Pregenerated sensors for SMG5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001415Ensembl transcript IDs: ENSMUST00000001451.11, ENSMUST00000192009.2
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACACCCTAAGTGGGCCTGGAAGCTGGGCAGCAGCAGAGGAGAAGTaGGGCCTCCAAGTGTGCAGACCCTGCTTCCCTAAGAGCCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: HTLSGPGSWAAAEEK*GLQVCRPCFPKSPH Trigger: GTGGGGGCTCTTAGGGAAGCAGGGTCTGCACACTTGGAGGCCCCACTTCTCCTCTGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 90 bp | CTGGTGTACAGCCATCCAGCCCACACCCTAAGTGGGCCTGGAAGCTaGGCAGCAGCAGAGGAGAAGTGGGGCCTCCAAGTGTGCAGACCC | + |
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Preference number: 1 (lower is better) Translates to: LVYSHPAHTLSGPGS*AAAEEKWGLQVCRP Trigger: GGGTCTGCACACTTGGAGGCCCCACTTCTCCTCTGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTGGGCTGGATGGCTGTACACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 90 bp | GAAGGGATGACTGCTGGTGTACAGCCATCCAGCCCACACCCTAAGTaGGCCTGGAAGCTGGGCAGCAGCAGAGGAGAAGTGGGGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: EGMTAGVQPSSPHPK*AWKLGSSRGEVGPP Trigger: TGGAGGCCCCACTTCTCCTCTGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTGGGCTGGATGGCTGTACACCAGCAGTCATCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 90 bp | CTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTaGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LKSARIGNVVTPTVP*FSQTFFLSGRLEAS Trigger: GCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR TCA 90 bp | TCTTCAACTGGTGGTACATTTTGGCTGCCTTGTCATATAGTCTCTTaGGGTTCCCATAGGCTCCCTCAAAGGACACTTCCGACTGGATGC | + |
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Preference number: 1 (lower is better) Translates to: SSTGGTFWLPCHIVS*GSHRLPQRTLPTGC Trigger: GCATCCAGTCGGAAGTGTCCTTTGAGGGAGCCTATGGGAACCTCAAGAGACTATATGACAAGGCAGCCAAAATGTACCACCAGTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTCTCCTGGGCCCTCCCTaGAGCCTCAGTGCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSLLGPP*SLSAAG Trigger: GCCAGCTGCACTGAGGCTGCAGGGAGGGCCCAGGAG...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTTTAAGGTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCTGGGGTGACTACAGGTaGTGGTCCTGGTCGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: AGLRWKAGRGSMATPTPSWGDYR*WSWSPG Trigger: CCCTGGCGACCAGGACCACCACCTGTAGTCACCCCA...GCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCACCTTAAACCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGAGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTCACCCTAAGTGGGCCTaGAAGCTGGGCAGCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: WRRALSKQLPGTLPLCHPHPKWA*KLGSSR Trigger: TCTGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTG...AGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCTCCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR GCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTAAATGCAGACCCCCATaGCTGCCCCTGCCCATGCCC | + |
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Preference number: 2 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSKCRPP*LPLPMP Trigger: GGGCATGGGCAGGGGCAGGCATGGGGGTCTGCATTT...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTCTGCATGTGGTGGGGTaGCTACAGGTGGTGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSLHVVG*LQVVVL Trigger: CAGGACCACCACCTGTAGTCACCCCACCACATGCAG...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGCTCTCCCTGGATGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTACCCTGAATCTTGGGTaGGGACAGGGCCCTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LQLSLDGQRGGLGLRSLITLNLG*GQGPSV Trigger: GACAGAAGGGCCCTGTCCTCACCCAAGATTCAGGGT...AATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCATCCAGGGAGAGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGGAGCACAAAGCACAGTaGCTGCTGGTGGGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PACAQPTRALVLGVGKRREHKAQ*LLVGKG Trigger: TCCCTTCCCCACCAGCAGTCACTGTGCTTTGTGCTC...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGCTAGGCCAGTTGGGGCAGGATGGTCAGAGGGGTaGCCTTGGCCTTCGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: AGSQLLLSTAKAARPVGAGWSEG*PWPSLP Trigger: AGGGAGCGAAGGCCAAGGCCACCCCTCTGACCATCC...TGCCCCAACTGGCCTAGCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGACTGCTCCAATGAAATaGAGACCCCCATGCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: PACAQPTRALVLGVGKRRTAPMK*RPPCLP Trigger: GGGCAGGCATGGGGGTCTGCATTTCATTGGAGCAGT...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAAGTCCAGGAACTGCTCCAATGAAATGCAGACCCCCATGCCTGCCCCTGGGTGACTACAGGTGGTaGTCCTGGTCGCCAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LRSPGTAPMKCRPPCLPLGDYRW*SWSPGR Trigger: TCTCCCTGGCGACCAGGACCACCACCTGTAGTCACC...CAGGGGCAGGCATGGGGGTCTGCATTTCATTGGAGCAGTTCCTGGACTTCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGCTAGGCCAGTTGGGGCACAGGAACTGCTCCAATaGAATGCAGACCCCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: AGSQLLLSTAKAARPVGAQELLQ*NADPHA Trigger: GGCATGGGGGTCTGCATTTCATTGGAGCAGTTCCTG...TGCCCCAACTGGCCTAGCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR GCA 90 bp | GCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGCTAGGCCAGTTGGGGCATCCAAAACCAGCCTGTaGTCAGCCTACCAGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGSQLLLSTAKAARPVGASKTSL*SAYQGS Trigger: AGAGCCCTGGTAGGCTGAGCACAGGCTGGTTTTGGA...TGCCCCAACTGGCCTAGCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAACAGCCCCACCCACCCTaGATCTTGGGTGAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQQPHPP*ILGEDR Trigger: CCTGTCCTCACCCAAGATTCAGGGTGGGTGGGGCTG...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | CACACTCCTCCTCATCCTCGTTGGTTAGACCAAGGTTGGGTGAGGAGGGCAGGTCTTCCGACTGGATGCTaGAGGAGAAACAGGGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: HTPPHPRWLDQGWVRRAGLPTGC*RRNRGK Trigger: CTTACCCCTGTTTCTCCTTCAGCATCCAGTCGGAAG...ACCTGCCCTCCTCACCCAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAACCAGCTCTCCCTGGATaGTCAGAGGGGTGGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQPALPG*SEGWPW Trigger: CCAAGGCCACCCCTCTGACCATCCAGGGAGAGCTGG...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR GCA 90 bp | GCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGCTAGGCCAGTTGGGGCACAGAAGTCCAGGAACTaGTCCAATGAAATGCAGACC | + |
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Preference number: 2 (lower is better) Translates to: AGSQLLLSTAKAARPVGAQKSRN*SNEMQT Trigger: GGTCTGCATTTCATTGGAGCAGTTCCTGGACTTCTG...TGCCCCAACTGGCCTAGCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGCCCTTCTGTCATCTTTTCCTCTCAGAAGTCCAGGAACTGCTCCAATGTCCTGTTTGCCTGCTTaGGTCTGCATGTGGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: DRALLSSFPLRSPGTAPMSCLPA*VCMWWG Trigger: ACCCCACCACATGCAGACTCAAGCAGGCAAACAGGA...CATTGGAGCAGTTCCTGGACTTCTGAGAGGAAAAGATGACAGAAGGGCCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAGCAGCAGAGGAGAAGTaGGGCCTCCAAGTGTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQAAEEK*GLQVCR Trigger: TCTGCACACTTGGAGGCCCCACTTCTCCTCTGCTGC...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGCCCTTCTGTCATCTTTTCCTCTCAGAAGTCCAGGAACTGCTCCAATGACTTCCTCACTTTCCTaGTTTCGCCTTGGCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: DRALLSSFPLRSPGTAPMTSSLS*FRLGNR Trigger: CCTGTTGCCAAGGCGAAATCAGGAAAGTGAGGAAGT...CATTGGAGCAGTTCCTGGACTTCTGAGAGGAAAAGATGACAGAAGGGCCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTTTATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCTGGGGCCTCCAAGTGTaGAGACCCTGCTTCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: GSLLSLSLKSARIGNVVTWGLQV*RPCFPK Trigger: CTTAGGGAAGCAGGGTCTGCACACTTGGAGGCCCCA...GGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAATAAAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGAGTCCACGGAGCTACTTTTGGGCTGTAACAGGCTTTGTAGGTACATGTGTCATATAGTCTCTTaGGGTTCCCATAGGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSESTELLLGCNRLCRYMCHIVS*GSHRLP Trigger: AGGGAGCCTATGGGAACCTCAAGAGACTATATGACA...CATGTACCTACAAAGCCTGTTACAGCCCAAAAGTAGCTCCGTGGACTCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTCTGAGTCCACGGAGCTACTTTTGGGCTGTAACAGGCTTTGTAGGTACAAAGGACACTTCCGACTaGATGCTGAAGGAGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: SVLSPRSYFWAVTGFVGTKDTSD*MLKEKQ Trigger: CTGTTTCTCCTTCAGCATCCAGTCGGAAGTGTCCTT...TGTACCTACAAAGCCTGTTACAGCCCAAAAGTAGCTCCGTGGACTCAGAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTGAGGGTAGTCTAGGATaGAGGAGGGCCCTAAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: IKLESQVCQNWKCGNPNCEGSLG*RRALSK Trigger: CTTACTTAGGGCCCTCCTCCATCCTAGACTACCCTC...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CAA 90 bp | TACATGAAGTTCACCAACAACCTCTTAATGTCTTTGCATCGCTTTTaGCTAGGGGAGAGCTTCCTGGTCTCAGACTTCTTCAACTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: YMKFTNNLLMSLHRF*LGESFLVSDFFNWW Trigger: CCACCAGTTGAAGAAGTCTGAGACCAGGAAGCTCTCCCCTAGCAAAAAGCGATGCAAAGACATTAAGAGGTTGTTGGTGAACTTCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR CAA 90 bp | AGGCTTTGTAGGTACATGAAGTTCACCAACAACCTCTTAATGTCTTaGCATCGCTTTTTGCTAGGGGAGAGCTTCCTGGTCTCAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: RLCRYMKFTNNLLMS*HRFLLGESFLVSDF Trigger: GAAGTCTGAGACCAGGAAGCTCTCCCCTAGCAAAAAGCGATGCAAAGACATTAAGAGGTTGTTGGTGAACTTCATGTACCTACAAAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTGCCCCTGAGTATTCATaGTCTCTGCTCCTGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: IKLESQVCQNWKCGNPNCAPEYS*SLLLCH Trigger: ATGACACAGGAGCAGAGATCATGAATACTCAGGGGC...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTGAGTCCACGGAGCTACTTTTGGGCTGTAACAGGCTTTGTAGGTACATGACTGGTGGTACATTTTaGCTGCCTTGTCATATAGTC | + |
