA...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | CGCACGGGCCCAAGACCAGATGGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGATATCAAATTCCTCATaGTGCTTCTTTTCCATCTGT | + |
Preference number: 4 (lower is better) Translates to: RTGPRPDGPSLRPMTAQKISNSS*CFFSIC Trigger: ACAGATGGAAAAGAAGCAGCATGAGGAATTTGATAT...CTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCCATCTGGTCTTGGGCCCGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | CCAGAGAGAAGCCGATCCTCTTCCAGGATAAGCAGGGTGAGGTCATCATCTGGGGTGTCATCCCCAACATaGCGGAAAGTAGACTTCTTT | + |
Preference number: 4 (lower is better) Translates to: PERSRSSSRISRVRSSSGVSSPT*RKVDFF Trigger: AAAGAAGTCTACTTTCCGGCATGTTGGGGATGACAC...CCCAGATGATGACCTCACCCTGCTTATCCTGGAAGAGGATCGGCTTCTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGACAGATAGGGCAGTGTaGGCAGGCAGAATCAGGATA | + |
Preference number: 4 (lower is better) Translates to: APCPLFWVKKYNDKARNGTDRAV*AGRIRI Trigger: TATCCTGATTCTGCCTGCCCACACTGCCCTATCTGT...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCCCAGACTCAGTGCCCTaGGCAGACCGAGAATGTGAT | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSPDSVP*ADRECD Trigger: ATCACATTCTCGGTCTGCCCAGGGCACTGAGTCTGG...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | GTAAAGAAGTACAATGACAAAGCCAGAAACGGGCTCAACACCCTGGCACCTCTACCATTTCCTTTCCCATaGTGTCTGGGACGGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: VKKYNDKARNGLNTLAPLPFPFP*CLGRVP Trigger: TGGCACCCGTCCCAGACACCATGGGAAAGGAAATGG...TAGAGGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | CCAGCTAGGAGACTTCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGGTAACCTGTAGTTTCTaGAGCAAACTATCAAAGAAG | + |
Preference number: 4 (lower is better) Translates to: PARRLLRGVTGWEGRTAGVTCSF*SKLSKK Trigger: CTTCTTTGATAGTTTGCTTCAGAAACTACAGGTTAC...CCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | GACGGGTTGGGAAGGAAGGACAGCTGGGAAGGCTTTATTTGGTTCCTGTCACAGTTGATGGTCATAAGCTaGAGCATACGGGTACTTCCA | + |
Preference number: 4 (lower is better) Translates to: DGLGRKDSWEGFIWFLSQLMVIS*SIRVLP Trigger: TGGAAGTACCCGTATGCTGCAGCTTATGACCATCAA...CTGTGACAGGAACCAAATAAAGCCTTCCCAGCTGTCCTTCCTTCCCAACCCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAGCCAAGCCCAAGGATaGAGCTTGTTCCTGGATCAC | + |
Preference number: 4 (lower is better) Translates to: GRLYLVPVTGGRGKIQNESQAQG*SLFLDH Trigger: GTGATCCAGGAACAAGCTGCATCCTTGGGCTTGGCT...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | CCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACTGGTTCCGAATCTGCTCTaGGTTCTCACTGTTTGGATC | + |
Preference number: 4 (lower is better) Translates to: PVTGGRGKIQNEKSHKELVPNLL*VLTVWI Trigger: GATCCAAACAGTGAGAACCCAGAGCAGATTCGGAAC...CAGTTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | GTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAATTTTGTTCAGATCACTaGGACTCAGGCTGCCCAGAC | + |
Preference number: 4 (lower is better) Translates to: VPVTGGRGKIQNEKSHKEFCSDH*DSGCPD Trigger: GTCTGGGCAGCCTGAGTCCCAGTGATCTGAACAAAA...TTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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3UTR CAA 72 bp | GACGAAGGAAGATACCTTGATGTCATCTTGGTCCTCTaGGTCCTCAGGAGAGGACAGCTGAGCTTTAGCAGA | + |
Preference number: 4 (lower is better) Translates to: DEGRYLDVILVL*VLRRGQLSFSR Trigger: TCTGCTAAAGCTCAGCTGTCCTCTCCTGAGGACCAAGAGGACCAAGATGACATCAAGGTATCTTCCTTCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | GCCAGGTGGTCAATGAAGCCGTTGGTATCTGGTACGAGGAACAAGGGTCTGATCTACTTCGTTGAGCACTaGTCAAGGCATATTTCACTG | + |
Preference number: 4 (lower is better) Translates to: ARWSMKPLVSGTRNKGLIYFVEH*SRHISL Trigger: CAGTGAAATATGCCTTGATCAGTGCTCAACGAAGTA...GATCAGACCCTTGTTCCTCGTACCAGATACCAACGGCTTCATTGACCACCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAACTTCAAATAAACTCATaGGACTCTCCTTGGCAGTCA | + |
Preference number: 4 (lower is better) Translates to: GPSLRPMTAQKENKGKVQLQINS*DSPWQS Trigger: TGACTGCCAAGGAGAGTCTCATGAGTTTATTTGAAG...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | GTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACATATTTTCCACCCTTaGATGCCAGCAGAGGCTCTT | + |
Preference number: 4 (lower is better) Translates to: VPVTGGRGKIQNEKSHKEHIFHP*MPAEAL Trigger: AAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATG...TTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCAGCTGGTACTGCAAGTaGGGTAGCGATTCCTTCTCT | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSSWYCK*GSDSFS Trigger: AGAGAAGGAATCGCTACCGCACTTGCAGTACCAGCT...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGGTGTCATCCCCAACATaGCGGAAAGTAGACTTCTTT | + |
Preference number: 4 (lower is better) Translates to: APCPLFWVKKYNDKARNGVSSPT*RKVDFF Trigger: AAAGAAGTCTACTTTCCGGCATGTTGGGGATGACAC...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CCA 90 bp | GTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAAAGGCATGTGCAGCGCTaGACCAGTAGAGAAAACATA | + |
Preference number: 4 (lower is better) Translates to: VPVTGGRGKIQNEKSHKERHVQR*TSRENI Trigger: TATGTTTTCTCTACTGGTCCAGCGCTGCACATGCCT...TTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCATATCCACATTATCTTTaGCTGACCTCACCACAGGGG | + |
Preference number: 4 (lower is better) Translates to: KWDRKKKGILPFPIPQPPYPHYL*LTSPQG Trigger: CCCCTGTGGTGAGGTCAGTCAAAGATAATGTGGATA...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR TCA 90 bp | ACAGAGACTGTGCAGACTGAGGGGTTGATCAGTTTCCTTGCATCTAATGGAAACTTGGGAGCAATGTGCTaGGCCTTCAGATACCAACTG | + |
Preference number: 4 (lower is better) Translates to: TETVQTEGLISFLASNGNLGAMC*AFRYQL Trigger: CAGTTGGTATCTGAAGGCTCAGCACATTGCTCCCAA...GTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCCGAGAATGTGATGGATaGATCCAAATCTCCAGGCGA | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSRECDG*IQISRR Trigger: TCGCCTGGAGATTTGGATTCATCCATCACATTCTCG...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | TGTGATCCCCTGCTTAGCCTGAGACAGCCTTCTCAATCCTCCTCTACCTCTTTGTTTTTCGTAAAGGCTTaGTTCGAATGGCAAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: CDPLLSLRQPSQSSSTSLFFVKA*FEWQAH Trigger: ATGGGCTTGCCATTCGAAGCAAGCCTTTACGAAAAA...CAAAGAGGTAGAGGAGGATTGAGAAGGCTGTCTCAGGCTAAGCAGGGGATCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGGCTGTATCGTTGGCTTaGTCCCGATACCTAGAGATA | + |
Preference number: 4 (lower is better) Translates to: GRLYLVPVTGGRGKIQNEAVSLA*SRYLEI Trigger: TATCTCTAGGTATCGGGAGCAAGCCAACGATACAGC...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAACTCAGACTGATTGACTaGAGTCAGTATGTTACAGAA | + |
Preference number: 4 (lower is better) Translates to: GPSLRPMTAQKENKGKVQLRLID*SQYVTE Trigger: TTCTGTAACATACTGACTGCAGTCAATCAGTCTGAG...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR GCA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCTTTTCCACCCTTGAATaGCAGCAGAGGCTCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: SNGNFRISAPYHYRVAGSFSTLE*QQRLFL Trigger: CAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAA...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCACGGGTAGTAAGCCCCTaGATACATACCATTTGTAGG | + |
