RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030655

Ensembl transcript IDs: ENSMUST00000032891.15, ENSMUST00000178025.2, ENSMUST00000179331.9

Found 684 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCTTGCTCTCAGCCTGCTGGCCACCTCCACCATAGACAGCACCTaGAAACCCAGCCTCACCACCAGCTGTCCAGTCCACCAGGGGGTC +
Preference number: 1 (lower is better)
Translates to: LLALSLLATSTIDST*KPSLTTSCPVHQGV
Trigger: GACCCCCTGGTGGACTGGACAGCTGGTGGTGAGGCTGGGTTTGCAGGTGCTGTCTATGGTGGAGGTGGCCAGCAGGCTGAGAGCAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp CTCCATGGAGCAGTCGGGGTTGTCTCCAAGCCATGTTCCAGATACTaGCGGAGCTCACCAGCATGCTTCACTAGCAACCTGAGCAGTCGC +
Preference number: 1 (lower is better)
Translates to: LHGAVGVVSKPCSRY*RSSPACFTSNLSSR
Trigger: GCGACTGCTCAGGTTGCTAGTGAAGCATGCTGGTGAGCTCCGGCAGTATCTGGAACATGGCTTGGAGACAACCCCGACTGCTCCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp ACAGAACGCCTCTGCTGCAGCAGAGCGCCAACTTCCCCCTCTAGCTaGTCACACTGGCTGATGAGGTGTGCTTGCCCAGCATTCTGTAGA +
Preference number: 1 (lower is better)
Translates to: TERLCCSRAPTSPSS*SHWLMRCACPAFCR
Trigger: TCTACAGAATGCTGGGCAAGCACACCTCATCAGCCAGTGTGAGCAGCTAGAGGGGGAAGTTGGCGCTCTGCTGCAGCAGAGGCGTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp CCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCCGCTGCTCAATaGTTGCTTCAAGGGCTGCTAGTTTCTCCTGAACCGTCCCAATTG +
Preference number: 1 (lower is better)
Translates to: PGQDWHHLPTSAAAQ*LLQGLLVSPEPSQL
Trigger: CAATTGGGACGGTTCAGGAGAAACTAGCAGCCCTTGAAGCAAGCATTGAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp GAGTCTGACAGCTGGCTAATCTACCAGGGTGGGTCAACGGGGAGCTaGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATAGGTGCT +
Preference number: 1 (lower is better)
Translates to: ESDSWLIYQGGSTGS*GTGKRWEGVGSIGA
Trigger: AGCACCTATGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCACCCTGGTAGATTAGCCAGCTGTCAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CCA 90 bp GGGGGTGTGGCCTCCATTAACTCCTCCAACACTGCCTTCATCACGTaGAGGGGCCAATCCCTCCTTGACACATCCAGGCTAAGGCCAACT +
Preference number: 1 (lower is better)
Translates to: GGVASINSSNTAFIT*RGQSLLDTSRLRPT
Trigger: AGTTGGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCCCCTCCACGTGATGAAGGCAGTGTTGGAGGAGTTAATGGAGGCCACACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp CTCTGCTGCAGCAGAGCGCCAACTTCCCCCTCTAGCTGCTCACACTaGCTGATGAGGTGTGCTTGCCCAGCATTCTGTAGAAAGGCTGTT +
Preference number: 1 (lower is better)
Translates to: LCCSRAPTSPSSCSH*LMRCACPAFCRKAV
Trigger: AACAGCCTTTCTACAGAATGCTGGGCAAGCACACCTCATCAGCCAGTGTGAGCAGCTAGAGGGGGAAGTTGGCGCTCTGCTGCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TCTTCATGCTGCCACTGGAACATGGCAATGTGCAGTTGCACCCGCTaGAGGCTTGTCTTGCAGGAAGAAATGCTGGTTTCCAGCCTGCGC +
Preference number: 1 (lower is better)
Translates to: SSCCHWNMAMCSCTR*RLVLQEEMLVSSLR
Trigger: GCGCAGGCTGGAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp TGGTGCAAGATGACCAGAGTTCCTTGGCCAGGAGATTTGGGGGTGTaGCCTCCATTAACTCCTCCAACACTGCCTTCATCACGTGGAGGG +
Preference number: 1 (lower is better)
Translates to: WCKMTRVPWPGDLGV*PPLTPPTLPSSRGG
Trigger: CCCTCCACGTGATGAAGGCAGTGTTGGAGGAGTTAATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp ATAGGACTGTGTGACTCTCCACCACTCATCAGGAGTGGTGCAAGATaGCCAGAGTTCCTTGGCCAGGAGATTTGGGGGTGTGGCCTCCAT +
Preference number: 1 (lower is better)
Translates to: IGLCDSPPLIRSGAR*PEFLGQEIWGCGLH
Trigger: ATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCTGATGAGTGGTGGAGAGTCACACAGTCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp GTTGTCTCCAAGCCATGTTCCAGATACTGCCGGAGCTCACCAGCATaGTTCACTAGCAACCTGAGCAGTCGCAGGGTAGCCATCACTATC +
Preference number: 1 (lower is better)
Translates to: VVSKPCSRYCRSSPA*FTSNLSSRRVAITI
Trigger: GATAGTGATGGCTACCCTGCGACTGCTCAGGTTGCTAGTGAAGCATGCTGGTGAGCTCCGGCAGTATCTGGAACATGGCTTGGAGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp CTCTCCACCACTCATCAGGAGTGGTGCAAGATGACCAGAGTTCCTTaGCCAGGAGATTTGGGGGTGTGGCCTCCATTAACTCCTCCAACA +
Preference number: 1 (lower is better)
Translates to: LSTTHQEWCKMTRVP*PGDLGVWPPLTPPT
Trigger: TGTTGGAGGAGTTAATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCTGATGAGTGGTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp GCCTCCAAGAGTGTCAGCAGAGTCTCTCGGCCTCGCCGCATGATGTaGAGAACCTGCTCACAGGAAAGCCTAAAAACACCTTCTACTCCA +
Preference number: 1 (lower is better)
Translates to: ASKSVSRVSRPRRMM*RTCSQESLKTPSTP
Trigger: TGGAGTAGAAGGTGTTTTTAGGCTTTCCTGTGAGCAGGTTCTCCACATCATGCGGCGAGGCCGAGAGACTCTGCTGACACTCTTGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp CTCCTCCAACACTGCCTTCATCACGTGGAGGGGCCAATCCCTCCTTaGCACATCCAGGCTAAGGCCAACTGTTTTCAAAGCAGGACCAAT +
Preference number: 1 (lower is better)
Translates to: LLQHCLHHVEGPIPP*HIQAKANCFQSRTN
Trigger: ATTGGTCCTGCTTTGAAAACAGTTGGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCCCCTCCACGTGATGAAGGCAGTGTTGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TTTCTTCTTCATGCTGGTCAGGATTGCAGACCGAGGCGGGGTGACTaGCATGGCTTGTGGTCTGCTGATAAGGAGGTCTTCATGCTGCCA +
Preference number: 1 (lower is better)
Translates to: FLLHAGQDCRPRRGD*HGLWSADKEVFMLP
Trigger: TGGCAGCATGAAGACCTCCTTATCAGCAGACCACAAGCCATGTCAGTCACCCCGCCTCGGTCTGCAATCCTGACCAGCATGAAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp GCCATGGCTTTCAAGAGATGCTTCACATCTCCAAGCTGCCGGTTGTaGCCGGTGAGCACAGTCTTTACACTGTCGACTAGGCTCTGGATG +
Preference number: 1 (lower is better)
Translates to: AMAFKRCFTSPSCRL*PVSTVFTLSTRLWM
Trigger: CATCCAGAGCCTAGTCGACAGTGTAAAGACTGTGCTCACCGGTCACAACCGGCAGCTTGGAGATGTGAAGCATCTCTTGAAAGCCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp AGTGTCAGCAGAGTCTCTCGGCCTCGCCGCATGATGTGGAGAACCTaGTCACAGGAAAGCCTAAAAACACCTTCTACTCCAGTTACACCC +
Preference number: 1 (lower is better)
Translates to: SVSRVSRPRRMMWRT*SQESLKTPSTPVTP
Trigger: GGGTGTAACTGGAGTAGAAGGTGTTTTTAGGCTTTCCTGTGAGCAGGTTCTCCACATCATGCGGCGAGGCCGAGAGACTCTGCTGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp CTGCTGATAAGGAGGTCTTCATGCTGCCACTGGAACATGGCAATGTaGAGTTGCACCCGCTGCAGGCTTGTCTTGCAGGAAGAAATGCTG +
Preference number: 1 (lower is better)
Translates to: LLIRRSSCCHWNMAM*SCTRCRLVLQEEML
Trigger: CAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGACCTCCTTATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp CAGCTTCCCGTTGTTGCCATCGTTTGTAAAGACCAAACAATGGTGTaGCTCCATCCACCCACTGGATCAGCCCTGATCTCGTTCCCAGTG +
Preference number: 1 (lower is better)
Translates to: QLPVVAIVCKDQTMV*LHPPTGSALISFPV
Trigger: CACTGGGAACGAGATCAGGGCTGATCCAGTGGGTGGATGGAGCCACACCATTGTTTGGTCTTTACAAACGATGGCAACAACGGGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp ACTCTGTGCTCCGCAGCAGCCCGATTTCTTTCTCAGCTAACCTCCTaGCACGTTTGCAGCTGTTCTGTGGCAGAAAGACAATCTCCGTGT +
Preference number: 1 (lower is better)
Translates to: TLCSAAARFLSQLTS*HVCSCSVAERQSPC
Trigger: ACACGGAGATTGTCTTTCTGCCACAGAACAGCTGCAAACGTGTCAGGAGGTTAGCTGAGAAAGAAATCGGGCTGCTGCGGAGCACAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR TCA 90 bp TTAAAATGCTGGACTAAGTCCTGGGCAGTGGTTGTCTTTCCCAGCTaGACCTCACTGCACTGTGCCAGCAGTCTTGTCGCCAGTGACACA +
Preference number: 1 (lower is better)
Translates to: LKCWTKSWAVVVFPS*TSLHCASSLVASDT
Trigger: TGTGTCACTGGCGACAAGACTGCTGGCACAGTGCAGTGAGGTTCAGCTGGGAAAGACAACCACTGCCCAGGACTTAGTCCAGCATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp GCTGCTGTAACAAAACTCCCAGCCAGAGCTCATCCCAGAGTACAGTaGCCCTACGAAGCTCTGCCACAAGCATCTGGACCTGTAAAACCA +
Preference number: 1 (lower is better)
Translates to: AAVTKLPARAHPRVQ*PYEALPQASGPVKP
Trigger: TGGTTTTACAGGTCCAGATGCTTGTGGCAGAGCTTCGTAGGGTCACTGTACTCTGGGATGAGCTCTGGCTGGGAGTTTTGTTACAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TATCCTGAAACCACTTTTCATGAGGTGTCTCTGCAGGGGCAGCGGTaGTGCTCCGCACATGCTCCAAAGCAAACACGATGGGCTTCATCA +
Preference number: 1 (lower is better)
Translates to: YPETTFHEVSLQGQR*CSAHAPKQTRWASS
Trigger: TGATGAAGCCCATCGTGTTTGCTTTGGAGCATGTGCGGAGCATCACCGCTGCCCCTGCAGAGACACCTCATGAAAAGTGGTTTCAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp AAGACCAAACAATGGTGTGGCTCCATCCACCCACTGGATCAGCCCTaGTCTCGTTCCCAGTGGTGTTACAGAATAGTGGCGTGCATGGAA +
Preference number: 1 (lower is better)
Translates to: KTKQWCGSIHPLDQP*SRSQWCYRIVACME
Trigger: TTCCATGCACGCCACTATTCTGTAACACCACTGGGAACGAGATCAGGGCTGATCCAGTGGGTGGATGGAGCCACACCATTGTTTGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp CCTGTGGTACCAGGTGGCACTGCTTCAGTAACTGCACCAAGCAGGTaGCATTTCCACTCATACTACACAGCTCCTCTAGAAACCAGGCTC +
Preference number: 1 (lower is better)
Translates to: PVVPGGTASVTAPSR*HFHSYYTAPLETRL
Trigger: GAGCCTGGTTTCTAGAGGAGCTGTGTAGTATGAGTGGAAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTGCCACCTGGTACCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp CTTTCAAGAGATGCTTCACATCTCCAAGCTGCCGGTTGTGACCGGTaGGCACAGTCTTTACACTGTCGACTAGGCTCTGGATGGTCTCAC +
Preference number: 1 (lower is better)
Translates to: LSRDASHLQAAGCDR*AQSLHCRLGSGWSH
Trigger: GTGAGACCATCCAGAGCCTAGTCGACAGTGTAAAGACTGTGCTCACCGGTCACAACCGGCAGCTTGGAGATGTGAAGCATCTCTTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp GGCATCACCATAGTTATCCTGAAACCACTTTTCATGAGGTGTCTCTaGAGGGGCAGCGGTGATGCTCCGCACATGCTCCAAAGCAAACAC +
Preference number: 1 (lower is better)
Translates to: GITIVILKPLFMRCL*RGSGDAPHMLQSKH
Trigger: GTGTTTGCTTTGGAGCATGTGCGGAGCATCACCGCTGCCCCTGCAGAGACACCTCATGAAAAGTGGTTTCAGGATAACTATGGTGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp ATAAGGAGGTCTTCATGCTGCCACTGGAACATGGCAATGTGCAGTTaGACCCGCTGCAGGCTTGTCTTGCAGGAAGAAATGCTGGTTTCC +
Preference number: 1 (lower is better)
Translates to: IRRSSCCHWNMAMCS*TRCRLVLQEEMLVS
Trigger: GGAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGACCTCCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp AGCGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATaGAGTTCCAAGTCACTCTGTGCTCCGCAGCAGCCCGATTTCTTT +
Preference number: 1 (lower is better)
Translates to: SGVCFPGLYTQGQVE*SSKSLCAPQQPDFF
Trigger: AAAGAAATCGGGCTGCTGCGGAGCACAGAGTGACTTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CCA 90 bp GATGCTTCCACTGGGTTGGGAATATCCAAGTCCTGTGGTACCAGGTaGCACTGCTTCAGTAACTGCACCAAGCAGGTGACATTTCCACTC +
Preference number: 1 (lower is better)
Translates to: DASTGLGISKSCGTR*HCFSNCTKQVTFPL
Trigger: GAGTGGAAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTGCCACCTGGTACCACAGGACTTGGATATTCCCAACCCAGTGGAAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TCCAGCAGTTTGCCCTGCAGTTTTTCAACATCTGTGAGCTGCTCCTaGAGGCTTAGGTATTCATCTAAGCTGCTGTCCAGCTTGGGAAGC +
Preference number: 1 (lower is better)
Translates to: SSSLPCSFSTSVSCS*RLRYSSKLLSSLGS
Trigger: GCTTCCCAAGCTGGACAGCAGCTTAGATGAATACCTAAGCCTGCAGGAGCAGCTCACAGATGTTGAAAAACTGCAGGGCAAACTGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TCCTCTAGAAACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTaGTCTCCAGCACTTGAAGCTGCACCTTCCATCATAAGGTTACGC +
Preference number: 1 (lower is better)
Translates to: SSRNQAPSLDVRSTS*SPALEAAPSIIRLR
Trigger: GCGTAACCTTATGATGGAAGGTGCAGCTTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTTTCTAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp TGTGGGGAATCTTGGGCCACGCGGCAAAGGAGGTTACAAATACTCTaGCGCACATACACTTCAGGGTGGTTTAAGCGTGAGAAAAGCTGT +
Preference number: 1 (lower is better)
Translates to: CGESWATRQRRLQIL*RTYTSGWFKREKSC
Trigger: ACAGCTTTTCTCACGCTTAAACCACCCTGAAGTGTATGTGCGCCAGAGTATTTGTAACCTCCTTTGCCGCGTGGCCCAAGATTCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp TTCCACTCATACTACACAGCTCCTCTAGAAACCAGGCTCCATCTCTaGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAAGCTGCAC +
Preference number: 1 (lower is better)
Translates to: FHSYYTAPLETRLHL*MSDQPAALQHLKLH
Trigger: GTGCAGCTTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTTTCTAGAGGAGCTGTGTAGTATGAGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp CTATTGTTGCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTaGCACCACCTGCCCACTTCAGCCGCTGCTCAATGCTTGCTTCAA +
Preference number: 1 (lower is better)
Translates to: LLLLQNLVVLVPGQD*HHLPTSAAAQCLLQ
Trigger: TTGAAGCAAGCATTGAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGCAACAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp ACCCAACCAGTACTGTTGCCGAGCAACAAATGTTTCTCAAGAATCTaGATGCAACAACTCTTCCGTGGCTGTGAGTTCTTCGCGGCCCCA +
Preference number: 1 (lower is better)
Translates to: TQPVLLPSNKCFSRI*MQQLFRGCEFFAAP
Trigger: TGGGGCCGCGAAGAACTCACAGCCACGGAAGAGTTGTTGCATTCAGATTCTTGAGAAACATTTGTTGCTCGGCAACAGTACTGGTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR TCA 90 bp GGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTaGAGCTGCACCTTCCATCATAAGGTTACGCCTTGTAAGAGTACA +
Preference number: 1 (lower is better)
Translates to: GSISGCQINQLLSST*SCTFHHKVTPCKST
Trigger: TGTACTCTTACAAGGCGTAACCTTATGATGGAAGGTGCAGCTTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp ATGTGGCTTTGGATGCCTGAGGCTGAGTTGATTCTGGTGGATGTCTaGCCTCGCTTAACCAGACTCATCTACTGTCTTGCCATTCACACC +
Preference number: 1 (lower is better)
Translates to: MWLWMPEAELILVDV*PRLTRLIYCLAIHT
Trigger: GGTGTGAATGGCAAGACAGTAGATGAGTCTGGTTAAGCGAGGTCAGACATCCACCAGAATCAACTCAGCCTCAGGCATCCAAAGCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp CGCACATGCTCCAAAGCAAACACGATGGGCTTCATCAGTGCTGTGTaGTTCTCTCGCATGATGGCAATTTTCTCTTCTTTGCGCAAGGTG +
Preference number: 1 (lower is better)
Translates to: RTCSKANTMGFISAV*FSRMMAIFSSLRKV
Trigger: CACCTTGCGCAAAGAAGAGAAAATTGCCATCATGCGAGAGAAGCACACAGCACTGATGAAGCCCATCGTGTTTGCTTTGGAGCATGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp GATGCTCCGCACATGCTCCAAAGCAAACACGATGGGCTTCATCAGTaGTGTGTGCTTCTCTCGCATGATGGCAATTTTCTCTTCTTTGCG +
Preference number: 1 (lower is better)
Translates to: DAPHMLQSKHDGLHQ*CVLLSHDGNFLFFA
Trigger: CGCAAAGAAGAGAAAATTGCCATCATGCGAGAGAAGCACACAGCACTGATGAAGCCCATCGTGTTTGCTTTGGAGCATGTGCGGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp GGAATATCCAAGTCCTGTGGTACCAGGTGGCACTGCTTCAGTAACTaGACCAAGCAGGTGACATTTCCACTCATACTACACAGCTCCTCT +
Preference number: 1 (lower is better)
Translates to: GISKSCGTRWHCFSN*TKQVTFPLILHSSS
Trigger: AGAGGAGCTGTGTAGTATGAGTGGAAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTGCCACCTGGTACCACAGGACTTGGATATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TCCACTGGGTTGGGAATATCCAAGTCCTGTGGTACCAGGTGGCACTaGTTCAGTAACTGCACCAAGCAGGTGACATTTCCACTCATACTA +
Preference number: 1 (lower is better)
Translates to: STGLGISKSCGTRWH*FSNCTKQVTFPLIL
Trigger: TAGTATGAGTGGAAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTGCCACCTGGTACCACAGGACTTGGATATTCCCAACCCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TCTGGTGGATGTCTGACCTCGCTTAACCAGACTCATCTACTGTCTTaGCATTCACACCCAAGCTGTCCAACCTTCATACAGCTGAGCCAA +
Preference number: 1 (lower is better)
Translates to: SGGCLTSLNQTHLLS*HSHPSCPTFIQLSQ
Trigger: TTGGCTCAGCTGTATGAAGGTTGGACAGCTTGGGTGTGAATGGCAAGACAGTAGATGAGTCTGGTTAAGCGAGGTCAGACATCCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp ACTAGCCAATGCTGCCCAAGATTTGGCTACTTCAGGTGCCTGCACTaGAGACAGGTGATACAACTGTCCCAAAATGAAGTCAGGTTCTCC +
Preference number: 1 (lower is better)
Translates to: TSQCCPRFGYFRCLH*RQVIQLSQNEVRFS
Trigger: GGAGAACCTGACTTCATTTTGGGACAGTTGTATCACCTGTCTTCAGTGCAGGCACCTGAAGTAGCCAAATCTTGGGCAGCATTGGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp TCATCCCAGAGTACAGTGACCCTACGAAGCTCTGCCACAAGCATCTaGACCTGTAAAACCATCGTTGGGTTGGCAGAGGAAAGTTTATCT +
Preference number: 1 (lower is better)
Translates to: SSQSTVTLRSSATSI*TCKTIVGLAEESLS
Trigger: AGATAAACTTTCCTCTGCCAACCCAACGATGGTTTTACAGGTCCAGATGCTTGTGGCAGAGCTTCGTAGGGTCACTGTACTCTGGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTaGGAATATCCAAGTCCTGTGGTACCAGGTGGCACTGCTTCAGTA +
Preference number: 1 (lower is better)
Translates to: ILHWLNEQPQMLPLG*EYPSPVVPGGTASV
Trigger: TACTGAAGCAGTGCCACCTGGTACCACAGGACTTGGATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp CAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCTTGGTTTaGGAGTCCTATCAAGAGCTGTCTTACAAAGTCAGCTGTAAAGGC +
Preference number: 1 (lower is better)
Translates to: QGTDKATQCESEGLV*ESYQELSYKVSCKG
Trigger: GCCTTTACAGCTGACTTTGTAAGACAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp ACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCTTaGTTTGGGAGTCCTATCAAGAGCTGTCTTACAAAGTCAGCTGTA +
Preference number: 1 (lower is better)
Translates to: TPRALIKLHNVSPRA*FGSPIKSCLTKSAV
Trigger: TACAGCTGACTTTGTAAGACAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp GCTGCCCAAGATTTGGCTACTTCAGGTGCCTGCACTGAAGACAGGTaGTACAACTGTCCCAAAATGAAGTCAGGTTCTCCAACTCCAATA +
Preference number: 1 (lower is better)
Translates to: AAQDLATSGACTEDR*YNCPKMKSGSPTPI
Trigger: TATTGGAGTTGGAGAACCTGACTTCATTTTGGGACAGTTGTATCACCTGTCTTCAGTGCAGGCACCTGAAGTAGCCAAATCTTGGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp CTGCTAGTTTCTCCTGAACCGTCCCAATTGAAGTCTCAATCTGACTaGGAGCATGCAGTTTCTTCTTCATGCTGGTCAGGATTGCAGACC +
Preference number: 1 (lower is better)
Translates to: LLVSPEPSQLKSQSD*EHAVSSSCWSGLQT
Trigger: GGTCTGCAATCCTGACCAGCATGAAGAAGAAACTGCATGCTCTCAGTCAGATTGAGACTTCAATTGGGACGGTTCAGGAGAAACTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TCTCCAACTCCAATATGCACTGTAGACTCACTCTCAATCCGAGGGTaGTCCTCTCCAACTGTATTAGCAGATGGTAGCTCTATTAGAGCG +
Preference number: 1 (lower is better)
Translates to: SPTPICTVDSLSIRG*SSPTVLADGSSIRA
Trigger: CGCTCTAATAGAGCTACCATCTGCTAATACAGTTGGAGAGGAGCACCCTCGGATTGAGAGTGAGTCTACAGTGCATATTGGAGTTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TCGATGTTTCTGAAATATGGCTTTTGGATACTGCAGAGCAACTGTTaGATAGTGATGCAGCTGTTCCAGACAGCCACGGAGCACAGAACG +
Preference number: 1 (lower is better)
Translates to: SMFLKYGFWILQSNC*IVMQLFQTATEHRT
Trigger: CGTTCTGTGCTCCGTGGCTGTCTGGAACAGCTGCATCACTATGCAACAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGAAACATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp CGGCAAAGGAGGTTACAAATACTCTGGCGCACATACACTTCAGGGTaGTTTAAGCGTGAGAAAAGCTGTGGAATAATGCCTCTCCATGGA +
Preference number: 1 (lower is better)
Translates to: RQRRLQILWRTYTSG*FKREKSCGIMPLHG
Trigger: TCCATGGAGAGGCATTATTCCACAGCTTTTCTCACGCTTAAACCACCCTGAAGTGTATGTGCGCCAGAGTATTTGTAACCTCCTTTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp ATGGTTCCTACTATTGCAGGATATAATATGAGGTGTGGGGAATCTTaGGCCACGCGGCAAAGGAGGTTACAAATACTCTGGCGCACATAC +
Preference number: 1 (lower is better)
Translates to: MVPTIAGYNMRCGES*ATRQRRLQILWRTY
Trigger: GTATGTGCGCCAGAGTATTTGTAACCTCCTTTGCCGCGTGGCCCAAGATTCCCCACACCTCATATTATATCCTGCAATAGTAGGAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp GCAAAGTACAGTGACTGCCTCCTCTTGAATCTTTGCACAGCATTGTaGTGCTCACCAGCACTATTAGGAATCTACCTACCCTATCGAGGT +
Preference number: 1 (lower is better)
Translates to: AKYSDCLLLNLCTAL*CSPALLGIYLPYRG
Trigger: ACCTCGATAGGGTAGGTAGATTCCTAATAGTGCTGGTGAGCATCACAATGCTGTGCAAAGATTCAAGAGGAGGCAGTCACTGTACTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 90 bp GGCTTGGTTTTAGTTGGTAAGATGGTGATAGTTCCACCCACACTGTaGATTGTCACAGTATCTCTGGCTGAGACTTCTCCAGGAAGTGCA +
Preference number: 1 (lower is better)
Translates to: GLVLVGKMVIVPPTL*IVTVSLAETSPGSA
Trigger: TGCACTTCCTGGAGAAGTCTCAGCCAGAGATACTGTGACAATTCACAGTGTGGGTGGAACTATCACCATCTTACCAACTAAAACCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp AACCAGTACTGTTGCCGAGCAACAAATGTTTCTCAAGAATCTGAATaGAACAACTCTTCCGTGGCTGTGAGTTCTTCGCGGCCCCAATTT +
Preference number: 1 (lower is better)
Translates to: NQYCCRATNVSQESE*NNSSVAVSSSRPQF
Trigger: AAATTGGGGCCGCGAAGAACTCACAGCCACGGAAGAGTTGTTGCATTCAGATTCTTGAGAAACATTTGTTGCTCGGCAACAGTACTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR GCA 90 bp AAACAATGTTGGTCTTCGTCTGCGTCTGAACACAGGAAACAAAGATaGTTCAGGGTGGTAGTTCTAAGGGCTAGGATGTACGTAGCTCAG +
Preference number: 1 (lower is better)
Translates to: KQCWSSSASEHRKQR*FRVVVLRARMYVAQ
Trigger: CTGAGCTACGTACATCCTAGCCCTTAGAACTACCACCCTGAAGCATCTTTGTTTCCTGTGTTCAGACGCAGACGAAGACCAACATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CCA 90 bp CCGCTGAAGGGTCATTTCAGTAGCAGTAATGAACTGACACACTGTTaGAGGTGGCTGAGGAGCATACTGCATTTCATACTTCCTATAGAG +
Preference number: 1 (lower is better)
Translates to: PLKGHFSSSNELTHC*RWLRSILHFILPIE
Trigger: CTCTATAGGAAGTATGAAATGCAGTATGCTCCTCAGCCACCTCCAACAGTGTGTCAGTTCATTACTGCTACTGAAATGACCCTTCAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp ATTCTATTTCTTCCAGCAGTTTGCCCTGCAGTTTTTCAACATCTGTaGGCTGCTCCTGCAGGCTTAGGTATTCATCTAAGCTGCTGTCCA +
Preference number: 1 (lower is better)
Translates to: ILFLPAVCPAVFQHL*AAPAGLGIHLSCCP
Trigger: TGGACAGCAGCTTAGATGAATACCTAAGCCTGCAGGAGCAGCTCACAGATGTTGAAAAACTGCAGGGCAAACTGCTGGAAGAAATAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TGGATGGTCTCACAGACAGTCTCTATCTGCTGCTCCTTCTCTGTTTaGACAGCTCTTTGGGTGGACATATCCTGGGTCAATTGTTTATGT +
Preference number: 1 (lower is better)
Translates to: WMVSQTVSICCSFSV*TALWVDISWVNCLC
Trigger: ACATAAACAATTGACCCAGGATATGTCCACCCAAAGAGCTGTTCAAACAGAGAAGGAGCAGCAGATAGAGACTGTCTGTGAGACCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp GATGCTCTTGCCAGTTCCTGGGATGGTGCTTGGTGGAGTATCTGCTaGTGTAGCCAGATTTTTCTGAATCAGCTTTTTAGCATTCTGAGA +
Preference number: 1 (lower is better)
Translates to: DALASSWDGAWWSIC*CSQIFLNQLFSILR
Trigger: TCTCAGAATGCTAAAAAGCTGATTCAGAAAAATCTGGCTACATCAGCAGATACTCCACCAAGCACCATCCCAGGAACTGGCAAGAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp GAAGCTCTGCCACAAGCATCTGGACCTGTAAAACCATCGTTGGGTTaGCAGAGGAAAGTTTATCTACAATTTTGCTGTAGCAATCCTGCA +
Preference number: 1 (lower is better)
Translates to: EALPQASGPVKPSLG*QRKVYLQFCCSNPA
Trigger: TGCAGGATTGCTACAGCAAAATTGTAGATAAACTTTCCTCTGCCAACCCAACGATGGTTTTACAGGTCCAGATGCTTGTGGCAGAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TCTACAGAAACTTTGCTTTCAGCACCAAAGTCCTTTGCCTCTACCTaGGCAATGATGTCAACACCCAGGGCACTGATAAAGCTACACAAT +
Preference number: 1 (lower is better)
Translates to: STETLLSAPKSFAST*AMMSTPRALIKLHN