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Preference number: 2 (lower is better) Translates to: SSESTELLLGCNRLCRYMTGGTF*LPCHIV Trigger: GACTATATGACAAGGCAGCCAAAATGTACCACCAGT...CATGTACCTACAAAGCCTGTTACAGCCCAAAAGTAGCTCCGTGGACTCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCATATCCACTTTCACACTCCTCCTCATCCTCGTTGGTTAGACCAAGGTTGGACTTCTTCAACTGGTaGTACATTTTGGCTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KAYPLSHSSSSSLVRPRLDFFNW*YILAAL Trigger: CAAGGCAGCCAAAATGTACCACCAGTTGAAGAAGTC...CAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTGAAAGTGGATATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR GCA 72 bp | TGGGCAGCAGCAGAGGAGAAGTGGGGCCTCCAAGTGTaGAGACCCTGCTTCCCTAAGAGCCCCCACAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: WAAAEEKWGLQV*RPCFPKSPHSW Trigger: CCAGCTGTGGGGGCTCTTAGGGAAGCAGGGTCTGCACACTTGGAGGCCCCACTTCTCCTCTGCTGCTGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CAA 90 bp | GCAGGTTTAAGGTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCTTCCTGTTTGCCTGCTaGAGTCTGCATGTGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: AGLRWKAGRGSMATPTPSFLFAC*SLHVVG Trigger: CCCCACCACATGCAGACTCAAGCAGGCAAACAGGAA...GCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCACCTTAAACCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 72 bp | ACTGCTGGTGTACAGCCATCCAGCCCACACCCTAAGTaGGCCTGGAAGCTGGGCAGCAGCAGAGGAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: TAGVQPSSPHPK*AWKLGSSRGEV Trigger: CACTTCTCCTCTGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTGGGCTGGATGGCTGTACACCAGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR TCA 72 bp | ATGGCCACTCCTACGCCAAGCACTTCCTCACTTTCCTaGTTTCGCCTTGGCAACAGGGGCCCCCATCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: MATPTPSTSSLS*FRLGNRGPHPP Trigger: GGGAGGATGGGGGCCCCTGTTGCCAAGGCGAAATCAGGAAAGTGAGGAAGTGCTTGGCGTAGGAGTGGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 72 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTaGCACCCCTTATCCAGTACAGCAGCCAAGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: WSEGWPWPSLPH*HPLSSTAAKST Trigger: TGTGCTCTTGGCTGCTGTACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CAA 90 bp | GCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGCTAGGCCAGTTGGGGCAGCCTTCGCTCCCTCATaGGCACCCCTTATCCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: AGSQLLLSTAKAARPVGAAFAPS*APLIQY Trigger: GTACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGC...TGCCCCAACTGGCCTAGCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 72 bp | CCTGGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTaGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PGFPRPSFLVEG*KPAPLKHSQSS Trigger: GCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 72 bp | AAGCATATCCACTTTCACACTCCTCCTCATCCTCGTTaGTTAGACCAAGGTTGGGTGAGGAGGGCAGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: KHIHFHTPPHPR*LDQGWVRRAGR Trigger: TCTACCTGCCCTCCTCACCCAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTGAAAGTGGATATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR TCA 72 bp | GGTGGTACATTTTGGCTGCCTTGTCATATAGTCTCTTaGGGTTCCCATAGGCTCCCTCAAAGGACACTTCCG | + |
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Preference number: 3 (lower is better) Translates to: GGTFWLPCHIVS*GSHRLPQRTLP Trigger: CGGAAGTGTCCTTTGAGGGAGCCTATGGGAACCTCAAGAGACTATATGACAAGGCAGCCAAAATGTACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR CCA 72 bp | GCCAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTaGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ARIGNVVTPTVP*FSQTFFLSGRL Trigger: CAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CCA 72 bp | GGGGAGAGCTTCCTGGTCTCAGACTTCTTCAACTGGTaGTACATTTTGGCTGCCTTGTCATATAGTCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: GESFLVSDFFNW*YILAALSYSLL Trigger: CAAGAGACTATATGACAAGGCAGCCAAAATGTACCACCAGTTGAAGAAGTCTGAGACCAGGAAGCTCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR GCA 72 bp | GGGAAGGGGGTCTTTATTAAGCTTGAGTCTCAAGTCTaGCAGAATTGGAAATGTGGTAACCCCAACTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: GKGVFIKLESQV*QNWKCGNPNCS Trigger: GGAACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAATAAAGACCCCCTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR-3UTR CAA 90 bp | AGTTCTGAGTCCACGGAGCTACTTTTGGGCTGTAACAGGCTTTGTAGGTACATGTACATTTTGGCTGCCTaGTCATATAGTCTCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: SSESTELLLGCNRLCRYMYILAA*SYSLLR Trigger: CCTCAAGAGACTATATGACAAGGCAGCCAAAATGTA...CATGTACCTACAAAGCCTGTTACAGCCCAAAAGTAGCTCCGTGGACTCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR CCA 72 bp | GTCTTTATTAAGCTTGAGTCTCAAGTCTGCCAGAATTaGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: VFIKLESQVCQN*KCGNPNCSLVF Trigger: GAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAATAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GACCCTGCTTCCCTAAGAGCCCCCACAGCTGGCTCTAGAGCTGCCCTGTTCCCCGCAGGGCAGCCTGCATaGGCCCAGAGAGTGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPASLRAPTAGSRAALFPAGQPA*AQRVHW Trigger: CCAGTGCACTCTCTGGGCCCATGCAGGCTGCCCTGC...GGGGAACAGGGCAGCTCTAGAGCCAGCTGTGGGGGCTCTTAGGGAAGCAGGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | GTGTACAGCCATCCAGCCCACACCCTAAGTGGGCCTGGAAGCTGGGCAGCAGCACCTCCAGGTACCGGATaGCATCCCTGGCCCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYSHPAHTLSGPGSWAAAPPGTG*HPWPLA Trigger: AGCCAGGGGCCAGGGATGGCATCCGGTACCTGGAGG...TGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTGGGCTGGATGGCTGTACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | GCAGGTTTAAGGTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCGCTTGCAGGGCAGCCTaGATGGGCCCAGAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLRWKAGRGSMATPTPSACRAA*MGPESA Trigger: TGCACTCTCTGGGCCCATGCAGGCTGCCCTGCAAGC...GCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCACCTTAAACCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | GGTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGAGGGGATCGGTGACGTaGGTCCAGTCGATGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRQGEQEKSGVSPTAGRGSVT*VQSMQH Trigger: GTGCTGCATCGACTGGACTCACGTCACCGATCCCCT...CCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GACCCTGCTTCCCTAAGAGCCCCCACAGCTGGCTCTAGAGCTGCCCTGTTCCCCTCTGCCATACGAAACTaGGCCTGGGCCTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPASLRAPTAGSRAALFPSAIRN*AWACCS Trigger: GCTGCAGCAGGCCCAGGCCCAGTTTCGTATGGCAGA...GGGGAACAGGGCAGCTCTAGAGCCAGCTGTGGGGGCTCTTAGGGAAGCAGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCACTTCCTCACTCCACTGGTGGCAAGCTaGCGGATAAGAGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEGWPGVHGHSYAKHFLTPLVAS*RIRGRW Trigger: CCACCTCCCTCTTATCCGCCAGCTTGCCACCAGTGG...AGTGAGGAAGTGCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | GTGTACAGCCATCCAGCCCACACCCTAAGTGGGCCTGGAAGCTGGGCAGCAGCAGCAGGAGCAGGTTGCTaGAAGTGGGAGCCAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VYSHPAHTLSGPGSWAAAAGAGC*KWEPVG Trigger: TCCGACTGGCTCCCACTTTCAGCAACCTGCTCCTGC...TGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTGGGCTGGATGGCTGTACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR TCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTGGACTCGCTCCCCTCTaGCTCGGAGCCATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSGLAPL*LGAILR Trigger: TCTGAGGATGGCTCCGAGTCAGAGGGGAGCGAGTCC...