Preference number: 4 (lower is better) Translates to: KWDRKKKGILPFPIPQPPRVVSP*IHTICR Trigger: CCTACAAATGGTATGTATCCAGGGGCTTACTACCCG...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGGTTCCGAATCTGCTCTaGGTTCTCACTGTTTGGATC | + |
Preference number: 4 (lower is better) Translates to: GRLYLVPVTGGRGKIQNEVPNLL*VLTVWI Trigger: GATCCAAACAGTGAGAACCCAGAGCAGATTCGGAAC...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | CTTGTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCCTTCAAATAAACTCATaGGACTCTCCTTGGCAGTCA | + |
Preference number: 4 (lower is better) Translates to: LVFAVVQAAREDQVIVVTLQINS*DSPWQS Trigger: TGACTGCCAAGGAGAGTCTCATGAGTTTATTTGAAG...GGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCACCTTTTGCAGTCAGCTaGAATAACCTTATCCGAGGT | + |
Preference number: 4 (lower is better) Translates to: KWDRKKKGILPFPIPQPPPFAVS*NNLIRG Trigger: ACCTCGGATAAGGTTATTGCAGCTGACTGCAAAAGG...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | ACAGAGACTGTGCAGACTGAGGGGTTGATCAGTTTCCTTGCATCTAATGGAAACGTAAACAGCTTCCCATaGGCATGGAGAAAACTGAGG | + |
Preference number: 4 (lower is better) Translates to: TETVQTEGLISFLASNGNVNSFP*AWRKLR Trigger: CCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTAC...GTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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3UTR CAA 72 bp | CAGTCTTTCAACTGGGAGTTATGCACGGCAAACATGTaGATGGTCATAAGCTGCAGCATACGGGTACTTCCA | + |
Preference number: 4 (lower is better) Translates to: QSFNWELCTANM*MVISCSIRVLP Trigger: TGGAAGTACCCGTATGCTGCAGCTTATGACCATCAACATGTTTGCCGTGCATAACTCCCAGTTGAAAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | GTAAAGAAGTACAATGACAAAGCCAGAAACGGGCTCAACACCCTGGCACCTCTATACTTCGTTGAGCACTaGTCAAGGCATATTTCACTG | + |
Preference number: 4 (lower is better) Translates to: VKKYNDKARNGLNTLAPLYFVEH*SRHISL Trigger: CAGTGAAATATGCCTTGATCAGTGCTCAACGAAGTA...TAGAGGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | AGGAAATTTCCCCAAGAGGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATTTACTCATGGTTTCTaGATCAAAAGTGACACGAAG | + |
Preference number: 4 (lower is better) Translates to: RKFPQEGTAVKGRPRMGAFTHGF*IKSDTK Trigger: CTTCGTGTCACTTTTGATGCAGAAACCATGAGTAAA...TGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGAAATTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CCA 90 bp | ACAGAGACTGTGCAGACTGAGGGGTTGATCAGTTTCCTTGCATCTAATGGAAACTGCTGCAGCAATACTTaGAACTCCTTAAGGACCTTC | + |
Preference number: 4 (lower is better) Translates to: TETVQTEGLISFLASNGNCCSNT*NSLRTF Trigger: GAAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCA...GTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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3UTR CAA 72 bp | AGGGCTTCCAGAAAATACTTCAGCACTGTGACCCTTTaGCAGTCAGCTGCAATAACCTTATCCGAGGTTTTC | + |
Preference number: 4 (lower is better) Translates to: RASRKYFSTVTL*QSAAITLSEVF Trigger: GAAAACCTCGGATAAGGTTATTGCAGCTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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3UTR CAA 72 bp | ATATTTTCCACCCTTGAATGCCAGCAGAGGCTCTTCTaGTCCACAAAGGGCTTCCAGAAAATACTTCAGCAC | + |
Preference number: 4 (lower is better) Translates to: IFSTLECQQRLF*STKGFQKILQH Trigger: GTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCATGCTGGCTGCTAAACTaGGCATATAGTAATATACAG | + |
Preference number: 4 (lower is better) Translates to: KWDRKKKGILPFPIPQPPCWLLN*AYSNIQ Trigger: CTGTATATTACTATATGCGCAGTTTAGCAGCCAGCA...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | GACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATTGCTGGCTGCTAAACTaGGCATATAGTAATATACAG | + |
Preference number: 4 (lower is better) Translates to: DRKKKGILPFPIPQPPANCWLLN*AYSNIQ Trigger: CTGTATATTACTATATGCGCAGTTTAGCAGCCAGCA...ATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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3UTR CAA 72 bp | CAGACATTCAGGACAGAGACTGTGCAGACTGAGGGGTaGATCAGTTTCCTTGCATCTAATGGAAACTTTAGA | + |
Preference number: 4 (lower is better) Translates to: QTFRTETVQTEG*ISFLASNGNFR Trigger: TCTAAAGTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGTCCTGAATGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | GACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATTCAAATTCCTCATGCTaGTTCTTTTCCATCTGTTCA | + |
Preference number: 4 (lower is better) Translates to: DRKKKGILPFPIPQPPANSNSSC*FFSICS Trigger: TGAACAGATGGAAAAGAAGCAGCATGAGGAATTTGA...ATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR TCA 90 bp | TTTCAACTGGGAGTTATGCACGGCAAACATGTTGATGGTCATAAGCTGCAGCATCAAATCATACTTCGTTaGGCACTGATCAAGGCATAT | + |
Preference number: 4 (lower is better) Translates to: FQLGVMHGKHVDGHKLQHQIILR*ALIKAY Trigger: ATATGCCTTGATCAGTGCTCAACGAAGTATGATTTG...ATGCTGCAGCTTATGACCATCAACATGTTTGCCGTGCATAACTCCCAGTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR GCA 90 bp | GGAAGGCTTTATTTGGTTCCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGATATCAAATTCCTCATaGTGCTTCTTTTCCATCTGT | + |
Preference number: 4 (lower is better) Translates to: GRLYLVPVTGGRGKIQNEISNSS*CFFSIC Trigger: ACAGATGGAAAAGAAGCAGCATGAGGAATTTGATAT...CTCGTTCTGAATCTTACCCCTACCACCTGTGACAGGAACCAAATAAAGCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | TGCAGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGAGTCGTGGCCTCTCCTaGGCCCGATCCTGGCGCCGC | + |
Preference number: 5 (lower is better) Translates to: CSERKAKDGSMCWWRATQSRGLS*ARSWRR Trigger: GCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGACT...CTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | TGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGGCCCGCAGTCAGGATAGGGTaGCTGGCTGCTAAACTGCGC | + |
Preference number: 5 (lower is better) Translates to: CYTGRLAASQEWLHGGGPAVRIG*LAAKLR Trigger: GCGCAGTTTAGCAGCCAGCAACCCTATCCTGACTGC...GGGCCCACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACGCTCCCTCAGCACTGTaGTTGCTACCAGCTGAGCTG | + |
Preference number: 5 (lower is better) Translates to: QRGSTGHLGLREMETPGHAPSAL*LLPAEL Trigger: CAGCTCAGCTGGTAGCAACAACAGTGCTGAGGGAGC...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | AAAGATACCTGCTTCTTCAGTCGTGGCCTCTCCTTGGCCCGATCCTaGCGCCGCCGGCGACATCCATTATCGGTCAGGCCAGCTCCCTCA | + |
Preference number: 5 (lower is better) Translates to: KDTCFFSRGLSLARS*RRRRHPLSVRPAPS Trigger: TGAGGGAGCTGGCCTGACCGATAATGGATGTCGCCGGCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGACTGAAGAAGCAGGTATCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | ATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGCAGTCAGGATAGGGTaGCTGGCTGCTAAACTGCGC | + |
Preference number: 5 (lower is better) Translates to: IFRVTLGAWRPLRNGSMGAVRIG*LAAKLR Trigger: GCGCAGTTTAGCAGCCAGCAACCCTATCCTGACTGC...CCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CCA 90 bp | TTAGTTCCTTCATGTTTTCTCTGCTCCCGGCCTGCGGAGCCAGAGTaGCCAGGATCCCTCGCAGTTCCGATGCGGAGATCCGCACACGCT | + |
Preference number: 5 (lower is better) Translates to: LVPSCFLCSRPAEPE*PGSLAVPMRRSAHA Trigger: AGCGTGTGCGGATCTCCGCATCGGAACTGCGAGGGATCCTGGCCACTCTGGCTCCGCAGGCCGGGAGCAGAGAAAACATGAAGGAACTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | CAGTTGAGGACAAAGATACCTGCTTCTTCAGTCGTGGCCTCTCCTTaGCCCGATCCTGGCGCCGCCGGCGACATCCATTATCGGTCAGGC | + |