Trigger: ATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATTGCTCAGGTAGAGGCAAAGGACTTTGGTGCTGAAAGCAAAGTTTCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TCCAGGCTTAAGGCTTCGGCAGTTCTTGTTCGTAGACTTTCAAAATaGATGATATTGCTGCAGAGAAAAGTGACCTGGTTTGCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: SRLKASAVLVRRLSK*MILLQRKVTWFALW
Trigger: CCAGAGAGCAAACCAGGTCACTTTTCTCTGCAGCAATATCATTCATTTTGAAAGTCTACGAACAAGAACTGCCGAAGCCTTAAGCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp CAACATGTTCTTGACTTCGAACCTGACCCATGGCCTGGACTAGTGTaGACAAAACCGTCTGAATGTTGTCTTGCCATGATTTGTATTCAG +
Preference number: 1 (lower is better)
Translates to: QHVLDFEPDPWPGLV*TKPSECCLAMICIQ
Trigger: CTGAATACAAATCATGGCAAGACAACATTCAGACGGTTTTGTTCACACTAGTCCAGGCCATGGGTCAGGTTCGAAGTCAAGAACATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp ACACAGATCATCTACAGAAACTTTGCTTTCAGCACCAAAGTCCTTTaGCTCTACCTGAGCAATGATGTCAACACCCAGGGCACTGATAAA +
Preference number: 1 (lower is better)
Translates to: TQIIYRNFAFSTKVL*LYLSNDVNTQGTDK
Trigger: TTTATCAGTGCCCTGGGTGTTGACATCATTGCTCAGGTAGAGGCAAAGGACTTTGGTGCTGAAAGCAAAGTTTCTGTAGATGATCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp CTTCCATCCAGGCCTTCCACTGTTCAATTCGATGTTTCTGAAATATaGCTTTTGGATACTGCAGAGCAACTGTTGCATAGTGATGCAGCT +
Preference number: 1 (lower is better)
Translates to: LPSRPSTVQFDVSEI*LLDTAEQLLHSDAA
Trigger: AGCTGCATCACTATGCAACAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGAAACATCGAATTGAACAGTGGAAGGCCTGGATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TCGGAAACTGAACTGTTGAACTGTGACGCAAATGAACACATCTGCTaGCACCGTTTGATTAGTTCAAATAAGGCAGCATCCAGGCTTAAG +
Preference number: 1 (lower is better)
Translates to: SETELLNCDANEHIC*HRLISSNKAASRLK
Trigger: CTTAAGCCTGGATGCTGCCTTATTTGAACTAATCAAACGGTGTCAGCAGATGTGTTCATTTGCGTCACAGTTCAACAGTTCAGTTTCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp GCATTTTCATCAAGTTCAGAAAGCCAAGGGCAGCTTGATATTAACTaGCGCCAGATAACATCGACCATGTCATCGTCCTCATTATCTTCA +
Preference number: 1 (lower is better)
Translates to: AFSSSSESQGQLDIN*RQITSTMSSSSLSS
Trigger: TGAAGATAATGAGGACGATGACATGGTCGATGTTATCTGGCGGCAGTTAATATCAAGCTGCCCTTGGCTTTCTGAACTTGATGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp AAGGGTCATTTCAGTAGCAGTAATGAACTGACACACTGTTGGAGGTaGCTGAGGAGCATACTGCATTTCATACTTCCTATAGAGTTCTTG +
Preference number: 1 (lower is better)
Translates to: KGHFSSSNELTHCWR*LRSILHFILPIEFL
Trigger: CAAGAACTCTATAGGAAGTATGAAATGCAGTATGCTCCTCAGCCACCTCCAACAGTGTGTCAGTTCATTACTGCTACTGAAATGACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp AGAGGAACTCCATCAGTAGTCTGCTCGATCAGACTATCTAGTTCATaGAGCATACTTTCTAAGGTGCACTCCCCCTTCATTAAACATCTA +
Preference number: 1 (lower is better)
Translates to: RGTPSVVCSIRLSSS*SILSKVHSPFIKHL
Trigger: TAGATGTTTAATGAAGGGGGAGTGCACCTTAGAAAGTATGCTCCATGAACTAGATAGTCTGATCGAGCAGACTACTGATGGAGTTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp TGGCAACATCAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATaGCTGTGTTTCGCAAGTAGGCTTGAAGTGACTCAACCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: WQHQYNEHEFLLQVP*LCFASRLEVTQPES
Trigger: AGACTCTGGTTGAGTCACTTCAAGCCTACTTGCGAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTGATGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp AGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTaGCGAGCAACAAATGTTTCTCAAGAATCTGAATGCAACAACTCT +
Preference number: 1 (lower is better)
Translates to: SIAFWYLTGQPNQYC*RATNVSQESECNNS
Trigger: AGAGTTGTTGCATTCAGATTCTTGAGAAACATTTGTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR GCA 90 bp GCTCTGTTCATCACCAACTGTGAGAATTTCCCTACCTGGATATTGTaGTCCACAGCTTTCTTACACAGATCATCTACAGAAACTTTGCTT +
Preference number: 1 (lower is better)
Translates to: ALFITNCENFPTWIL*STAFLHRSSTETLL
Trigger: AAGCAAAGTTTCTGTAGATGATCTGTGTAAGAAAGCTGTGGAGCACAATATCCAGGTAGGGAAATTCTCACAGTTGGTGATGAACAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp TGGCAGGATTTGATGGCGTCTTTAGTTTTTCAAGGGCATTGTCAATaGCATCACCATAGTTATCCTGAAACCACTTTTCATGAGGTGTCT +
Preference number: 1 (lower is better)
Translates to: WQDLMASLVFQGHCQ*HHHSYPETTFHEVS
Trigger: AGACACCTCATGAAAAGTGGTTTCAGGATAACTATGGTGATGCCATTGACAATGCCCTTGAAAAACTAAAGACGCCATCAAATCCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp AACACTGTAGCTCTGTTCATCACCAACTGTGAGAATTTCCCTACCTaGATATTGTGCTCCACAGCTTTCTTACACAGATCATCTACAGAA +
Preference number: 1 (lower is better)
Translates to: NTVALFITNCENFPT*ILCSTAFLHRSSTE
Trigger: TTCTGTAGATGATCTGTGTAAGAAAGCTGTGGAGCACAATATCCAGGTAGGGAAATTCTCACAGTTGGTGATGAACAGAGCTACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TTTCACTTGAGGCTCCTTAAAGAAGTTAAACCTGGAAAGGCTATTTaGACAGGAAGCCAAGGGTTTTATCCAGAGTGCAGTGATCAACAA +
Preference number: 1 (lower is better)
Translates to: FHLRLLKEVKPGKAI*TGSQGFYPECSDQQ
Trigger: TTGTTGATCACTGCACTCTGGATAAAACCCTTGGCTTCCTGTTCAAATAGCCTTTCCAGGTTTAACTTCTTTAAGGAGCCTCAAGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 90 bp GGAGGACTTCCTCCTTCACATTCGGAAACCAGCAGTTCTTCTCCTTaGATATTTCCAAGTAAAGTTGGGATTGCAGAGGAATACTTATTT +
Preference number: 1 (lower is better)
Translates to: GGLPPSHSETSSSSP*IFPSKVGIAEEYLF
Trigger: AAATAAGTATTCCTCTGCAATCCCAACTTTACTTGGAAATATTCAAGGAGAAGAACTGCTGGTTTCCGAATGTGAAGGAGGAAGTCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TTTGAATTTAATTCCTGCAGAGATGTATATACTCCATTGGCTAAATaGACAGCCTCAGATGCTTCCACTGGGTTGGGAATATCCAAGTCC +
Preference number: 1 (lower is better)
Translates to: FEFNSCRDVYTPLAK*TASDASTGLGISKS
Trigger: GGACTTGGATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTATATACATCTCTGCAGGAATTAAATTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp GGAGTGCACATGAAATCAGTGTCTGTTAGACTCATTACGTTTGGATaGACAGTGACAATTCAGGAAACTGTACATGATAGAGTCACAGAT +
Preference number: 1 (lower is better)
Translates to: GVHMKSVSVRLITFG*TVTIQETVHDRVTD
Trigger: ATCTGTGACTCTATCATGTACAGTTTCCTGAATTGTCACTGTGCATCCAAACGTAATGAGTCTAACAGACACTGATTTCATGTGCACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR GCA 90 bp TTTCAAACGTTCCACTTGTCTAATAAGTCTGCTGTTTATGTCTGCTaGATACCGCTGAAGGGTCATTTCAGTAGCAGTAATGAACTGACA +
Preference number: 1 (lower is better)
Translates to: FQTFHLSNKSAVYVC*IPLKGHFSSSNELT
Trigger: TGTCAGTTCATTACTGCTACTGAAATGACCCTTCAGCGGTATGCAGCAGACATAAACAGCAGACTTATTAGACAAGTGGAACGTTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 90 bp TTGTTTCAAACGTTCCACTTGTCTAATAAGTCTGCTGTTTATGTCTaGTGCATACCGCTGAAGGGTCATTTCAGTAGCAGTAATGAACTG +
Preference number: 1 (lower is better)
Translates to: LFQTFHLSNKSAVYV*CIPLKGHFSSSNEL
Trigger: CAGTTCATTACTGCTACTGAAATGACCCTTCAGCGGTATGCAGCAGACATAAACAGCAGACTTATTAGACAAGTGGAACGTTTGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 90 bp AGTCCATTTCTGAAATTCATACAGCATAGCCTTTTGGTACTTAACTaGTCAACCCAACCAGTACTGTTGCCGAGCAACAAATGTTTCTCA +
Preference number: 1 (lower is better)
Translates to: SPFLKFIQHSLLVLN*STQPVLLPSNKCFS
Trigger: TGAGAAACATTTGTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGAATTTCAGAAATGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CCA 90 bp ATCTTGTTTAGCTTCTCAACTAATAAGCCAAAAGCAGTTTCAACTTaGGCAAACATGCCATCAAATGCTACCAAAAGCATCTGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: ILFSFSTNKPKAVST*ANMPSNATKSIWPA
Trigger: AGCTGGCCAGATGCTTTTGGTAGCATTTGATGGCATGTTTGCCCAAGTTGAAACTGCTTTTGGCTTATTAGTTGAGAAGCTAAACAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp AATATGGTAACAACGTGGAGACAAAAGTTTATGAAGTGTAAGGATTaGAATAAAAGTGAGTCTGACAGCTGGCTAATCTACCAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: NMVTTWRQKFMKCKD*NKSESDSWLIYQGG
Trigger: CCCACCCTGGTAGATTAGCCAGCTGTCAGACTCACTTTTATTTCAATCCTTACACTTCATAAACTTTTGTCTCCACGTTGTTACCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR TCA 90 bp TTTATAAATTCAACATATAAAACAATGTTGGTCTTCGTCTGCGTCTaGACACAGGAAACAAAGATGCTTCAGGGTGGTAGTTCTAAGGGC +
Preference number: 1 (lower is better)
Translates to: FINSTYKTMLVFVCV*TQETKMLQGGSSKG
Trigger: GCCCTTAGAACTACCACCCTGAAGCATCTTTGTTTCCTGTGTTCAGACGCAGACGAAGACCAACATTGTTTTATATGTTGAATTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR GCA 90 bp AAAAAGGACCTAAGACTGCACATCAACTCTAATATTTGGCTGCATTaGCCTGCTTGGCATTTATTAAATGGCTCTTTCCTTAAATTTCAC +
Preference number: 1 (lower is better)
Translates to: KKDLRLHINSNIWLH*PAWHLLNGSFLKFH
Trigger: GTGAAATTTAAGGAAAGAGCCATTTAATAAATGCCAAGCAGGGCAATGCAGCCAAATATTAGAGTTGATGTGCAGTCTTAGGTCCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 90 bp AAACATTGTAATCTATGTGAACTACTTCTCCAGTTGTCATATCTATaGGGACATTATCCAGATGTCTGTCTCCAAGACCAATTATGTAGC +
Preference number: 1 (lower is better)
Translates to: KHCNLCELLLQLSYL*GHYPDVCLQDQLCS
Trigger: GCTACATAATTGGTCTTGGAGACAGACATCTGGATAATGTCCTCATAGATATGACAACTGGAGAAGTAGTTCACATAGATTACAATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 90 bp TTATCTCTTGAAGCAAACTTGCAAGCTGAGTTGCTTCTAAGTTATTaGATGCAGCCTGATAATGTGTTATCCACTGTTCAAACTCATTCA +
Preference number: 1 (lower is better)
Translates to: LSLEANLQAELLLSY*MQPDNVLSTVQTHS
Trigger: TGAATGAGTTTGAACAGTGGATAACACATTATCAGGCTGCATTCAATAACTTAGAAGCAACTCAGCTTGCAAGTTTGCTTCAAGAGATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACCGAGGCGGGGTGACTaGCATGGCTTGTGGTCTGCT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPPRRGD*HGLWSA
Trigger: AGCAGACCACAAGCCATGTCAGTCACCCCGCCTCGG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp GCTGCCACTGGAACATGGCAATGTGCAGTTGCACCCGCTGCAGGCTaGTCTTGCAGGAAGAAATGCTGGTTTCCAGCCTGCGCACCAGGT +
Preference number: 2 (lower is better)
Translates to: AATGTWQCAVAPAAG*SCRKKCWFPACAPG
Trigger: ACCTGGTGCGCAGGCTGGAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCTGTTGGGCGTATCCCTaGGTGCAGCTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSCWAYP*VQLSCR
Trigger: CCTGCAGGACAGCTGCACTCAGGGATACGCCCAACA...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAGCTGGCAGGCATTACTaGGCATACCCAAATGCCAGG +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSAGRHY*AYPNAR
Trigger: CCTGGCATTTGGGTATGCTCAGTAATGCCTGCCAGC...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACACAGTATCTCTGGCTaGGACTTCTCCAGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPHSISG*DFSRKC
Trigger: GCACTTCCTGGAGAAGTCTCAGCCAGAGATACTGTG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACGGGCCAATCCCTCCTTaGCACATCCAGGCTAAGGCC +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHGPIPP*HIQAKA
Trigger: GGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCCC...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAATGGCTCCAAACTCTaGAACCACCCAGACACCTGC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPNGSKL*NHPDTC
Trigger: GCAGGTGTCTGGGTGGTTGCAGAGTTTGGAGCCATT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCCATGCTGGTCAGGATTaGAGACCGAGGCGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSHAGQD*RPRRGD
Trigger: GTCACCCCGCCTCGGTCTGCAATCCTGACCAGCATG...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACAGGTGTGGGGAATCTTaGGCCACGCGGCAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHRCGES*ATRQRR
Trigger: CCTCCTTTGCCGCGTGGCCCAAGATTCCCCACACCT...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAATGACCAGAGTTCCTTaGCCAGGAGATTTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPMTRVP*PGDLGV
Trigger: CACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCAT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATCCTGTGGTACCAGGTaGCACTGCTTCAGTAACTGC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPSCGTR*HCFSNC
Trigger: GCAGTTACTGAAGCAGTGCCACCTGGTACCACAGGA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACTGTCGACTAGGCTCTaGATGGTCTCACAGACAGTC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLSTRL*MVSQTV
Trigger: GACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp CACTGGAACATGGCAATGTGCAGTTGCACCCGCTGCAGGCTTGTCTaGCAGGAAGAAATGCTGGTTTCCAGCCTGCGCACCAGGTCATGC +
Preference number: 2 (lower is better)
Translates to: HWNMAMCSCTRCRLV*QEEMLVSSLRTRSC
Trigger: GCATGACCTGGTGCGCAGGCTGGAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp GGGCAGGATTGGCACCACCTGCCCACTTCAGCCGCTGCTCAATGCTaGCTTCAAGGGCTGCTAGTTTCTCCTGAACCGTCCCAATTGAAG +
Preference number: 2 (lower is better)
Translates to: GQDWHHLPTSAAAQC*LQGLLVSPEPSQLK
Trigger: CTTCAATTGGGACGGTTCAGGAGAAACTAGCAGCCCTTGAAGCAAGCATTGAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCGGGCGTATCCCTGAGTaGAGCTGTCCTGCAGGATTC +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSGRIPE*SCPAGF
Trigger: GAATCCTGCAGGACAGCTGCACTCAGGGATACGCCC...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGATTCTGGTGGATGTCTaGCCTCGCTTAACCAGACTC +
Preference number: 2 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLILVDV*PRLTRL
Trigger: GAGTCTGGTTAAGCGAGGTCAGACATCCACCAGAAT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGTGACTGCCTCCTCTTaGATCTTTGCACAGCATTGT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPVTASS*IFAQHC
Trigger: ACAATGCTGTGCAAAGATTCAAGAGGAGGCAGTCAC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAATCGGCTTTCAGATTaGGTGAGGTGCTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSNRLSD*VRCCWS
Trigger: ACTCCAGCAGCACCTCACTCAATCTGAAAGCCGATT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATGGCCTGGACTAGTGTaGACAAAACCGTCTGAATGT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPWPGLV*TKPSEC
Trigger: ACATTCAGACGGTTTTGTTCACACTAGTCCAGGCCA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACTCTCAATCCGAGGGTaGTCCTCTCCAACTGTATTA +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLSIRG*SSPTVL
Trigger: TAATACAGTTGGAGAGGAGCACCCTCGGATTGAGAG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCATGGCAATGTGCAGTTaGACCCGCTGCAGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSMAMCS*TRCRLV
Trigger: GACAAGCCTGCAGCGGGTGCAACTGCACATTGCCAT...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGACTGTGATGTGGCTTTaGATGCCTGAGGCTGAGTTG +
Preference number: 2 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLTVMWL*MPEAEL
Trigger: CAACTCAGCCTCAGGCATCCAAAGCCACATCACAGT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACGGGGTTTGTTTTCCTaGATTGTACACACAGGGTCA +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPRGLFS*IVHTGS
Trigger: TGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATGCCTCTGTAATTGGTaGACCCCGAATTGGGCTAAA +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPCLCNW*TPNWAK
Trigger: TTTAGCCCAATTCGGGGTCCACCAATTACAGAGGCA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAATAATGCCTCTCCATaGAGCAGTCGGGGTTGTCTC +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSNNASP*SSRGCL
Trigger: GAGACAACCCCGACTGCTCCATGGAGAGGCATTATT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACGCTCCATCCACCCACTaGATCAGCCCTGATCTCGTT +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHAPSTH*ISPDLV
Trigger: AACGAGATCAGGGCTGATCCAGTGGGTGGATGGAGC...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAACCACTCATCAGGAGTaGTGCAAGATGACCAGAGTT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPTTHQE*CKMTRV
Trigger: AACTCTGGTCATCTTGCACCACTCCTGATGAGTGGT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp GCTGTTCTGTGGCAGAAAGACAATCTCCGTGTGCAGGCAGTGAGCTaGCTTTCTTCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCC +
Preference number: 2 (lower is better)
Translates to: AVLWQKDNLRVQAVS*LSSPLTLAMVLGVS
Trigger: GGATACGCCCAACACCATGGCCAGGGTCAAAGGTGAAGAAAGCAAGCTCACTGCCTGCACACGGAGATTGTCTTTCTGCCACAGAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CAA 90 bp ACTCTCCACCACTCATCAGGAGTGGTGCAAGATGACCAGAGTTCCTaGGCCAGGAGATTTGGGGGTGTGGCCTCCATTAACTCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: TLHHSSGVVQDDQSS*ARRFGGVASINSSN
Trigger: GTTGGAGGAGTTAATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCTGATGAGTGGTGGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACCTGGAAAGGCTATTTaGACAGGAAGCCAAGGGTTT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSPGKAI*TGSQGF
Trigger: AAACCCTTGGCTTCCTGTTCAAATAGCCTTTCCAGG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp CAGTCGGGGTTGTCTCCAAGCCATGTTCCAGATACTGCCGGAGCTCACCAGCATGGCTTTCAGATTGAGTaGGGTGCTGCTGGAGTTCTT +
Preference number: 2 (lower is better)
Translates to: QSGLSPSHVPDTAGAHQHGFQIE*GAAGVL
Trigger: AAGAACTCCAGCAGCACCTCACTCAATCTGAAAGCC...ATGCTGGTGAGCTCCGGCAGTATCTGGAACATGGCTTGGAGACAACCCCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATTGCAGGATATAATATaGGGTGTGGGGAATCTTGGG +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLQDII*GVGNLG
Trigger: CCCAAGATTCCCCACACCTCATATTATATCCTGCAA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAACTCATCAGGAGTGGTaGAAGATGACCAGAGTTCCT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSTHQEW*KMTRVP
Trigger: AGGAACTCTGGTCATCTTGCACCACTCCTGATGAGT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp CAGTCGGGGTTGTCTCCAAGCCATGTTCCAGATACTGCCGGAGCTCACCAGCATGTATGCCTCTGTAATTaGTGGACCCCGAATTGGGCT +
Preference number: 2 (lower is better)
Translates to: QSGLSPSHVPDTAGAHQHVCLCN*WTPNWA
Trigger: AGCCCAATTCGGGGTCCACCAATTACAGAGGCATAC...ATGCTGGTGAGCTCCGGCAGTATCTGGAACATGGCTTGGAGACAACCCCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCTCCGAGGGCTTGGTTTaGGAGTCCTATCAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSSEGLV*ESYQEL
Trigger: CAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGA...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAGTTTCTTCTTCATGCTaGTCAGGATTGCAGACCGAG +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSVSSSC*SGLQTE
Trigger: CTCGGTCTGCAATCCTGACCAGCATGAAGAAGAAAC...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp CATCAGGAGTGGTGCAAGATGACCAGAGTTCCTTGGCCAGGAGATTaGGGGGTGTGGCCTCCATTAACTCCTCCAACACTGCCTTCATCA +
Preference number: 2 (lower is better)
Translates to: HQEWCKMTRVPWPGD*GVWPPLTPPTLPSS
Trigger: TGATGAAGGCAGTGTTGGAGGAGTTAATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTGTTGGGCGTATCCCTaGGTGCAGCTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNCWAYP*VQLSCR
Trigger: CCTGCAGGACAGCTGCACTCAGGGATACGCCCAACA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAGTGATCAACAAGCTTTaGAGTCCTTGGCTGCTCTTA +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSVINKL*SPWLLL
Trigger: TAAGAGCAGCCAAGGACTTCAAAGCTTGTTGATCAC...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAGTGTTAAGGGCAAAGTaGAGGGAGTCTTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSVLRAK*RESFFF
Trigger: GAAGAAGAAAGACTCCCTTCACTTTGCCCTTAACAC...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAATATTAGCACAGCACTaGCATCTGCTGTGTGTGATT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPILAQH*HLLCVI
Trigger: AATCACACACAGCAGATGTCAGTGCTGTGCTAATAT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCCAGAGGCCACATGGCTaGGGTCCTCAGCATATGCCT +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCQRPHG*GPQHMP
Trigger: AGGCATATGCTGAGGACCTCAGCCATGTGGCCTCTG...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAACATCAGAAAAGTCCTaGGGGTGGAACGTGTTACTT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSTSEKS*GWNVLL
Trigger: AAGTAACACGTTCCACCCTCAGGACTTTTCTGATGT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTCGTCCTCCAGTTGCTaGATTCGTCTCAGGACATAC +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHSSSSC*IRLRTY
Trigger: GTATGTCCTGAGACGAATTCAGCAACTGGAGGACGA...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACGTAGCAGTAATGAACTaGCACACTGTTGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHVAVMN*HTVGGG
Trigger: GCCACCTCCAACAGTGTGTCAGTTCATTACTGCTAC...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACTTTCAAGGTGGGAGTaGTTTCCTGCAGCATTTCAA +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSLSRWE*FPAAFQ
Trigger: TTGAAATGCTGCAGGAAATCACTCCCACCTTGAAAG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACACAGGAAACAAAGATaGTTCAGGGTGGTAGTTCTA +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPHRKQR*FRVVVL
Trigger: TAGAACTACCACCCTGAAGCATCTTTGTTTCCTGTG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACACTGCTTCAGTAACTaGACCAAGCAGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSHCFSN*TKQVTF
Trigger: AAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACCTGCGCACCAGGTCATaGTTCTTCCATGCTGTATCA +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHLRTRS*FFHAVS
Trigger: TGATACAGCATGGAAGAAGCATGACCTGGTGCGCAG...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACTTTTGGTACTTAACTaGTCAACCCAACCAGTACTG +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLLVLN*STQPVL
Trigger: CAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATTGTCAGCAGACATGTaGAGACTGAAAACAGCACCT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSLSADM*RLKTAP
Trigger: AGGTGCTGTTTTCAGTCTCCACATGTCTGCTGACAA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 90 bp GATAAGGAGGTCTTCATGCTGCCACTGGAACATGGCAATGTGCAGTaGCACCCGCTGCAGGCTTGTCTTGCAGGAAGAAATGCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: DKEVFMLPLEHGNVQ*HPLQACLAGRNAGF
Trigger: GAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGACCTCCTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp GCTATTGTTGCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATaGGCACCACCTGCCCACTTCAGCCGCTGCTCAATGCTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: AIVASKSCSTGARAG*APPAHFSRCSMLAS
Trigger: TGAAGCAAGCATTGAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGCAACAATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTCCGTGTGCAGGCAGTaGGCTTGCTTTCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSVCRQ*ACFLHL
Trigger: AAGGTGAAGAAAGCAAGCTCACTGCCTGCACACGGA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAACGTCACTTTATTGTaGACCTGTCATCAACAATGC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPNVTLL*TCHQQC
Trigger: GCATTGTTGATGACAGGTTCACAATAAAGTGACGTT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CAGTCGGGGTTGTCTCCAAGCCATGTTCCAGATACTGCCGGAGCTCACCAGCATTGCACTGAAGACAGGTaGTACAACTGTCCCAAAATG +
Preference number: 2 (lower is better)
Translates to: QSGLSPSHVPDTAGAHQHCTEDR*YNCPKM