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTTCCTCCGTAGGGAGACATGGCTaGCTGAGCTTTGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RALSKQLPGTLPLCHPSSVGRHG*LSFGLL Trigger: CAGCAGCCCAAAGCTCAGTCAGCCATGTCTCCCTAC...GGAGGAAGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | CTCCAGCTCTCCCTGGATGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTATACGAAACTGGGCCTaGGCCTGCTGCAGCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQLSLDGQRGGLGLRSLIIRNWA*ACCSRL Trigger: GAGCCTGCTGCAGCAGGCCCAGGCCCAGTTTCGTAT...AATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCATCCAGGGAGAGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| 3UTR CAA 72 bp | TCCTCCAGCTCTCCCTGGATGGTCAGAGGGGTGGCCTaGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSPWMVRGVA*AFAPSLAPLIQ Trigger: CTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCATCCAGGGAGAGCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR TCA 90 bp | GTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGCCAGATGATGGCCATCTaGAAGATGAGCAGGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVARENRRNLESAPRQGQMMAI*KMSRSG Trigger: CCCCGACCTGCTCATCTTTCAGATGGCCATCATCTG...GCCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | TGGAGGAGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTCATATCTTCCAGGTCTaGCCGGGACTCCTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WRRALSKQLPGTLPLCHPHIFQV*PGLLAV Trigger: AACAGCCAGGAGTCCCGGTCAGACCTGGAAGATATG...AGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCTCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGGGAGACATGGCTGACTaGGCTTTGGGCTGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PACAQPTRALVLGVGKRRGDMAD*ALGCCR Trigger: CCTACAGCAGCCCAAAGCTCAGTCAGCCATGTCTCC...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | TGGAGGAGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTATGAGATCTAGCCGATaGACAGCCTCCACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRRALSKQLPGTLPLCHPMRSSR*TASTTA Trigger: GGCTGTGGTGGAGGCTGTGCATCGGCTAGATCTCAT...AGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCTCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | GGTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGCAAGAGAGTCGGGAGTaGTTACGGCTCTTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRQGEQEKSGVSPTAGQESRE*LRLFLP Trigger: GGGCAGAAAGAGCCGTAAGCACTCCCGACTCTCTTG...CCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | GTGTACAGCCATCCAGCCCACACCCTAAGTGGGCCTGGAAGCTGGGCAGCAGCAATTGCTGGCAATGCTTaGTTCACTGGGGCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VYSHPAHTLSGPGSWAAAIAGNA*FTGAQG Trigger: CCCCTGGGCCCCAGTGAAGCAAGCATTGCCAGCAAT...TGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTGGGCTGGATGGCTGTACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | CTCCAGCTCTCCCTGGATGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGTCGGAAGCAGCGCTTaGTCTGGAACATCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQLSLDGQRGGLGLRSLIVGSSA*SGTSGW Trigger: CCACCCAGATGTTCCAGACCAAGCGCTGCTTCCGAC...AATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCATCCAGGGAGAGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GGTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGTGGCTGACTGAGCTTTaGGCTGCTGTAGGCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGRQGEQEKSGVSPTAGWLTEL*AAVGSL Trigger: AAGGGAGCCTACAGCAGCCCAAAGCTCAGTCAGCCA...CCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTACGTCCACACTGGCATaGGCAGCAGCTTGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSTSTLA*AAACRA Trigger: TGCCCTGCAAGCTGCTGCCCATGCCAGTGTGGACGT...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR TCA 90 bp | GACCCTGCTTCCCTAAGAGCCCCCACAGCTGGCTCTAGAGCTGCCCTGTTCCCCCGGTTCCACAAACTTTaGGAGCTCTGTGCACACACG | + |
|
Preference number: 4 (lower is better) Translates to: DPASLRAPTAGSRAALFPRFHKL*ELCAHT Trigger: CGTGTGTGCACAGAGCTCTCAAAGTTTGTGGAACCG...GGGGAACAGGGCAGCTCTAGAGCCAGCTGTGGGGGCTCTTAGGGAAGCAGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | GCAGGTTTAAGGTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCCTCTCCTGCTCAGACTaGGCAATGCTGACGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGLRWKAGRGSMATPTPSLSCSD*AMLTKM Trigger: CATCTTCGTCAGCATTGCTCAGTCTGAGCAGGAGAG...GCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCACCTTAAACCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR TCA 90 bp | GCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGCTAGGCCAGTTGGGGCAGAGCCATGTCTCTCATaGGCCTGTTCCGCCGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSQLLLSTAKAARPVGAEPCLS*ACSAEP Trigger: AGGCTCGGCGGAACAGGCTCATGAGAGACATGGCTC...TGCCCCAACTGGCCTAGCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | GACCCTGCTTCCCTAAGAGCCCCCACAGCTGGCTCTAGAGCTGCCCTGTTCCCCAGGCACATTCCAAGGTaGTCCGACTGTGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPASLRAPTAGSRAALFPRHIPR*SDCGCA Trigger: AGCACATCCACAGTCGGAGCACCTTGGAATGTGCCT...GGGGAACAGGGCAGCTCTAGAGCCAGCTGTGGGGGCTCTTAGGGAAGCAGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTGGTTCCGTGGTGGGCTaGAGGAGCAGGTTGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSGSVVG*RSRLLK Trigger: TTTCAGCAACCTGCTCCTGCAGCCCACCACGGAACC...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | GCAGGTTTAAGGTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCCAGGCATCTGCATCCTaGCTCTTCAGTTTATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLRWKAGRGSMATPTPSQASAS*LFSLCR Trigger: GCGGCATAAACTGAAGAGGCAGGATGCAGATGCCTG...GCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCACCTTAAACCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | TGGAGGAGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTGCAAGGGTACCCAGCTaGTTGAAGGGCATTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: WRRALSKQLPGTLPLCHPARVPS*LKGIPI Trigger: GATTGGAATGCCCTTCAACCAGCTGGGTACCCTTGC...AGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCTCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CAA 72 bp | ATGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATaGGCACCCCTTATCCAGTACAGCAGCCAAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MVRGVALAFAPS*APLIQYSSQEH Trigger: GTGCTCTTGGCTGCTGTACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR TCA 90 bp | TGGAGGAGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTTCTGTGCCATCACTCTaGAAAGCTGAGACAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WRRALSKQLPGTLPLCHPSVPSL*KAETGF Trigger: GAACCCTGTCTCAGCTTTTCAGAGTGATGGCACAGA...AGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCTCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR TCA 90 bp | GGTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGAGCTGTAATCGTAGCTaGGCCATGTCTCTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRQGEQEKSGVSPTAGSCNRS*AMSLMS Trigger: GCTCATGAGAGACATGGCTCAGCTACGATTACAGCT...CCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | GGTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGGTGGCAAGCCATTTGTaGCCAATCCATCTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRQGEQEKSGVSPTAGVASHL*PIHLLS Trigger: GGAAAGGAGATGGATTGGGCACAAATGGCTTGCCAC...CCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | GTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGCGTAAATTGCTGGCAATaGTTGCTTCACTGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLVARENRRNLESAPRQGVNCWQ*LLHWGP Trigger: TGGGCCCCAGTGAAGCAAGCATTGCCAGCAATTTAC...GCCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GTCCTGGTCGCCAGGGAGAACAGGAGAAATCTGGAGTCAGCCCCACGGCAGGGCTCTGACCGGGACTCCTaGCTGTTCATTTCTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLVARENRRNLESAPRQGSDRDS*LFISES Trigger: AGACTCAGAAATGAACAGCCAGGAGTCCCGGTCAGA...GCCCTGCCGTGGGGCTGACTCCAGATTTCTCCTGTTCTCCCTGGCGACCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR TCA 90 bp | CTCAGAAGTCCAGGAACTGCTCCAATGAAATGCAGACCCCCATGCCTGCCCCTGGGGTACCCAGCTGGTTaGAGGGCATTCCAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSPGTAPMKCRPPCLPLGYPAG*RAFQSG Trigger: CCCAGATTGGAATGCCCTTCAACCAGCTGGGTACCC...CAGGGGCAGGCATGGGGGTCTGCATTTCATTGGAGCAGTTCCTGGACTTCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTGCTTACGGCTCTTTCTaGCCTCATCAGCTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSAYGSF*PHQLGV Trigger: TACCCCAAGCTGATGAGGGCAGAAAGAGCCGTAAGC...