Preference number: 5 (lower is better) Translates to: QLRTKIPASSVVASP*PDPGAAGDIHYRSG Trigger: GCCTGACCGATAATGGATGTCGCCGGCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGACTGAAGAAGCAGGTATCTTTGTCCTCAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | GTGCTGATGCGGTCCCTGGAAAGCAGGTTGCTGAGCTGCAGTTCCTaGTTGTCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: VLMRSLESRLLSCSS*LSATRRSRWSSCCC Trigger: GCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGAACTGCAGCTCAGCAACCTGCTTTCCAGGGACCGCATCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | TCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTCATCATCTGGGTCCTaGTACAGTGGCACCTCAGAC | + |
Preference number: 5 (lower is better) Translates to: SSVLHWAPGGLSGMAPWGSSSGS*YSGTSD Trigger: GTCTGAGGTGCCACTGTACAAGGACCCAGATGATGA...CCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | CCAGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCCTCAGCACTGTTGTaGCTACCAGCTGAGCTGGTA | + |
Preference number: 5 (lower is better) Translates to: PVTSLLNLGSPGGSQQFPPSALL*LPAELV Trigger: TACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGGG...CGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGGGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCCTTACCCCCACTGCTaGGGCCTTTGTCAGACTTCA | + |
Preference number: 5 (lower is better) Translates to: RARAAVAVTDRSQRGSTGPYPHC*GLCQTS Trigger: TGAAGTCTGACAAAGGCCCAAGCAGTGGGGGTAAGG...CCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCGGCTTCTGGTCAGGATaGTTTGGGTCCCATAGTCGG | + |
Preference number: 5 (lower is better) Translates to: SHLPAKSWQPRRVPAVSAGFWSG*FGSHSR Trigger: CCGACTATGGGACCCAAACAATCCTGACCAGAAGCC...GGCGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGGGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGGTCATCTTGGTCCTCTaGGTCCTCAGGAGAGGACAG | + |
Preference number: 5 (lower is better) Translates to: RARAAVAVTDRSQRGSTGVILVL*VLRRGQ Trigger: CTGTCCTCTCCTGAGGACCAAGAGGACCAAGATGAC...CCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | ATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGCTCAGCTATCTTCCTaGCTAGAGCCAGCTTCTTGG | + |
Preference number: 5 (lower is better) Translates to: IFRVTLGAWRPLRNGSMGAQLSS*LEPASW Trigger: CCAAGAAGCTGGCTCTAGCAAGGAAGATAGCTGAGC...CCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | GGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGCATTTTCGGGCCTTTTCTaGCACCACACGGGCATAGCC | + |
Preference number: 5 (lower is better) Translates to: GEGCCCCYRQKSAWVHRAFSGLF*HHTGIA Trigger: GGCTATGCCCGTGTGGTGCAAGAAAAGGCCCGAAAA...TGCCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | GTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACCCTTCCTGATAGATTCAAGTTCATaGCCACGGCTGGTCAAGGCC | + |
Preference number: 5 (lower is better) Translates to: VHRASGPQGDGDTWAPFLIDSSS*PRLVKA Trigger: GGCCTTGACCAGCCGTGGCAATGAACTTGAATCTAT...CAGGAAGGGTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | CAGGCACGTGGACATCTTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAAAGGGCCATTTTGCTGTaGGCTGTCCAATTCCTTGCA | + |
Preference number: 5 (lower is better) Translates to: QARGHLPCYTGRLAASQERAILL*AVQFLA Trigger: TGCAAGGAATTGGACAGCCAACAGCAAAATGGCCCT...TTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAAGATGTCCACGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | CAGCGTGGGTCCACAGGGCATCTGGGCCTCAGGGAGATGGAGACACCTGGGCACATCTATAGGGCCATTTaGCTGTTGGCTGTCCAATTC | + |
Preference number: 5 (lower is better) Translates to: QRGSTGHLGLREMETPGHIYRAI*LLAVQF Trigger: GAATTGGACAGCCAACAGCAAAATGGCCCTATAGAT...GTGCCCAGGTGTCTCCATCTCCCTGAGGCCCAGATGCCCTGTGGACCCACGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AAGGCGATAGATTCAAGTTCATTGCCACGGCTGGTCAAGGCCCGCAGGCAGGAGAGCTGCAGTTCCTGGTaGTCAGCCACTCGGAGAAGC | + |
Preference number: 5 (lower is better) Translates to: KAIDSSSLPRLVKARRQESCSSW*SATRRS Trigger: GCTTCTCCGAGTGGCTGACAACCAGGAACTGCAGCT...CTCCTGCCTGCGGGCCTTGACCAGCCGTGGCAATGAACTTGAATCTATCGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS TCA 90 bp | TCAGGATACCACGACCACGATCTCGAAGTTCTTGTCTCGGGTGTCTaGGCTCCTGCTTCTCAGAGCCCTTACCCCCACTGCTTGGGCCTT | + |
Preference number: 5 (lower is better) Translates to: SGYHDHDLEVLVSGV*APASQSPYPHCLGL Trigger: AAGGCCCAAGCAGTGGGGGTAAGGGCTCTGAGAAGCAGGAGCTCAGACACCCGAGACAAGAACTTCGAGATCGTGGTCGTGGTATCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | GGCGACATCCATTATCGGTCAGGCCAGCTCCCTCAGCACTGTTGTTaGTACCAGCTGAGCTGGTACTGCAAGTGCGGTAGCGATTCCTTC | + |
Preference number: 5 (lower is better) Translates to: GDIHYRSGQLPQHCC*YQLSWYCKCGSDSF Trigger: GAAGGAATCGCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGGGAGCTGGCCTGACCGATAATGGATGTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | ACTCGGAGAAGCCGATGGAGCTCCTGTTGCTGCATGTTCCGCACGTaGTGTTCTATTTCCTCAGGACTCATGGTGCTAGCAGGGAGAGGG | + |
Preference number: 5 (lower is better) Translates to: TRRSRWSSCCCMFRT*CSISSGLMVLAGRG Trigger: CCCTCTCCCTGCTAGCACCATGAGTCCTGAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | GGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCTCGGGGTCTGGTCAGGATTGTTaGGGTCCCATAGTCGGCGGG | + |
Preference number: 5 (lower is better) Translates to: GNFRISAPYHYRVAGSSGSGQDC*GPIVGG Trigger: CCCGCCGACTATGGGACCCAAACAATCCTGACCAGA...CCCCGAGGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | CCAGCTAGGAGACTTCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGCTCATGAGACTCTCCTaGGCAGTCAGGATAGGGTTG | + |
Preference number: 5 (lower is better) Translates to: PARRLLRGVTGWEGRTAGLMRLS*AVRIGL Trigger: CAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAG...CCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS TCA 90 bp | TCCTTCCCAGACTCAGTGCCCTGGGCAGACCGAGAATGTGATGGATaGATCCAAATCTCCAGGCGAGTAGTGTCATCCCCAACATGCCGG | + |
Preference number: 5 (lower is better) Translates to: SFPDSVPWADRECDG*IQISRRVVSSPTCR Trigger: CCGGCATGTTGGGGATGACACTACTCGCCTGGAGATTTGGATTCATCCATCACATTCTCGGTCTGCCCAGGGCACTGAGTCTGGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 90 bp | TCCTGGTTGTCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTTGCTaGATGTTCCGCACGTGCTGTTCTATTTCCTCAGGACTCATGGTG | + |
Preference number: 5 (lower is better) Translates to: SWLSATRRSRWSSCC*MFRTCCSISSGLMV Trigger: CACCATGAGTCCTGAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CCA 90 bp | GCCCGGGTAGTAAGCCCCTGGATACATACCATTTGTAGGGCCTACTaGGTACTGCAGAGGGCTATAGCCTGCATAGGGATACTGAGAGGC | + |
Preference number: 5 (lower is better) Translates to: ARVVSPWIHTICRAY*VLQRAIACIGILRG Trigger: GCCTCTCAGTATCCCTATGCAGGCTATAGCCCTCTGCAGTACCCAGTAGGCCCTACAAATGGTATGTATCCAGGGGCTTACTACCCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | TTGCTGAGCTGCAGTTCCTGGTTGTCAGCCACTCGGAGAAGCCGATaGAGCTCCTGTTGCTGCATGTTCCGCACGTGCTGTTCTATTTCC | + |
Preference number: 5 (lower is better) Translates to: LLSCSSWLSATRRSR*SSCCCMFRTCCSIS Trigger: GGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGAACTGCAGCTCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | AGGGCGAGGGCTGCTGTTGCTGTTACAGACAGAAGTCAGCGTGGGTCCACAGGGGTTTTTCGTAAAGGCTaGCTTCGAATGGCAAGCCCA | + |