Trigger: CATTTTGGGACAGTTGTATCACCTGTCTTCAGTGCA...ATGCTGGTGAGCTCCGGCAGTATCTGGAACATGGCTTGGAGACAACCCCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACGTTCCACCCACACTGTaGATTGTCACAGTATCTCTG +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHVPPTL*IVTVSL
Trigger: CAGAGATACTGTGACAATTCACAGTGTGGGTGGAAC...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp AATGATGTCAACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCAGGAGTGGTGCAAGATaGCCAGAGTTCCTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: NDVNTQGTDKATQCESEGRSGAR*PEFLGQ
Trigger: CTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCT...GCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCGTTTTTCAACATCTGTaGGCTGCTCCTGCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSVFQHL*AAPAGL
Trigger: TAAGCCTGCAGGAGCAGCTCACAGATGTTGAAAAAC...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATTGCTTGGATTAAGATaGCAAGTACTTCTGATGCCT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLLGLR*QVLLMP
Trigger: AGGCATCAGAAGTACTTGGCATCTTAATCCAAGCAA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR GCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACCTATCACATCATCAGTaGTCTGCTCTGCTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHLSHHQ*SALLCD
Trigger: GTCACAGAGCAGAGCAGAGCACTGATGATGTGATAG...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AATGATGTCAACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCCGGAGCTCACCAGCATaGTTCACTAGCAACCTGAGC +
Preference number: 2 (lower is better)
Translates to: NDVNTQGTDKATQCESEGRSSPA*FTSNLS
Trigger: GCTCAGGTTGCTAGTGAAGCATGCTGGTGAGCTCCG...GCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCCCATGTTCCAGATACTaGCGGAGCTCACCAGCATGC +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCPCSRY*RSSPAC
Trigger: GCATGCTGGTGAGCTCCGGCAGTATCTGGAACATGG...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGATCTCTCGCTTACTCTaGTTGCTCTCAGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMISRLL*LLSACW
Trigger: CCAGCAGGCTGAGAGCAAGCAGAGTAAGCGAGAGAT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACAAGGTCCATTTGTGTaGTTATCTCTTGAAGCAAAC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPQGPFV*LSLEAN
Trigger: GTTTGCTTCAAGAGATAAGCACACAAATGGACCTTG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCGCTGCAGGCTTGTCTTaGAGGAAGAAATGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSAAGLS*RKKCWF
Trigger: AAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGC...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAATCAACTCTAATATTTaGCTGCATTGCCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSINSNI*LHCPAW
Trigger: CCAAGCAGGGCAATGCAGCCAAATATTAGAGTTGAT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACCTAACTCCATGAGATaGCTTCTAATTGGTACTGTT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPPNSMR*LLIGTV
Trigger: AACAGTACCAATTAGAAGCCATCTCATGGAGTTAGG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAGCTGCTTCCAGGCTTaGCAGGATTTGATGGCGTCT +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSCFQA*QDLMAS
Trigger: AGACGCCATCAAATCCTGCCAAGCCTGGAAGCAGCT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCGTAAAGACCAAACAATaGTGTGGCTCCATCCACCCA +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSVKTKQ*CGSIHP
Trigger: TGGGTGGATGGAGCCACACCATTGTTTGGTCTTTAC...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCCCTCGCCGCATGATGTaGAGAACCTGCTCACAGGAA +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCPRRMM*RTCSQE
Trigger: TTCCTGTGAGCAGGTTCTCCACATCATGCGGCGAGG...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACCTTCTTCAAGTCCCATaGCTGTGTTTCGCAAGTAGG +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHLLQVP*LCFASR
Trigger: CCTACTTGCGAAACACAGCCATGGGACTTGAAGAAG...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp AGCTGCTCCTGCAGGCTTAGGTATTCATCTAAGCTGCTGTCCAGCTaGGGAAGCACAACCAGCATCTCATCCCGGTTCTTAAACCAGTTC +
Preference number: 2 (lower is better)
Translates to: SCSCRLRYSSKLLSS*GSTTSISSRFLNQF
Trigger: GAACTGGTTTAAGAACCGGGATGAGATGCTGGTTGTGCTTCCCAAGCTGGACAGCAGCTTAGATGAATACCTAAGCCTGCAGGAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp GTCTTAGGGTCTCTGACAGCCTTTTTAGGACTACAGGCGATGCTCTaGCCAGTTCCTGGGATGGTGCTTGGTGGAGTATCTGCTGATGTA +
Preference number: 2 (lower is better)
Translates to: VLGSLTAFLGLQAML*PVPGMVLGGVSADV
Trigger: TACATCAGCAGATACTCCACCAAGCACCATCCCAGGAACTGGCAAGAGCATCGCCTGTAGTCCTAAAAAGGCTGTCAGAGACCCTAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCATCACCACCGACTGTaGTGTGGCTTTGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNHHHRL*CGFGCL
Trigger: CAGGCATCCAAAGCCACATCACAGTCGGTGGTGATG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATGTTTCTCAAGAATCTaGATGCAACAACTCTTCCGT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSCFSRI*MQQLFR
Trigger: ACGGAAGAGTTGTTGCATTCAGATTCTTGAGAAACA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTTCAGGTGCCTGCACTaGAGACAGGTGATACAACTG +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMFRCLH*RQVIQL
Trigger: CAGTTGTATCACCTGTCTTCAGTGCAGGCACCTGAA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGACTTGGATTGCTTCCTaGACAGCTCTTTGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMTWIAS*TALCWV
Trigger: GACCCAGCAAAGAGCTGTTCAGGAAGCAATCCAAGT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGTAGCCAGATTTTTCTaGATCAGCTTTTTAGCATTC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPVARFF*ISFLAF
Trigger: GAATGCTAAAAAGCTGATTCAGAAAAATCTGGCTAC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCCCCAACCAGTACTGTTaGCGAGCAACAAATGTTTCT +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSPNQYC*RATNVS
Trigger: AGAAACATTTGTTGCTCGGCAACAGTACTGGTTGGG...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACAGAACTATATTCTTTaGCATCTTCAAATAGCCAGC +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPQNYIL*HLQIAS
Trigger: GCTGGCTATTTGAAGATGGCAAAGAATATAGTTCTG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR GCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACAGGACATACATGTGCTaGTGTAACAAAACTCCCAGC +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHRTYMC*CNKTPS
Trigger: GCTGGGAGTTTTGTTACAGCAGCACATGTATGTCCT...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACAATTTTCTCTTCTTTaGGCAAGGTGTTGTTGTTCT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPQFSLL*ARCCCS
Trigger: AGAACAACAACACCTTGCGCAAAGAAGAGAAAATTG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAAGATGGGCTTCATCAGTaGTGTGTGCTTCTCTCGCAT +
Preference number: 2 (lower is better)
Translates to: NQAPSLDVRSTSCSPALEDGLHQ*CVLLSH
Trigger: ATGCGAGAGAAGCACACAGCACTGATGAAGCCCATC...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAAGTGATGCTCCGCACATaGTCCAAAGCAAACACGATG +
Preference number: 2 (lower is better)
Translates to: NQAPSLDVRSTSCSPALEVMLRT*SKANTM
Trigger: CATCGTGTTTGCTTTGGAGCATGTGCGGAGCATCAC...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGTGTGTGATTGGGAGTaGCAGGCTAGTTGTAGGTGT +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMVCDWE*QASCRC
Trigger: ACACCTACAACTAGCCTGCCACTCCCAATCACACAC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CCA 90 bp GGCCAATCCCTCCTTGACACATCCAGGCTAAGGCCAACTGTTTTCAAAGCAGGACAGTGCAAATACAGTTaGAGACAGTGCCCACATCCC +
Preference number: 2 (lower is better)
Translates to: GQSLLDTSRLRPTVFKAGQCKYS*RQCPHP
Trigger: GGGATGTGGGCACTGTCTCCAACTGTATTTGCACTG...TCCTGCTTTGAAAACAGTTGGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp AGCGAGTATGTTCCTAGACAAAGTAGAAAGGCCAGAAAGGTTCTGTaGCTGCTGAGCTCTGTACACCTGCCTCAGCTGTCCCGAAATCTC +
Preference number: 2 (lower is better)
Translates to: SEYVPRQSRKARKVL*LLSSVHLPQLSRNL
Trigger: GAGATTTCGGGACAGCTGAGGCAGGTGTACAGAGCTCAGCAGCAACAGAACCTTTCTGGCCTTTCTACTTTGTCTAGGAACATACTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATCTCAGCTAACCTCCTaGCACGTTTGCAGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQSQLTS*HVCSCS
Trigger: AGAACAGCTGCAAACGTGTCAGGAGGTTAGCTGAGA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAAAGCTCTTCTGACATaGAGAATGTCTGAAAATGAC +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSKALLT*RMSEND
Trigger: GTCATTTTCAGACATTCTTCATGTCAGAAGAGCTTT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTGGGGTTCGCAACTTTaGAAGAACAGTAAACTGCGC +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMWGSQL*KNSKLR
Trigger: GCGCAGTTTACTGTTCTTTCAAAGTTGCGAACCCCA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATCCTTTGCCTCTACCTaGGCAATGATGTCAACACCC +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQSFAST*AMMSTP
Trigger: GGGTGTTGACATCATTGCTCAGGTAGAGGCAAAGGA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCAAGTCTCAATCTGACTaGGAGCATGCAGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSKSQSD*EHAVSS
Trigger: AGAAGAAACTGCATGCTCTCAGTCAGATTGAGACTT...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAACTCAAAATACCATGTaGTATTCTGTGTTGATACGT +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPTQNTM*YSVLIR
Trigger: ACGTATCAACACAGAATAGCACATGGTATTTTGAGT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGTTTATCTACAATTTTaGTGTAGCAATCCTGCATCA +
Preference number: 2 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPVYLQF*CSNPAS
Trigger: TGATGCAGGATTGCTACAGCAAAATTGTAGATAAAC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATCGCAAGATGTAGCTTaGTCGTTTCTGCGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQSQDVA*SFLRSL
Trigger: CAGAGAGCGCAGAAACGAGCAAGCTACATCTTGCGA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAAAAGCGGGGTGTTTCCTaGCGGTTAATTGTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: NQAPSLDVRSTSCSPALEKRGVS*RLIVAN
Trigger: GTTTGCTACAATTAACCGGCAGGAAACACCCCGCTT...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAATCAACATCTGTGAGCTaGTCCTGCAGGCTTAGGTAT +
Preference number: 2 (lower is better)
Translates to: NQAPSLDVRSTSCSPALESTSVS*SCRLRY
Trigger: ATACCTAAGCCTGCAGGAGCAGCTCACAGATGTTGA...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp AATGATGTCAACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCCAGGCATCAGGAAGCTaGAGACTGTGTAGCAGATTG +
Preference number: 2 (lower is better)
Translates to: NDVNTQGTDKATQCESEGQASGS*RLCSRL
Trigger: CAATCTGCTACACAGTCTCCAGCTTCCTGATGCCTG...GCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCTCCTGCATCATGGCCTaGTCTTCATTTAAACCACTT +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSSCIMA*SSFKPL
Trigger: AAGTGGTTTAAATGAAGACCAGGCCATGATGCAGGA...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCCATTATCTCTTTGAATaGAATCCAGCTGCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSHYLFE*NPAASR
Trigger: CCTGGAAGCAGCTGGATTCCATTCAAAGAGATAATG...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAACACACTGTTGGAGGTaGCTGAGGAGCATACTGCAT +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQTHCWR*LRSILH
Trigger: ATGCAGTATGCTCCTCAGCCACCTCCAACAGTGTGT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp AACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCTaGGTTTGGGAGTCCTATCAAGAGCTGTCTTACAAAGTCAGCTGT +
Preference number: 2 (lower is better)
Translates to: NTQGTDKATQCESEG*VWESYQELSYKVSC
Trigger: ACAGCTGACTTTGTAAGACAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CTAATCACCGCACCATCAAATAAGGAAGGGGATGAAGAGCTAAGACTACTGGATGCTGGCAGGCATTACTaGGCATACCCAAATGCCAGG +
Preference number: 2 (lower is better)
Translates to: LITAPSNKEGDEELRLLDAGRHY*AYPNAR
Trigger: CCTGGCATTTGGGTATGCTCAGTAATGCCTGCCAGC...ATCCAGTAGTCTTAGCTCTTCATCCCCTTCCTTATTTGATGGTGCGGTGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGACCAAGGATCAGCAGTaGGTACTGAAAATGCTAAGC +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMTKDQQ*VLKMLS
Trigger: GCTTAGCATTTTCAGTACTCACTGCTGATCCTTGGT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTACAAATTCTTACCCTaGACCTGGGCTTTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMYKFLP*TWALSS
Trigger: AGAGCTCAAAGCCCAGGTTCAGGGTAAGAATTTGTA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAGGCCAGGAAGACTCTaGTTTAAAGTACTGCCTGTA +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMRPGRL*FKVLPV
Trigger: TACAGGCAGTACTTTAAATCAGAGTCTTCCTGGCCT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCACAAACTGGCACAGTaGCAGCTTCTTGTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMHKLAQ*QLLVSN
Trigger: GTTTGAAACAAGAAGCTGTCACTGTGCCAGTTTGTG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAACTGCACCAAGCAGGTaGCATTTCCACTCATACTAC +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQTAPSR*HFHSYY
Trigger: GTAGTATGAGTGGAAATGTCACCTGCTTGGTGCAGT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATAACCACCCAGACACCTaGTGTGTGAGGGAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYNHPDT*CVREGF
Trigger: GAAACCCTCCCTCACACAGCAGGTGTCTGGGTGGTT...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAATCTCTTTCCATTCTaGCTGGACCCATTTAGCCAG +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMNLFPF*LDPFSQ
Trigger: CTGGCTAAATGGGTCCAGGCAGAATGGAAAGAGATT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCGACTTCTCCAGGAAGTaGAATTTCAGTGTTAGTCAT +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSDFSRK*NFSVSH
Trigger: ATGACTAACACTGAAATTGCACTTCCTGGAGAAGTC...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGGTATTCATCTAAGCTaGTGTCCAGCTTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQGIHLS*CPAWEA
Trigger: TGCTTCCCAAGCTGGACAGCAGCTTAGATGAATACC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCGTCATGCTTCTTCCATaGTGTATCATAGGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCVMLLP*CIIGAG
Trigger: GCCAGCTCCTATGATACAGCATGGAAGAAGCATGAC...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATGTTTTCATTGGATTTaGAGAAACTCCTGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSCFHWI*RNSCFC
Trigger: ACAGAAACAGGAGTTTCTCCAAATCCAATGAAAACA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCACATCTAAGTGCTTCTaGGAATATGATTTGCCGGAA +
Preference number: 2 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSTSKCF*EYDLPE
Trigger: TTCCGGCAAATCATATTCCCAGAAGCACTTAGATGT...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTGCCTGAGGCTGAGTTaGTTCTGGTGGATGTCTGAC +
Preference number: 2 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCCLRLS*FWWMSD
Trigger: GTCAGACATCCACCAGAATCAACTCAGCCTCAGGCA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTTGCCTGAGGCTGAGTTaGTTCTGGTGGATGTCTGAC +
Preference number: 2 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEICLRLS*FWWMSD
Trigger: GTCAGACATCCACCAGAATCAACTCAGCCTCAGGCA...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTCCGTGTGCAGGCAGTaGGCTTGCTTTCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCSVCRQ*ACFLHL
Trigger: AAGGTGAAGAAAGCAAGCTCACTGCCTGCACACGGA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAACCAAGGATCAGCAGTaGGTACTGAAAATGCTAAGC +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQTKDQQ*VLKMLS
Trigger: GCTTAGCATTTTCAGTACTCACTGCTGATCCTTGGT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAGTACTTCTGATGCCTaGGACTCTTGGGGAATAAAA +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSTSDA*DSWGIK
Trigger: TTTTATTCCCCAAGAGTCTCAGGCATCAGAAGTACT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTCTTGCCTCAACTCCTaGAGCAACTTACTACTTTCA +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSCLNS*SNLLLS
Trigger: TGAAAGTAGTAAGTTGCTTCAGGAGTTGAGGCAAGA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTCTCTGCTCTGCTCTGTaGCTTAAATGGAGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEILCSAL*LKWSLG
Trigger: TCCCAGGCTCCATTTAAGTCACAGAGCAGAGCAGAG...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCTCTTTATTGCTATCCTaGGAAGCAGGAGGACTTCCT +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCSLLLS*EAGGLP
Trigger: AGGAAGTCCTCCTGCTTCTCAGGATAGCAATAAAGA...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGTGAACAAAACCGTCTaGATGTTGTCTTGCCATGAT +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMVNKTV*MLSCHD
Trigger: ATCATGGCAAGACAACATTCAGACGGTTTTGTTCAC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAAACATGCCATCAAATaGTACCAAAAGCATCTGGCC +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMKHAIK*YQKHLA
Trigger: GGCCAGATGCTTTTGGTAGCATTTGATGGCATGTTT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAAAAAGTGACCTGGTTTaGTCTCTGGCTCTCTTTGAG +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQKSDLV*SLALFE
Trigger: CTCAAAGAGAGCCAGAGAGCAAACCAGGTCACTTTT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGTGGGAGTGATTTCCTaGAGCATTTCAACATGTTCT +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMVGVIS*SISTCS
Trigger: AGAACATGTTGAAATGCTGCAGGAAATCACTCCCAC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTACAGCATAGCCTTTTaGTACTTAACTGGTCAACCC +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMYSIAF*YLTGQP
Trigger: GGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CAA 90 bp TTCGATGTTTCTGAAATATGGCTTTTGGATACTGCAGAGCAACTGTaGCATAGTGATGCAGCTGTTCCAGACAGCCACGGAGCACAGAAC +
Preference number: 2 (lower is better)
Translates to: FDVSEIWLLDTAEQL*HSDAAVPDSHGAQN
Trigger: GTTCTGTGCTCCGTGGCTGTCTGGAACAGCTGCATCACTATGCAACAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGAAACATCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp CTGGATGGTCTCACAGACAGTCTCTATCTGCTGCTCCTTCTCTGTTaGAACAGCTCTTTGGGTGGACATATCCTGGGTCAATTGTTTATG +
Preference number: 2 (lower is better)
Translates to: LDGLTDSLYLLLLLC*NSSLGGHILGQLFM
Trigger: CATAAACAATTGACCCAGGATATGTCCACCCAAAGAGCTGTTCAAACAGAGAAGGAGCAGCAGATAGAGACTGTCTGTGAGACCATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATTATCCAGAGTGCAGTaGTCAACAAGCTTTGAAGTC +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQLSRVQ*STSFEV
Trigger: GACTTCAAAGCTTGTTGATCACTGCACTCTGGATAA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTTGTTCTGTACCCTCTaGATCTTAAAAGAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMLFCTL*ILKEWR
Trigger: TCTCCACTCTTTTAAGATTCAGAGGGTACAGAACAA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR TCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCATAGCTCTTCCCATCTaGTCCAAGAAAGAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCIALPI*SKKEEF
Trigger: AAACTCCTCTTTCTTGGATCAGATGGGAAGAGCTAT...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATACTGTTGGAGGTGGCTaGGGAGCATACTGCATTTCA +
Preference number: 2 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYTVGGG*GAYCIS
Trigger: TGAAATGCAGTATGCTCCTCAGCCACCTCCAACAGT...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATTCTGCTGCATACCGCTaGAGGGTCATTTCAGTAGCA +
Preference number: 2 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYSAAYR*RVISVA
Trigger: TGCTACTGAAATGACCCTTCAGCGGTATGCAGCAGA...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAGGGCGTATCCCTGAGTaGAGCTGTCCTGCAGGATTC +
Preference number: 2 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLGRIPE*SCPAGF
Trigger: GAATCCTGCAGGACAGCTGCACTCAGGGATACGCCC...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAAGTGGGATCCATAGGTaGTTTTCTCTTCGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQSGIHR*FSLRFR
Trigger: TCTGAAACGAAGAGAAAAGCACCTATGGATCCCACT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCAGCTCTATTCTAGTCTaGACTTCTACCAAGGATCAG +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCSSILV*TSTKDQ
Trigger: CTGATCCTTGGTAGAAGTGCAGACTAGAATAGAGCT...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATTCCCAAATAGCCCACTaGCAAAGGACAGCATCTGTC +
Preference number: 2 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYSQIAH*QRTASV
Trigger: GACAGATGCTGTCCTTTGGCAGTGGGCTATTTGGGA...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATTGTCAACCACCTTTCTaGCCCACCTATAAGCCCAAC +
Preference number: 2 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYCQPPF*PTYKPN
Trigger: GTTGGGCTTATAGGTGGGGCAGAAAGGTGGTTGACA...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTTTGCAGCTGTTCTGTaGCAGAAAGACAATCTCCGT +
Preference number: 2 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNFAAVL*QKDNLR
Trigger: ACGGAGATTGTCTTTCTGCCACAGAACAGCTGCAAA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTGAAGAGGACAACGCATaGAGACTGCTACATGCTTGC +
Preference number: 2 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEIEEDNA*RLLHAC
Trigger: GCAAGCATGTAGCAGTCTCCATGCGTTGTCCTCTTC...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACATAGCACAGTTTTTCTaGATTCACCATTTAGAGAGT +
Preference number: 2 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHIAQFF*IHHLES
Trigger: ACTCTCTAAATGGTGAATCCAGAAAAACTGTGCTAT...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATCACCTTCTCCCTGACTaGCATTGTCAACCACCTTTC +
Preference number: 2 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYHLLPD*HCQPPF
Trigger: GAAAGGTGGTTGACAATGCCAGTCAGGGAGAAGGTG...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGAAAATGACACATCTTaGGAGAGCCAAAGTGCAATT +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQENDTS*ESQSAI
Trigger: AATTGCACTTTGGCTCTCTCAAGATGTGTCATTTTC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACTCATTACGTTTGGATaGACAGTGACAATTCAGGAA +
Preference number: 2 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQLITFG*TVTIQE
Trigger: TTCCTGAATTGTCACTGTGCATCCAAACGTAATGAG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GATTCTGTCCACAACTTTCCGCCACACTTTAATAACACCTTCAGTTGCATTTTCGAGAGTGTTTGGGGCTaGCACTGTTACGTCCAGCAT +
Preference number: 2 (lower is better)
Translates to: DSVHNFPPHFNNTFSCIFESVWG*HCYVQH
Trigger: ATGCTGGACGTAACAGTGCCAGCCCCAAACACTCTC...GAAAATGCAACTGAAGGTGTTATTAAAGTGTGGCGGAAAGTTGTGGACAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATGACGAGGTACAATGCTaGGATTCTGAGGAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYDEVQC*DSEEFG