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | CTCCAGCTCTCCCTGGATGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTTCCCTTTTTAAACTCTaGCTCCAGGTACCGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLSLDGQRGGLGLRSLISLFKL*LQVPDA Trigger: GGCATCCGGTACCTGGAGGCAGAGTTTAAAAAGGGA...AATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCATCCAGGGAGAGCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | GACCCTGCTTCCCTAAGAGCCCCCACAGCTGGCTCTAGAGCTGCCCTGTTCCCCCCAGAGTTAGCTGTCTaGAGCTGTCCAGGATCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: DPASLRAPTAGSRAALFPPELAV*SCPGSY Trigger: ATAAGATCCTGGACAGCTGCAGACAGCTAACTCTGG...GGGGAACAGGGCAGCTCTAGAGCCAGCTGTGGGGGCTCTTAGGGAAGCAGGGTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | CTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTGCATGGGCAGCAGCTTaGAGGGCAGCCTGCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPGFPRPSFLVEGWKPAAWAAA*RAACMG Trigger: GCCCATGCAGGCTGCCCTGCAAGCTGCTGCCCATGC...AGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTAAGCAGCGCTTGGTCTaGAACATCTGGGTGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSKQRLV*NIWVDM Trigger: CATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTT...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGCTTTGTTGCAAAGGATaGGATCTAGCCGATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PACAQPTRALVLGVGKRRLCCKG*DLADAQ Trigger: CTGTGCATCGGCTAGATCTCATCCTTTGCAACAAAG...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCACTTCCTCACTCTGGCTGTTCATTTCTaGGTCTGTCTCTGCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VEGWPGVHGHSYAKHFLTLAVHF*VCLCIK Trigger: TTTGATGCAGAGACAGACTCAGAAATGAACAGCCAG...AGTGAGGAAGTGCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTGTAATACTTGCTGCCTaGAAGGGTACCCAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSVILAA*KGTQLV Trigger: AACCAGCTGGGTACCCTTGCAGGCAGCAAGTATTAC...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | GCAGGTTTAAGGTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCGGTGAAAGCAATGGCTaGACTATAATGCTTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AGLRWKAGRGSMATPTPSGESNG*TIMLGS Trigger: GGATCCAAGCATTATAGTGCAGCCATTGCTTTCACC...GCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCACCTTAAACCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGACCTCTGGATTGAACTaGAGGATGCTGCCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PACAQPTRALVLGVGKRRTSGLN*RMLPCK Trigger: CTTACAAGGCAGCATCCTGCAGTTCAATCCAGAGGT...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTGAGAGTCCAGGCATCTaGATCCTGCCTCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSESPGI*ILPLQF Trigger: AAACTGAAGAGGCAGGATGCAGATGCCTGGACTCTC...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGATCCATCTCCTTTCCTaGAGCAGATACTGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PACAQPTRALVLGVGKRRIHLLS*SRYWLL Trigger: AAGAAGCCAGTATCTGCTTCAGGAAAGGAGATGGAT...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCACTTCCTCACTACATGGCTTGTAAATTaGTGGCAATGCTTGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VEGWPGVHGHSYAKHFLTTWLVN*WQCLLH Trigger: GTGAAGCAAGCATTGCCAGCAATTTACAAGCCATGT...AGTGAGGAAGTGCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCTCTCCCTGGATGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTTTGGTCTGGAACATCTaGGTGGACATGGCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQLSLDGQRGGLGLRSLILVWNI*VDMACK Trigger: TTTACAAGCCATGTCCACCCAGATGTTCCAGACCAA...AATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCATCCAGGGAGAGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | GAGAGCTTCCTGGTCTCAGACTTCTTCAACTGGTGGTACATTTTGGCTGCCTTGAGGGGATCGGTGACGTaGGTCCAGTCGATGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESFLVSDFFNWWYILAALRGSVT*VQSMQH Trigger: GTGCTGCATCGACTGGACTCACGTCACCGATCCCCT...CAAGGCAGCCAAAATGTACCACCAGTTGAAGAAGTCTGAGACCAGGAAGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAGTCCAGGAACTGCTCCAATGAAATGCAGACCCCCATGCCTGCCCCTGAAAAGAGGGCCAGGGTaGAAGCAATGGCTGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPGTAPMKCRPPCLPLKRGPG*KQWLHY Trigger: ATAGTGCAGCCATTGCTTTCACCCTGGCCCTCTTTT...CAGGGGCAGGCATGGGGGTCTGCATTTCATTGGAGCAGTTCCTGGACTTCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | CTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCATGGGCCCAGAGAGTaGACTGGGGCTGTCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LFPGFPRPSFLVEGWKPAHGPRE*TGAVQM Trigger: CATTTGGACAGCCCCAGTGCACTCTCTGGGCCCATG...AGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAATTCGCTGCTCTCCCCTaGAGGAGGGCCTTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQFAALP*RRALAH Trigger: ATGAGCCAAGGCCCTCCTCCAGGGGAGAGCAGCGAA...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | GGAGAGCTTCCTGGTCTCAGACTTCTTCAACTGGTGGTACATTTTGGCTGCCTTGGGTACCCAGCTGGTTaGAGGGCATTCCAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GELPGLRLLQLVVHFGCLGYPAG*RAFQSG Trigger: CCCAGATTGGAATGCCCTTCAACCAGCTGGGTACCC...AAGGCAGCCAAAATGTACCACCAGTTGAAGAAGTCTGAGACCAGGAAGCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR TCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAACTCCTCTAAAGCACTaGGCAGGGGCCGATCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQTPLKH*AGADLR Trigger: ACGCAGATCGGCCCCTGCTCAGTGCTTTAGAGGAGT...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGCTCCGACTGTGGATGTaGTTTTTGTTAGTCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PACAQPTRALVLGVGKRRLRLWM*FLLVLI Trigger: TATCAAGACTAACAAAAAGCACATCCACAGTCGGAG...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | CTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTGCTGGTAGAAGCCAATaGCAGCGACCAGATGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPGFPRPSFLVEGWKPAAGRSQ*QRPDES Trigger: GGACTCATCTGGTCGCTGGCATTGGCTTCTACCAGC...AGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTGTGCTCAGCCTACCAGGGCTCTAGTTCTGGGGGTGGGCAAAAGGAGGCTGCACTATAATGCTTaGATCCTGCTCTCTTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PACAQPTRALVLGVGKRRLHYNA*ILLSLN Trigger: GTTTAAAGAGAGCAGGATCCAAGCATTATAGTGCAG...CCTCCTTTTGCCCACCCCCAGAACTAGAGCCCTGGTAGGCTGAGCACAGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | CAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCCTCCCCTGCCCCCTaGGCCAGAGTTAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNWKCGNPNCSLVFPDLLSSPAP*ARVSCL Trigger: CAGACAGCTAACTCTGGCCCAGGGGGCAGGGGAGGA...AAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | AGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTGGTCACCATGCCACTTaGGTCCTCCTCCCCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIGNVVTPTVPWFSQTFFGHHAT*VLLPCP Trigger: GGGGCAGGGGAGGAGGACCCAAGTGGCATGGTGACC...AAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | AGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTGCCTGCAGCTTCTCCTaGAGGCTGCGCTCGTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RIGNVVTPTVPWFSQTFFACSFS*RLRSLR Trigger: TCGCAACGAGCGCAGCCTTCAGGAGAAGCTGCAGGC...AAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAATGCCGACCTCTGGATTaGACTGCAGGATGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQCRPLD*TAGCCL Trigger: AAGGCAGCATCCTGCAGTTCAATCCAGAGGTCGGCA...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | TTGGATCCTGCTCTCTTTAAACTGTGCACACCCATGAGGCAGATGATGGCCATCGCTGGTAGAAGCCAATaGCAGCGACCAGATGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDPALFKLCTPMRQMMAIAGRSQ*QRPDES Trigger: GGACTCATCTGGTCGCTGGCATTGGCTTCTACCAGC...GATGGCCATCATCTGCCTCATGGGTGTGCACAGTTTAAAGAGAGCAGGATCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTGAGCCGTCACTGGCCTaGGCAGAGTCATGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNVVTPTVPWFSQTFFLSEPSLA*AESWLE Trigger: CTCTAGCCATGACTCTGCCCAGGCCAGTGACGGCTC...ACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTATCAGAGCCACTGTCTaGGCCGTCACTGGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKLESQVCQNWKCGNPNCIRATV*AVTGLG Trigger: GCCCAGGCCAGTGACGGCTCAGACAGTGGCTCTGAT...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | ATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTGGTGTGGAGGACCTTTaGCTCGGGTTCGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGNVVTPTVPWFSQTFFLGVEDL*LGFAAL Trigger: GAGAGCAGCGAACCCGAGGCAAAGGTCCTCCACACC...AAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | TATCCACTTTCACACTCCTCCTCATCCTCGTTGGTTAGACCAAGGTTGGGTGAGCGTGAGTCCAGTCGATaGAGCACTGTAGTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPLSHSSSSSLVRPRLGERESSR*STVVPA Trigger: AGCTGGAACTACAGTGCTGCATCGACTGGACTCACG...CTCACCCAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTGAAAGTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGAGCTTCCTGGTCTCAGACTTCTTCAACTGGTGGTACATTTTGGCTGCCGTTGTAATACTTGCTaGCTGCAAGGGTACCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGELPGLRLLQLVVHFGCRCNTC*LQGYPA Trigger: AGCTGGGTACCCTTGCAGGCAGCAAGTATTACAACG...GCAGCCAAAATGTACCACCAGTTGAAGAAGTCTGAGACCAGGAAGCTCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCTTTATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCTGCGACAGGAGCGGTTaGTGGACTCGCTCCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLSLSLKSARIGNVVTCDRSG*WTRSPL Trigger: CAGAGGGGAGCGAGTCCAGCAACCGCTCCTGTCGCA...GGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAATAAAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAGAGCAGGGGCCGATCTaGGTCAAAGTTAAAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQEQGPI*VKVKAS Trigger: AGACGCTTTAACTTTGACGCAGATCGGCCCCTGCTC...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GAGAGCTTCCTGGTCTCAGACTTCTTCAACTGGTGGTACATTTTGGCTGCCTTGGCAAGGGTACCCAGCTaGTTGAAGGGCATTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ESFLVSDFFNWWYILAALARVPS*LKGIPI Trigger: GATTGGAATGCCCTTCAACCAGCTGGGTACCCTTGC...CAAGGCAGCCAAAATGTACCACCAGTTGAAGAAGTCTGAGACCAGGAAGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| CDS-3UTR CCA 90 bp | AGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTGCCCTCATCAGCTTaGGGTACCACAGTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RIGNVVTPTVPWFSQTFFLPSSA*GTTVGG Trigger: GCCTCCCACTGTGGTACCCCAAGCTGATGAGGGCAG...AAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTCCAGCTTTAGGAGGATaGTGGCGGCGGCGACGACGT | + |