Preference number: 5 (lower is better) Translates to: RARAAVAVTDRSQRGSTGVFRKG*LRMASP Trigger: TGGGCTTGCCATTCGAAGCAAGCCTTTACGAAAAAC...CCCTGTGGACCCACGCTGACTTCTGTCTGTAACAGCAACAGCAGCCCTCGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | TTCCGTGTTACACTGGGCGCCTGGCGGCCTCTCAGGAATGGCTCCATGGGGGTGGCAAATCATACTTCGTaGAGCACTGATCAAGGCATA | + |
Preference number: 5 (lower is better) Translates to: FRVTLGAWRPLRNGSMGVANHTS*STDQGI Trigger: TATGCCTTGATCAGTGCTCAACGAAGTATGATTTGC...CACCCCCATGGAGCCATTCCTGAGAGGCCGCCAGGCGCCCAGTGTAACACGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | CCAGCTAGGAGACTTCTCAGAGGTGTGACGGGTTGGGAAGGAAGGACAGCTGGGTGCACGGCAAACATGTaGATGGTCATAAGCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: PARRLLRGVTGWEGRTAGCTANM*MVISCS Trigger: GCTGCAGCTTATGACCATCAACATGTTTGCCGTGCA...CCCAGCTGTCCTTCCTTCCCAACCCGTCACACCTCTGAGAAGTCTCCTAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACTGGTCAATGAAGCCGTaGGTATCTGGTACGAGGAAC | + |
Preference number: 5 (lower is better) Translates to: SERKAKDGSMCWWRATQDWSMKP*VSGTRN Trigger: GTTCCTCGTACCAGATACCAACGGCTTCATTGACCA...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | GGCCAGCTCCCTCAGCACTGTTGTTGCTACCAGCTGAGCTGGTACTaGAAGTGCGGTAGCGATTCCTTCTCTTGTCTGATCTCGAGTATC | + |
Preference number: 5 (lower is better) Translates to: GQLPQHCCCYQLSWY*KCGSDSFSCLISSI Trigger: GATACTCGAGATCAGACAAGAGAAGGAATCGCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGGGAGCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | CATACCATTTGTAGGGCCTACTGGGTACTGCAGAGGGCTATAGCCTaGATAGGGATACTGAGAGGCAGGGCCTGGTGTCCGAGGGTAATA | + |
Preference number: 5 (lower is better) Translates to: HTICRAYWVLQRAIA*IGILRGRAWCPRVI Trigger: TATTACCCTCGGACACCAGGCCCTGCCTCTCAGTATCCCTATGCAGGCTATAGCCCTCTGCAGTACCCAGTAGGCCCTACAAATGGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | AGTTCCTGGTTGTCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTTaGTGCATGTTCCGCACGTGCTGTTCTATTTCCTCAGGACTCATG | + |
Preference number: 5 (lower is better) Translates to: SSWLSATRRSRWSSC*CMFRTCCSISSGLM Trigger: CATGAGTCCTGAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACTCACTGTTTGGATCCTaGAGAAGCTGCCTGAACTTC | + |
Preference number: 5 (lower is better) Translates to: SERKAKDGSMCWWRATQDSLFGS*RSCLNF Trigger: GAAGTTCAGGCAGCTTCTCAAGGATCCAAACAGTGA...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | AGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCATGCTGCAGCAATACTaGGAACTCCTTAAGGACCTT | + |
Preference number: 5 (lower is better) Translates to: SHLPAKSWQPRRVPAVSAMLQQY*ELLKDL Trigger: AAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCAT...GGCGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGTCACCTCCCTGCTAAATCTTGGCAGCCCAGGAGGGTCCCAGCAGTTTCCGCCAGAAATCAGCTAGTGTaGACCAGACATCCACAGCAA | + |
Preference number: 5 (lower is better) Translates to: SHLPAKSWQPRRVPAVSARNQLV*TRHPQQ Trigger: TTGCTGTGGATGTCTGGTCAACACTAGCTGATTTCT...GGCGGAAACTGCTGGGACCCTCCTGGGCTGCCAAGATTTAGCAGGGAGGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | GGCCCTTCCCTTAGGCCCATGACTGCCCAAAAGGAAAACAAGGGCAAAGTGCAACAGCAGAGGCTCTTCTaGTCCACAAAGGGCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: GPSLRPMTAQKENKGKVQQQRLF*STKGFQ Trigger: CTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTG...TTGCACTTTGCCCTTGTTTTCCTTTTGGGCAGTCATGGGCCTAAGGGAAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCTCTGTCTCCTGCCCTTaGGCGAGGCCGTCCAGCTCA | + |
Preference number: 5 (lower is better) Translates to: SNGNFRISAPYHYRVAGSSVSCP*ARPSSS Trigger: TGAGCTGGACGGCCTCGCCAAAGGGCAGGAGACAGA...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 90 bp | CTCAGAATCCTTCCCAGACTCAGTGCCCTGGGCAGACCGAGAATGTaGTGGATGAATCCAAATCTCCAGGCGAGTAGTGTCATCCCCAAC | + |
Preference number: 5 (lower is better) Translates to: LRILPRLSALGRPRM*WMNPNLQASSVIPN Trigger: GTTGGGGATGACACTACTCGCCTGGAGATTTGGATTCATCCATCACATTCTCGGTCTGCCCAGGGCACTGAGTCTGGGAAGGATTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CCA 90 bp | GGTGTAGACTCCGGAGAACCTGATGAACTGACAGATAGGGCAGTGTaGGCAGGCAGAATCAGGATACCACGACCACGATCTCGAAGTTCT | + |
Preference number: 5 (lower is better) Translates to: GVDSGEPDELTDRAV*AGRIRIPRPRSRSS Trigger: AGAACTTCGAGATCGTGGTCGTGGTATCCTGATTCTGCCTGCCCACACTGCCCTATCTGTCAGTTCATCAGGTTCTCCGGAGTCTACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | TATACACTGCCAGTAGAGCCAACTGGTTATAGGGGCGCCCATTCTTaGGAGCAATGTGCTGAGCCTTCAGATACCAACTGCGAGCCTTCC | + |
Preference number: 5 (lower is better) Translates to: YTLPVEPTGYRGAHS*EQCAEPSDTNCEPS Trigger: GGAAGGCTCGCAGTTGGTATCTGAAGGCTCAGCACATTGCTCCCAAGAATGGGCGCCCCTATAACCAGTTGGCTCTACTGGCAGTGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACCTAGTCCAACAGTCTTaGGAAAAGTTTCCTGTGCCT | + |
Preference number: 5 (lower is better) Translates to: SERKAKDGSMCWWRATQDLVQQS*EKFPVP Trigger: AGGCACAGGAAACTTTTCCAAAGACTGTTGGACTAG...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | GACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCAATAGGCCGTCCAGCTCATaGATCACGATGAGGGGCACC | + |
Preference number: 5 (lower is better) Translates to: DRKKKGILPFPIPQPPANRPSSS*ITMRGT Trigger: GGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCT...ATTGGCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGCGGTTTTCTTTACCATaGCTTTTCTGTTCACCCTCA | + |
Preference number: 5 (lower is better) Translates to: PWHLYLGVQLSQLGDFSERFSLP*LFCSPS Trigger: TGAGGGTGAACAGAAAAGCAATGGTAAAGAAAACCG...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGTGAAAGGAAGGCCAAGGATGGGAGCATGTGCTGGTGGAGGGCCACTCAGGACGCAAATCATACTTCGTaGAGCACTGATCAAGGCATA | + |
Preference number: 5 (lower is better) Translates to: SERKAKDGSMCWWRATQDANHTS*STDQGI Trigger: TATGCCTTGATCAGTGCTCAACGAAGTATGATTTGC...GTCCTGAGTGGCCCTCCACCAGCACATGCTCCCATCCTTGGCCTTCCTTTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | TCTAATGGAAACTTTAGAATCTCTGCCCCTTACCACTACAGAGTGGCTGGGTCCGCTAGAGCCAGCTTCTaGGCCCGAAGTTCCCTGATG | + |
Preference number: 5 (lower is better) Translates to: SNGNFRISAPYHYRVAGSARASF*ARSSLM Trigger: CATCAGGGAACTTCGGGCCAAGAAGCTGGCTCTAGC...GGACCCAGCCACTCTGTAGTGGTAAGGGGCAGAGATTCTAAAGTTTCCATTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | CCCTGGCACCTCTACCTTGGGGTTCAGCTCTCCCAGCTAGGAGACTTCTCAGAGTGCAGGTCTGGTTTCTaGCTTCTTTTGATGATCTTT | + |
Preference number: 5 (lower is better) Translates to: PWHLYLGVQLSQLGDFSECRSGF*LLLMIF Trigger: AAAGATCATCAAAAGAAGCAAGAAACCAGACCTGCA...CTCTGAGAAGTCTCCTAGCTGGGAGAGCTGAACCCCAAGGTAGAGGTGCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | ACAGAGACTGTGCAGACTGAGGGGTTGATCAGTTTCCTTGCATCTAATGGAAACAGCTGCAGTTCCTGGTaGTCAGCCACTCGGAGAAGC | + |
Preference number: 5 (lower is better) Translates to: TETVQTEGLISFLASNGNSCSSW*SATRRS Trigger: GCTTCTCCGAGTGGCTGACAACCAGGAACTGCAGCT...GTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | CTTGTCTTTGCAGTAGTGCAGGCAGCAAGAGAGGATCAGGTCATCGTTGTTACCCTCATGAGACTCTCCTaGGCAGTCAGGATAGGGTTG | + |
Preference number: 5 (lower is better) Translates to: LVFAVVQAAREDQVIVVTLMRLS*AVRIGL Trigger: CAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAG...GGTAACAACGATGACCTGATCCTCTCTTGCTGCCTGCACTACTGCAAAGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCCCAAGGATGCAGCTaGTTCCTGGATCACAGAACG | + |