Trigger: ACCAAACTCCTCAGAATCCCAGCATTGTACCTCGTC...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp TCCAGGCCTTCCACTGTTCAATTCGATGTTTCTGAAATATGGCTTTaGGATACTGCAGAGCAACTGTTGCATAGTGATGCAGCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SRPSTVQFDVSEIWL*DTAEQLLHSDAAVP
Trigger: TGGAACAGCTGCATCACTATGCAACAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGAAACATCGAATTGAACAGTGGAAGGCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCAGTCACAGATATGACTaGAATAACCAGAGTTACATC +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCSHRYD*NNQSYI
Trigger: GATGTAACTCTGGTTATTTCAGTCATATCTGTGACT...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCCCATTCACAGTATTCTaGTCTTCAAGTGAACTTGAT +
Preference number: 2 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCPFTVF*SSSELD
Trigger: ATCAAGTTCACTTGAAGATCAGAATACTGTGAATGG...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTCAGCTTGATATTAACTaGCGCCAGATAACATCGACC +
Preference number: 2 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEIQLDIN*RQITST
Trigger: GGTCGATGTTATCTGGCGGCAGTTAATATCAAGCTG...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTCTCAGGACATACATGTaGTGCTGTAACAAAACTCCC +
Preference number: 2 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEILRTYM*CCNKTP
Trigger: GGGAGTTTTGTTACAGCAGCACATGTATGTCCTGAG...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTGTTTTCATTGGATTTaGAGAAACTCCTGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMCFHWI*RNSCFC
Trigger: ACAGAAACAGGAGTTTCTCCAAATCCAATGAAAACA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAATTTCCATGTTTTCATTaGATTTGGAGAAACTCCTGT +
Preference number: 2 (lower is better)
Translates to: NQAPSLDVRSTSCSPALEFPCFH*IWRNSC
Trigger: ACAGGAGTTTCTCCAAATCCAATGAAAACATGGAAA...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TTCAGCAGCCATTCCCAGTTGGCTGTCCTACTCTCTTGGCACACTGAACGCAATAACAGTCAAGTTCCATaGATCCTAAAAGCAAGATTT +
Preference number: 2 (lower is better)
Translates to: FSSHSQLAVLLSWHTERNNSQVP*ILKARF
Trigger: AAATCTTGCTTTTAGGATCCATGGAACTTGACTGTT...ATTGCGTTCAGTGTGCCAAGAGAGTAGGACAGCCAACTGGGAATGGCTGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
3UTR CAA 90 bp TTCACAAACTGGCACAGTGACAGCTTCTTGTTTCAAACGTTCCACTaGTCTAATAAGTCTGCTGTTTATGTCTGCTGCATACCGCTGAAG +
Preference number: 2 (lower is better)
Translates to: FTNWHSDSFLFQTFH*SNKSAVYVCCIPLK
Trigger: CTTCAGCGGTATGCAGCAGACATAAACAGCAGACTTATTAGACAAGTGGAACGTTTGAAACAAGAAGCTGTCACTGTGCCAGTTTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp GGGAGTCCTATCAAGAGCTGTCTTACAAAGTCAGCTGTAAAGGCCTaGATAGGCTTGGCCATTTGGTCTTCACTAAAGCAAGAATTTCTA +
Preference number: 2 (lower is better)
Translates to: GSPIKSCLTKSAVKA*IGLAIWSSLKQEFL
Trigger: TAGAAATTCTTGCTTTAGTGAAGACCAAATGGCCAAGCCTATCAAGGCCTTTACAGCTGACTTTGTAAGACAGCTCTTGATAGGACTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAATTCTGGTGGATGTCTaGCCTCGCTTAACCAGACTC +
Preference number: 2 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLILVDV*PRLTRL
Trigger: GAGTCTGGTTAAGCGAGGTCAGACATCCACCAGAAT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTTCAGCATTATCTCTTTaGATGGAATCCAGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEISALSL*MESSCF
Trigger: GAAGCAGCTGGATTCCATTCAAAGAGATAATGCTGA...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp CAACATCAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATGGCTGTGTTTCAGCCCAACTAGCCAATaGTGCCCAAGATTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: QHQYNEHEFLLQVPWLCFSPTSQ*CPRFGY
Trigger: GTAGCCAAATCTTGGGCAGCATTGGCTAGTTGGGCT...GAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTGATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp CAACATCAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATGGCTGTGTTTCACTGTGATGTGGCTTTaGATGCCTGAGGCTGAGTTG +
Preference number: 2 (lower is better)
Translates to: QHQYNEHEFLLQVPWLCFTVMWL*MPEAEL
Trigger: CAACTCAGCCTCAGGCATCCAAAGCCACATCACAGT...GAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTGATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp GTAGCTCTGTTCATCACCAACTGTGAGAATTTCCCTACCTGGATATaGTGCTCCACAGCTTTCTTACACAGATCATCTACAGAAACTTTG +
Preference number: 2 (lower is better)
Translates to: VALFITNCENFPTWI*CSTAFLHRSSTETL
Trigger: CAAAGTTTCTGTAGATGATCTGTGTAAGAAAGCTGTGGAGCACAATATCCAGGTAGGGAAATTCTCACAGTTGGTGATGAACAGAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTGTTTCTCAAGAATCTaGATGCAACAACTCTTCCGT +
Preference number: 2 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCCFSRI*MQQLFR
Trigger: ACGGAAGAGTTGTTGCATTCAGATTCTTGAGAAACA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR TCA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTAACGTCACTTTATTGTaGACCTGTCATCAACAATGC +
Preference number: 2 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEINVTLL*TCHQQC
Trigger: GCATTGTTGATGACAGGTTCACAATAAAGTGACGTT...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR GCA 90 bp CAACATCAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATGGCTGTGTTTCTTCATCAGTGCTGTGTaGTTCTCTCGCATGATGGCA +
Preference number: 2 (lower is better)
Translates to: QHQYNEHEFLLQVPWLCFFISAV*FSRMMA
Trigger: TGCCATCATGCGAGAGAAGCACACAGCACTGATGAA...GAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTGATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp GATTCTGTCCACAACTTTCCGCCACACTTTAATAACACCTTCAGTTGCATTTTCTTTGCAGCTGTTCTGTaGCAGAAAGACAATCTCCGT +
Preference number: 2 (lower is better)
Translates to: DSVHNFPPHFNNTFSCIFFAAVL*QKDNLR
Trigger: ACGGAGATTGTCTTTCTGCCACAGAACAGCTGCAAA...GAAAATGCAACTGAAGGTGTTATTAAAGTGTGGCGGAAAGTTGTGGACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp CAAGGATCAGCAGTGAGTACTGAAAATGCTAAGCTGAAGGATGCCTaGATCGTGACTCACTACACACTAGTCACTAAACAAGCTATAAAA +
Preference number: 2 (lower is better)
Translates to: QGSAVSTENAKLKDA*IVTHYTLVTKQAIK
Trigger: TTTTATAGCTTGTTTAGTGACTAGTGTGTAGTGAGTCACGATCAAGGCATCCTTCAGCTTAGCATTTTCAGTACTCACTGCTGATCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CAA 90 bp CAAGGGTTTTATCCAGAGTGCAGTGATCAACAAGCTTTGAAGTCCTaGGCTGCTCTTATCTGCACTATTCTTTTCTCAAAGACCAGTTTA +
Preference number: 2 (lower is better)
Translates to: QGFYPECSDQQALKS*AALICTILFSKTSL
Trigger: TAAACTGGTCTTTGAGAAAAGAATAGTGCAGATAAGAGCAGCCAAGGACTTCAAAGCTTGTTGATCACTGCACTCTGGATAAAACCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 90 bp AAAAACACCTTCTACTCCAGTTACACCCAGTGCTGTTTCAATGTTTaGTGTCATTCGAAAAGGCACTTTCTCGGGAACTCTAAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: KNTFYSSYTQCCFNV*CHSKRHFLGNSKAF
Trigger: AAAAGCCTTAGAGTTCCCGAGAAAGTGCCTTTTCGAATGACACAAAACATTGAAACAGCACTGGGTGTAACTGGAGTAGAAGGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp CAACATCAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATGGCTGTGTTTCAGGTTACAAATACTCTaGCGCACATACACTTCAGGG +
Preference number: 2 (lower is better)
Translates to: QHQYNEHEFLLQVPWLCFRLQIL*RTYTSG
Trigger: CCCTGAAGTGTATGTGCGCCAGAGTATTTGTAACCT...GAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTGATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 90 bp CCAGCATTTAGCTTAAGGAAAGTAAAATATGCACTGCAAGACAATTaGTACAGGCTGAAGATTCTGTCCACAACTTTCCGCCACACTTTA +
Preference number: 2 (lower is better)
Translates to: PAFSLRKVKYALQDN*YRLKILSTTFRHTL
Trigger: TAAAGTGTGGCGGAAAGTTGTGGACAGAATCTTCAGCCTGTACAAATTGTCTTGCAGTGCATATTTTACTTTCCTTAAGCTAAATGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACTTTTGGTACTTAACTaGTCAACCCAACCAGTACTG +
Preference number: 2 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLLLVLN*STQPVL
Trigger: CAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CAA 90 bp AAGTGTTATATCTTCATCCTGAATTCCTGCTGGCCGACATACAGCTaGTCCAAGAATACCATATATTCTCTCTTTCTCTTCTTCAGTTAT +
Preference number: 2 (lower is better)
Translates to: KCYIFILNSCWPTYS*SKNTIYSLFLFFSY
Trigger: ATAACTGAAGAAGAGAAAGAGAGAATATATGGTATTCTTGGACAAGCTGTATGTCGGCCAGCAGGAATTCAGGATGAAGATATAACACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp CTCAGCCTGCTGGCCACCTCCACCATAGACAGCACCTaGAAACCCAGCCTCACCACCAGCTGTCCAGTCCAC +
Preference number: 3 (lower is better)
Translates to: LSLLATSTIDST*KPSLTTSCPVH
Trigger: GTGGACTGGACAGCTGGTGGTGAGGCTGGGTTTGCAGGTGCTGTCTATGGTGGAGGTGGCCAGCAGGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp AGCTGTTCCAGACAGCCACGGAGCACAGAACGCCTCTaGTGCAGCAGAGCGCCAACTTCCCCCTCTAGCTGC +
Preference number: 3 (lower is better)
Translates to: SCSRQPRSTERL*CSRAPTSPSSC
Trigger: GCAGCTAGAGGGGGAAGTTGGCGCTCTGCTGCAGCAGAGGCGTTCTGTGCTCCGTGGCTGTCTGGAACAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAACCCTGGCCATGGTGTaGGGCGTATCCCTGAGTGCA +
Preference number: 3 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPTLAMV*GVSLSA
Trigger: TGCACTCAGGGATACGCCCAACACCATGGCCAGGGT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR GCA 72 bp CTCTGCTGCAGCAGAGCGCCAACTTCCCCCTCTAGCTaGTCACACTGGCTGATGAGGTGTGCTTGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: LCCSRAPTSPSS*SHWLMRCACPA
Trigger: TGCTGGGCAAGCACACCTCATCAGCCAGTGTGAGCAGCTAGAGGGGGAAGTTGGCGCTCTGCTGCAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TGTTCCAGACAGCCACGGAGCACAGAACGCCTCTGCTaGAGCAGAGCGCCAACTTCCCCCTCTAGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: CSRQPRSTERLC*SRAPTSPSSCS
Trigger: TGAGCAGCTAGAGGGGGAAGTTGGCGCTCTGCTGCAGCAGAGGCGTTCTGTGCTCCGTGGCTGTCTGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp GGTGTCTCTGCAGGGGCAGCGGTGATGCTCCGCACATaGTCCAAAGCAAACACGATGGGCTTCATCAGTGCT +
Preference number: 3 (lower is better)
Translates to: GVSAGAAVMLRT*SKANTMGFISA
Trigger: AGCACTGATGAAGCCCATCGTGTTTGCTTTGGAGCATGTGCGGAGCATCACCGCTGCCCCTGCAGAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GCACCCGCTGCAGGCTTGTCTTGCAGGAAGAAATGCTaGTTTCCAGCCTGCGCACCAGGTCATGCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: APAAGLSCRKKC*FPACAPGHASS
Trigger: GGAAGAAGCATGACCTGGTGCGCAGGCTGGAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGGTGCCAGGGCAGGATaGGCACCACCTGCCCACTTC +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQGARAG*APPAHF
Trigger: GAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp TGGACTAAGTCCTGGGCAGTGGTTGTCTTTCCCAGCTaGACCTCACTGCACTGTGCCAGCAGTCTTGTCGCC +
Preference number: 3 (lower is better)
Translates to: WTKSWAVVVFPS*TSLHCASSLVA
Trigger: GGCGACAAGACTGCTGGCACAGTGCAGTGAGGTTCAGCTGGGAAAGACAACCACTGCCCAGGACTTAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp CATGCTGGTCAGGATTGCAGACCGAGGCGGGGTGACTaGCATGGCTTGTGGTCTGCTGATAAGGAGGTCTTC +
Preference number: 3 (lower is better)
Translates to: HAGQDCRPRRGD*HGLWSADKEVF
Trigger: GAAGACCTCCTTATCAGCAGACCACAAGCCATGTCAGTCACCCCGCCTCGGTCTGCAATCCTGACCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp AAGCCATGTTCCAGATACTGCCGGAGCTCACCAGCATaGTTCACTAGCAACCTGAGCAGTCGCAGGGTAGCC +
Preference number: 3 (lower is better)
Translates to: KPCSRYCRSSPA*FTSNLSSRRVA
Trigger: GGCTACCCTGCGACTGCTCAGGTTGCTAGTGAAGCATGCTGGTGAGCTCCGGCAGTATCTGGAACATGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp GCAGTCGGGGTTGTCTCCAAGCCATGTTCCAGATACTaGCGGAGCTCACCAGCATGCTTCACTAGCAACCTG +
Preference number: 3 (lower is better)
Translates to: AVGVVSKPCSRY*RSSPACFTSNL
Trigger: CAGGTTGCTAGTGAAGCATGCTGGTGAGCTCCGGCAGTATCTGGAACATGGCTTGGAGACAACCCCGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp GTTGCACCCGCTGCAGGCTTGTCTTGCAGGAAGAAATaGTGGTTTCCAGCCTGCGCACCAGGTCATGCTTCT +
Preference number: 3 (lower is better)
Translates to: VAPAAGLSCRKK*WFPACAPGHAS
Trigger: AGAAGCATGACCTGGTGCGCAGGCTGGAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp GATTGGCACCACCTGCCCACTTCAGCCGCTGCTCAATaGTTGCTTCAAGGGCTGCTAGTTTCTCCTGAACCG +
Preference number: 3 (lower is better)
Translates to: DWHHLPTSAAAQ*LLQGLLVSPEP
Trigger: CGGTTCAGGAGAAACTAGCAGCCCTTGAAGCAAGCATTGAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GGCCAATCCCTCCTTGACACATCCAGGCTAAGGCCAACTGTTTTCAAAGCAGGAACCCTGGCCATGGTGTaGGGCGTATCCCTGAGTGCA +
Preference number: 3 (lower is better)
Translates to: GQSLLDTSRLRPTVFKAGTLAMV*GVSLSA
Trigger: TGCACTCAGGGATACGCCCAACACCATGGCCAGGGT...TCCTGCTTTGAAAACAGTTGGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACACTGTGCCAGCAGTCTaGTCGCCAGTGACACATTCC +
Preference number: 3 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHTVPAV*SPVTHS
Trigger: GGAATGTGTCACTGGCGACAAGACTGCTGGCACAGT...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TTTACACTGTCGACTAGGCTCTGGATGGTCTCACAGACAGTCTCTATCTGCTGCGAGGTGTGGGGAATCTaGGGCCACGCGGCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: FTLSTRLWMVSQTVSICCEVWGI*GHAAKE
Trigger: CTCCTTTGCCGCGTGGCCCAAGATTCCCCACACCTC...GCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp ACCACTTTTCATGAGGTGTCTCTGCAGGGGCAGCGGTaGTGCTCCGCACATGCTCCAAAGCAAACACGATGG +
Preference number: 3 (lower is better)
Translates to: TTFHEVSLQGQR*CSAHAPKQTRW
Trigger: CCATCGTGTTTGCTTTGGAGCATGTGCGGAGCATCACCGCTGCCCCTGCAGAGACACCTCATGAAAAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp CAATGGTGTGGCTCCATCCACCCACTGGATCAGCCCTaGTCTCGTTCCCAGTGGTGTTACAGAATAGTGGCG +
Preference number: 3 (lower is better)
Translates to: QWCGSIHPLDQP*SRSQWCYRIVA
Trigger: CGCCACTATTCTGTAACACCACTGGGAACGAGATCAGGGCTGATCCAGTGGGTGGATGGAGCCACACCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp AGGAGGTCTTCATGCTGCCACTGGAACATGGCAATGTaGAGTTGCACCCGCTGCAGGCTTGTCTTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: RRSSCCHWNMAM*SCTRCRLVLQE
Trigger: TTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CCCCCAGATGCATCACCACCGACTGTGATGTGGCTTTaGATGCCTGAGGCTGAGTTGATTCTGGTGGATGTC +
Preference number: 3 (lower is better)
Translates to: PPDASPPTVMWL*MPEAELILVDV
Trigger: GACATCCACCAGAATCAACTCAGCCTCAGGCATCCAAAGCCACATCACAGTCGGTGGTGATGCATCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CCA 72 bp GCCTCCATTAACTCCTCCAACACTGCCTTCATCACGTaGAGGGGCCAATCCCTCCTTGACACATCCAGGCTA +
Preference number: 3 (lower is better)
Translates to: ASINSSNTAFIT*RGQSLLDTSRL
Trigger: TAGCCTGGATGTGTCAAGGAGGGATTGGCCCCTCCACGTGATGAAGGCAGTGTTGGAGGAGTTAATGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp TGTGGTCTGCTGATAAGGAGGTCTTCATGCTGCCACTaGAACATGGCAATGTGCAGTTGCACCCGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: CGLLIRRSSCCH*NMAMCSCTRCR
Trigger: CCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGACCTCCTTATCAGCAGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTaGCACCACCTGCCCACTTCAGCCGCTGCTCAATGC +
Preference number: 3 (lower is better)
Translates to: LQNLVVLVPGQD*HHLPTSAAAQC
Trigger: GCATTGAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCCTGTTACGTCCAGCATaGGCCAACGTGAGAACAGAC +
Preference number: 3 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSLLRPA*ANVRTD
Trigger: GTCTGTTCTCACGTTGGCCAATGCTGGACGTAACAG...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCGGCAGCTTCCCGTTGTaGCCATCGTTTGTAAAGACC +
Preference number: 3 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSGSFPL*PSFVKT
Trigger: GGTCTTTACAAACGATGGCAACAACGGGAAGCTGCC...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACTCAGAATACCTGTGTaGCAGAGTATGAGATGGATG +
Preference number: 3 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLRIPV*QSMRWM
Trigger: CATCCATCTCATACTCTGCAACACAGGTATTCTGAG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp ACAAAACTCCCAGCCAGAGCTCATCCCAGAGTACAGTaGCCCTACGAAGCTCTGCCACAAGCATCTGGACCT +
Preference number: 3 (lower is better)
Translates to: TKLPARAHPRVQ*PYEALPQASGP
Trigger: AGGTCCAGATGCTTGTGGCAGAGCTTCGTAGGGTCACTGTACTCTGGGATGAGCTCTGGCTGGGAGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp CACTGCCTTCATCACGTGGAGGGGCCAATCCCTCCTTaGCACATCCAGGCTAAGGCCAACTGTTTTCAAAGC +
Preference number: 3 (lower is better)
Translates to: HCLHHVEGPIPP*HIQAKANCFQS
Trigger: GCTTTGAAAACAGTTGGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCCCCTCCACGTGATGAAGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp TGTGACTCTCCACCACTCATCAGGAGTGGTGCAAGATaGCCAGAGTTCCTTGGCCAGGAGATTTGGGGGTGT +
Preference number: 3 (lower is better)
Translates to: CDSPPLIRSGAR*PEFLGQEIWGC
Trigger: ACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCTGATGAGTGGTGGAGAGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp GATGCTTCACATCTCCAAGCTGCCGGTTGTGACCGGTaGGCACAGTCTTTACACTGTCGACTAGGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: DASHLQAAGCDR*AQSLHCRLGSG
Trigger: TCCAGAGCCTAGTCGACAGTGTAAAGACTGTGCTCACCGGTCACAACCGGCAGCTTGGAGATGTGAAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp CACCTTTCTGCCCCACCTATAAGCCCAACTAGCCAATaGTGCCCAAGATTTGGCTACTTCAGGTGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: HLSAPPISPTSQ*CPRFGYFRCLH
Trigger: GTGCAGGCACCTGAAGTAGCCAAATCTTGGGCAGCATTGGCTAGTTGGGCTTATAGGTGGGGCAGAAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp AGTGTCAGCAGAGTCTCTCGGCCTCGCCGCATGATGTaGAGAACCTGCTCACAGGAAAGCCTAAAAACACCT +
Preference number: 3 (lower is better)
Translates to: SVSRVSRPRRMM*RTCSQESLKTP
Trigger: AGGTGTTTTTAGGCTTTCCTGTGAGCAGGTTCTCCACATCATGCGGCGAGGCCGAGAGACTCTGCTGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CCGGTGAGCACAGTCTTTACACTGTCGACTAGGCTCTaGATGGTCTCACAGACAGTCTCTATCTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PVSTVFTLSTRL*MVSQTVSICCS
Trigger: GGAGCAGCAGATAGAGACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAGTGTAAAGACTGTGCTCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTGCTTTCTTCACCTTaGACCCTGGCCATGGTGTTG +
Preference number: 3 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHLLSSP*TLAMVL
Trigger: CAACACCATGGCCAGGGTCAAAGGTGAAGAAAGCAA...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GGCCAATCCCTCCTTGACACATCCAGGCTAAGGCCAACTGTTTTCAAAGCAGGAATGGAGCAGTCGGGGTaGTCTCCAAGCCATGTTCCA +
Preference number: 3 (lower is better)
Translates to: GQSLLDTSRLRPTVFKAGMEQSG*SPSHVP
Trigger: TGGAACATGGCTTGGAGACAACCCCGACTGCTCCAT...TCCTGCTTTGAAAACAGTTGGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAGATAGGCTTGGCCATTaGGTCTTCACTAAAGCAAGA +
Preference number: 3 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSDRLGH*VFTKAR
Trigger: TCTTGCTTTAGTGAAGACCAAATGGCCAAGCCTATC...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TCTTCATGCTGCCACTGGAACATGGCAATGTGCAGTTaGACCCGCTGCAGGCTTGTCTTGCAGGAAGAAATG +
Preference number: 3 (lower is better)
Translates to: SSCCHWNMAMCS*TRCRLVLQEEM
Trigger: CATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp GACATGGCTTGTGGTCTGCTGATAAGGAGGTCTTCATaGTGCCACTGGAACATGGCAATGTGCAGTTGCACC +
Preference number: 3 (lower is better)
Translates to: DMACGLLIRRSS*CHWNMAMCSCT
Trigger: GGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGACCTCCTTATCAGCAGACCACAAGCCATGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp TCTTGGGCCACGCGGCAAAGGAGGTTACAAATACTCTaGCGCACATACACTTCAGGGTGGTTTAAGCGTGAG +
Preference number: 3 (lower is better)
Translates to: SWATRQRRLQIL*RTYTSGWFKRE
Trigger: CTCACGCTTAAACCACCCTGAAGTGTATGTGCGCCAGAGTATTTGTAACCTCCTTTGCCGCGTGGCCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp ATGACCAGAGTTCCTTGGCCAGGAGATTTGGGGGTGTaGCCTCCATTAACTCCTCCAACACTGCCTTCATCA +
Preference number: 3 (lower is better)
Translates to: MTRVPWPGDLGV*PPLTPPTLPSS
Trigger: TGATGAAGGCAGTGTTGGAGGAGTTAATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAACCTCCTGACACGTTaGCAGCTGTTCTGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMNLLTR*QLFCGR
Trigger: TCTGCCACAGAACAGCTGCAAACGTGTCAGGAGGTT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAAAACCTCCTGACACGTTaGCAGCTGTTCTGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: NQAPSLDVRSTSCSPALENLLTR*QLFCGR
Trigger: TCTGCCACAGAACAGCTGCAAACGTGTCAGGAGGTT...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGTCGCAAGATGTAGCTaGCTCGTTTCTGCGCTCTCT +
Preference number: 3 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMVARCS*LVSALS
Trigger: AGAGAGCGCAGAAACGAGCAAGCTACATCTTGCGAC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGATGACCAGAGTTCCTaGGCCAGGAGATTTGGGGGT +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQDDQSS*ARRFGG
Trigger: ACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATCATCTACAGAAACTTaGCTTTCAGCACCAAAGTCC +
Preference number: 3 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSSSTET*LSAPKS
Trigger: GGACTTTGGTGCTGAAAGCAAAGTTTCTGTAGATGA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGCCGCTGCTCAATGCTaGCTTCAAGGGCTGCTAGTT +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQAAAQC*LQGLLV
Trigger: AACTAGCAGCCCTTGAAGCAAGCATTGAGCAGCGGC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGTGCAGGCAGTGAGCTaGCTTTCTTCACCTTTGACC +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQVQAVS*LSSPLT
Trigger: GGTCAAAGGTGAAGAAAGCAAGCTCACTGCCTGCAC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACCCATTTTTCATCCACTaGGCCTTGAGTGGACAGTTT +
Preference number: 3 (lower is better)
Translates to: ASKSCSTGARAGLAPPAHPFFIH*ALSGQF
Trigger: AAACTGTCCACTCAAGGCCAAGTGGATGAAAAATGG...GTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AATGATGTCAACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCAATGCTGCCCAAGATTaGGCTACTTCAGGTGCCTGC +
Preference number: 3 (lower is better)
Translates to: NDVNTQGTDKATQCESEGNAAQD*ATSGAC
Trigger: GCAGGCACCTGAAGTAGCCAAATCTTGGGCAGCATT...GCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTCAGCTGTAAAGGCCTaGATAGGCTTGGCCATTTGG +
Preference number: 3 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSAVKA*IGLAIW
Trigger: CCAAATGGCCAAGCCTATCAAGGCCTTTACAGCTGA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp TGGATGCCTGAGGCTGAGTTGATTCTGGTGGATGTCTaGCCTCGCTTAACCAGACTCATCTACTGTCTTGCC +
Preference number: 3 (lower is better)
Translates to: WMPEAELILVDV*PRLTRLIYCLA
Trigger: GGCAAGACAGTAGATGAGTCTGGTTAAGCGAGGTCAGACATCCACCAGAATCAACTCAGCCTCAGGCATCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR TCA 72 bp TCCGCAGCAGCCCGATTTCTTTCTCAGCTAACCTCCTaGCACGTTTGCAGCTGTTCTGTGGCAGAAAGACAA +