|
Preference number: 4 (lower is better) Translates to: IKLESQVCQNWKCGNPNCPALGG*WRRRRR Trigger: ACGTCGTCGCCGCCGCCACCATCCTCCTAAAGCTGG...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GGGTCTTTATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCTGGAACCTCTGATCTaGCCTGAGGGGGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLSLSLKSARIGNVVTLEPLI*PEGAPG Trigger: CCCAGGAGCCCCCTCAGGCCAGATCAGAGGTTCCAG...GGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAATAAAGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAACGTTGTAATACTTGCTaGCTGCAAGGGTACCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQRCNTC*LQGYPA Trigger: AGCTGGGTACCCTTGCAGGCAGCAAGTATTACAACG...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR GCA 90 bp | AGTTCTGAGTCCACGGAGCTACTTTTGGGCTGTAACAGGCTTTGTAGGTACATGGTGGCAAGCCATTTGTaGCCAATCCATCTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSESTELLLGCNRLCRYMVASHL*PIHLLS Trigger: GGAAAGGAGATGGATTGGGCACAAATGGCTTGCCAC...CATGTACCTACAAAGCCTGTTACAGCCCAAAAGTAGCTCCGTGGACTCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| CDS-3UTR GCA 90 bp | TCAGTTCTGAGTCCACGGAGCTACTTTTGGGCTGTAACAGGCTTTGTAGGTACAGTAATACTTGCTGCCTaGAAGGGTACCCAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLSPRSYFWAVTGFVGTVILAA*KGTQLV Trigger: AACCAGCTGGGTACCCTTGCAGGCAGCAAGTATTAC...TGTACCTACAAAGCCTGTTACAGCCCAAAAGTAGCTCCGTGGACTCAGAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| CDS-3UTR GCA 90 bp | ATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTCTGCATCAAAAGCAGTaGCCCTGCCTTCCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGNVVTPTVPWFSQTFFLLHQKQ*PCLPGS Trigger: AGAGCCTGGAAGGCAGGGGCACTGCTTTTGATGCAG...AAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | GACAGGGCCCTTCTGTCATCTTTTCCTCTCAGAAGTCCAGGAACTGCTCCAATGTCAGACTTCTTCAACTaGTGGTACATTTTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRALLSSFPLRSPGTAPMSDFFN*WYILAA Trigger: GGCAGCCAAAATGTACCACCAGTTGAAGAAGTCTGA...CATTGGAGCAGTTCCTGGACTTCTGAGAGGAAAAGATGACAGAAGGGCCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | CAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTGGTTAGACCAAGGTTaGGTGAGGAGGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNWKCGNPNCSLVFPDLLWLDQG*VRRAGR Trigger: TCTACCTGCCCTCCTCACCCAACCTTGGTCTAACCA...AAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | AGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTAGTCTAGAACGTTCTTaGCGTCCACACTGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIGNVVTPTVPWFSQTFFSLERS*RPHWHG Trigger: CCCATGCCAGTGTGGACGTCAAGAACGTTCTAGACT...AAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | AGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCGTGAGTCCAGTCGATaGAGCACTGTAGTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RIGNVVTPTVPWFSQTFFRESSR*STVVPA Trigger: AGCTGGAACTACAGTGCTGCATCGACTGGACTCACG...AAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAATCTGGAACATCTGGGTaGACATGGCTTGTAAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQSGTSG*TWLVNC Trigger: GCAATTTACAAGCCATGTCCACCCAGATGTTCCAGA...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | GGGTCTTTATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCAAGTTAAAGCGTCTATaGGCAGCCCGCAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLSLSLKSARIGNVVTKLKRL*AARRGG Trigger: ACCTCCTCTGCGGGCTGCTCATAGACGCTTTAACTT...GGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAATAAAGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | GACAGGGCCCTTCTGTCATCTTTTCCTCTCAGAAGTCCAGGAACTGCTCCAATGGCAAGTAGCAATACATaGCTTCCACGTTGTAATACT | + |
|
Preference number: 4 (lower is better) Translates to: DRALLSSFPLRSPGTAPMASSNT*LPRCNT Trigger: AGTATTACAACGTGGAAGCCATGTATTGCTACTTGC...CATTGGAGCAGTTCCTGGACTTCTGAGAGGAAAAGATGACAGAAGGGCCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | AGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAACTGGTGGTACATTTTaGCTGCCTTGTCATATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPSFLVEGWKPAPLKHSQTGGTF*LPCHIV Trigger: GACTATATGACAAGGCAGCCAAAATGTACCACCAGT...TTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR TCA 90 bp | AAAGCATATCCACTTTCACACTCCTCCTCATCCTCGTTGGTTAGACCAAGGTTGATCCATCTCCTTTCCTaGAGCAGATACTGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAYPLSHSSSSSLVRPRLIHLLS*SRYWLL Trigger: AAGAAGCCAGTATCTGCTTCAGGAAAGGAGATGGAT...CAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTGAAAGTGGATATGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGCTTCCTGGTCTCAGACTTCTTCAACTGGTGGTACATTTTGGCTGCCTTGCTCCGACTGTGGATGTaGTTTTTGTTAGTCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ESFLVSDFFNWWYILAALLRLWM*FLLVLI Trigger: TATCAAGACTAACAAAAAGCACATCCACAGTCGGAG...CAAGGCAGCCAAAATGTACCACCAGTTGAAGAAGTCTGAGACCAGGAAGCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR GCA 90 bp | AGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTGCTCTCTTTAAACTGTaGACACCCATGAGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RIGNVVTPTVPWFSQTFFALFKL*TPMRQM Trigger: CATCTGCCTCATGGGTGTGCACAGTTTAAAGAGAGC...AAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTCTGGAGCTCAGCAGATaGTGGCAACAGATTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKLESQVCQNWKCGNPNCLELSR*WQQIQQ Trigger: TTGCTGAATCTGTTGCCAGCATCTGCTGAGCTCCAG...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR GCA 90 bp | AGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTTGCCTCTTCAGTTTATaGCGCTCAAAGCTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIGNVVTPTVPWFSQTFFCLFSL*RSKLFP Trigger: GGGAAAGAGCTTTGAGCGGCATAAACTGAAGAGGCA...AAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | TATCCACTTTCACACTCCTCCTCATCCTCGTTGGTTAGACCAAGGTTGGGTGAGGCAAGTAGCAATACATaGCTTCCACGTTGTAATACT | + |
|
Preference number: 4 (lower is better) Translates to: YPLSHSSSSSLVRPRLGEASSNT*LPRCNT Trigger: AGTATTACAACGTGGAAGCCATGTATTGCTACTTGC...CTCACCCAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTGAAAGTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTTGGCTTGTAAATTGCTaGCAATGCTTGCTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNVVTPTVPWFSQTFFLSWLVNC*QCLLHW Trigger: CCAGTGAAGCAAGCATTGCCAGCAATTTACAAGCCA...ACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
||