Preference number: 5 (lower is better) Translates to: KWDRKKKGILPFPIPQPPAQGCS*FLDHRT Trigger: CGTTCTGTGATCCAGGAACAAGCTGCATCCTTGGGC...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | CTCCCTCAGCACTGTTGTTGCTACCAGCTGAGCTGGTACTGCAAGTaGGGTAGCGATTCCTTCTCTTGTCTGATCTCGAGTATCTCTTTA | + |
Preference number: 5 (lower is better) Translates to: LPQHCCCYQLSWYCK*GSDSFSCLISSISL Trigger: TAAAGAGATACTCGAGATCAGACAAGAGAAGGAATCGCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | AAGTCACTGCCCTCATCTAAGAGCTCCAAGAGTCTGTTCCGAATCTaGTCTGGGTTCTCACTGTTTGGATCCTTGAGAAGCTGCCTGAAC | + |
Preference number: 5 (lower is better) Translates to: KSLPSSKSSKSLFRI*SGFSLFGSLRSCLN Trigger: GTTCAGGCAGCTTCTCAAGGATCCAAACAGTGAGAACCCAGAGCAGATTCGGAACAGACTCTTGGAGCTCTTAGATGAGGGCAGTGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CCA 90 bp | GGGAATGTCTCCATCCCAATCCGGGTAAACAGCTTCCCATGGGCATaGAGAAAACTGAGGATGAACCTTTTGTTCAGATCACTGGGACTC | + |
Preference number: 5 (lower is better) Translates to: GNVSIPIRVNSFPWA*RKLRMNLLFRSLGL Trigger: GAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | ATACGGGTACTTCCAATAGGAGATGGGCTATGCTGCAGCAATACTTaGAACTCCTTAAGGACCTTCTCAGCCACTGCAGGGAATGTCTCC | + |
Preference number: 5 (lower is better) Translates to: IRVLPIGDGLCCSNT*NSLRTFSATAGNVS Trigger: GGAGACATTCCCTGCAGTGGCTGAGAAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | CCTGTCACAGGTGGTAGGGGTAAGATTCAGAACGAGAAGTCCCACAAGGAACTGTTTCCCTTTTCTCCCTaGGCAGTTCTTACACGGTCA | + |
Preference number: 5 (lower is better) Translates to: PVTGGRGKIQNEKSHKELFPFSP*AVLTRS Trigger: TGACCGTGTAAGAACTGCCAAGGGAGAAAAGGGAAA...CAGTTCCTTGTGGGACTTCTCGTTCTGAATCTTACCCCTACCACCTGTGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGGAAATTTCCCCAAGAGGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCATCACTGTTTGGATCCTaGAGAAGCTGCCTGAACTTC | + |
Preference number: 5 (lower is better) Translates to: RKFPQEGTAVKGRPRMGASLFGS*RSCLNF Trigger: GAAGTTCAGGCAGCTTCTCAAGGATCCAAACAGTGA...TGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGAAATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS-3UTR CAA 90 bp | GTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCAGCGTTTTTCGTAAAGGCTaGCTTCGAATGGCAAGCCCA | + |
Preference number: 5 (lower is better) Translates to: VGQKEERYSSIPNPPTPSVFRKG*LRMASP Trigger: TGGGCTTGCCATTCGAAGCAAGCCTTTACGAAAAAC...GCTGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 90 bp | AATGTGCTGAGCCTTCAGATACCAACTGCGAGCCTTCCCATAGTTTaGTGTATCGTTGGCTTGCTCCCGATACCTAGAGATATCTCCTTG | + |
Preference number: 5 (lower is better) Translates to: NVLSLQIPTASLPIV*CIVGLLPIPRDISL Trigger: CAAGGAGATATCTCTAGGTATCGGGAGCAAGCCAACGATACAGCAAACTATGGGAAGGCTCGCAGTTGGTATCTGAAGGCTCAGCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 90 bp | ATAAGCTGCAGCATACGGGTACTTCCAATAGGAGATGGGCTATGCTaGAGCAATACTTGGAACTCCTTAAGGACCTTCTCAGCCACTGCA | + |
Preference number: 5 (lower is better) Translates to: ISCSIRVLPIGDGLC*SNTWNSLRTFSATA Trigger: TGCAGTGGCTGAGAAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTATGCTGCAGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | GTCATAAGCTGCAGCATACGGGTACTTCCAATAGGAGATGGGCTATaGTGCAGCAATACTTGGAACTCCTTAAGGACCTTCTCAGCCACT | + |
Preference number: 5 (lower is better) Translates to: VISCSIRVLPIGDGL*CSNTWNSLRTFSAT Trigger: AGTGGCTGAGAAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTATGCTGCAGCTTATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | ACTGCAGGGAATGTCTCCATCCCAATCCGGGTAAACAGCTTCCCATaGGCATGGAGAAAACTGAGGATGAACCTTTTGTTCAGATCACTG | + |
Preference number: 5 (lower is better) Translates to: TAGNVSIPIRVNSFP*AWRKLRMNLLFRSL Trigger: CAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCCCTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | GAGCTCCAAGAGTCTGTTCCGAATCTGCTCTGGGTTCTCACTGTTTaGATCCTTGAGAAGCTGCCTGAACTTCTCAATCACCTGATAGAA | + |
Preference number: 5 (lower is better) Translates to: ELQESVPNLLWVLTV*ILEKLPELLNHLIE Trigger: TTCTATCAGGTGATTGAGAAGTTCAGGCAGCTTCTCAAGGATCCAAACAGTGAGAACCCAGAGCAGATTCGGAACAGACTCTTGGAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CCA 90 bp | GTTGATGGTCATAAGCTGCAGCATACGGGTACTTCCAATAGGAGATaGGCTATGCTGCAGCAATACTTGGAACTCCTTAAGGACCTTCTC | + |
Preference number: 5 (lower is better) Translates to: VDGHKLQHTGTSNRR*AMLQQYLELLKDLL Trigger: GAGAAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTATGCTGCAGCTTATGACCATCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 90 bp | ACCAGTAGAGAAAACATAGCCAAGCCCAAGGATGCAGCTTGTTCCTaGATCACAGAACGACACTCCTCTGAGAAGCAGTCTTTTAGCTTC | + |
Preference number: 5 (lower is better) Translates to: TSRENIAKPKDAACS*ITERHSSEKQSFSF Trigger: GAAGCTAAAAGACTGCTTCTCAGAGGAGTGTCGTTCTGTGATCCAGGAACAAGCTGCATCCTTGGGCTTGGCTATGTTTTCTCTACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140197.3 |
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CDS-3UTR CAA 90 bp | GCCCCATGTCCCCTCTTCTGGGTAAAGAAGTACAATGACAAAGCCAGAAACGGGCATCTAAGGAATCAGTaGAGGACAAAGATACCTGCT | + |
Preference number: 5 (lower is better) Translates to: APCPLFWVKKYNDKARNGHLRNQ*RTKIPA Trigger: AGCAGGTATCTTTGTCCTCAACTGATTCCTTAGATG...CCCGTTTCTGGCTTTGTCATTGTACTTCTTTACCCAGAAGAGGGGACATGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AAGTGGGACAGAAAGAAGAAAGGTATTCTTCCATTCCCAATCCCCCAACCCCCACTGAGGATGAACCTTTaGTTCAGATCACTGGGACTC | + |
Preference number: 5 (lower is better) Translates to: KWDRKKKGILPFPIPQPPLRMNL*FRSLGL Trigger: GAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAG...TGGGGGTTGGGGGATTGGGAATGGAAGAATACCTTTCTTCTTTCTGTCCCACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | ACAGAGACTGTGCAGACTGAGGGGTTGATCAGTTTCCTTGCATCTAATGGAAACAGCACTGTGACCCTTTaGCAGTCAGCTGCAATAACC | + |
Preference number: 5 (lower is better) Translates to: TETVQTEGLISFLASNGNSTVTL*QSAAIT Trigger: GGTTATTGCAGCTGACTGCAAAAGGGTCACAGTGCT...GTTTCCATTAGATGCAAGGAAACTGATCAACCCCTCAGTCTGCACAGTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | GTAAAGAAGTACAATGACAAAGCCAGAAACGGGCTCAACACCCTGGCACCTCTAACATATTTTCCACCCTaGAATGCCAGCAGAGGCTCT | + |
Preference number: 5 (lower is better) Translates to: VKKYNDKARNGLNTLAPLTYFPP*NASRGS Trigger: AGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATGT...TAGAGGTGCCAGGGTGTTGAGCCCGTTTCTGGCTTTGTCATTGTACTTCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS-3UTR CAA 90 bp | AGGAAATTTCCCCAAGAGGGTACTGCAGTGAAAGGAAGGCCAAGGATGGGAGCAGGTTTCTTGCTTCTTTaGATGATCTTTAGACTTCGG | + |
Preference number: 5 (lower is better) Translates to: RKFPQEGTAVKGRPRMGAGFLLL*MIFRLR Trigger: CCGAAGTCTAAAGATCATCAAAAGAAGCAAGAAACC...TGCTCCCATCCTTGGCCTTCCTTTCACTGCAGTACCCTCTTGGGGAAATTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 90 bp | CACTGCTTGGGCCTTTGTCAGACTTCATTCTATCCACATTATCTTTaGCTGACCTCACCACAGGGGAGTCTTTACTCATGGTTTCTGCAT | + |
Preference number: 5 (lower is better) Translates to: HCLGLCQTSFYPHYL*LTSPQGSLYSWFLH Trigger: ATGCAGAAACCATGAGTAAAGACTCCCCTGTGGTGAGGTCAGTCAAAGATAATGTGGATAGAATGAAGTCTGACAAAGGCCCAAGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 90 bp | GCTTGGGCCTTTGTCAGACTTCATTCTATCCACATTATCTTTGACTaGCCTCACCACAGGGGAGTCTTTACTCATGGTTTCTGCATCAAA | + |