Preference number: 3 (lower is better)
Translates to: SAAARFLSQLTS*HVCSCSVAERQ
Trigger: TTGTCTTTCTGCCACAGAACAGCTGCAAACGTGTCAGGAGGTTAGCTGAGAAAGAAATCGGGCTGCTGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR TCA 72 bp TTCAAGAGATGCTTCACATCTCCAAGCTGCCGGTTGTaGCCGGTGAGCACAGTCTTTACACTGTCGACTAGG +
Preference number: 3 (lower is better)
Translates to: FKRCFTSPSCRL*PVSTVFTLSTR
Trigger: CCTAGTCGACAGTGTAAAGACTGTGCTCACCGGTCACAACCGGCAGCTTGGAGATGTGAAGCATCTCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp ATAGTTATCCTGAAACCACTTTTCATGAGGTGTCTCTaGAGGGGCAGCGGTGATGCTCCGCACATGCTCCAA +
Preference number: 3 (lower is better)
Translates to: IVILKPLFMRCL*RGSGDAPHMLQ
Trigger: TTGGAGCATGTGCGGAGCATCACCGCTGCCCCTGCAGAGACACCTCATGAAAAGTGGTTTCAGGATAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTaGTCTCCAGCACTTGAAGCTGCACCTTCCATCATA +
Preference number: 3 (lower is better)
Translates to: NQAPSLDVRSTS*SPALEAAPSII
Trigger: TATGATGGAAGGTGCAGCTTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CCAGGAAAACCGAGCTTCTCAACAGTTGGACTTCAATaGATTTCTGAAGCTCCCGTGGGTCTGGGCTTAGCA +
Preference number: 3 (lower is better)
Translates to: PGKPSFSTVGLQ*ISEAPVGLGLA
Trigger: TGCTAAGCCCAGACCCACGGGAGCTTCAGAAATCCATTGAAGTCCAACTGTTGAGAAGCTCGGTTTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp AGTACAGTGACCCTACGAAGCTCTGCCACAAGCATCTaGACCTGTAAAACCATCGTTGGGTTGGCAGAGGAA +
Preference number: 3 (lower is better)
Translates to: STVTLRSSATSI*TCKTIVGLAEE
Trigger: TTCCTCTGCCAACCCAACGATGGTTTTACAGGTCCAGATGCTTGTGGCAGAGCTTCGTAGGGTCACTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GTTGTTGCCATCGTTTGTAAAGACCAAACAATGGTGTaGCTCCATCCACCCACTGGATCAGCCCTGATCTCG +
Preference number: 3 (lower is better)
Translates to: VVAIVCKDQTMV*LHPPTGSALIS
Trigger: CGAGATCAGGGCTGATCCAGTGGGTGGATGGAGCCACACCATTGTTTGGTCTTTACAAACGATGGCAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAATGTGGTTTAAAGCAGTaGCCAGGAAAACCGAGCTTC +
Preference number: 3 (lower is better)
Translates to: NQAPSLDVRSTSCSPALECGLKQ*PGKPSF
Trigger: GAAGCTCGGTTTTCCTGGCAACTGCTTTAAACCACA...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AATGATGTCAACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCTTGCGCAAGGTGTTGTaGTTCTGGACTCTCTTCACC +
Preference number: 3 (lower is better)
Translates to: NDVNTQGTDKATQCESEGLRKVL*FWTLFT
Trigger: GGTGAAGAGAGTCCAGAACAACAACACCTTGCGCAA...GCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACTGCTCCTTCTCTGTTaGAACAGCTCTTTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQLLLLC*NSSLGG
Trigger: TCCACCCAAAGAGCTGTTCAAACAGAGAAGGAGCAG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGACTCATCTACTGTCTaGCCATTCACACCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQDSSTV*PFTPKL
Trigger: CAGCTTGGGTGTGAATGGCAAGACAGTAGATGAGTC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp CCCAAAAGCAGGCAAAGTACAGTGACTGCCTCCTCTTaGATCTTTGCACAGCATTGTGATGCTCACCAGCAC +
Preference number: 3 (lower is better)
Translates to: PKSRQSTVTASS*IFAQHCDAHQH
Trigger: GTGCTGGTGAGCATCACAATGCTGTGCAAAGATTCAAGAGGAGGCAGTCACTGTACTTTGCCTGCTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 72 bp TCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTaGAGCTGCACCTTCCATCATAAGGTTACGCCTTGT +
Preference number: 3 (lower is better)
Translates to: SGCQINQLLSST*SCTFHHKVTPC
Trigger: ACAAGGCGTAACCTTATGATGGAAGGTGCAGCTTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp CCAGGTGGCACTGCTTCAGTAACTGCACCAAGCAGGTaGCATTTCCACTCATACTACACAGCTCCTCTAGAA +
Preference number: 3 (lower is better)
Translates to: PGGTASVTAPSR*HFHSYYTAPLE
Trigger: TTCTAGAGGAGCTGTGTAGTATGAGTGGAAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTGCCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TTGCCCTGCAGTTTTTCAACATCTGTGAGCTGCTCCTaGAGGCTTAGGTATTCATCTAAGCTGCTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: LPCSFSTSVSCS*RLRYSSKLLSS
Trigger: GCTGGACAGCAGCTTAGATGAATACCTAAGCCTGCAGGAGCAGCTCACAGATGTTGAAAAACTGCAGGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp AAGTCCTGTGGTACCAGGTGGCACTGCTTCAGTAACTaGACCAAGCAGGTGACATTTCCACTCATACTACAC +
Preference number: 3 (lower is better)
Translates to: KSCGTRWHCFSN*TKQVTFPLILH
Trigger: GTGTAGTATGAGTGGAAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTGCCACCTGGTACCACAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TTGGGAATATCCAAGTCCTGTGGTACCAGGTGGCACTaGTTCAGTAACTGCACCAAGCAGGTGACATTTCCA +
Preference number: 3 (lower is better)
Translates to: LGISKSCGTRWH*FSNCTKQVTFP
Trigger: TGGAAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTGCCACCTGGTACCACAGGACTTGGATATTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGTTTCTGAGCGGGGTTaGTTTTCCTGGATTGTACAC +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQVSERG*FSWIVH
Trigger: GTGTACAATCCAGGAAAACAAACCCCGCTCAGAAAC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAGTGATCAACAAGCTTaGAAGTCCTTGGCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSDQQA*KSLAAL
Trigger: AAGAGCAGCCAAGGACTTCAAAGCTTGTTGATCACT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAACCTGGAAAGGCTATTaGAACAGGAAGCCAAGGGTT +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQTWKGY*NRKPRV
Trigger: AACCCTTGGCTTCCTGTTCAAATAGCCTTTCCAGGT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCAAAATGTGATGTCATaGCCACCTGACATTCCAGGT +
Preference number: 3 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMQNVMS*PPDIPG
Trigger: ACCTGGAATGTCAGGTGGCAATGACATCACATTTTG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CAA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATAGTCCTGGGCAGTGGTaGTCTTTCCCAGCTGAACCT +
Preference number: 3 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYSPGQW*SFPAEP
Trigger: AGGTTCAGCTGGGAAAGACAACCACTGCCCAGGACT...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AATGATGTCAACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCAAGGCCTTGATAGGCTaGGCCATTTGGTCTTCACTA +
Preference number: 3 (lower is better)
Translates to: NDVNTQGTDKATQCESEGKALIG*AIWSSL
Trigger: TAGTGAAGACCAAATGGCCAAGCCTATCAAGGCCTT...GCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp TTGTTCTGGACTCTCTTCACCTCGTCCTCCAGTTGCTaGATTCGTCTCAGGACATACATGTGCTGCTGTAAC +
Preference number: 3 (lower is better)
Translates to: LFWTLFTSSSSC*IRLRTYMCCCN
Trigger: GTTACAGCAGCACATGTATGTCCTGAGACGAATTCAGCAACTGGAGGACGAGGTGAAGAGAGTCCAGAACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TGGTCTTCGTCTGCGTCTGAACACAGGAAACAAAGATaGTTCAGGGTGGTAGTTCTAAGGGCTAGGATGTAC +
Preference number: 3 (lower is better)
Translates to: WSSSASEHRKQR*FRVVVLRARMY
Trigger: GTACATCCTAGCCCTTAGAACTACCACCCTGAAGCATCTTTGTTTCCTGTGTTCAGACGCAGACGAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR GCA 72 bp TGTCCCAAAATGAAGTCAGGTTCTCCAACTCCAATATaGACTGTAGACTCACTCTCAATCCGAGGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: CPKMKSGSPTPI*TVDSLSIRGCS
Trigger: GGAGCACCCTCGGATTGAGAGTGAGTCTACAGTGCATATTGGAGTTGGAGAACCTGACTTCATTTTGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp CACATGCTCCAAAGCAAACACGATGGGCTTCATCAGTaGTGTGTGCTTCTCTCGCATGATGGCAATTTTCTC +
Preference number: 3 (lower is better)
Translates to: HMLQSKHDGLHQ*CVLLSHDGNFL
Trigger: GAGAAAATTGCCATCATGCGAGAGAAGCACACAGCACTGATGAAGCCCATCGTGTTTGCTTTGGAGCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TGTCTGACCTCGCTTAACCAGACTCATCTACTGTCTTaGCATTCACACCCAAGCTGTCCAACCTTCATACAG +
Preference number: 3 (lower is better)
Translates to: CLTSLNQTHLLS*HSHPSCPTFIQ
Trigger: CTGTATGAAGGTTGGACAGCTTGGGTGTGAATGGCAAGACAGTAGATGAGTCTGGTTAAGCGAGGTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp TTCAGCAGCCATTCCCAGTTGGCTGTCCTACTCTCTTaGCACACTGAACGCAATACTATACACATTTTGCCC +
Preference number: 3 (lower is better)
Translates to: FSSHSQLAVLLS*HTERNTIHILP
Trigger: GGGCAAAATGTGTATAGTATTGCGTTCAGTGTGCCAAGAGAGTAGGACAGCCAACTGGGAATGGCTGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
3UTR-3UTR CAA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTGTGCAGGCAGTGAGCTaGCTTTCTTCACCTTTGACC +
Preference number: 3 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEIVQAVS*LSSPLT
Trigger: GGTCAAAGGTGAAGAAAGCAAGCTCACTGCCTGCAC...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGCTAGATTCTTTAACTaGTCAGCAGACATGTGGAGA +
Preference number: 3 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMARFFN*SADMWR
Trigger: TCTCCACATGTCTGCTGACAAGTTAAAGAATCTAGC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CAA 90 bp AAATCTTGTAGTACTGGTGCCAGGGCAGGATTGGCACCACCTGCCCACTTCAGCTTTCAAACGTTCCACTaGTCTAATAAGTCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: KSCSTGARAGLAPPAHFSFQTFH*SNKSAV
Trigger: AACAGCAGACTTATTAGACAAGTGGAACGTTTGAAA...GCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAATTTCTTCCAGCAGTTaGCCCTGCAGTTTTTCAACA +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQISSSS*PCSFST
Trigger: TGTTGAAAAACTGCAGGGCAAACTGCTGGAAGAAAT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATCTCTTGAAGCAAACTaGCAAGCTGAGTTGCTTCTA +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQSLEAN*QAELLL
Trigger: TAGAAGCAACTCAGCTTGCAAGTTTGCTTCAAGAGA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AATGATGTCAACACCCAGGGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCTCTGAAATATGGCTTTaGGATACTGCAGAGCAACTG +
Preference number: 3 (lower is better)
Translates to: NDVNTQGTDKATQCESEGSEIWL*DTAEQL
Trigger: CAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGA...GCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCCCTGGGTGTTGACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACATTTCAACATGTTCTaGACTTCGAACCTGACCCAT +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQHFNMF*TSNLTH
Trigger: ATGGGTCAGGTTCGAAGTCAAGAACATGTTGAAATG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp AGTGACTGCCTCCTCTTGAATCTTTGCACAGCATTGTaGTGCTCACCAGCACTATTAGGAATCTACCTACCC +
Preference number: 3 (lower is better)
Translates to: SDCLLLNLCTAL*CSPALLGIYLP
Trigger: GGGTAGGTAGATTCCTAATAGTGCTGGTGAGCATCACAATGCTGTGCAAAGATTCAAGAGGAGGCAGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 72 bp ACTTTGCTTTCAGCACCAAAGTCCTTTGCCTCTACCTaGGCAATGATGTCAACACCCAGGGCACTGATAAAG +
Preference number: 3 (lower is better)
Translates to: TLLSAPKSFAST*AMMSTPRALIK
Trigger: CTTTATCAGTGCCCTGGGTGTTGACATCATTGCTCAGGTAGAGGCAAAGGACTTTGGTGCTGAAAGCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp TCTCCTGAACCGTCCCAATTGAAGTCTCAATCTGACTaGGAGCATGCAGTTTCTTCTTCATGCTGGTCAGGA +
Preference number: 3 (lower is better)
Translates to: SPEPSQLKSQSD*EHAVSSSCWSG
Trigger: TCCTGACCAGCATGAAGAAGAAACTGCATGCTCTCAGTCAGATTGAGACTTCAATTGGGACGGTTCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp CTTGACTTCGAACCTGACCCATGGCCTGGACTAGTGTaGACAAAACCGTCTGAATGTTGTCTTGCCATGATT +
Preference number: 3 (lower is better)
Translates to: LDFEPDPWPGLV*TKPSECCLAMI
Trigger: AATCATGGCAAGACAACATTCAGACGGTTTTGTTCACACTAGTCCAGGCCATGGGTCAGGTTCGAAGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TCAAGTTCAGAAAGCCAAGGGCAGCTTGATATTAACTaGCGCCAGATAACATCGACCATGTCATCGTCCTCA +
Preference number: 3 (lower is better)
Translates to: SSSESQGQLDIN*RQITSTMSSSS
Trigger: TGAGGACGATGACATGGTCGATGTTATCTGGCGGCAGTTAATATCAAGCTGCCCTTGGCTTTCTGAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp ATCTACAGAAACTTTGCTTTCAGCACCAAAGTCCTTTaGCTCTACCTGAGCAATGATGTCAACACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: IYRNFAFSTKVL*LYLSNDVNTQG
Trigger: GCCCTGGGTGTTGACATCATTGCTCAGGTAGAGGCAAAGGACTTTGGTGCTGAAAGCAAAGTTTCTGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GATAAAGCTACACAATGTGAGTCCGAGGGCTTGGTTTaGGAGTCCTATCAAGAGCTGTCTTACAAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: DKATQCESEGLV*ESYQELSYKVS
Trigger: GCTGACTTTGTAAGACAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGACTCACATTGTGTAGCTTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GCACTGATAAAGCTACACAATGTGAGTCCGAGGGCTTaGTTTGGGAGTCCTATCAAGAGCTGTCTTACAAAG +
Preference number: 3 (lower is better)
Translates to: ALIKLHNVSPRA*FGSPIKSCLTK
Trigger: CTTTGTAAGACAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGACTCACATTGTGTAGCTTTATCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp GATTCTGTCCACAACTTTCCGCCACACTTTAATAACACCTTCAGTTGCATTTTCGCCAGAAAGGTTCTGTaGCTGCTGAGCTCTGTACAC +
Preference number: 3 (lower is better)
Translates to: DSVHNFPPHFNNTFSCIFARKVL*LLSSVH
Trigger: GTGTACAGAGCTCAGCAGCAACAGAACCTTTCTGGC...GAAAATGCAACTGAAGGTGTTATTAAAGTGTGGCGGAAAGTTGTGGACAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp AACCAGGCTCCATCTCTGGATGTCAGATCAACCAGCTGCTCTCCAGCACTTGAATATTTCCAAGTAAAGTaGGGATTGCAGAGGAATACT +
Preference number: 3 (lower is better)
Translates to: NQAPSLDVRSTSCSPALEYFQVK*GLQRNT
Trigger: AGTATTCCTCTGCAATCCCAACTTTACTTGGAAATA...TTCAAGTGCTGGAGAGCAGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CAACATCAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATGGCTGTGTTTCGCTGCTCTCCAGCACTaGAAGCTGCACCTTCCATCA +
Preference number: 3 (lower is better)
Translates to: QHQYNEHEFLLQVPWLCFAALQH*KLHLPS
Trigger: TGATGGAAGGTGCAGCTTCAAGTGCTGGAGAGCAGC...GAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp ATCACTATCACATCATCAGTGCTCTGCTCTGCTCTGTaGCTTAAATGGAGCCTGGGATCATCCTCATCTAAC +
Preference number: 3 (lower is better)
Translates to: ITITSSVLCSAL*LKWSLGSSSSN
Trigger: GTTAGATGAGGATGATCCCAGGCTCCATTTAAGTCACAGAGCAGAGCAGAGCACTGATGATGTGATAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp TCCAAAGCAAACACGATGGGCTTCATCAGTGCTGTGTaGTTCTCTCGCATGATGGCAATTTTCTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: SKANTMGFISAV*FSRMMAIFSSL
Trigger: CAAAGAAGAGAAAATTGCCATCATGCGAGAGAAGCACACAGCACTGATGAAGCCCATCGTGTTTGCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CCATCAGTAGTCTGCTCGATCAGACTATCTAGTTCATaGAGCATACTTTCTAAGGTGCACTCCCCCTTCATT +
Preference number: 3 (lower is better)
Translates to: PSVVCSIRLSSS*SILSKVHSPFI
Trigger: AATGAAGGGGGAGTGCACCTTAGAAAGTATGCTCCATGAACTAGATAGTCTGATCGAGCAGACTACTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACTGCCAATCACCCTGTaGTGGAAAAATAAAATTTCA +
Preference number: 3 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQLPITL*WKNKIS
Trigger: TGAAATTTTATTTTTCCACAACAGGGTGATTGGCAG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CAA 90 bp GATTCTGTCCACAACTTTCCGCCACACTTTAATAACACCTTCAGTTGCATTTTCAAATCGGCTTTCAGATaGAGTGAGGTGCTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: DSVHNFPPHFNNTFSCIFKSAFR*SEVLLE
Trigger: CTCCAGCAGCACCTCACTCAATCTGAAAGCCGATTT...GAAAATGCAACTGAAGGTGTTATTAAAGTGTGGCGGAAAGTTGTGGACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATGCACTGCAAGACAATTaGTACAGGCTGAAGATTCTG +
Preference number: 3 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYALQDN*YRLKIL
Trigger: CAGAATCTTCAGCCTGTACAAATTGTCTTGCAGTGC...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp GTACTGTTGCCGAGCAACAAATGTTTCTCAAGAATCTaGATGCAACAACTCTTCCGTGGCTGTGAGTTCTTC +
Preference number: 3 (lower is better)
Translates to: VLLPSNKCFSRI*MQQLFRGCEFF
Trigger: GAAGAACTCACAGCCACGGAAGAGTTGTTGCATTCAGATTCTTGAGAAACATTTGTTGCTCGGCAACAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR TCA 72 bp TTAGTTGGTAAGATGGTGATAGTTCCACCCACACTGTaGATTGTCACAGTATCTCTGGCTGAGACTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LVGKMVIVPPTL*IVTVSLAETSP
Trigger: TGGAGAAGTCTCAGCCAGAGATACTGTGACAATTCACAGTGTGGGTGGAACTATCACCATCTTACCAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp ACTGTGACGCAAATGAACACATCTGCTGACACCGTTTaGTTAGTTCAAATAAGGCAGCATCCAGGCTTAAGG +
Preference number: 3 (lower is better)
Translates to: TVTQMNTSADTV*LVQIRQHPGLR
Trigger: CCTTAAGCCTGGATGCTGCCTTATTTGAACTAATCAAACGGTGTCAGCAGATGTGTTCATTTGCGTCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp GCCATTCACACCCAAGCTGTCCAACCTTCATACAGCTaGGCCAAGTTATCTAGATTAGTTGCTTCCTTAATG +
Preference number: 3 (lower is better)
Translates to: AIHTQAVQPSYS*AKLSRLVASLM
Trigger: CATTAAGGAAGCAACTAATCTAGATAACTTGGCTCAGCTGTATGAAGGTTGGACAGCTTGGGTGTGAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp ACGTTCCACTTGTCTAATAAGTCTGCTGTTTATGTCTaGTGCATACCGCTGAAGGGTCATTTCAGTAGCAGT +
Preference number: 3 (lower is better)
Translates to: TFHLSNKSAVYV*CIPLKGHFSSS
Trigger: ACTGCTACTGAAATGACCCTTCAGCGGTATGCAGCAGACATAAACAGCAGACTTATTAGACAAGTGGAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp CCACAGCTTTCTTACACAGATCATCTACAGAAACTTTaGTTTCAGCACCAAAGTCCTTTGCCTCTACCTGAG +
Preference number: 3 (lower is better)
Translates to: PQLSYTDHLQKL*FQHQSPLPLPE
Trigger: CTCAGGTAGAGGCAAAGGACTTTGGTGCTGAAAGCAAAGTTTCTGTAGATGATCTGTGTAAGAAAGCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CCACAAGCATCTGGACCTGTAAAACCATCGTTGGGTTaGCAGAGGAAAGTTTATCTACAATTTTGCTGTAGC +
Preference number: 3 (lower is better)
Translates to: PQASGPVKPSLG*QRKVYLQFCCS
Trigger: GCTACAGCAAAATTGTAGATAAACTTTCCTCTGCCAACCCAACGATGGTTTTACAGGTCCAGATGCTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GGTCATTTCAGTAGCAGTAATGAACTGACACACTGTTaGAGGTGGCTGAGGAGCATACTGCATTTCATACTT +
Preference number: 3 (lower is better)
Translates to: GHFSSSNELTHC*RWLRSILHFIL
Trigger: AAGTATGAAATGCAGTATGCTCCTCAGCCACCTCCAACAGTGTGTCAGTTCATTACTGCTACTGAAATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GCTCTGTTCATCACCAACTGTGAGAATTTCCCTACCTaGATATTGTGCTCCACAGCTTTCTTACACAGATCA +
Preference number: 3 (lower is better)
Translates to: ALFITNCENFPT*ILCSTAFLHRS
Trigger: TGATCTGTGTAAGAAAGCTGTGGAGCACAATATCCAGGTAGGGAAATTCTCACAGTTGGTGATGAACAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATAAAGTCCTAATGACCTaGGGAGGTGATGTTAATGCA +
Preference number: 3 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYKVLMT*GGDVNA
Trigger: TGCATTAACATCACCTCCCAAGGTCATTAGGACTTT...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTTTTCCATTGCATGTGTaGACTGGCCTGCTGTATATA +
Preference number: 3 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEIFPLHV*TGLLYI
Trigger: TATATACAGCAGGCCAGTCAACACATGCAATGGAAA...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp ATACTCCATTGGCTAAATGAACAGCCTCAGATGCTTCCACTGGGTTGGGAATATGCAATTTTCTCTTCTTaGCGCAAGGTGTTGTTGTTC +
Preference number: 3 (lower is better)
Translates to: ILHWLNEQPQMLPLGWEYAIFSS*RKVLLF
Trigger: GAACAACAACACCTTGCGCAAAGAAGAGAAAATTGC...ATATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TGTGTTGCAGAGTATGAGATGGATGGTCCACTCCTTCAGCTCCTTCTAGAAATTCTCAGCATTATCTCTTaGAATGGAATCCAGCTGCTT +
Preference number: 3 (lower is better)
Translates to: CVAEYEMDGPLLQLLLEILSIIS*NGIQLL
Trigger: AAGCAGCTGGATTCCATTCAAAGAGATAATGCTGAG...AATTTCTAGAAGGAGCTGAAGGAGTGGACCATCCATCTCATACTCTGCAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp TCCATCCAGGCCTTCCACTGTTCAATTCGATGTTTCTaGAATATGGCTTTTGGATACTGCAGAGCAACTGTT +
Preference number: 3 (lower is better)
Translates to: SIQAFHCSIRCF*NMAFGYCRATV
Trigger: AACAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGAAACATCGAATTGAACAGTGGAAGGCCTGGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp AATTCCTGCAGAGATGTATATACTCCATTGGCTAAATaGACAGCCTCAGATGCTTCCACTGGGTTGGGAATA +
Preference number: 3 (lower is better)
Translates to: NSCRDVYTPLAK*TASDASTGLGI
Trigger: TATTCCCAACCCAGTGGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGTATATACATCTCTGCAGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp GAACTGTTGAACTGTGACGCAAATGAACACATCTGCTaGCACCGTTTGATTAGTTCAAATAAGGCAGCATCC +
Preference number: 3 (lower is better)
Translates to: ELLNCDANEHIC*HRLISSNKAAS
Trigger: GGATGCTGCCTTATTTGAACTAATCAAACGGTGTCAGCAGATGTGTTCATTTGCGTCACAGTTCAACAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp GTAATAAACGAAGCTCTAACTCGGAAACTGAACTGTTaGACTGTGACGCAAATGAACACATCTGCTGACACC +
Preference number: 3 (lower is better)
Translates to: VINEALTRKLNC*TVTQMNTSADT
Trigger: GGTGTCAGCAGATGTGTTCATTTGCGTCACAGTTCAACAGTTCAGTTTCCGAGTTAGAGCTTCGTTTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CTGAAATTCATACAGCATAGCCTTTTGGTACTTAACTaGTCAACCCAACCAGTACTGTTGCCGAGCAACAAA +
Preference number: 3 (lower is better)
Translates to: LKFIQHSLLVLN*STQPVLLPSNK
Trigger: TTTGTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CCA 72 bp TTCAGTAGCAGTAATGAACTGACACACTGTTGGAGGTaGCTGAGGAGCATACTGCATTTCATACTTCCTATA +
Preference number: 3 (lower is better)
Translates to: FSSSNELTHCWR*LRSILHFILPI
Trigger: TATAGGAAGTATGAAATGCAGTATGCTCCTCAGCCACCTCCAACAGTGTGTCAGTTCATTACTGCTACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR-3UTR CAA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAACCCAACCAGTACTGTaGCCGAGCAACAAATGTTTC +
Preference number: 3 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLTQPVL*PSNKCF
Trigger: GAAACATTTGTTGCTCGGCAACAGTACTGGTTGGGT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR TCA 72 bp AAGGGTTTTATCCAGAGTGCAGTGATCAACAAGCTTTaGAGTCCTTGGCTGCTCTTATCTGCACTATTCTTT +
Preference number: 3 (lower is better)
Translates to: KGFIQSAVINKL*SPWLLLSALFF
Trigger: AAAGAATAGTGCAGATAAGAGCAGCCAAGGACTTCAAAGCTTGTTGATCACTGCACTCTGGATAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 72 bp TCAACATATAAAACAATGTTGGTCTTCGTCTGCGTCTaGACACAGGAAACAAAGATGCTTCAGGGTGGTAGT +
Preference number: 3 (lower is better)
Translates to: STYKTMLVFVCV*TQETKMLQGGS
Trigger: ACTACCACCCTGAAGCATCTTTGTTTCCTGTGTTCAGACGCAGACGAAGACCAACATTGTTTTATATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR GCA 72 bp TTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTaGCGAGCAACAAATGTTTCTCAAGAATCTGAATGC +
Preference number: 3 (lower is better)
Translates to: FWYLTGQPNQYC*RATNVSQESEC
Trigger: GCATTCAGATTCTTGAGAAACATTTGTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR GCA 72 bp ATCACCAACTGTGAGAATTTCCCTACCTGGATATTGTaGTCCACAGCTTTCTTACACAGATCATCTACAGAA +
Preference number: 3 (lower is better)