| CDS-3UTR CCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTGAAGATGCCGACCTCTaGATTGAACTGCAGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKLESQVCQNWKCGNPNCEDADL*IELQDA Trigger: AGCATCCTGCAGTTCAATCCAGAGGTCGGCATCTTC...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| 3UTR CAA 72 bp | TTCACCAACAACCTCTTAATGTCTTTGCATCGCTTTTaGCTAGGGGAGAGCTTCCTGGTCTCAGACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTNNLLMSLHRF*LGESFLVSDFF Trigger: GAAGAAGTCTGAGACCAGGAAGCTCTCCCCTAGCAAAAAGCGATGCAAAGACATTAAGAGGTTGTTGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| 3UTR CAA 72 bp | AGGTACATGAAGTTCACCAACAACCTCTTAATGTCTTaGCATCGCTTTTTGCTAGGGGAGAGCTTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RYMKFTNNLLMS*HRFLLGESFLV Trigger: GACCAGGAAGCTCTCCCCTAGCAAAAAGCGATGCAAAGACATTAAGAGGTTGTTGGTGAACTTCATGTACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| CDS-3UTR TCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTTGTCATATAGTCTCTTaGGGTTCCCATAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKLESQVCQNWKCGNPNCCHIVS*GSHRLP Trigger: AGGGAGCCTATGGGAACCTCAAGAGACTATATGACA...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | ATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTTTTCCCACCTCCTTCTaGCAGCGAATGTATCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IGNVVTPTVPWFSQTFFLFPTSF*QRMYLF Trigger: AAACAGATACATTCGCTGCCAGAAGGAGGTGGGAAA...AAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTGACTTCTTCAACTGGTaGTACATTTTGGCTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLESQVCQNWKCGNPNCDFFNW*YILAAL Trigger: CAAGGCAGCCAAAATGTACCACCAGTTGAAGAAGTC...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CCA 90 bp | CAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTATCAATCACTGTCCTTaGAATGATGATGATGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QNWKCGNPNCSLVFPDLLINHCP*NDDDEA Trigger: CGCTTCATCATCATCATTCCAAGGACAGTGATTGAT...AAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 90 bp | CCTCAGCCATCAGGGCCTGCAGCTTCTCCTGAAGGCTGCGCTCGTTaGGACAGGAGCGGTTGCTGGACTCGCTCCCCTCTGACTCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQPSGPAASPEGCAR*DRSGCWTRSPLTRS Trigger: GCTCCGAGTCAGAGGGGAGCGAGTCCAGCAACCGCTCCTGTCGCAACGAGCGCAGCCTTCAGGAGAAGCTGCAGGCCCTGATGGCTGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 90 bp | AGCCTCCACCACAGCCCGGTAAAGCCGCTTGGTGTGGAGGACCTTTaGCTCGGGTTCGCTGCTCTCCCCTGGAGGAGGGCCTTGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLHHSPVKPLGVEDL*LGFAALPWRRALAH Trigger: ATGAGCCAAGGCCCTCCTCCAGGGGAGAGCAGCGAACCCGAGGCAAAGGTCCTCCACACCAAGCGGCTTTACCGGGCTGTGGTGGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 90 bp | CCTGCAGCTTCTCCTGAAGGCTGCGCTCGTTGCGACAGGAGCGGTTaGTGGACTCGCTCCCCTCTGACTCGGAGCCATCCTCAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAASPEGCARCDRSG*WTRSPLTRSHPQRL Trigger: CAGCCTCTGAGGATGGCTCCGAGTCAGAGGGGAGCGAGTCCAGCAACCGCTCCTGTCGCAACGAGCGCAGCCTTCAGGAGAAGCTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | GACCCTGCTTCCCTAAGAGCCCCCACAGCTGGCTCTAGAGCTGCCCTGTTCCCCTTGCGACAGGAGCGGTaGCTGGACTCGCTCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DPASLRAPTAGSRAALFPLRQER*LDSLPS Trigger: AGAGGGGAGCGAGTCCAGCAACCGCTCCTGTCGCAA...GGGGAACAGGGCAGCTCTAGAGCCAGCTGTGGGGGCTCTTAGGGAAGCAGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 90 bp | GCAGCTTCTCCTGAAGGCTGCGCTCGTTGCGACAGGAGCGGTTGCTaGACTCGCTCCCCTCTGACTCGGAGCCATCCTCAGAGGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AASPEGCARCDRSGC*TRSPLTRSHPQRLV Trigger: AACCAGCCTCTGAGGATGGCTCCGAGTCAGAGGGGAGCGAGTCCAGCAACCGCTCCTGTCGCAACGAGCGCAGCCTTCAGGAGAAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | AGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTTCCTCCCCTGGGCTGGAGATCTaGTCCCCTCCTCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RALSKQLPGTLPLCHPSSPGLEI*SPPHPP Trigger: TGGAGGATGAGGAGGGGACAAGATCTCCAGCCCAGG...GGAGGAAGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | TGGAGGAGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTATGATGAGGTCAGGGTaGGTTCGCAGCCAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WRRALSKQLPGTLPLCHPMMRSG*VRSQSR Trigger: CCTGGACTGGCTGCGAACCAACCCTGACCTCATCAT...AGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCTCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 90 bp | GGAGGATGGTGGCGGCGGCGACGACGTAGACAAGAGAGTCGGGAGTaGTTACGGCTCTTTCTGCCCTCATCAGCTTGGGGTACCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGWWRRRRRRQESRE*LRLFLPSSAWGTTV Trigger: CACTGTGGTACCCCAAGCTGATGAGGGCAGAAAGAGCCGTAAGCACTCCCGACTCTCTTGTCTACGTCGTCGCCGCCGCCACCATCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 90 bp | AAGTCTAGAACGTTCTTGACGTCCACACTGGCATGGGCAGCAGCTTaGAGGGCAGCCTGCATGGGCCCAGAGAGTGCACTGGGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSRTFLTSTLAWAAA*RAACMGPESALGLS Trigger: GGACAGCCCCAGTGCACTCTCTGGGCCCATGCAGGCTGCCCTGCAAGCTGCTGCCCATGCCAGTGTGGACGTCAAGAACGTTCTAGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | GTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCACTTCCTCACTGCCTTCAAGGAGACCTaGGACTTCGGAACACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VEGWPGVHGHSYAKHFLTAFKET*DFGTQS Trigger: GCTCTGTGTTCCGAAGTCCAAGGTCTCCTTGAAGGC...AGTGAGGAAGTGCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | GTGGAAGGCTGGCCGGGGGTCCATGGCCACTCCTACGCCAAGCACTTCCTCACTTCGGTGGCAAGCCATTaGTGCCCAATCCATCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VEGWPGVHGHSYAKHFLTSVASH*CPIHLL Trigger: AAGGAGATGGATTGGGCACAAATGGCTTGCCACCGA...AGTGAGGAAGTGCTTGGCGTAGGAGTGGCCATGGACCCCCGGCCAGCCTTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | GTGTACAGCCATCCAGCCCACACCCTAAGTGGGCCTGGAAGCTGGGCAGCAGCATCCTCCTCATCCTCGTaGGTTAGACCAAGGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VYSHPAHTLSGPGSWAAASSSSS*VRPRLG Trigger: ACCCAACCTTGGTCTAACCAACGAGGATGAGGAGGA...TGCTGCTGCCCAGCTTCCAGGCCCACTTAGGGTGTGGGCTGGATGGCTGTACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 90 bp | GTTGGGAGACCTCGAGCTGTAATCGTAGCTGAGCCATGTCTCTCATaGGCCTGTTCCGCCGAGCCTCCTCCTCTGCCATACGAAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGRPRAVIVAEPCLS*ACSAEPPPLPYETG Trigger: CCCAGTTTCGTATGGCAGAGGAGGAGGCTCGGCGGAACAGGCTCATGAGAGACATGGCTCAGCTACGATTACAGCTCGAGGTCTCCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 90 bp | TGTAGGCTCCCTTCCAGTTGGGAGACCTCGAGCTGTAATCGTAGCTaGGCCATGTCTCTCATGAGCCTGTTCCGCCGAGCCTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRLPSSWETSSCNRS*AMSLMSLFRRASSS Trigger: AGAGGAGGAGGCTCGGCGGAACAGGCTCATGAGAGACATGGCTCAGCTACGATTACAGCTCGAGGTCTCCCAACTGGAAGGGAGCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 90 bp | AAACCCTCACTCAGGTCACTGTCATCACCAGCTTTAGGAGGATGGTaGCGGCGGCGACGACGTAGACAAGAGAGTCGGGAGTGCTTACGG | + |
|
Preference number: 5 (lower is better) Translates to: KPSLRSLSSPALGGW*RRRRRRQESRECLR Trigger: CCGTAAGCACTCCCGACTCTCTTGTCTACGTCGTCGCCGCCGCCACCATCCTCCTAAAGCTGGTGATGACAGTGACCTGAGTGAGGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | CTCAGAAGTCCAGGAACTGCTCCAATGAAATGCAGACCCCCATGCCTGCCCCTGAGGGTACCCAGCTGGTaGAAGGGCATTCCAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSPGTAPMKCRPPCLPLRVPSW*KGIPIW Trigger: CCAGATTGGAATGCCCTTCAACCAGCTGGGTACCCT...CAGGGGCAGGCATGGGGGTCTGCATTTCATTGGAGCAGTTCCTGGACTTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | TGGTCAGAGGGGTGGCCTTGGCCTTCGCTCCCTCATTGGCACCCCTTATCCAGTTCCACGGAGCTACTTTaGGGCTGTAACAGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WSEGWPWPSLPHWHPLSSSTELL*GCNRLC Trigger: ACAAAGCCTGTTACAGCCCAAAAGTAGCTCCGTGGA...ACTGGATAAGGGGTGCCAATGAGGGAGCGAAGGCCAAGGCCACCCCTCTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 90 bp | AAAGCACTGAGCAGGGGCCGATCTGCGTCAAAGTTAAAGCGTCTATaGGCAGCCCGCAGAGGAGGTAGGTTACGCAGTGCCATGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KALSRGRSASKLKRL*AARRGGRLRSAMSS Trigger: AGAGGACATGGCACTGCGTAACCTACCTCCTCTGCGGGCTGCTCATAGACGCTTTAACTTTGACGCAGATCGGCCCCTGCTCAGTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 90 bp | TCAAAACCCTCACTCAGGTCACTGTCATCACCAGCTTTAGGAGGATaGTGGCGGCGGCGACGACGTAGACAAGAGAGTCGGGAGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SKPSLRSLSSPALGG*WRRRRRRQESRECL Trigger: TAAGCACTCCCGACTCTCTTGTCTACGTCGTCGCCGCCGCCACCATCCTCCTAAAGCTGGTGATGACAGTGACCTGAGTGAGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 90 bp | CCTTCCAGGCTCTTATCAGAGCCACTGTCTGAGCCGTCACTGGCCTaGGCAGAGTCATGGCTAGAGTCAGATTCAAAACCCTCACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSRLLSEPLSEPSLA*AESWLESDSKPSLR Trigger: CCTGAGTGAGGGTTTTGAATCTGACTCTAGCCATGACTCTGCCCAGGCCAGTGACGGCTCAGACAGTGGCTCTGATAAGAGCCTGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 90 bp | AAGTGGGAGCCAGTCGGAAGCAGCGCTTGGTCTGGAACATCTGGGTaGACATGGCTTGTAAATTGCTGGCAATGCTTGCTTCACTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KWEPVGSSAWSGTSG*TWLVNCWQCLLHWG Trigger: GCCCCAGTGAAGCAAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTTCCGACTGGCTCCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | TGGAGGAGGGCCCTAAGTAAGCAGCTCCCAGGGACCTTGCCCCTCTGCCACCCTAACTGGTGGTACATTTaGGCTGCCTTGTCATATAGT | + |
|