Preference number: 5 (lower is better) Translates to: AWAFVRLHSIHIIFD*PHHRGVFTHGFCIK Trigger: TTTGATGCAGAAACCATGAGTAAAGACTCCCCTGTGGTGAGGTCAGTCAAAGATAATGTGGATAGAATGAAGTCTGACAAAGGCCCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 90 bp | CAAGATGTAGGGCTAATTTCATCATCAGTGTCCAAGAAATGTAGCTaGGGTGTCTGGCTTTTTAGGGCAGGCTTCTGGTCAGGATTGTTT | + |
Preference number: 5 (lower is better) Translates to: QDVGLISSSVSKKCS*GVWLFRAGFWSGLF Trigger: AAACAATCCTGACCAGAAGCCTGCCCTAAAAAGCCAGACACCTCAGCTACATTTCTTGGACACTGATGATGAAATTAGCCCTACATCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 90 bp | AAAGTCCAGGCTTATAGATTTCCAAATCTGGACGCCTATTATCTTTaGGCTGTCTGGGTTCCTTTAGTTCCTTCATGTTTTCTCTGCTCC | + |
Preference number: 5 (lower is better) Translates to: KVQAYRFPNLDAYYL*AVWVPLVPSCFLCS Trigger: GGAGCAGAGAAAACATGAAGGAACTAAAGGAACCCAGACAGCGCAAAGATAATAGGCGTCCAGATTTGGAAATCTATAAGCCTGGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 90 bp | TCTATAGGGCCATTTTGCTGTTGGCTGTCCAATTCCTTGCAAACTTaGATAAGCTGTGTATCATTCCCAACAGCAGAAGAATCTCTGTCA | + |
Preference number: 5 (lower is better) Translates to: SIGPFCCWLSNSLQT*ISCVSFPTAEESLS Trigger: TGACAGAGATTCTTCTGCTGTTGGGAATGATACACAGCTTATTCAAGTTTGCAAGGAATTGGACAGCCAACAGCAAAATGGCCCTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 90 bp | TGCTCCCGATACCTAGAGATATCTCCTTGGCAAATCATACTTCGTTaGGCACTGATCAAGGCATATTTCACTGTTTTTCGTAAAGGCTTG | + |
Preference number: 5 (lower is better) Translates to: CSRYLEISPWQIILR*ALIKAYFTVFRKGL Trigger: CAAGCCTTTACGAAAAACAGTGAAATATGCCTTGATCAGTGCTCAACGAAGTATGATTTGCCAAGGAGATATCTCTAGGTATCGGGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 90 bp | TTCTTTCCTTTTCGCCACTTATCAGGGCTCATATCAAATTCCTCATaGTGCTTCTTTTCCATCTGTTCAGCCTTTCGTTTAGTCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: FFPFRHLSGLISNSS*CFFSICSAFRLVSS Trigger: TGAAGAGACTAAACGAAAGGCTGAACAGATGGAAAAGAAGCAGCATGAGGAATTTGATATGAGCCCTGATAAGTGGCGAAAAGGAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 90 bp | TTTCCTTTTCGCCACTTATCAGGGCTCATATCAAATTCCTCATGCTaGTTCTTTTCCATCTGTTCAGCCTTTCGTTTAGTCTCTTCAAAT | + |
Preference number: 5 (lower is better) Translates to: FPFRHLSGLISNSSC*FFSICSAFRLVSSN Trigger: ATTTGAAGAGACTAAACGAAAGGCTGAACAGATGGAAAAGAAGCAGCATGAGGAATTTGATATGAGCCCTGATAAGTGGCGAAAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | CGGAGCCAGAGTGGCCAGGATCCCTCGCAGTTCCGATaGGGAGATCCGCACACGCTCCAACCCCTCCGCCAT | + |
Preference number: 6 (lower is better) Translates to: RSQSGQDPSQFR*GDPHTLQPLRH Trigger: ATGGCGGAGGGGTTGGAGCGTGTGCGGATCTCCGCATCGGAACTGCGAGGGATCCTGGCCACTCTGGCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | TGCTTCTTCAGTCGTGGCCTCTCCTTGGCCCGATCCTaGCGCCGCCGGCGACATCCATTATCGGTCAGGCCA | + |
Preference number: 6 (lower is better) Translates to: CFFSRGLSLARS*RRRRHPLSVRP Trigger: TGGCCTGACCGATAATGGATGTCGCCGGCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGACTGAAGAAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | TCATGTTTTCTCTGCTCCCGGCCTGCGGAGCCAGAGTaGCCAGGATCCCTCGCAGTTCCGATGCGGAGATCC | + |
Preference number: 6 (lower is better) Translates to: SCFLCSRPAEPE*PGSLAVPMRRS Trigger: GGATCTCCGCATCGGAACTGCGAGGGATCCTGGCCACTCTGGCTCCGCAGGCCGGGAGCAGAGAAAACATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | CGGTCCCTGGAAAGCAGGTTGCTGAGCTGCAGTTCCTaGTTGTCAGCCACTCGGAGAAGCCGATGGAGCTCC | + |
Preference number: 6 (lower is better) Translates to: RSLESRLLSCSS*LSATRRSRWSS Trigger: GGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGAACTGCAGCTCAGCAACCTGCTTTCCAGGGACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | TGTAGGGCCTACTGGGTACTGCAGAGGGCTATAGCCTaGATAGGGATACTGAGAGGCAGGGCCTGGTGTCCG | + |
Preference number: 6 (lower is better) Translates to: CRAYWVLQRAIA*IGILRGRAWCP Trigger: CGGACACCAGGCCCTGCCTCTCAGTATCCCTATGCAGGCTATAGCCCTCTGCAGTACCCAGTAGGCCCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | GACAAAGATACCTGCTTCTTCAGTCGTGGCCTCTCCTaGGCCCGATCCTGGCGCCGCCGGCGACATCCATTA | + |
Preference number: 6 (lower is better) Translates to: DKDTCFFSRGLS*ARSWRRRRHPL Trigger: TAATGGATGTCGCCGGCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGACTGAAGAAGCAGGTATCTTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 90 bp | TCAGTTGAGGACAAAGATACCTGCTTCTTCAGTCGTGGCCTCTCCTaGGCCCGATCCTGGCGCCGCCGGCGACATCCATTATCGGTCAGG | + |
Preference number: 6 (lower is better) Translates to: SVEDKDTCFFSRGLS*ARSWRRRRHPLSVR Trigger: CCTGACCGATAATGGATGTCGCCGGCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGACTGAAGAAGCAGGTATCTTTGTCCTCAACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 90 bp | CTGATGCGGTCCCTGGAAAGCAGGTTGCTGAGCTGCAGTTCCTGGTaGTCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTTGCTGCATG | + |
Preference number: 6 (lower is better) Translates to: LMRSLESRLLSCSSW*SATRRSRWSSCCCM Trigger: CATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGAACTGCAGCTCAGCAACCTGCTTTCCAGGGACCGCATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CAA 90 bp | GTGGGCAGGCAGAATCAGGATACCACGACCACGATCTCGAAGTTCTaGTCTCGGGTGTCTGAGCTCCTGCTTCTCAGAGCCCTTACCCCC | + |
Preference number: 6 (lower is better) Translates to: VGRQNQDTTTTISKF*SRVSELLLLRALTP Trigger: GGGGGTAAGGGCTCTGAGAAGCAGGAGCTCAGACACCCGAGACAAGAACTTCGAGATCGTGGTCGTGGTATCCTGATTCTGCCTGCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | ACAAAGATACCTGCTTCTTCAGTCGTGGCCTCTCCTTaGCCCGATCCTGGCGCCGCCGGCGACATCCATTAT | + |
Preference number: 6 (lower is better) Translates to: TKIPASSVVASP*PDPGAAGDIHY Trigger: ATAATGGATGTCGCCGGCGGCGCCAGGATCGGGCCAAGGAGAGGCCACGACTGAAGAAGCAGGTATCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | TGCAGTTCCTGGTTGTCAGCCACTCGGAGAAGCCGATaGAGCTCCTGTTGCTGCATGTTCCGCACGTGCTGT | + |
Preference number: 6 (lower is better) Translates to: CSSWLSATRRSR*SSCCCMFRTCC Trigger: ACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGAACTGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | CATTATCGGTCAGGCCAGCTCCCTCAGCACTGTTGTTaGTACCAGCTGAGCTGGTACTGCAAGTGCGGTAGC | + |
Preference number: 6 (lower is better) Translates to: HYRSGQLPQHCC*YQLSWYCKCGS Trigger: GCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGGGAGCTGGCCTGACCGATAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | GGTGTCTGGCTTTTTAGGGCAGGCTTCTGGTCAGGATaGTTTGGGTCCCATAGTCGGCGGGTAGTGCCTCCA | + |
Preference number: 6 (lower is better) Translates to: GVWLFRAGFWSG*FGSHSRRVVPP Trigger: TGGAGGCACTACCCGCCGACTATGGGACCCAAACAATCCTGACCAGAAGCCTGCCCTAAAAAGCCAGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | TCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTTGCTaGATGTTCCGCACGTGCTGTTCTATTTCCTCAGGA | + |
Preference number: 6 (lower is better) Translates to: SATRRSRWSSCC*MFRTCCSISSG Trigger: TCCTGAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CAA 72 bp | GTTGTCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTaGCTGCATGTTCCGCACGTGCTGTTCTATTTCCTC | + |