Translates to: ITNCENFPTWIL*STAFLHRSSTE
Trigger: TTCTGTAGATGATCTGTGTAAGAAAGCTGTGGAGCACAATATCCAGGTAGGGAAATTCTCACAGTTGGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GTTGGGATTGCAGAGGAATACTTATTTCCTGAAGCCTaGGATTCACTGCTAAGTGATATGGTTCCTACTATT +
Preference number: 3 (lower is better)
Translates to: VGIAEEYLFPEA*DSLLSDMVPTI
Trigger: AATAGTAGGAACCATATCACTTAGCAGTGAATCCCAGGCTTCAGGAAATAAGTATTCCTCTGCAATCCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp CAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATaGCTGTGTTTCGCAAGTAGGCTTGAAGTGACTCAA +
Preference number: 3 (lower is better)
Translates to: QYNEHEFLLQVP*LCFASRLEVTQ
Trigger: TTGAGTCACTTCAAGCCTACTTGCGAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp CTAAGACTGCACATCAACTCTAATATTTGGCTGCATTaGCCTGCTTGGCATTTATTAAATGGCTCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: LRLHINSNIWLH*PAWHLLNGSFL
Trigger: AAGGAAAGAGCCATTTAATAAATGCCAAGCAGGGCAATGCAGCCAAATATTAGAGTTGATGTGCAGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR-3UTR CAA 90 bp CAACATCAATATAATGAGCATGAGTTTCTTCTTCAAGTCCCATGGCTGTGTTTCTGCTGTTTCAATGTTTaGTGTCATTCGAAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: QHQYNEHEFLLQVPWLCFCCFNV*CHSKRH
Trigger: GTGCCTTTTCGAATGACACAAAACATTGAAACAGCA...GAAACACAGCCATGGGACTTGAAGAAGAAACTCATGCTCATTATATTGATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp AATCTATGTGAACTACTTCTCCAGTTGTCATATCTATaGGGACATTATCCAGATGTCTGTCTCCAAGACCAA +
Preference number: 3 (lower is better)
Translates to: NLCELLLQLSYL*GHYPDVCLQDQ
Trigger: TTGGTCTTGGAGACAGACATCTGGATAATGTCCTCATAGATATGACAACTGGAGAAGTAGTTCACATAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp GAAGCAAACTTGCAAGCTGAGTTGCTTCTAAGTTATTaGATGCAGCCTGATAATGTGTTATCCACTGTTCAA +
Preference number: 3 (lower is better)
Translates to: EANLQAELLLSY*MQPDNVLSTVQ
Trigger: TTGAACAGTGGATAACACATTATCAGGCTGCATTCAATAACTTAGAAGCAACTCAGCTTGCAAGTTTGCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CCA 72 bp GCAAATTTTGCTGCTGTCAGACCTAACTCCATGAGATaGCTTCTAATTGGTACTGTTTGCTCTTTAATTTTC +
Preference number: 3 (lower is better)
Translates to: ANFAAVRPNSMR*LLIGTVCSLIF
Trigger: GAAAATTAAAGAGCAAACAGTACCAATTAGAAGCCATCTCATGGAGTTAGGTCTGACAGCAGCAAAATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp AGAAAAACTTTAATGCAACGCTCAATTTCTTTCAACTaGTCTTCACAAACTGGCACAGTGACAGCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: RKTLMQRSISFN*SSQTGTVTASC
Trigger: ACAAGAAGCTGTCACTGTGCCAGTTTGTGAAGATCAGTTGAAAGAAATTGAGCGTTGCATTAAAGTTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR TCA 72 bp ATGATGTTGGACTTGAACATTCATTTGCTGCATCGGTaGCTAGGGGTGATGCAAAACTCACTAAATTATTAT +
Preference number: 3 (lower is better)
Translates to: MMLDLNIHLLHR*LGVMQNSLNYY
Trigger: ATAATAATTTAGTGAGTTTTGCATCACCCCTAGTCACCGATGCAGCAAATGAATGTTCAAGTCCAACATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR GCA 72 bp ATGAAATCAGTGTCTGTTAGACTCATTACGTTTGGATaGACAGTGACAATTCAGGAAACTGTACATGATAGA +
Preference number: 3 (lower is better)
Translates to: MKSVSVRLITFG*TVTIQETVHDR
Trigger: TCTATCATGTACAGTTTCCTGAATTGTCACTGTGCATCCAAACGTAATGAGTCTAACAGACACTGATTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR GCA 72 bp GATCAACAAGCTTTGAAGTCCTTGGCTGCTCTTATCTaGACTATTCTTTTCTCAAAGACCAGTTTAACATTT +
Preference number: 3 (lower is better)
Translates to: DQQALKSLAALI*TILFSKTSLTF
Trigger: AAATGTTAAACTGGTCTTTGAGAAAAGAATAGTGCAGATAAGAGCAGCCAAGGACTTCAAAGCTTGTTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 72 bp CAGAACTATATTCTTTGCCATCTTCAAATAGCCAGCTaGTTTGAGTTTTTAACATTAGCACTAGAACTTCCC +
Preference number: 3 (lower is better)
Translates to: QNYILCHLQIAS*FEFLTLALELP
Trigger: GGGAAGTTCTAGTGCTAATGTTAAAAACTCAAATCAGCTGGCTATTTGAAGATGGCAAAGAATATAGTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR TCA 72 bp ACTAATCGAAATACATTTCAATTCTCAAGGGTACTCTaGAATAATAGAGGTTGTTCTGTACCCTCTGAATCT +
Preference number: 3 (lower is better)
Translates to: TNRNTFQFSRVL*NNRGCSVPSES
Trigger: AGATTCAGAGGGTACAGAACAACCTCTATTATTTCAGAGTACCCTTGAGAATTGAAATGTATTTCGATTAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAACCACCCAGACACCTaGTGTGTGAGGGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPNHPDT*CVREGF
Trigger: GAAACCCTCCCTCACACAGCAGGTGTCTGGGTGGTT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACCAGCTGAACCTCACTaGACTGTGCCAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPPAEPH*TVPAVL
Trigger: CAAGACTGCTGGCACAGTGCAGTGAGGTTCAGCTGG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCTCGCTTACTCTGCTTaGTCTCAGCCTGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLLAYSA*SQPAGH
Trigger: GTGGCCAGCAGGCTGAGAGCAAGCAGAGTAAGCGAG...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATGCAGTTGCACCCGCTaGAGGCTTGTCTTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPCSCTR*RLVLQE
Trigger: TTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGCTCCATCCACCCACTaGATCAGCCCTGATCTCGTT +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPAPSTH*ISPDLV
Trigger: AACGAGATCAGGGCTGATCCAGTGGGTGGATGGAGC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTCCGCGGGTACTTGGTaGCGCCGCCGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNSAGTW*RRRRCS
Trigger: TGAGCAGCGGCGGCGGCGGCACCAAGTACCCGCGGA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGAACCTCACTGCACTGTaGCAGCAGTCTTGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLNLTAL*QQSCRQ
Trigger: CTGGCGACAAGACTGCTGGCACAGTGCAGTGAGGTT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACCATGTTCCAGATACTaGCGGAGCTCACCAGCATGC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSPCSRY*RSSPAC
Trigger: GCATGCTGGTGAGCTCCGGCAGTATCTGGAACATGG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAACCATAGACAGCACCTaGAAACCCAGCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSTIDST*KPSLTT
Trigger: GGTGGTGAGGCTGGGTTTGCAGGTGCTGTCTATGGT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAGCTGCTTCCAGGCTTaGCAGGATTTGATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPSCFQA*QDLMAS
Trigger: AGACGCCATCAAATCCTGCCAAGCCTGGAAGCAGCT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGCTGCCACTGGAACATaGCAATGTGCAGTTGCACCC +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLAATGT*QCAVAP
Trigger: GGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATCGCATAGGACTGTGTaGCTCTCCACCACTCATCAG +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSSHRTV*LSTTHQ
Trigger: CTGATGAGTGGTGGAGAGTCACACAGTCCTATGCGA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAACTGTTGGAGGTGGCTaGGGAGCATACTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPTVGGG*GAYCIS
Trigger: TGAAATGCAGTATGCTCCTCAGCCACCTCCAACAGT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATCCTTTGCCTCTACCTaGGCAATGATGTCAACACCC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPSFAST*AMMSTP
Trigger: GGGTGTTGACATCATTGCTCAGGTAGAGGCAAAGGA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCCGAGGCGGGGTGACTaGCATGGCTTGTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMPRRGD*HGLWSA
Trigger: AGCAGACCACAAGCCATGTCAGTCACCCCGCCTCGG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGATGGGCTTCATCAGTaGTGTGTGCTTCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPDGLHQ*CVLLSH
Trigger: ATGCGAGAGAAGCACACAGCACTGATGAAGCCCATC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAATCTCTCGCTTACTCTaGTTGCTCTCAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSISRLL*LLSACW
Trigger: CCAGCAGGCTGAGAGCAAGCAGAGTAAGCGAGAGAT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGTATGCCTCTGTAATTaGTGGACCCCGAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPVCLCN*WTPNWA
Trigger: AGCCCAATTCGGGGTCCACCAATTACAGAGGCATAC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGTCCTGTGGTACCAGGTaGCACTGCTTCAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLSCGTR*HCFSNC
Trigger: GCAGTTACTGAAGCAGTGCCACCTGGTACCACAGGA...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGTGAGTCCGAGGGCTTaGTTTGGGAGTCCTATCAAG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLVSPRA*FGSPIK
Trigger: CTTGATAGGACTCCCAAACCAAGCCCTCGGACTCAC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATGCCAGTTCCTGGGATaGTGCTTGGTGGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSCQFLG*CLVEYL
Trigger: CAGATACTCCACCAAGCACCATCCCAGGAACTGGCA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp ATGGCAATGTGCAGTTGCACCCGCTGCAGGCTTGTCTaGCAGGAAGAAATGCTGGTTTCCAGCCTGCGCACC +
Preference number: 4 (lower is better)
Translates to: MAMCSCTRCRLV*QEEMLVSSLRT
Trigger: GGTGCGCAGGCTGGAAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATGGGGTTCGCAACTTTaGAAGAACAGTAAACTGCGC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPWGSQL*KNSKLR
Trigger: GCGCAGTTTACTGTTCTTTCAAAGTTGCGAACCCCA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACTGTGTTGCAGAGTATaGGATGGATGGTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSLCCRV*DGWSTP
Trigger: AGGAGTGGACCATCCATCTCATACTCTGCAACACAG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGTAGCAGTAATGAACTaGCACACTGTTGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLVAVMN*HTVGGG
Trigger: GCCACCTCCAACAGTGTGTCAGTTCATTACTGCTAC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGACATGACATCAGGCTaGGTCTTCTGGCCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLDMTSG*VFWPVL
Trigger: TAACACTGGCCAGAAGACTCAGCCTGATGTCATGTC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAGCCCAACTAGCCAATaGTGCCCAAGATTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSSPTSQ*CPRFGY
Trigger: GTAGCCAAATCTTGGGCAGCATTGGCTAGTTGGGCT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACTATCACATCATCAGTaGTCTGCTCTGCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLSHHQ*SALLCD
Trigger: GTCACAGAGCAGAGCAGAGCACTGATGATGTGATAG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATTCATCAGTGCTGTGTaGTTCTCTCGCATGATGGCA +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPFISAV*FSRMMA
Trigger: TGCCATCATGCGAGAGAAGCACACAGCACTGATGAA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGTGATGCTCCGCACATaGTCCAAAGCAAACACGATG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLVMLRT*SKANTM
Trigger: CATCGTGTTTGCTTTGGAGCATGTGCGGAGCATCAC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATACAGAATAGTGGCGTaGATGGAAGCGGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSYRIVA*MEAGCF
Trigger: GAAACACCCCGCTTCCATGCACGCCACTATTCTGTA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATCAACATCTGTGAGCTaGTCCTGCAGGCTTAGGTAT +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPSTSVS*SCRLRY
Trigger: ATACCTAAGCCTGCAGGAGCAGCTCACAGATGTTGA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACTGCAGAGCAACTGTTaGATAGTGATGCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLQSNC*IVMQLF
Trigger: GAACAGCTGCATCACTATGCAACAGTTGCTCTGCAG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACTGCGCACCAGGTCATaGTTCTTCCATGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSLRTRS*FFHAVS
Trigger: TGATACAGCATGGAAGAAGCATGACCTGGTGCGCAG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACAGGCATCAGGAAGCTaGAGACTGTGTAGCAGATTG +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSQASGS*RLCSRL
Trigger: CAATCTGCTACACAGTCTCCAGCTTCCTGATGCCTG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACAGTGCAAATACAGTTaGAGACAGTGCCCACATCCC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSQCKYS*RQCPHP
Trigger: GGGATGTGGGCACTGTCTCCAACTGTATTTGCACTG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAGAAGAGGACAACGCATaGAGACTGCTACATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSEEDNA*RLLHAC
Trigger: GCAAGCATGTAGCAGTCTCCATGCGTTGTCCTCTTC...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAAGGTGTTGTTGTTCTaGACTCTCTTCACCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPKVLLF*TLFTSS
Trigger: GGACGAGGTGAAGAGAGTCCAGAACAACAACACCTT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAACCAGGCTCCATCTCTaGATGTCAGATCAACCAGCT +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSTRLHL*MSDQPA
Trigger: AGCTGGTTGATCTGACATCCAGAGATGGAGCCTGGT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGTTTCTTCTTCATGCTaGTCAGGATTGCAGACCGAG +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPVSSSC*SGLQTE
Trigger: CTCGGTCTGCAATCCTGACCAGCATGAAGAAGAAAC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp AGCTTGCTTTCTTCACCTTTGACCCTGGCCATGGTGTaGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLLSSPLTLAMV*GVSLSAAVLQD
Trigger: ATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGAAGAAAGCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CAA 72 bp GCTTCAAAATCTTGTAGTACTGGTGCCAGGGCAGGATaGGCACCACCTGCCCACTTCAGCCGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: ASKSCSTGARAG*APPAHFSRCSM
Trigger: CATTGAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACCAGTACTACAAGATTTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCAGAGGCCACATGGCTaGGGTCCTCAGCATATGCCT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMQRPHG*GPQHMP
Trigger: AGGCATATGCTGAGGACCTCAGCCATGTGGCCTCTG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATGCACTGAAGACAGGTaGTACAACTGTCCCAAAATG +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPCTEDR*YNCPKM
Trigger: CATTTTGGGACAGTTGTATCACCTGTCTTCAGTGCA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGTTCCACCCACACTGTaGATTGTCACAGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLVPPTL*IVTVSL
Trigger: CAGAGATACTGTGACAATTCACAGTGTGGGTGGAAC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACGGAAACTGAACTGTTaGACTGTGACGCAAATGAAC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPRKLNC*TVTQMN
Trigger: GTTCATTTGCGTCACAGTTCAACAGTTCAGTTTCCG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATGGCCTGGACTAGTGTaGACAAAACCGTCTGAATGT +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSWPGLV*TKPSEC
Trigger: ACATTCAGACGGTTTTGTTCACACTAGTCCAGGCCA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACCTACCTGGATATTGTaGTCCACAGCTTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPPTWIL*STAFLH
Trigger: GTGTAAGAAAGCTGTGGAGCACAATATCCAGGTAGG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACATGCTGGTCAGGATTaGAGACCGAGGCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQHAGQD*RPRRGD
Trigger: GTCACCCCGCCTCGGTCTGCAATCCTGACCAGCATG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGTGCCTCTGTAATTGGTaGACCCCGAATTGGGCTAAA +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLCLCNW*TPNWAK
Trigger: TTTAGCCCAATTCGGGGTCCACCAATTACAGAGGCA...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAATATCCAAGTCCTGTaGTACCAGGTGGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSNIQVL*YQVALL
Trigger: AAGCAGTGCCACCTGGTACCACAGGACTTGGATATT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGATGCTTCCACTGGGTTaGGAATATCCAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLMLPLG*EYPSPV
Trigger: CACAGGACTTGGATATTCCCAACCCAGTGGAAGCAT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCTTCTTCAAGTCCCATaGCTGTGTTTCGCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLLLQVP*LCFASR
Trigger: CCTACTTGCGAAACACAGCCATGGGACTTGAAGAAG...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAACCTGGTTTGCTCTCTaGCTCTCTTTGAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPTWFAL*LSLRTR
Trigger: TCTTGTTCTCAAAGAGAGCCAGAGAGCAAACCAGGT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp TGGTGCAAGATGACCAGAGTTCCTTGGCCAGGAGATTaGGGGGTGTGGCCTCCATTAACTCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: WCKMTRVPWPGD*GVWPPLTPPTL
Trigger: CAGTGTTGGAGGAGTTAATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp CACTCATCAGGAGTGGTGCAAGATGACCAGAGTTCCTaGGCCAGGAGATTTGGGGGTGTGGCCTCCATTAAC +
Preference number: 4 (lower is better)
Translates to: HSSGVVQDDQSS*ARRFGGVASIN
Trigger: GTTAATGGAGGCCACACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCTGATGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACGGGCCAATCCCTCCTTaGCACATCCAGGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNGPIPP*HIQAKA
Trigger: GGCCTTAGCCTGGATGTGTCAAGGAGGGATTGGCCC...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACTCAGGACATACATGTaGTGCTGTAACAAAACTCCC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSLRTYM*CCNKTP
Trigger: GGGAGTTTTGTTACAGCAGCACATGTATGTCCTGAG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGAAAAGTGACCTGGTTTaGTCTCTGGCTCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLKSDLV*SLALFE
Trigger: CTCAAAGAGAGCCAGAGAGCAAACCAGGTCACTTTT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGATGGCTTTCAAGAGATaGTTCACATCTCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLMAFKR*FTSPSC
Trigger: GCAGCTTGGAGATGTGAAGCATCTCTTGAAAGCCAT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAACATACACTTCAGGGTaGTTTAAGCGTGAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPTYTSG*FKREKS
Trigger: GCTTTTCTCACGCTTAAACCACCCTGAAGTGTATGT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp TGGCAGAAAGACAATCTCCGTGTGCAGGCAGTGAGCTaGCTTTCTTCACCTTTGACCCTGGCCATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WQKDNLRVQAVS*LSSPLTLAMVL
Trigger: CAACACCATGGCCAGGGTCAAAGGTGAAGAAAGCAAGCTCACTGCCTGCACACGGAGATTGTCTTTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CAA 72 bp GTCTTCATGCTGCCACTGGAACATGGCAATGTGCAGTaGCACCCGCTGCAGGCTTGTCTTGCAGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: VFMLPLEHGNVQ*HPLQACLAGRN
Trigger: ATTTCTTCCTGCAAGACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCAGTGGCAGCATGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATCAGCATTATCTCTTTaGATGGAATCCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSSALSL*MESSCF
Trigger: GAAGCAGCTGGATTCCATTCAAAGAGATAATGCTGA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAATGTTGTCTTGCCATaGTTTGTATTCAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPNVVLP*FVFSQE
Trigger: TTCCTGGCTGAATACAAATCATGGCAAGACAACATT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATACAGGCGATGCTCTTaGCAGTTCCTGGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQYRRCS*QFLGWC
Trigger: GCACCATCCCAGGAACTGGCAAGAGCATCGCCTGTA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGAGAGTGTTTGGGGCTaGCACTGTTACGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMESVWG*HCYVQH
Trigger: ATGCTGGACGTAACAGTGCCAGCCCCAAACACTCTC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAAGGGCATTGTCAATaGCATCACCATAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLQGHCQ*HHHSYP
Trigger: AGGATAACTATGGTGATGCCATTGACAATGCCCTTG...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAGCTGCTGTCCAGCTTaGGAAGCACAACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSCCPA*EAQPAS
Trigger: AGATGCTGGTTGTGCTTCCCAAGCTGGACAGCAGCT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACAGGTTCTGTTGCTGCTaGGCTCTGTACACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNRFCCC*ALYTCL
Trigger: GAGGCAGGTGTACAGAGCTCAGCAGCAACAGAACCT...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGTTGTCATATCTATaGGGACATTATCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLQLSYL*GHYPDV
Trigger: GACATCTGGATAATGTCCTCATAGATATGACAACTG...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAGCAAACTTGCAAGCTaGGTTGCTTCTAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSSKLAS*VASKLL
Trigger: CAATAACTTAGAAGCAACTCAGCTTGCAAGTTTGCT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTCTGCTGCATACCGCTaGAGGGTCATTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSAAYR*RVISVA
Trigger: TGCTACTGAAATGACCCTTCAGCGGTATGCAGCAGA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAATGAACACATCTGCTaGCACCGTTTGATTAGTTCA +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSNEHIC*HRLISS
Trigger: TGAACTAATCAAACGGTGTCAGCAGATGTGTTCATT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTGCTCCTTCTCTGTTTaGACAGCTCTTTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMCSFSV*TALWVD
Trigger: GTCCACCCAAAGAGCTGTTCAAACAGAGAAGGAGCA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCATTTGCTGCATCGGTaGCTAGGGGTGATGCAAAAC +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMHLLHR*LGVMQN
Trigger: GTTTTGCATCACCCCTAGTCACCGATGCAGCAAATG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAACCTTCATACAGCTaGGCCAAGTTATCTAGATTA +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLQPSYS*AKLSRL
Trigger: TAATCTAGATAACTTGGCTCAGCTGTATGAAGGTTG...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACATCTACAGAAACTTTaGTTTCAGCACCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSHLQKL*FQHQSP
Trigger: AGGACTTTGGTGCTGAAAGCAAAGTTTCTGTAGATG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTCTTGCAGGAAGAAATaGTGGTTTCCAGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMSCRKK*WFPACA
Trigger: TGCGCAGGCTGGAAACCAGCATTTCTTCCTGCAAGA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACATGGCAATGTGCAGTTaGACCCGCTGCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNMAMCS*TRCRLV
Trigger: GACAAGCCTGCAGCGGGTGCAACTGCACATTGCCAT...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTGGAACATGGCAATGTaGAGTTGCACCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNWNMAM*SCTRCR
Trigger: CCTGCAGCGGGTGCAACTGCACATTGCCATGTTCCA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGATGCTGCCCAAGATTTaGCTACTTCAGGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMMLPKI*LLQVPA
Trigger: TGCAGGCACCTGAAGTAGCCAAATCTTGGGCAGCAT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCAGGTGTGGGGAATCTTaGGCCACGCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCRCGES*ATRQRR
Trigger: CCTCCTTTGCCGCGTGGCCCAAGATTCCCCACACCT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGGAGATTTGGGGGTGTaGCCTCCATTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQGDLGV*PPLTPP
Trigger: TGGAGGAGTTAATGGAGGCCACACCCCCAAATCTCC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCGTGCCAGGGCAGGATTaGCACCACCTGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCVPGQD*HHLPTS