Preference number: 5 (lower is better) Translates to: WRRALSKQLPGTLPLCHPNWWYI*AALSYS Trigger: ACTATATGACAAGGCAGCCAAAATGTACCACCAGTT...AGGGTGGCAGAGGGGCAAGGTCCCTGGGAGCTGCTTACTTAGGGCCCTCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 90 bp | GGCTGTTCATTTCTGAGTCTGTCTCTGCATCAAAAGCAGTGCCCCTaGCTTCCAGGCTCTTATCAGAGCCACTGTCTGAGCCGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCSFLSLSLHQKQCP*LPGSYQSHCLSRHW Trigger: CCAGTGACGGCTCAGACAGTGGCTCTGATAAGAGCCTGGAAGGCAGGGGCACTGCTTTTGATGCAGAGACAGACTCAGAAATGAACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 90 bp | TCTGGATTGAACTGCAGGATGCTGCCTTGTAAGCGAGCAACAAAGTaGCCAAAGCTGCGGATACAGCAGATGCGCACCACCGACTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGLNCRMLPCKRATK*PKLRIQQMRTTDSS Trigger: AGAGGAGTCGGTGGTGCGCATCTGCTGTATCCGCAGCTTTGGGCACTTTGTTGCTCGCTTACAAGGCAGCATCCTGCAGTTCAATCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 90 bp | GTCCCCTCCTCATCCTCCATATCTTCCAGGTCTGACCGGGACTCCTaGCTGTTCATTTCTGAGTCTGTCTCTGCATCAAAAGCAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VPSSSSISSRSDRDS*LFISESVSASKAVP Trigger: GGGCACTGCTTTTGATGCAGAGACAGACTCAGAAATGAACAGCCAGGAGTCCCGGTCAGACCTGGAAGATATGGAGGATGAGGAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 90 bp | CAGGCATCGGTGGCAAGCCATTTGTGCCCAATCCATCTCCTTTCCTaGAGCAGATACTGGCTTCTTGAATCCCATGAGGGGATCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QASVASHLCPIHLLS*SRYWLLESHEGIGD Trigger: GTCACCGATCCCCTCATGGGATTCAAGAAGCCAGTATCTGCTTCAGGAAAGGAGATGGATTGGGCACAAATGGCTTGCCACCGATGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001451.11 ENSMUST00000192009.2 |
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| CDS GCA 90 bp | GCGCAAGTAGCAATACATGGCTTCCACGTTGTAATACTTGCTGCCTaGAAGGGTACCCAGCTGGTTGAAGGGCATTCCAATCTGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQVAIHGFHVVILAA*KGTQLVEGHSNLGS Trigger: GCTCCCCAGATTGGAATGCCCTTCAACCAGCTGGGTACCCTTGCAGGCAGCAAGTATTACAACGTGGAAGCCATGTATTGCTACTTGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001451.11 ENSMUST00000192009.2 |
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| CDS CCA 90 bp | CTGAAAGTGGGAGCCAGTCGGAAGCAGCGCTTGGTCTGGAACATCTaGGTGGACATGGCTTGTAAATTGCTGGCAATGCTTGCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LKVGASRKQRLVWNI*VDMACKLLAMLASL Trigger: CAGTGAAGCAAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTTCCGACTGGCTCCCACTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 90 bp | AGCAGGTTGCTGAAAGTGGGAGCCAGTCGGAAGCAGCGCTTGGTCTaGAACATCTGGGTGGACATGGCTTGTAAATTGCTGGCAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRLLKVGASRKQRLV*NIWVDMACKLLAML Trigger: AAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTTCCGACTGGCTCCCACTTTCAGCAACCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | CAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTGGGCCCAGGGGGCCATaGAGGGAATCTGGAACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QNWKCGNPNCSLVFPDLLGPRGP*RESGTS Trigger: AGAGGTTCCAGATTCCCTCAATGGCCCCCTGGGCCC...AAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | CTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTATGCCGACCTCTGGATaGAACTGCAGGATGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LFPGFPRPSFLVEGWKPAMPTSG*NCRMLP Trigger: AGGCAGCATCCTGCAGTTCAATCCAGAGGTCGGCAT...AGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 90 bp | CTTCCACGTTGTAATACTTGCTGCCTGCAAGGGTACCCAGCTGGTTaGAGGGCATTCCAATCTGGGGAGCCACTGACAAGGCTTGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRCNTCCLQGYPAG*RAFQSGEPLTRLDS Trigger: ACTATCAAGCCTTGTCAGTGGCTCCCCAGATTGGAATGCCCTTCAACCAGCTGGGTACCCTTGCAGGCAGCAAGTATTACAACGTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001451.11 ENSMUST00000192009.2 |
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| CDS-3UTR CAA 90 bp | CAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTGGTGTGGAGGACCTTaGCCTCGGGTTCGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QNWKCGNPNCSLVFPDLLWCGGP*PRVRCS Trigger: AGAGCAGCGAACCCGAGGCAAAGGTCCTCCACACCA...AAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | GCATATCCACTTTCACACTCCTCCTCATCCTCGTTGGTTAGACCAAGGTTGGGTAGGGTACCCAGCTGGTaGAAGGGCATTCCAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AYPLSHSSSSSLVRPRLGRVPSW*KGIPIW Trigger: CCAGATTGGAATGCCCTTCAACCAGCTGGGTACCCT...ACCCAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTGAAAGTGGATATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| CDS-3UTR CAA 90 bp | GCTGGAAGCCAGCTCCTCTTAAGCACAGCCAAAGCAGCTAGGCCAGTTGGGGCATACATTTTGGCTGCCTaGTCATATAGTCTCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSQLLLSTAKAARPVGAYILAA*SYSLLR Trigger: CCTCAAGAGACTATATGACAAGGCAGCCAAAATGTA...TGCCCCAACTGGCCTAGCTGCTTTGGCTGTGCTTAAGAGGAGCTGGCTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | CAGAATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTGCCCTCATCAGCTaGGGGTACCACAGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QNWKCGNPNCSLVFPDLLSALIS*GYHSGR Trigger: CCTCCCACTGTGGTACCCCAAGCTGATGAGGGCAGA...AAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | GGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTAATTGCTGGCAATGCTaGCTTCACTGGGGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GNVVTPTVPWFSQTFFLSNCWQC*LHWGPG Trigger: CCCTGGGCCCCAGTGAAGCAAGCATTGCCAGCAATT...ACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | GACAGGGCCCTTCTGTCATCTTTTCCTCTCAGAAGTCCAGGAACTGCTCCAATGAAGTCTAGAACGTTCTaGACGTCCACACTGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: DRALLSSFPLRSPGTAPMKSRTF*TSTLAW Trigger: CCATGCCAGTGTGGACGTCAAGAACGTTCTAGACTT...CATTGGAGCAGTTCCTGGACTTCTGAGAGGAAAAGATGACAGAAGGGCCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 90 bp | TTTTCTAGTGCTTCTTTTGACTCTGGTTCATCTGTGCCATCACTCTaGAAAGCTGAGACAGGGTTCTCGCCCTCTTCCAGTTCCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSASFDSGSSVPSL*KAETGFSPSSSSAC Trigger: GCAGGCGGAACTGGAAGAGGGCGAGAACCCTGTCTCAGCTTTTCAGAGTGATGGCACAGATGAACCAGAGTCAAAAGAAGCACTAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | AAAGCATATCCACTTTCACACTCCTCCTCATCCTCGTTGGTTAGACCAAGGTTGTCGGTGGCAAGCCATTaGTGCCCAATCCATCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KAYPLSHSSSSSLVRPRLSVASH*CPIHLL Trigger: AAGGAGATGGATTGGGCACAAATGGCTTGCCACCGA...CAACCTTGGTCTAACCAACGAGGATGAGGAGGAGTGTGAAAGTGGATATGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192009.2 |
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| CDS-3UTR CAA 90 bp | CTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAGTGGAAGGCTGGAAGCCAGCTGACATGGCTTGTAAATaGCTGGCAATGCTTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LFPGFPRPSFLVEGWKPADMACK*LAMLAS Trigger: TGAAGCAAGCATTGCCAGCAATTTACAAGCCATGTC...AGCTGGCTTCCAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | ATTGGAAATGTGGTAACCCCAACTGTTCCCTGGTTTTCCCAGACCTTCTTTCTTAACCTCTTAATGTCTTaGCATCGCTTTTTGCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: IGNVVTPTVPWFSQTFFLNLLMS*HRFLLG Trigger: CCCTAGCAAAAAGCGATGCAAAGACATTAAGAGGTT...AAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGGTTACCACATTTCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS-3UTR CAA 90 bp | ATTAAGCTTGAGTCTCAAGTCTGCCAGAATTGGAAATGTGGTAACCCCAACTGTTTTCTAGTGCTTCTTTaGACTCTGGTTCATCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: IKLESQVCQNWKCGNPNCFLVLL*TLVHLC Trigger: GCACAGATGAACCAGAGTCAAAAGAAGCACTAGAAA...ACAGTTGGGGTTACCACATTTCCAATTCTGGCAGACTTGAGACTCAAGCTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | CACAGCCCGGTAAAGCCGCTTGGTGTGGAGGACCTTTaGCTCGGGTTCGCTGCTCTCCCCTGGAGGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HSPVKPLGVEDL*LGFAALPWRRA Trigger: GGCCCTCCTCCAGGGGAGAGCAGCGAACCCGAGGCAAAGGTCCTCCACACCAAGCGGCTTTACCGGGCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CAA 72 bp | CCACAGCCCGGTAAAGCCGCTTGGTGTGGAGGACCTTaGCCTCGGGTTCGCTGCTCTCCCCTGGAGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PQPGKAAWCGGP*PRVRCSPLEEG Trigger: GCCCTCCTCCAGGGGAGAGCAGCGAACCCGAGGCAAAGGTCCTCCACACCAAGCGGCTTTACCGGGCTGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CAA 90 bp | CAGCCTCCACCACAGCCCGGTAAAGCCGCTTGGTGTGGAGGACCTTaGCCTCGGGTTCGCTGCTCTCCCCTGGAGGAGGGCCTTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QPPPQPGKAAWCGGP*PRVRCSPLEEGLGS Trigger: TGAGCCAAGGCCCTCCTCCAGGGGAGAGCAGCGAACCCGAGGCAAAGGTCCTCCACACCAAGCGGCTTTACCGGGCTGTGGTGGAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 72 bp | CCTGAAGGCTGCGCTCGTTGCGACAGGAGCGGTTGCTaGACTCGCTCCCCTCTGACTCGGAGCCATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PEGCARCDRSGC*TRSPLTRSHPQ Trigger: CTGAGGATGGCTCCGAGTCAGAGGGGAGCGAGTCCAGCAACCGCTCCTGTCGCAACGAGCGCAGCCTTCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | TCTCCTGAAGGCTGCGCTCGTTGCGACAGGAGCGGTTaGTGGACTCGCTCCCCTCTGACTCGGAGCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: SPEGCARCDRSG*WTRSPLTRSHP Trigger: AGGATGGCTCCGAGTCAGAGGGGAGCGAGTCCAGCAACCGCTCCTGTCGCAACGAGCGCAGCCTTCAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | GCCTGGGCCTGCTGCAGCAGGCTCTCCTGCTCAGACTaGGCAATGCTGACGAAGATGCCGACCTCTGGATTG | + |