Preference number: 6 (lower is better) Translates to: VVSHSEKPMELL*LHVPHVLFYFL Trigger: GAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CAA 90 bp | CAGTTCCTGGTTGTCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTaGCTGCATGTTCCGCACGTGCTGTTCTATTTCCTCAGGACTCAT | + |
Preference number: 6 (lower is better) Translates to: QFLVVSHSEKPMELL*LHVPHVLFYFLRTH Trigger: ATGAGTCCTGAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAACCAGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS TCA 72 bp | GACTCAGTGCCCTGGGCAGACCGAGAATGTGATGGATaGATCCAAATCTCCAGGCGAGTAGTGTCATCCCCA | + |
Preference number: 6 (lower is better) Translates to: DSVPWADRECDG*IQISRRVVSSP Trigger: TGGGGATGACACTACTCGCCTGGAGATTTGGATTCATCCATCACATTCTCGGTCTGCCCAGGGCACTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS TCA 72 bp | CTTCCCAGACTCAGTGCCCTGGGCAGACCGAGAATGTaGTGGATGAATCCAAATCTCCAGGCGAGTAGTGTC | + |
Preference number: 6 (lower is better) Translates to: LPRLSALGRPRM*WMNPNLQASSV Trigger: GACACTACTCGCCTGGAGATTTGGATTCATCCATCACATTCTCGGTCTGCCCAGGGCACTGAGTCTGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | AGCCGATGGAGCTCCTGTTGCTGCATGTTCCGCACGTaGTGTTCTATTTCCTCAGGACTCATGGTGCTAGCA | + |
Preference number: 6 (lower is better) Translates to: SRWSSCCCMFRT*CSISSGLMVLA Trigger: TGCTAGCACCATGAGTCCTGAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | TTGTCAGCCACTCGGAGAAGCCGATGGAGCTCCTGTTaGTGCATGTTCCGCACGTGCTGTTCTATTTCCTCA | + |
Preference number: 6 (lower is better) Translates to: LSATRRSRWSSC*CMFRTCCSISS Trigger: TGAGGAAATAGAACAGCACGTGCGGAACATGCAGCAACAGGAGCTCCATCGGCTTCTCCGAGTGGCTGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | GACCATTCTCCTGCTCAGAATCCTTCCCAGACTCAGTaGCCTGGGCAGACCGAGAATGTGATGGATGAATCC | + |
Preference number: 6 (lower is better) Translates to: DHSPAQNPSQTQ*PGQTENVMDES Trigger: GGATTCATCCATCACATTCTCGGTCTGCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAGGAGAATGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CCA 72 bp | CAGCTCCCTCAGCACTGTTGTTGCTACCAGCTGAGCTaGTACTGCAAGTGCGGTAGCGATTCCTTCTCTTGT | + |
Preference number: 6 (lower is better) Translates to: QLPQHCCCYQLS*YCKCGSDSFSC Trigger: ACAAGAGAAGGAATCGCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGGGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | TCCGGAGAACCTGATGAACTGACAGATAGGGCAGTGTaGGCAGGCAGAATCAGGATACCACGACCACGATCT | + |
Preference number: 6 (lower is better) Translates to: SGEPDELTDRAV*AGRIRIPRPRS Trigger: AGATCGTGGTCGTGGTATCCTGATTCTGCCTGCCCACACTGCCCTATCTGTCAGTTCATCAGGTTCTCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | CAGAATCAGGATACCACGACCACGATCTCGAAGTTCTaGTCTCGGGTGTCTGAGCTCCTGCTTCTCAGAGCC | + |
Preference number: 6 (lower is better) Translates to: QNQDTTTTISKF*SRVSELLLLRA Trigger: GGCTCTGAGAAGCAGGAGCTCAGACACCCGAGACAAGAACTTCGAGATCGTGGTCGTGGTATCCTGATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 72 bp | TTGGTTGAGGATCTCTTCTTCATCTGCCCTGCCTGCTaGCTCTTTGGTAATGGTCTGCAACCGCCTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: LVEDLFFICPAC*LFGNGLQPPSR Trigger: CCTGGAAGGCGGTTGCAGACCATTACCAAAGAGTCAGCAGGCAGGGCAGATGAAGAAGAGATCCTCAACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | CCTCAGCACTGTTGTTGCTACCAGCTGAGCTGGTACTaGAAGTGCGGTAGCGATTCCTTCTCTTGTCTGATC | + |
Preference number: 6 (lower is better) Translates to: PQHCCCYQLSWY*KCGSDSFSCLI Trigger: GATCAGACAAGAGAAGGAATCGCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCAACAACAGTGCTGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 90 bp | CTGAGCTCCTGCTTCTCAGAGCCCTTACCCCCACTGCTTGGGCCTTaGTCAGACTTCATTCTATCCACATTATCTTTGACTGACCTCACC | + |
Preference number: 6 (lower is better) Translates to: LSSCFSEPLPPLLGP*SDFILSTLSLTDLT Trigger: GGTGAGGTCAGTCAAAGATAATGTGGATAGAATGAAGTCTGACAAAGGCCCAAGCAGTGGGGGTAAGGGCTCTGAGAAGCAGGAGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | CACTGTTGTTGCTACCAGCTGAGCTGGTACTGCAAGTaGGGTAGCGATTCCTTCTCTTGTCTGATCTCGAGT | + |
Preference number: 6 (lower is better) Translates to: HCCCYQLSWYCK*GSDSFSCLISS Trigger: ACTCGAGATCAGACAAGAGAAGGAATCGCTACCGCACTTGCAGTACCAGCTCAGCTGGTAGCAACAACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | GCTATAGCCTGCATAGGGATACTGAGAGGCAGGGCCTaGTGTCCGAGGGTAATAATAGGGGTTATCAGAGTT | + |
Preference number: 6 (lower is better) Translates to: AIACIGILRGRA*CPRVIIGVIRV Trigger: AACTCTGATAACCCCTATTATTACCCTCGGACACCAGGCCCTGCCTCTCAGTATCCCTATGCAGGCTATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 90 bp | TCTCCCTTACACTCATCCTCCTCTATCCTCAACTGCTCCACTTGGTaGAGGATCTCTTCTTCATCTGCCCTGCCTGCTGACTCTTTGGTA | + |
Preference number: 6 (lower is better) Translates to: SPLHSSSSILNCSTW*RISSSSALPADSLV Trigger: TACCAAAGAGTCAGCAGGCAGGGCAGATGAAGAAGAGATCCTCAACCAAGTGGAGCAGTTGAGGATAGAGGAGGATGAGTGTAAGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 72 bp | GGTACTGCAAGTGCGGTAGCGATTCCTTCTCTTGTCTaGTCTCGAGTATCTCTTTACAGAGCCAGGCTTTCC | + |
Preference number: 6 (lower is better) Translates to: GTASAVAIPSLV*SRVSLYRARLS Trigger: GGAAAGCCTGGCTCTGTAAAGAGATACTCGAGATCAGACAAGAGAAGGAATCGCTACCGCACTTGCAGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | GCTTCTCCCTTACACTCATCCTCCTCTATCCTCAACTaGTCCACTTGGTTGAGGATCTCTTCTTCATCTGCC | + |
Preference number: 6 (lower is better) Translates to: ASPLHSSSSILN*STWLRISSSSA Trigger: GGCAGATGAAGAAGAGATCCTCAACCAAGTGGAGCAGTTGAGGATAGAGGAGGATGAGTGTAAGGGAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | CCCTCATCTAAGAGCTCCAAGAGTCTGTTCCGAATCTaGTCTGGGTTCTCACTGTTTGGATCCTTGAGAAGC | + |
Preference number: 6 (lower is better) Translates to: PSSKSSKSLFRI*SGFSLFGSLRS Trigger: GCTTCTCAAGGATCCAAACAGTGAGAACCCAGAGCAGATTCGGAACAGACTCTTGGAGCTCTTAGATGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | AGCCTTCAGATACCAACTGCGAGCCTTCCCATAGTTTaGTGTATCGTTGGCTTGCTCCCGATACCTAGAGAT | + |
Preference number: 6 (lower is better) Translates to: SLQIPTASLPIV*CIVGLLPIPRD Trigger: ATCTCTAGGTATCGGGAGCAAGCCAACGATACAGCAAACTATGGGAAGGCTCGCAGTTGGTATCTGAAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | TCTTGGGAGCAATGTGCTGAGCCTTCAGATACCAACTaGGAGCCTTCCCATAGTTTGCTGTATCGTTGGCTT | + |
Preference number: 6 (lower is better) Translates to: SWEQCAEPSDTN*EPSHSLLYRWL Trigger: AAGCCAACGATACAGCAAACTATGGGAAGGCTCGCAGTTGGTATCTGAAGGCTCAGCACATTGCTCCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | CAATACTTGGAACTCCTTAAGGACCTTCTCAGCCACTaGAGGGAATGTCTCCATCCCAATCCGGGTAAACAG | + |
Preference number: 6 (lower is better) Translates to: QYLELLKDLLSH*RECLHPNPGKQ Trigger: CTGTTTACCCGGATTGGGATGGAGACATTCCCTGCAGTGGCTGAGAAGGTCCTTAAGGAGTTCCAAGTATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 90 bp | CTAGGACATCAGGCTCATCAACTCTGTCCTCATCTAAGGAATCAGTaGAGGACAAAGATACCTGCTTCTTCAGTCGTGGCCTCTCCTTGG | + |
Preference number: 6 (lower is better) Translates to: LGHQAHQLCPHLRNQ*RTKIPASSVVASPW Trigger: CCAAGGAGAGGCCACGACTGAAGAAGCAGGTATCTTTGTCCTCAACTGATTCCTTAGATGAGGACAGAGTTGATGAGCCTGATGTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | CAGGCTCATCAACTCTGTCCTCATCTAAGGAATCAGTaGAGGACAAAGATACCTGCTTCTTCAGTCGTGGCC | + |