Trigger: TGAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCAC...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACTGTCGACTAGGCTCTaGATGGTCTCACAGACAGTC +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQLSTRL*MVSQTV
Trigger: GACTGTCTGTGAGACCATCCAGAGCCTAGTCGACAG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATCACTCTCTGTTATCTaGAGTGTTATATCTTCATCC +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSSLSVI*SVISSS
Trigger: GGATGAAGATATAACACTTCAGATAACAGAGAGTGA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGTTGCTTCTAAGTTATTaGATGCAGCCTGATAATGTG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLLLLSY*MQPDNV
Trigger: CACATTATCAGGCTGCATTCAATAACTTAGAAGCAA...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATCAATTTCTTTCAACTaGTCTTCACAAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSSISFN*SSQTGT
Trigger: TGTGCCAGTTTGTGAAGATCAGTTGAAAGAAATTGA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACCATTCACAGTATTCTaGTCTTCAAGTGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSPFTVF*SSSELD
Trigger: ATCAAGTTCACTTGAAGATCAGAATACTGTGAATGG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTGCTGCAGAGAAAAGTaGCCTGGTTTGCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNCCREK*PGLLSG
Trigger: GCCAGAGAGCAAACCAGGTCACTTTTCTCTGCAGCA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCCAAGCTGCCGGTTGTaGCCGGTGAGCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCPSCRL*PVSTVF
Trigger: AAAGACTGTGCTCACCGGTCACAACCGGCAGCTTGG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGACTCATCAGGAGTGGTaGAAGATGACCAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMTHQEW*KMTRVP
Trigger: AGGAACTCTGGTCATCTTGCACCACTCCTGATGAGT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGCTGTTTATGTCTGCTaGATACCGCTGAAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMAVYVC*IPLKGH
Trigger: ATGACCCTTCAGCGGTATGCAGCAGACATAAACAGC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACGGTACCAGGTGGCACTaGTTCAGTAACTGCACCAAG +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNGTRWH*FSNCTK
Trigger: CTTGGTGCAGTTACTGAAGCAGTGCCACCTGGTACC...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGACTCAACCAGAGTCTaGAGAGGAACTCCATCAGTA +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMDSTRV*RGTPSV
Trigger: TACTGATGGAGTTCCTCTGCAGACTCTGGTTGAGTC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGCTGCAGGCTTGTCTTaGAGGAAGAAATGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMAAGLS*RKKCWF
Trigger: AAACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACACCTTCTCCCTGACTaGCATTGTCAACCACCTTTC +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQHLLPD*HCQPPF
Trigger: GAAAGGTGGTTGACAATGCCAGTCAGGGAGAAGGTG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGATGTATATACTCCATTaGCTAAATGAACAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLMYILH*LNEQPQ
Trigger: CTGAGGCTGTTCATTTAGCCAATGGAGTATATACAT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGAGACTATCTAGTTCATaGAGCATACTTTCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLRLSSS*SILSKV
Trigger: CACCTTAGAAAGTATGCTCCATGAACTAGATAGTCT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp GTTGTTGTTCTGGACTCTCTTCACCTCGTCCTCCAGTaGCTGAATTCGTCTCAGGACATACATGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VVVLDSLHLVLQ*LNSSQDIHVLL
Trigger: CAGCAGCACATGTATGTCCTGAGACGAATTCAGCAACTGGAGGACGAGGTGAAGAGAGTCCAGAACAACAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp TGCAGGCTTAGGTATTCATCTAAGCTGCTGTCCAGCTaGGGAAGCACAACCAGCATCTCATCCCGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: CRLRYSSKLLSS*GSTTSISSRFL
Trigger: TAAGAACCGGGATGAGATGCTGGTTGTGCTTCCCAAGCTGGACAGCAGCTTAGATGAATACCTAAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp CATAGTCAACCTGCTCAGCAACTGACATCCTCCTGTTaGGATCAACATCTCGGCCCTCTAGCTTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: HSQPAQQLTSSC*DQHLGPLAWLS
Trigger: TGAAAGCCAAGCTAGAGGGCCGAGATGTTGATCCAAACAGGAGGATGTCAGTTGCTGAGCAGGTTGACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACGGCTTTCAGATTGAGTaGGGTGCTGCTGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNGFQIE*GAAGVL
Trigger: AAGAACTCCAGCAGCACCTCACTCAATCTGAAAGCC...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTTGCAGGATATAATATaGGGTGTGGGGAATCTTGGG +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMLQDII*GVGNLG
Trigger: CCCAAGATTCCCCACACCTCATATTATATCCTGCAA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTCGTCCTCCAGTTGCTaGATTCGTCTCAGGACATAC +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNSSSSC*IRLRTY
Trigger: GTATGTCCTGAGACGAATTCAGCAACTGGAGGACGA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAACTCCATTGGCTAAATaGACAGCCTCAGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQTPLAK*TASDAS
Trigger: GGAAGCATCTGAGGCTGTTCATTTAGCCAATGGAGT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGGAGCTCACCAGCATaGTTCACTAGCAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCRSSPA*FTSNLS
Trigger: GCTCAGGTTGCTAGTGAAGCATGCTGGTGAGCTCCG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGTTTATCTACAATTTTaGTGTAGCAATCCTGCATCA +
Preference number: 4 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLVYLQF*CSNPAS
Trigger: TGATGCAGGATTGCTACAGCAAAATTGTAGATAAAC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TTCAGCAGCCATTCCCAGTTGGCTGTCCTACTCTCTTGGCACACTGAACGCAATAAAAGTGACCTGGTTTaGTCTCTGGCTCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: FSSHSQLAVLLSWHTERNKSDLV*SLALFE
Trigger: CTCAAAGAGAGCCAGAGAGCAAACCAGGTCACTTTT...ATTGCGTTCAGTGTGCCAAGAGAGTAGGACAGCCAACTGGGAATGGCTGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
CDS-3UTR CCA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAGAGATGGCTTCTAATTaGTACTGTTTGCTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSEMASN*YCLLFN
Trigger: ATTAAAGAGCAAACAGTACCAATTAGAAGCCATCTC...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCTAAGTCCTGGGCAGTaGTTGTCTTTCCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNLSPGQ*LSFPAE
Trigger: TTCAGCTGGGAAAGACAACCACTGCCCAGGACTTAG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACACACACTGTTGGAGGTaGCTGAGGAGCATACTGCAT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNTHCWR*LRSILH
Trigger: ATGCAGTATGCTCCTCAGCCACCTCCAACAGTGTGT...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCGCTCTTGCCAGTTCCTaGGATGGTGCTTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCALASS*DGAWWS
Trigger: ACTCCACCAAGCACCATCCCAGGAACTGGCAAGAGC...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCATCGATCGCTCCTGTaGTTTCCTCATGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNHRSLL*FPHVFG
Trigger: ACCAAAGACATGAGGAAATCACAGGAGCGATCGATG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGTTATATCTTCATCCTaGATTCCTGCTGGCCGACAT +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQVISSS*IPAGRH
Trigger: ATGTCGGCCAGCAGGAATTCAGGATGAAGATATAAC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGGAATACTTATTTCCTaGAGCCTGGGATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQGILIS*SLGFTA
Trigger: AGCAGTGAATCCCAGGCTTCAGGAAATAAGTATTCC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACGTTTTTCAACATCTGTaGGCTGCTCCTGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNVFQHL*AAPAGL
Trigger: TAAGCCTGCAGGAGCAGCTCACAGATGTTGAAAAAC...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCTGCTCTCCAGCACTTaGAGCTGCACCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCLLSST*SCTFHH
Trigger: ATGATGGAAGGTGCAGCTTCAAGTGCTGGAGAGCAG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGTTCATCACCAACTGTaGGAATTTCCCTACCTGGAT +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQVHHQL*EFPYLD
Trigger: ATCCAGGTAGGGAAATTCTCACAGTTGGTGATGAAC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGAAGTCTCAATCTGACTaGGAGCATGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMKSQSD*EHAVSS
Trigger: AGAAGAAACTGCATGCTCTCAGTCAGATTGAGACTT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCCAACTAGCCAATGCTaGCCAAGATTTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNPTSQC*PRFGYF
Trigger: GAAGTAGCCAAATCTTGGGCAGCATTGGCTAGTTGG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAAGGACATACATGTGCTaGTGTAACAAAACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQRTYMC*CNKTPS
Trigger: GCTGGGAGTTTTGTTACAGCAGCACATGTATGTCCT...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACAAGCGGGGTGTTTCCTaGCGGTTAATTGTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNKRGVS*RLIVAN
Trigger: GTTTGCTACAATTAACCGGCAGGAAACACCCCGCTT...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAAGGATTGGCACCACCTaGCCACTTCAGCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLRIGTT*PLQPLL
Trigger: GAGCAGCGGCTGAAGTGGGCAGGTGGTGCCAATCCT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCATTATCTCTTTGAATaGAATCCAGCTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMHYLFE*NPAASR
Trigger: CCTGGAAGCAGCTGGATTCCATTCAAAGAGATAATG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCATGACCAGAGTTCCTTaGCCAGGAGATTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCMTRVP*PGDLGV
Trigger: CACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCAT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTCCGAGGGCTTGGTTTaGGAGTCCTATCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCSEGLV*ESYQEL
Trigger: CAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCTCGGCCCTCTAGCTTaGCTTTCACTCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCLGPLA*LSLSST
Trigger: TGTGGAAGAGAGTGAAAGCCAAGCTAGAGGGCCGAG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATCTTGCCTCAACTCCTaGAGCAACTTACTACTTTCA +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQSCLNS*SNLLLS
Trigger: TGAAAGTAGTAAGTTGCTTCAGGAGTTGAGGCAAGA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTTCAGGTGCCTGCACTaGAGACAGGTGATACAACTG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCFRCLH*RQVIQL
Trigger: CAGTTGTATCACCTGTCTTCAGTGCAGGCACCTGAA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCACTTGGATTGCTTCCTaGACAGCTCTTTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCTWIAS*TALCWV
Trigger: GACCCAGCAAAGAGCTGTTCAGGAAGCAATCCAAGT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCAAGTAGGCTTGAAGTaGCTCAACCAGAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCQVGLK*LNQSLQ
Trigger: CTGCAGACTCTGGTTGAGTCACTTCAAGCCTACTTG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTTCACATTGACAATCTaGACAGGTCCATTCACAGTA +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMFTLTI*TGPFTV
Trigger: TACTGTGAATGGACCTGTTCAGATTGTCAATGTGAA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTGGTGGAGTATCTGCTaGTGTAGCCAGATTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNWWSIC*CSQIFL
Trigger: CAGAAAAATCTGGCTACATCAGCAGATACTCCACCA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTCCCAAATAGCCCACTaGCAAAGGACAGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCSQIAH*QRTASV
Trigger: GACAGATGCTGTCCTTTGGCAGTGGGCTATTTGGGA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACAATCTCTTTCCATTCTaGCTGGACCCATTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNNLFPF*LDPFSQ
Trigger: CTGGCTAAATGGGTCCAGGCAGAATGGAAAGAGATT...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCACTGCTTCAGTAACTaGACCAAGCAGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNHCFSN*TKQVTF
Trigger: AAATGTCACCTGCTTGGTGCAGTTACTGAAGCAGTG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCAGGAGGTCTTCATGCTaGCACTGGAACATGGCAATG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCRRSSC*HWNMAM
Trigger: CATTGCCATGTTCCAGTGGCAGCATGAAGACCTCCT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGACTTAAATGGAGCCTaGGATCATCCTCATCTAACA +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQDLNGA*DHPHLT
Trigger: TGTTAGATGAGGATGATCCCAGGCTCCATTTAAGTC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATCCTGCATCATGGCCTaGTCTTCATTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQSCIMA*SSFKPL
Trigger: AAGTGGTTTAAATGAAGACCAGGCCATGATGCAGGA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGATAGGCTTGGCCATTTaGTCTTCACTAAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMIGLAI*SSLKQE
Trigger: TTCTTGCTTTAGTGAAGACCAAATGGCCAAGCCTAT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACGAACAGCTCTTTGGGTaGACATATCCTGGGTCAATT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNEQLFG*TYPGSI
Trigger: AATTGACCCAGGATATGTCCACCCAAAGAGCTGTTC...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp TGTTGCTGGTACATAGCTTGGGGGACCAAGGTCCATTaGTGTGCTTATCTCTTGAAGCAAACTTGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: CCWYIAWGTKVH*CAYLLKQTCKL
Trigger: CAGCTTGCAAGTTTGCTTCAAGAGATAAGCACACAAATGGACCTTGGTCCCCCAAGCTATGTACCAGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp TCTGAAATATGGCTTTTGGATACTGCAGAGCAACTGTaGCATAGTGATGCAGCTGTTCCAGACAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: SEIWLLDTAEQL*HSDAAVPDSHG
Trigger: TCCGTGGCTGTCTGGAACAGCTGCATCACTATGCAACAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp GGCACTGATAAAGCTACACAATGTGAGTCCGAGGGCTaGGTTTGGGAGTCCTATCAAGAGCTGTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: GTDKATQCESEG*VWESYQELSYK
Trigger: TTTGTAAGACAGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGACTCACATTGTGTAGCTTTATCAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAAGGAGTGGTGCAAGATaGCCAGAGTTCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLRSGAR*PEFLGQ
Trigger: CTGGCCAAGGAACTCTGGTCATCTTGCACCACTCCT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTGCTGGGTCTGTAGTTaGGTATGCTCAGAATACCTG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCCWVCS*VCSEYL
Trigger: CAGGTATTCTGAGCATACTCAACTACAGACCCAGCA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTCTGCTGACACCGTTTaGTTAGTTCAAATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNSADTV*LVQIRQ
Trigger: CTGCCTTATTTGAACTAATCAAACGGTGTCAGCAGA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAACGTGTCCTGAGCTCTaGCCAATGGGGTTCGCAACT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLTCPEL*PMGFAT
Trigger: AGTTGCGAACCCCATTGGGCAGAGCTCAGGACACGT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACTTCAGGTCATGGACTaGGTTCTGCCACTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLLQVMD*VLPLLH
Trigger: GTGCAGGAGTGGCAGAACGCAGTCCATGACCTGAAG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCTCTCAATCCGAGGGTaGTCCTCTCCAACTGTATTA +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCLSIRG*SSPTVL
Trigger: TAATACAGTTGGAGAGGAGCACCCTCGGATTGAGAG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTTCTGCGCTCTCTGTTaGAAACTCAGCATTATCTCT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNFCALC*KLSIIS
Trigger: AGAGATAATGCTGAGTTTGCAACAGAGAGCGCAGAA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGACTTCTCCAGGAAGTaGAATTTCAGTGTTAGTCAT +
Preference number: 4 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQDFSRK*NFSVSH
Trigger: ATGACTAACACTGAAATTGCACTTCCTGGAGAAGTC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGATTCTCTCATCCAGATaGAAATCTTCTAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMILSSR*KSSSPL
Trigger: CAAAGGACTAGAAGATTTGCATCTGGATGAGAGAAT...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCGGTATTCATCTAAGCTaGTGTCCAGCTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCGIHLS*CPAWEA
Trigger: TGCTTCCCAAGCTGGACAGCAGCTTAGATGAATACC...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTCTGTGAGCTGCTCCTaGAGGCTTAGGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCSVSCS*RLRYSS
Trigger: AGATGAATACCTAAGCCTGCAGGAGCAGCTCACAGA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATGCTGGTTTCCAGCCTaGGCACCAGGTCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLCWFPA*APGHAS
Trigger: AGAAGCATGACCTGGTGCGCAGGCTGGAAACCAGCA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCATGCACTATCAGTTCTaGGTTGCCAGTCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCMHYQF*VASHSS
Trigger: GCTGGAATGACTGGCAACCCAGAACTGATAGTGCAT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCGTAAAGACCAAACAATaGTGTGGCTCCATCCACCCA +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCVKTKQ*CGSIHP
Trigger: TGGGTGGATGGAGCCACACCATTGTTTGGTCTTTAC...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCGACGAGGTACAATGCTaGGATTCTGAGGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCDEVQC*DSEEFG
Trigger: ACCAAACTCCTCAGAATCCCAGCATTGTACCTCGTC...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACCTCGCCGCATGATGTaGAGAACCTGCTCACAGGAA +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLPRRMM*RTCSQE
Trigger: TTCCTGTGAGCAGGTTCTCCACATCATGCGGCGAGG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTGGGTGGACATATCCTaGGTCAATTGTTTATGTGCT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNWVDIS*VNCLCA
Trigger: AGCACATAAACAATTGACCCAGGATATGTCCACCCA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp AGGAGCATACTGCATTTCATACTTCCTATAGAGTTCTaGACAGCGCTCTACTGTGGTGTTGCAGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: RSILHFILPIEF*TALYCGVADEL
Trigger: GAGCTCATCTGCAACACCACAGTAGAGCGCTGTCAAGAACTCTATAGGAAGTATGAAATGCAGTATGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACTCTGCTCTGCTCTGTaGCTTAAATGGAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLLCSAL*LKWSLG
Trigger: TCCCAGGCTCCATTTAAGTCACAGAGCAGAGCAGAG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACACAGTATCTCTGGCTaGGACTTCTCCAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLHSISG*DFSRKC
Trigger: GCACTTCCTGGAGAAGTCTCAGCCAGAGATACTGTG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCACAAACTGGCACAGTaGCAGCTTCTTGTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCHKLAQ*QLLVSN
Trigger: GTTTGAAACAAGAAGCTGTCACTGTGCCAGTTTGTG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp CTTATTAGCTCACCTTTTCAGCAGCCATTCCCAGTTGGCTGTCCTACTCTCTTGAATGAACACATCTGCTaGCACCGTTTGATTAGTTCA +
Preference number: 4 (lower is better)
Translates to: LISSPFQQPFPVGCPTLLNEHIC*HRLISS
Trigger: TGAACTAATCAAACGGTGTCAGCAGATGTGTTCATT...CAAGAGAGTAGGACAGCCAACTGGGAATGGCTGCTGAAAAGGTGAGCTAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
CDS-3UTR TCA 90 bp CTACTCTCTTGGCACACTGAACGCAATACTATACACATTTTGCCCCTTCAGAACCGGAAACTGAACTGTTaGACTGTGACGCAAATGAAC +
Preference number: 4 (lower is better)
Translates to: LLSWHTERNTIHILPLQNRKLNC*TVTQMN
Trigger: GTTCATTTGCGTCACAGTTCAACAGTTCAGTTTCCG...GTTCTGAAGGGGCAAAATGTGTATAGTATTGCGTTCAGTGTGCCAAGAGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
CDS-3UTR TCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCTTTCAAGGTGGGAGTaGTTTCCTGCAGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCLSRWE*FPAAFQ
Trigger: TTGAAATGCTGCAGGAAATCACTCCCACCTTGAAAG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAAATGGCTCCAAACTCTaGAACCACCCAGACACCTGC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLNGSKL*NHPDTC
Trigger: GCAGGTGTCTGGGTGGTTGCAGAGTTTGGAGCCATT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCAGCTTGATATTAACTaGCGCCAGATAACATCGACC +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCQLDIN*RQITST
Trigger: GGTCGATGTTATCTGGCGGCAGTTAATATCAAGCTG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCAGCACCAAAGTCCTTTaGCTCTACCTGAGCAATGAT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCSTKVL*LYLSND
Trigger: ATCATTGCTCAGGTAGAGGCAAAGGACTTTGGTGCT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACAGTTCCTGGGATGGTaGTTGGTGGAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLQFLGW*LVEYLL
Trigger: CAGCAGATACTCCACCAAGCACCATCCCAGGAACTG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCTTCCACACACTCACTaGATAGGAGTTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCLPHTH*IGVSLL
Trigger: CAAGAGAGAAACTCCTATGCAGTGAGTGTGTGGAAG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCTTCAACAAGAGTGTTaGCTAAAAGGCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNLQQEC*LKGLWK
Trigger: TTTCCAAAGGCCTTTTAGCCAACACTCTTGTTGAAG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCAGGTTACAAATACTCTaGCGCACATACACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCRLQIL*RTYTSG
Trigger: CCCTGAAGTGTATGTGCGCCAGAGTATTTGTAACCT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTTATTTCCTGAAGCCTaGGATTCACTGCTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNLFPEA*DSLLSD
Trigger: ATCACTTAGCAGTGAATCCCAGGCTTCAGGAAATAA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATGCAGGAAGAAATGCTaGTTTCCAGCCTGCGCACCA +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLCRKKC*FPACAP
Trigger: TGGTGCGCAGGCTGGAAACCAGCATTTCTTCCTGCA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp TTCCCATCTGATCCAAGAAAGAGGAGTTTCTTGGGCTaGGTTTTAGTTGGTAAGATGGTGATAGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: FPSDPRKRSFLG*VLVGKMVIVPP
Trigger: GGGTGGAACTATCACCATCTTACCAACTAAAACCAAGCCCAAGAAACTCCTCTTTCTTGGATCAGATGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp ATGTGTTATCCACTGTTCAAACTCATTCAGCTTCACTaGGATTGCTTCCTGAACAGCTCTTTGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: MCYPLFKLIQLH*DCFLNSSLLGL
Trigger: CAGACCCAGCAAAGAGCTGTTCAGGAAGCAATCCAAGTGAAGCTGAATGAGTTTGAACAGTGGATAACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATGTCAACCACCTTTCTaGCCCACCTATAAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLCQPPF*PTYKPN
Trigger: GTTGGGCTTATAGGTGGGGCAGAAAGGTGGTTGACA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATCGCAAGATGTAGCTTaGTCGTTTCTGCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLSQDVA*SFLRSL
Trigger: CAGAGAGCGCAGAAACGAGCAAGCTACATCTTGCGA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAGTCAGATCAACCAGCTaGTCTCCAGCACTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLVRSTS*SPALEA