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Preference number: 6 (lower is better) Translates to: AWACCSRLSCSD*AMLTKMPTSGL Trigger: CAATCCAGAGGTCGGCATCTTCGTCAGCATTGCTCAGTCTGAGCAGGAGAGCCTGCTGCAGCAGGCCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | TGGCGGCGGCGACGACGTAGACAAGAGAGTCGGGAGTaGTTACGGCTCTTTCTGCCCTCATCAGCTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: WRRRRRRQESRE*LRLFLPSSAWG Trigger: ACCCCAAGCTGATGAGGGCAGAAAGAGCCGTAAGCACTCCCGACTCTCTTGTCTACGTCGTCGCCGCCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 72 bp | CTCAGGTCACTGTCATCACCAGCTTTAGGAGGATGGTaGCGGCGGCGACGACGTAGACAAGAGAGTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRSLSSPALGGW*RRRRRRQESRE Trigger: CTCCCGACTCTCTTGTCTACGTCGTCGCCGCCGCCACCATCCTCCTAAAGCTGGTGATGACAGTGACCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | CTCGGTGTCCACACCAGCCAACTCATTCTGATAGCGTaGCAGATCCCCCAGGTACACCAGGCATCGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGVHTSQLILIA*QIPQVHQASVA Trigger: TGCCACCGATGCCTGGTGTACCTGGGGGATCTGTCACGCTATCAGAATGAGTTGGCTGGTGTGGACACCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001451.11 ENSMUST00000192009.2 |
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| CDS TCA 72 bp | AGCAGGGGCCGATCTGCGTCAAAGTTAAAGCGTCTATaGGCAGCCCGCAGAGGAGGTAGGTTACGCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRGRSASKLKRL*AARRGGRLRSA Trigger: GGCACTGCGTAACCTACCTCCTCTGCGGGCTGCTCATAGACGCTTTAACTTTGACGCAGATCGGCCCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | CCTCGAGCTGTAATCGTAGCTGAGCCATGTCTCTCATaGGCCTGTTCCGCCGAGCCTCCTCCTCTGCCATAC | + |
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Preference number: 6 (lower is better) Translates to: PRAVIVAEPCLS*ACSAEPPPLPY Trigger: GTATGGCAGAGGAGGAGGCTCGGCGGAACAGGCTCATGAGAGACATGGCTCAGCTACGATTACAGCTCGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | CCTTCCAGTTGGGAGACCTCGAGCTGTAATCGTAGCTaGGCCATGTCTCTCATGAGCCTGTTCCGCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: PSSWETSSCNRS*AMSLMSLFRRA Trigger: GGCTCGGCGGAACAGGCTCATGAGAGACATGGCTCAGCTACGATTACAGCTCGAGGTCTCCCAACTGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CAA 90 bp | AAGCAGCGCTTGGTCTGGAACATCTGGGTGGACATGGCTTGTAAATaGCTGGCAATGCTTGCTTCACTGGGGCCCAGGGGGCCATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KQRLVWNIWVDMACK*LAMLASLGPRGPLR Trigger: CCTCAATGGCCCCCTGGGCCCCAGTGAAGCAAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | AAAGGCTTGTCCATATCCCCGTTGACACAAGGCCTGTaGCTGGCCACACTGTTAGGTTCCGTGGTGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KGLSISPLTQGL*LATLLGSVVGC Trigger: GCAGCCCACCACGGAACCTAACAGTGTGGCCAGTCACAGGCCTTGTGTCAACGGGGATATGGACAAGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | TGCATGGGCCCAGAGAGTGCACTGGGGCTGTCCAAATaGAGGCCTGTGATAATGGTCACCATGCCACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: CMGPESALGLSK*RPVIMVTMPLG Trigger: CCCAAGTGGCATGGTGACCATTATCACAGGCCTTCATTTGGACAGCCCCAGTGCACTCTCTGGGCCCATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | GTAGACAAGAGAGTCGGGAGTGCTTACGGCTCTTTCTaGCCTCATCAGCTTGGGGTACCACAGTGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VDKRVGSAYGSF*PHQLGVPQWEA Trigger: AGCCTCCCACTGTGGTACCCCAAGCTGATGAGGGCAGAAAGAGCCGTAAGCACTCCCGACTCTCTTGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | TGGTCTGGAACATCTGGGTGGACATGGCTTGTAAATTaGTGGCAATGCTTGCTTCACTGGGGCCCAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: WSGTSGWTWLVN*WQCLLHWGPGG Trigger: GCCCCCTGGGCCCCAGTGAAGCAAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | ACTGGCTTCTTGAATCCCATGAGGGGATCGGTGACGTaGGTCCAGTCGATGCAGCACTGTAGTTCCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TGFLNPMRGSVT*VQSMQHCSSSW Trigger: CCAGCTGGAACTACAGTGCTGCATCGACTGGACTCACGTCACCGATCCCCTCATGGGATTCAAGAAGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001451.11 ENSMUST00000192009.2 |
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| CDS TCA 72 bp | TCTCCTTCCACTGCCTGTAGAAGTCTAGAACGTTCTTaGCGTCCACACTGGCATGGGCAGCAGCTTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPSTACRSLERS*RPHWHGQQLAG Trigger: CCCTGCAAGCTGCTGCCCATGCCAGTGTGGACGTCAAGAACGTTCTAGACTTCTACAGGCAGTGGAAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | AACTGCAGGATGCTGCCTTGTAAGCGAGCAACAAAGTaGCCAAAGCTGCGGATACAGCAGATGCGCACCACC | + |
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Preference number: 6 (lower is better) Translates to: NCRMLPCKRATK*PKLRIQQMRTT Trigger: GGTGGTGCGCATCTGCTGTATCCGCAGCTTTGGGCACTTTGTTGCTCGCTTACAAGGCAGCATCCTGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 72 bp | TCTGGAACATCTGGGTGGACATGGCTTGTAAATTGCTaGCAATGCTTGCTTCACTGGGGCCCAGGGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SGTSGWTWLVNC*QCLLHWGPGGH Trigger: ATGGCCCCCTGGGCCCCAGTGAAGCAAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CAA 72 bp | TTGGTCTGGAACATCTGGGTGGACATGGCTTGTAAATaGCTGGCAATGCTTGCTTCACTGGGGCCCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVWNIWVDMACK*LAMLASLGPRG Trigger: CCCCCTGGGCCCCAGTGAAGCAAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | AGAGTCCAGGCATCTGCATCCTGCCTCTTCAGTTTATaGCGCTCAAAGCTCTTTCCCACCTCCTTCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RVQASASCLFSL*RSKLFPTSFWQ Trigger: CTGCCAGAAGGAGGTGGGAAAGAGCTTTGAGCGGCATAAACTGAAGAGGCAGGATGCAGATGCCTGGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 72 bp | CTCTTATCAGAGCCACTGTCTGAGCCGTCACTGGCCTaGGCAGAGTCATGGCTAGAGTCAGATTCAAAACCC | + |
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Preference number: 6 (lower is better) Translates to: LLSEPLSEPSLA*AESWLESDSKP Trigger: GGGTTTTGAATCTGACTCTAGCCATGACTCTGCCCAGGCCAGTGACGGCTCAGACAGTGGCTCTGATAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 72 bp | GGAGCCAGTCGGAAGCAGCGCTTGGTCTGGAACATCTaGGTGGACATGGCTTGTAAATTGCTGGCAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: GASRKQRLVWNI*VDMACKLLAML Trigger: AAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTTCCGACTGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 72 bp | CTGAAAGTGGGAGCCAGTCGGAAGCAGCGCTTGGTCTaGAACATCTGGGTGGACATGGCTTGTAAATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LKVGASRKQRLV*NIWVDMACKLL Trigger: CAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTTCCGACTGGCTCCCACTTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | GCAATGCTGACGAAGATGCCGACCTCTGGATTGAACTaGAGGATGCTGCCTTGTAAGCGAGCAACAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: AMLTKMPTSGLN*RMLPCKRATKC Trigger: GCACTTTGTTGCTCGCTTACAAGGCAGCATCCTGCAGTTCAATCCAGAGGTCGGCATCTTCGTCAGCATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CCA 72 bp | CCAGTCGGAAGCAGCGCTTGGTCTGGAACATCTGGGTaGACATGGCTTGTAAATTGCTGGCAATGCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PVGSSAWSGTSG*TWLVNCWQCLL Trigger: AAGCAAGCATTGCCAGCAATTTACAAGCCATGTCCACCCAGATGTTCCAGACCAAGCGCTGCTTCCGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CAA 90 bp | CAGTGGGAGGCTCAGGCTCTGGCTCCTCTTTTTCTAGTGCTTCTTTaGACTCTGGTTCATCTGTGCCATCACTCTGAAAAGCTGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: QWEAQALAPLFLVLL*TLVHLCHHSEKLRQ Trigger: CTGTCTCAGCTTTTCAGAGTGATGGCACAGATGAACCAGAGTCAAAAGAAGCACTAGAAAAAGAGGAGCCAGAGCCTGAGCCTCCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS TCA 72 bp | GCTTCTTTTGACTCTGGTTCATCTGTGCCATCACTCTaGAAAGCTGAGACAGGGTTCTCGCCCTCTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ASFDSGSSVPSL*KAETGFSPSSS Trigger: ACTGGAAGAGGGCGAGAACCCTGTCTCAGCTTTTCAGAGTGATGGCACAGATGAACCAGAGTCAAAAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS GCA 72 bp | GCAATACATGGCTTCCACGTTGTAATACTTGCTGCCTaGAAGGGTACCCAGCTGGTTGAAGGGCATTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: AIHGFHVVILAA*KGTQLVEGHSN Trigger: ATTGGAATGCCCTTCAACCAGCTGGGTACCCTTGCAGGCAGCAAGTATTACAACGTGGAAGCCATGTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001451.11 ENSMUST00000192009.2 |
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| CDS CCA 72 bp | TCATCCTCCATATCTTCCAGGTCTGACCGGGACTCCTaGCTGTTCATTTCTGAGTCTGTCTCTGCATCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSSISSRSDRDS*LFISESVSASK Trigger: TTTTGATGCAGAGACAGACTCAGAAATGAACAGCCAGGAGTCCCGGTCAGACCTGGAAGATATGGAGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001451.11 |
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| CDS CAA 90 bp | CAAGGTGCTCCGACTGTGGATGTGCTTTTTGTTAGTCTTGATAAGTaGGATAACTTCATAGTATACCTTTCTCCACAGCAGTTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: QGAPTVDVLFVSLDK*DNFIVYLSPQQFLS Trigger: GCTGAGGAACTGCTGTGGAGAAAGGTATACTATGAAGTTATCCAACTTATCAAGACTAACAAAAAGCACATCCACAGTCGGAGCACCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001451.11 ENSMUST00000192009.2 |
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