Preference number: 6 (lower is better) Translates to: QAHQLCPHLRNQ*RTKIPASSVVA Trigger: GGCCACGACTGAAGAAGCAGGTATCTTTGTCCTCAACTGATTCCTTAGATGAGGACAGAGTTGATGAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | ACTGCGAGCCTTCCCATAGTTTGCTGTATCGTTGGCTaGCTCCCGATACCTAGAGATATCTCCTTGGCAAAT | + |
Preference number: 6 (lower is better) Translates to: TASLPIVCCIVG*LPIPRDISLAN Trigger: ATTTGCCAAGGAGATATCTCTAGGTATCGGGAGCAAGCCAACGATACAGCAAACTATGGGAAGGCTCGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CAA 90 bp | CAGATACCAACTGCGAGCCTTCCCATAGTTTGCTGTATCGTTGGCTaGCTCCCGATACCTAGAGATATCTCCTTGGCAAATCATACTTCG | + |
Preference number: 6 (lower is better) Translates to: QIPTASLPIVCCIVG*LPIPRDISLANHTS Trigger: CGAAGTATGATTTGCCAAGGAGATATCTCTAGGTATCGGGAGCAAGCCAACGATACAGCAAACTATGGGAAGGCTCGCAGTTGGTATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CAA 90 bp | CCACTGCTTGGGCCTTTGTCAGACTTCATTCTATCCACATTATCTTaGACTGACCTCACCACAGGGGAGTCTTTACTCATGGTTTCTGCA | + |
Preference number: 6 (lower is better) Translates to: PLLGPLSDFILSTLS*TDLTTGESLLMVSA Trigger: TGCAGAAACCATGAGTAAAGACTCCCCTGTGGTGAGGTCAGTCAAAGATAATGTGGATAGAATGAAGTCTGACAAAGGCCCAAGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 72 bp | GGGCTAATTTCATCATCAGTGTCCAAGAAATGTAGCTaGGGTGTCTGGCTTTTTAGGGCAGGCTTCTGGTCA | + |
Preference number: 6 (lower is better) Translates to: GLISSSVSKKCS*GVWLFRAGFWS Trigger: TGACCAGAAGCCTGCCCTAAAAAGCCAGACACCTCAGCTACATTTCTTGGACACTGATGATGAAATTAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | ATCCAAATCTCCAGGCGAGTAGTGTCATCCCCAACATaGCGGAAAGTAGACTTCTTTCCTTTTCGCCACTTA | + |
Preference number: 6 (lower is better) Translates to: IQISRRVVSSPT*RKVDFFPFRHL Trigger: TAAGTGGCGAAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGGGATGACACTACTCGCCTGGAGATTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | AGCATACGGGTACTTCCAATAGGAGATGGGCTATGCTaGAGCAATACTTGGAACTCCTTAAGGACCTTCTCA | + |
Preference number: 6 (lower is better) Translates to: SIRVLPIGDGLC*SNTWNSLRTFS Trigger: TGAGAAGGTCCTTAAGGAGTTCCAAGTATTGCTGCAGCATAGCCCATCTCCTATTGGAAGTACCCGTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CCA 72 bp | TCCATCCCAATCCGGGTAAACAGCTTCCCATGGGCATaGAGAAAACTGAGGATGAACCTTTTGTTCAGATCA | + |
Preference number: 6 (lower is better) Translates to: SIPIRVNSFPWA*RKLRMNLLFRS Trigger: TGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | AAAGTGACACGAAGGGCACTTCGGTTTTCTTTACCATaGCTTTTCTGTTCACCCTCACCACAGCCAGACCAA | + |
Preference number: 6 (lower is better) Translates to: KVTRRALRFSLP*LFCSPSPQPDQ Trigger: TTGGTCTGGCTGTGGTGAGGGTGAACAGAAAAGCAATGGTAAAGAAAACCGAAGTGCCCTTCGTGTCACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | ATCGTTGGCTTGCTCCCGATACCTAGAGATATCTCCTaGGCAAATCATACTTCGTTGAGCACTGATCAAGGC | + |
Preference number: 6 (lower is better) Translates to: IVGLLPIPRDIS*ANHTSLSTDQG Trigger: GCCTTGATCAGTGCTCAACGAAGTATGATTTGCCAAGGAGATATCTCTAGGTATCGGGAGCAAGCCAACGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS TCA 72 bp | GGCCTTTGTCAGACTTCATTCTATCCACATTATCTTTaGCTGACCTCACCACAGGGGAGTCTTTACTCATGG | + |
Preference number: 6 (lower is better) Translates to: GLCQTSFYPHYL*LTSPQGSLYSW Trigger: CCATGAGTAAAGACTCCCCTGTGGTGAGGTCAGTCAAAGATAATGTGGATAGAATGAAGTCTGACAAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 72 bp | GGGCCTTTGTCAGACTTCATTCTATCCACATTATCTTaGACTGACCTCACCACAGGGGAGTCTTTACTCATG | + |
Preference number: 6 (lower is better) Translates to: GPLSDFILSTLS*TDLTTGESLLM Trigger: CATGAGTAAAGACTCCCCTGTGGTGAGGTCAGTCAAAGATAATGTGGATAGAATGAAGTCTGACAAAGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS CAA 90 bp | GTTTGCTGTATCGTTGGCTTGCTCCCGATACCTAGAGATATCTCCTaGGCAAATCATACTTCGTTGAGCACTGATCAAGGCATATTTCAC | + |
Preference number: 6 (lower is better) Translates to: VCCIVGLLPIPRDIS*ANHTSLSTDQGIFH Trigger: GTGAAATATGCCTTGATCAGTGCTCAACGAAGTATGATTTGCCAAGGAGATATCTCTAGGTATCGGGAGCAAGCCAACGATACAGCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS GCA 72 bp | CGCCACTTATCAGGGCTCATATCAAATTCCTCATGCTaGTTCTTTTCCATCTGTTCAGCCTTTCGTTTAGTC | + |
Preference number: 6 (lower is better) Translates to: RHLSGLISNSSC*FFSICSAFRLV Trigger: GACTAAACGAAAGGCTGAACAGATGGAAAAGAAGCAGCATGAGGAATTTGATATGAGCCCTGATAAGTGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CAA 72 bp | CTGTGCCTGACTATTTTCTGCATCTATAGGGCCATTTaGCTGTTGGCTGTCCAATTCCTTGCAAACTTGAAT | + |
Preference number: 6 (lower is better) Translates to: LCLTIFCIYRAI*LLAVQFLANLN Trigger: ATTCAAGTTTGCAAGGAATTGGACAGCCAACAGCAAAATGGCCCTATAGATGCAGAAAATAGTCAGGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 72 bp | CCATTTTGCTGTTGGCTGTCCAATTCCTTGCAAACTTaGATAAGCTGTGTATCATTCCCAACAGCAGAAGAA | + |
Preference number: 6 (lower is better) Translates to: PFCCWLSNSLQT*ISCVSFPTAEE Trigger: TTCTTCTGCTGTTGGGAATGATACACAGCTTATTCAAGTTTGCAAGGAATTGGACAGCCAACAGCAAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | TTTCGCCACTTATCAGGGCTCATATCAAATTCCTCATaGTGCTTCTTTTCCATCTGTTCAGCCTTTCGTTTA | + |
Preference number: 6 (lower is better) Translates to: FRHLSGLISNSS*CFFSICSAFRL Trigger: TAAACGAAAGGCTGAACAGATGGAAAAGAAGCAGCATGAGGAATTTGATATGAGCCCTGATAAGTGGCGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS TCA 72 bp | GTTTTGAAATTTATAGTAAGATGCTTGGGCCTGACGTaGATCACCCCAAGATGTAGGGCTAATTTCATCATC | + |
Preference number: 6 (lower is better) Translates to: VLKFIVRCLGLT*ITPRCRANFII Trigger: GATGATGAAATTAGCCCTACATCTTGGGGTGATTCACGTCAGGCCCAAGCATCTTACTATAAATTTCAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | GCTTATAGATTTCCAAATCTGGACGCCTATTATCTTTaGGCTGTCTGGGTTCCTTTAGTTCCTTCATGTTTT | + |
Preference number: 6 (lower is better) Translates to: AYRFPNLDAYYL*AVWVPLVPSCF Trigger: AAAACATGAAGGAACTAAAGGAACCCAGACAGCGCAAAGATAATAGGCGTCCAGATTTGGAAATCTATAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS GCA 72 bp | TCTCCCTTGGCAGTTCTTACACGGTCATTACTTTGGTaGTTTTCTATCTCGGTTTTATCCGGTTTGTTATTA | + |
Preference number: 6 (lower is better) Translates to: SPLAVLTRSLLW*FSISVLSGLLL Trigger: TAATAACAAACCGGATAAAACCGAGATAGAAAAGCACCAAAGTAATGACCGTGTAAGAACTGCCAAGGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045281.13 |
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CDS TCA 72 bp | AGATATCTCCTTGGCAAATCATACTTCGTTGAGCACTaGTCAAGGCATATTTCACTGTTTTTCGTAAAGGCT | + |
Preference number: 6 (lower is better) Translates to: RYLLGKSYFVEH*SRHISLFFVKA Trigger: AGCCTTTACGAAAAACAGTGAAATATGCCTTGATCAGTGCTCAACGAAGTATGATTTGCCAAGGAGATATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS TCA 72 bp | TACCTAGAGATATCTCCTTGGCAAATCATACTTCGTTaGGCACTGATCAAGGCATATTTCACTGTTTTTCGT | + |
Preference number: 6 (lower is better) Translates to: YLEISPWQIILR*ALIKAYFTVFR Trigger: ACGAAAAACAGTGAAATATGCCTTGATCAGTGCTCAACGAAGTATGATTTGCCAAGGAGATATCTCTAGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |
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CDS CAA 72 bp | ATACCTAGAGATATCTCCTTGGCAAATCATACTTCGTaGAGCACTGATCAAGGCATATTTCACTGTTTTTCG | + |
Preference number: 6 (lower is better) Translates to: IPRDISLANHTS*STDQGIFHCFS Trigger: CGAAAAACAGTGAAATATGCCTTGATCAGTGCTCAACGAAGTATGATTTGCCAAGGAGATATCTCTAGGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045281.13 ENSMUST00000130145.8 |