Trigger: AGCTTCAAGTGCTGGAGAGCAGCTGGTTGATCTGAC...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCAAACATGCCATCAAATaGTACCAAAAGCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCKHAIK*YQKHLA
Trigger: GGCCAGATGCTTTTGGTAGCATTTGATGGCATGTTT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAAATAATGCCTCTCCATaGAGCAGTCGGGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLNNASP*SSRGCL
Trigger: GAGACAACCCCGACTGCTCCATGGAGAGGCATTATT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp GCAGTGAGTACTGAAAATGCTAAGCTGAAGGATGCCTaGATCGTGACTCACTACACACTAGTCACTAAACAA +
Preference number: 4 (lower is better)
Translates to: AVSTENAKLKDA*IVTHYTLVTKQ
Trigger: TTGTTTAGTGACTAGTGTGTAGTGAGTCACGATCAAGGCATCCTTCAGCTTAGCATTTTCAGTACTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032891.15
ENSMUST00000179331.9
3UTR CAA 72 bp TTCTACTCCAGTTACACCCAGTGCTGTTTCAATGTTTaGTGTCATTCGAAAAGGCACTTTCTCGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: FYSSYTQCCFNV*CHSKRHFLGNS
Trigger: AGAGTTCCCGAGAAAGTGCCTTTTCGAATGACACAAAACATTGAAACAGCACTGGGTGTAACTGGAGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp ATCAAGAGCTGTCTTACAAAGTCAGCTGTAAAGGCCTaGATAGGCTTGGCCATTTGGTCTTCACTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: IKSCLTKSAVKA*IGLAIWSSLKQ
Trigger: TTGCTTTAGTGAAGACCAAATGGCCAAGCCTATCAAGGCCTTTACAGCTGACTTTGTAAGACAGCTCTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAACTGCACCAAGCAGGTaGCATTTCCACTCATACTAC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLTAPSR*HFHSYY
Trigger: GTAGTATGAGTGGAAATGTCACCTGCTTGGTGCAGT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TTGAACAGTCAAGTTCCATGGATCCTAAAAGCAAGATTTAATCATCACTGCATTTGCTGCAGAGAAAAGTaGCCTGGTTTGCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LNSQVPWILKARFNHHCICCREK*PGLLSG
Trigger: GCCAGAGAGCAAACCAGGTCACTTTTCTCTGCAGCA...AATGCAGTGATGATTAAATCTTGCTTTTAGGATCCATGGAACTTGACTGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAGTCATGCTTCTTCCATaGTGTATCATAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLVMLLP*CIIGAG
Trigger: GCCAGCTCCTATGATACAGCATGGAAGAAGCATGAC...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAACCACTCATCAGGAGTaGTGCAAGATGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLTTHQE*CKMTRV
Trigger: AACTCTGGTCATCTTGCACCACTCCTGATGAGTGGT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATTGCAGAGTATGAGATaGATGGTCCACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLLQSMR*MVHSFS
Trigger: GCTGAAGGAGTGGACCATCCATCTCATACTCTGCAA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCACATCTAAGTGCTTCTaGGAATATGATTTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCTSKCF*EYDLPE
Trigger: TTCCGGCAAATCATATTCCCAGAAGCACTTAGATGT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp TATCCAGAGTGCAGTGATCAACAAGCTTTGAAGTCCTaGGCTGCTCTTATCTGCACTATTCTTTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YPECSDQQALKS*AALICTILFSK
Trigger: CTTTGAGAAAAGAATAGTGCAGATAAGAGCAGCCAAGGACTTCAAAGCTTGTTGATCACTGCACTCTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp ATCTTCATCCTGAATTCCTGCTGGCCGACATACAGCTaGTCCAAGAATACCATATATTCTCTCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: IFILNSCWPTYS*SKNTIYSLFLF
Trigger: GAAGAGAAAGAGAGAATATATGGTATTCTTGGACAAGCTGTATGTCGGCCAGCAGGAATTCAGGATGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
3UTR CAA 72 bp TTCATCACCAACTGTGAGAATTTCCCTACCTGGATATaGTGCTCCACAGCTTTCTTACACAGATCATCTACA +
Preference number: 4 (lower is better)
Translates to: FITNCENFPTWI*CSTAFLHRSST
Trigger: TGTAGATGATCTGTGTAAGAAAGCTGTGGAGCACAATATCCAGGTAGGGAAATTCTCACAGTTGGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAACATCAGAAAAGTCCTaGGGGTGGAACGTGTTACTT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLTSEKS*GWNVLL
Trigger: AAGTAACACGTTCCACCCTCAGGACTTTTCTGATGT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATCTTTATTGCTATCCTaGGAAGCAGGAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLSLLLS*EAGGLP
Trigger: AGGAAGTCCTCCTGCTTCTCAGGATAGCAATAAAGA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCAATTTTCTCTTCTTTaGGCAAGGTGTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCQFSLL*ARCCCS
Trigger: AGAACAACAACACCTTGCGCAAAGAAGAGAAAATTG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCAAAGCAGTTTCAACTTaGGCAAACATGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCKAVST*ANMPSN
Trigger: ATTTGATGGCATGTTTGCCCAAGTTGAAACTGCTTT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAGAGAATTTCCCTACCTaGATATTGTGCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLENFPT*ILCSTA
Trigger: AGCTGTGGAGCACAATATCCAGGTAGGGAAATTCTC...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR TCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAATAGCTCTTCCCATCTaGTCCAAGAAAGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLIALPI*SKKEEF
Trigger: AAACTCCTCTTTCTTGGATCAGATGGGAAGAGCTAT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAGTGGGAGTGATTTCCTaGAGCATTTCAACATGTTCT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLVGVIS*SISTCS
Trigger: AGAACATGTTGAAATGCTGCAGGAAATCACTCCCAC...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
3UTR CAA 72 bp AGCTTAAGGAAAGTAAAATATGCACTGCAAGACAATTaGTACAGGCTGAAGATTCTGTCCACAACTTTCCGC +
Preference number: 4 (lower is better)
Translates to: SLRKVKYALQDN*YRLKILSTTFR
Trigger: GCGGAAAGTTGTGGACAGAATCTTCAGCCTGTACAAATTGTCTTGCAGTGCATATTTTACTTTCCTTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179331.9
CDS-3UTR GCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACAACTTGGGCAAACATaGCATCAAATGCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLQLGQT*HQMLPK
Trigger: TTTTGGTAGCATTTGATGGCATGTTTGCCCAAGTTG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACCTAACTCCATGAGATaGCTTCTAATTGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLPNSMR*LLIGTV
Trigger: AACAGTACCAATTAGAAGCCATCTCATGGAGTTAGG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAAAACCATCGTTGGGTTaGCAGAGGAAAGTTTATCTA +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLKPSLG*QRKVYL
Trigger: TAGATAAACTTTCCTCTGCCAACCCAACGATGGTTT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CCA 90 bp TTGAACAGTCAAGTTCCATGGATCCTAAAAGCAAGATTTAATCATCACTGCATTACCTGGTTTGCTCTCTaGCTCTCTTTGAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: LNSQVPWILKARFNHHCITWFAL*LSLRTR
Trigger: TCTTGTTCTCAAAGAGAGCCAGAGAGCAAACCAGGT...AATGCAGTGATGATTAAATCTTGCTTTTAGGATCCATGGAACTTGACTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
CDS-3UTR TCA 90 bp TTGAACAGTCAAGTTCCATGGATCCTAAAAGCAAGATTTAATCATCACTGCATTTCTGCTGACACCGTTTaGTTAGTTCAAATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LNSQVPWILKARFNHHCISADTV*LVQIRQ
Trigger: CTGCCTTATTTGAACTAATCAAACGGTGTCAGCAGA...AATGCAGTGATGATTAAATCTTGCTTTTAGGATCCATGGAACTTGACTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178025.2
CDS-3UTR CCA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAATAGCACAGTTTTTCTaGATTCACCATTTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLIAQFF*IHHLES
Trigger: ACTCTCTAAATGGTGAATCCAGAAAAACTGTGCTAT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCAGCTCCGCGGGTACTaGGTGCCGCCGCCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMQLRGY*VPPPPL
Trigger: CAGCGGCGGCGGCGGCACCAAGTACCCGCGGAGCTG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATCTCGCTTACTCTGCTaGCTCTCAGCCTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPSRLLC*LSACWP
Trigger: TGGCCAGCAGGCTGAGAGCAAGCAGAGTAAGCGAGA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAATGGAGCAGTCGGGGTaGTCTCCAAGCCATGTTCCA +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPMEQSG*SPSHVP
Trigger: TGGAACATGGCTTGGAGACAACCCCGACTGCTCCAT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGCTGCTTCCAGGCTaGGCAGGATTTGATGGCGTC +
Preference number: 5 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLQLLPG*AGFDGV
Trigger: GACGCCATCAAATCCTGCCAAGCCTGGAAGCAGCTG...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAAGCTGCTGTCCAGCTaGGGAAGCACAACCAGCATC +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPKLLSS*GSTTSI
Trigger: GATGCTGGTTGTGCTTCCCAAGCTGGACAGCAGCTT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGCTGCTCTCCAGCACTaGAAGCTGCACCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPAALQH*KLHLPS
Trigger: TGATGGAAGGTGCAGCTTCAAGTGCTGGAGAGCAGC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGAGTCCTGGGCAGTGGTaGTCTTTCCCAGCTGAACCT +
Preference number: 5 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLSPGQW*SFPAEP
Trigger: AGGTTCAGCTGGGAAAGACAACCACTGCCCAGGACT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCACGCTCTACTGTGGTGTaGCAGATGAGCTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPRSTVV*QMSSSI
Trigger: GATGGAAGAGCTCATCTGCAACACCACAGTAGAGCG...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGGTGCCAGGGCAGGATaGGCACCACCTGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMGARAG*APPAHF
Trigger: GAAGTGGGCAGGTGGTGCCAATCCTGCCCTGGCACC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAAATCGGCTTTCAGATaGAGTGAGGTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPKSAFR*SEVLLE
Trigger: CTCCAGCAGCACCTCACTCAATCTGAAAGCCGATTT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGAGGTGTGGGGAATCTaGGGCCACGCGGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMEVWGI*GHAAKE
Trigger: CTCCTTTGCCGCGTGGCCCAAGATTCCCCACACCTC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATTGCGCAAGGTGTTGTaGTTCTGGACTCTCTTCACC +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPLRKVL*FWTLFT
Trigger: GGTGAAGAGAGTCCAGAACAACAACACCTTGCGCAA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGGCAGCTTCCCGTTGTaGCCATCGTTTGTAAAGACC +
Preference number: 5 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLGSFPL*PSFVKT
Trigger: GGTCTTTACAAACGATGGCAACAACGGGAAGCTGCC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAGATGCTTCCACTGGGTaGGGAATATCCAAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPDASTG*GISKSC
Trigger: ACAGGACTTGGATATTCCCAACCCAGTGGAAGCATC...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATGTGAGTCCGAGGGCTaGGTTTGGGAGTCCTATCAA +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSCESEG*VWESYQ
Trigger: TTGATAGGACTCCCAAACCAAGCCCTCGGACTCACA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACTGACATCCTCCTGTTaGGATCAACATCTCGGCCCT +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSLTSSC*DQHLGP
Trigger: AGGGCCGAGATGTTGATCCAAACAGGAGGATGTCAG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATGTGGTTTAAAGCAGTaGCCAGGAAAACCGAGCTTC +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPCGLKQ*PGKPSF
Trigger: GAAGCTCGGTTTTCCTGGCAACTGCTTTAAACCACA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCATCTTTGCGCAAGGTGTaGTTGTTCTGGACTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPSLRKV*LFWTLF
Trigger: GAAGAGAGTCCAGAACAACAACACCTTGCGCAAAGA...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAACTGCAGAGCAACTGTaGCATAGTGATGCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPTAEQL*HSDAAV
Trigger: AACAGCTGCATCACTATGCAACAGTTGCTCTGCAGT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCACTGCTCCTTCTCTGTTaGAACAGCTCTTTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSLLLLC*NSSLGG
Trigger: TCCACCCAAAGAGCTGTTCAAACAGAGAAGGAGCAG...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGGGGACCAAGGTCCATTaGTGTGCTTATCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLGTKVH*CAYLLK
Trigger: CTTCAAGAGATAAGCACACAAATGGACCTTGGTCCC...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAAGGCCTTGATAGGCTaGGCCATTTGGTCTTCACTA +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSKALIG*AIWSSL
Trigger: TAGTGAAGACCAAATGGCCAAGCCTATCAAGGCCTT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCACCTTTGACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGAGGATGGCTGGTAAGTaGCAGATGATGTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: SPLTLAMVLGVSLSAAVLRMAGK*QMMLDL
Trigger: CAAGTCCAACATCATCTGCAACTTACCAGCCATCCT...CAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGTCAAAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAATAGGAGTTTCTCTCTaGCACAGCTTTCCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPIGVSL*HSFPSL
Trigger: AAGACTGGGAAAGCTGTGCAAGAGAGAAACTCCTAT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGGTCCGAGGGCTTGGTTaGGGAGTCCTATCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMVRGLG*GVLSRA
Trigger: AGCTCTTGATAGGACTCCCAAACCAAGCCCTCGGAC...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACATGGCAATGTGCAGTaGCACCCGCTGCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQHGNVQ*HPLQAC
Trigger: ACAAGCCTGCAGCGGGTGCAACTGCACATTGCCATG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAAAGTCCTAATGACCTaGGGAGGTGATGTTAATGCA +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSKVLMT*GGDVNA
Trigger: TGCATTAACATCACCTCCCAAGGTCATTAGGACTTT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATGGCCGACATACAGCTaGTCCAAGAATACCATATAT +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSWPTYS*SKNTIY
Trigger: ATATATGGTATTCTTGGACAAGCTGTATGTCGGCCA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAAGGAGTTTCTTGGGCTaGGTTTTAGTTGGTAAGATG +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSRSFLG*VLVGKM
Trigger: CATCTTACCAACTAAAACCAAGCCCAAGAAACTCCT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCAATTTCTTCCAGCAGTTaGCCCTGCAGTTTTTCAACA +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSISSSS*PCSFST
Trigger: TGTTGAAAAACTGCAGGGCAAACTGCTGGAAGAAAT...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp GTGGGTCAACGGGGAGCTGGGGAACAGGTAAGCGATGGGAAGGAGTGGGATCCAAAAAGCAGTTTCAACTaGGGCAAACATGCCATCAAA +
Preference number: 5 (lower is better)
Translates to: VGQRGAGEQVSDGKEWDPKSSFN*GKHAIK
Trigger: TTTGATGGCATGTTTGCCCAAGTTGAAACTGCTTTT...TGGATCCCACTCCTTCCCATCGCTTACCTGTTCCCCAGCTCCCCGTTGACCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGCCAGAAAGGTTCTGTaGCTGCTGAGCTCTGTACAC +
Preference number: 5 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQARKVL*LLSSVH
Trigger: GTGTACAGAGCTCAGCAGCAACAGAACCTTTCTGGC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp ACCCTGGCCATGGTGTTGGGCGTATCCCTGAGTGCAGCTGTCCTGCAGGATTCATGCTGTTTCAATGTTTaGTGTCATTCGAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: TLAMVLGVSLSAAVLQDSCCFNV*CHSKRH
Trigger: GTGCCTTTTCGAATGACACAAAACATTGAAACAGCA...TGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACGCCGCTGCTCAATGCTaGCTTCAAGGGCTGCTAGTT +
Preference number: 5 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNAAAQC*LQGLLV
Trigger: AACTAGCAGCCCTTGAAGCAAGCATTGAGCAGCGGC...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAATTCCTGGGATGGTGCTaGGTGGAGTATCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQFLGWC*VEYLLM
Trigger: CATCAGCAGATACTCCACCAAGCACCATCCCAGGAA...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTCTCGGCCCTCTAGCTaGGCTTTCACTCTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNSRPSS*AFTLFH
Trigger: GTGGAAGAGAGTGAAAGCCAAGCTAGAGGGCCGAGA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCTGTTACGTCCAGCATaGGCCAACGTGAGAACAGAC +
Preference number: 5 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNLLRPA*ANVRTD
Trigger: GTCTGTTCTCACGTTGGCCAATGCTGGACGTAACAG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACAATGCTGCCCAAGATTaGGCTACTTCAGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNNAAQD*ATSGAC
Trigger: GCAGGCACCTGAAGTAGCCAAATCTTGGGCAGCATT...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCACTGTGCCAGCAGTCTaGTCGCCAGTGACACATTCC +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCTVPAV*SPVTHS
Trigger: GGAATGTGTCACTGGCGACAAGACTGCTGGCACAGT...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCACCTCGTCCTCCAGTaGCTGAATTCGTCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCHLVLQ*LNSSQD
Trigger: GTCCTGAGACGAATTCAGCAACTGGAGGACGAGGTG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCGATGACCAGAGTTCCTaGGCCAGGAGATTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCDDQSS*ARRFGG
Trigger: ACCCCCAAATCTCCTGGCCAAGGAACTCTGGTCATC...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGCTCAGAATACCTGTGTaGCAGAGTATGAGATGGATG +
Preference number: 5 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMLRIPV*QSMRWM
Trigger: CATCCATCTCATACTCTGCAACACAGGTATTCTGAG...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACTCATTCAGCTTCACTaGGATTGCTTCCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQLIQLH*DCFLNS
Trigger: GCTGTTCAGGAAGCAATCCAAGTGAAGCTGAATGAG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTTGTCTTGCCATGATTaGTATTCAGCCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMLSCHD*YSARNC
Trigger: GCAGTTCCTGGCTGAATACAAATCATGGCAAGACAA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACCTTCCTATAGAGTTCTaGACAGCGCTCTACTGTGGT +
Preference number: 5 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNLPIEF*TALYCG
Trigger: ACCACAGTAGAGCGCTGTCAAGAACTCTATAGGAAG...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGCTGCAGGCTTGTCTaGCAGGAAGAAATGCTGGTT +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCRCRLV*QEEMLV
Trigger: AACCAGCATTTCTTCCTGCAAGACAAGCCTGCAGCG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAAGCAATTTTCTCTTCTTaGCGCAAGGTGTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQAIFSS*RKVLLF
Trigger: GAACAACAACACCTTGCGCAAAGAAGAGAAAATTGC...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCACCCACACTGTGAATaGTCACAGTATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCHPHCE*SQYLWL
Trigger: CAGCCAGAGATACTGTGACAATTCACAGTGTGGGTG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACGATAGGCTTGGCCATTaGGTCTTCACTAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNDRLGH*VFTKAR
Trigger: TCTTGCTTTAGTGAAGACCAAATGGCCAAGCCTATC...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTCAGCTGTAAAGGCCTaGATAGGCTTGGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCSAVKA*IGLAIW
Trigger: CCAAATGGCCAAGCCTATCAAGGCCTTTACAGCTGA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCGAGCAACTCTGAAATATGGCTTTaGGATACTGCAGAGCAACTG +
Preference number: 5 (lower is better)
Translates to: HSLLVLNWSTQPVLLPSNSEIWL*DTAEQL
Trigger: CAGTTGCTCTGCAGTATCCAAAAGCCATATTTCAGA...GTTGCTCGGCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TTTCCTAGGTTTCCTCAGAGTAAGCCCCCAGATGCATCACCACCGACTGTGATGTTTCAAACGTTCCACTaGTCTAATAAGTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: FPRFPQSKPPDASPPTVMFQTFH*SNKSAV
Trigger: AACAGCAGACTTATTAGACAAGTGGAACGTTTGAAA...CATCACAGTCGGTGGTGATGCATCTGGGGGCTTACTCTGAGGAAACCTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp CGGGGTTTGTTTTCCTGGATTGTACACACAGGGTCAGGTGGAATGGAGTTCCAACAGATGATGTTGGACTaGAACATTCATTTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RGLFSWIVHTGSGGMEFQQMMLD*NIHLLH
Trigger: ATGCAGCAAATGAATGTTCAAGTCCAACATCATCTG...TTGGAACTCCATTCCACCTGACCCTGTGTGTACAATCCAGGAAAACAAACCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCCATTTTTCATCCACTaGGCCTTGAGTGGACAGTTT +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCPFFIH*ALSGQF
Trigger: AAACTGTCCACTCAAGGCCAAGTGGATGAAAAATGG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCGCACTGCAAGACAATTaGTACAGGCTGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCALQDN*YRLKIL
Trigger: CAGAATCTTCAGCCTGTACAAATTGTCTTGCAGTGC...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCCACAGTGACAGCTTCTaGTTTCAAACGTTCCACTTG +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCHSDSF*FQTFHL
Trigger: CAAGTGGAACGTTTGAAACAAGAAGCTGTCACTGTG...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTCTCTTGAAGCAAACTaGCAAGCTGAGTTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCSLEAN*QAELLL
Trigger: TAGAAGCAACTCAGCTTGCAAGTTTGCTTCAAGAGA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTTGTGTGCTTATCTCTaGAAGCAAACTTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCLCAYL*KQTCKL
Trigger: CAGCTTGCAAGTTTGCTTCAAGAGATAAGCACACAA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATCTGTAGAAAGGCTGTaGCTGGTACATAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLSVERL*LVHSLG
Trigger: CCCCAAGCTATGTACCAGCAACAGCCTTTCTACAGA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TCATACAGCATAGCCTTTTGGTACTTAACTGGTCAACCCAACCAGTACTGTTGCTATTTCCAAGTAAAGTaGGGATTGCAGAGGAATACT +
Preference number: 5 (lower is better)
Translates to: SYSIAFWYLTGQPNQYCCYFQVK*GLQRNT
Trigger: AGTATTCCTCTGCAATCCCAACTTTACTTGGAAATA...GCAACAGTACTGGTTGGGTTGACCAGTTAAGTACCAAAAGGCTATGCTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATCAGCTTCACTTGGATaGCTTCCTGAACAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLSASLG*LPEQLF
Trigger: AAAGAGCTGTTCAGGAAGCAATCCAAGTGAAGCTGA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATTTCCATTGCATGTGTaGACTGGCCTGCTGTATATA +
Preference number: 5 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLFPLHV*TGLLYI
Trigger: TATATACAGCAGGCCAGTCAACACATGCAATGGAAA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTACTCAGCATTATCTCTTaGAATGGAATCCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLLSIIS*NGIQLL
Trigger: AAGCAGCTGGATTCCATTCAAAGAGATAATGCTGAG...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTATCATCTACAGAAACTTaGCTTTCAGCACCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLSSTET*LSAPKS
Trigger: GGACTTTGGTGCTGAAAGCAAAGTTTCTGTAGATGA...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15
CDS-3UTR CAA 90 bp TGCTTTTCTCTTCGTTTCAGAAGTCAGTTCTTCCGATGTAGTGTGTGTCTATTAAAGTTGCAGATGATGTaGGACTTGAACATTCATTTG +
Preference number: 5 (lower is better)
Translates to: CFSLRFRSQFFRCSVCLLKLQMM*DLNIHL
Trigger: CAAATGAATGTTCAAGTCCAACATCATCTGCAACTT...TAATAGACACACACTACATCGGAAGAACTGACTTCTGAAACGAAGAGAAAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032891.15