RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMCR8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049323

Ensembl transcript IDs: ENSMUST00000056907.7, ENSMUST00000102667.5

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGTAAGGGGCCTTGTTAGAGGTAGATGGAGGCGGCGGCTGTCCTaGTTCCCACCGCATCGTCACAGCGCCCAGGCTGATTGTGCCACT +
Preference number: 1 (lower is better)
Translates to: QVRGLVRGRWRRRLS*FPPHRHSAQADCAT
Trigger: AGTGGCACAATCAGCCTGGGCGCTGTGACGATGCGGTGGGAAGCAGGACAGCCGCCGCCTCCATCTACCTCTAACAAGGCCCCTTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp TATCAGGCTCCAGGATGCCAAGTAAGGGGCCTTGTTAGAGGTAGATaGAGGCGGCGGCTGTCCTGCTTCCCACCGCATCGTCACAGCGCC +
Preference number: 1 (lower is better)
Translates to: YQAPGCQVRGLVRGR*RRRLSCFPPHRHSA
Trigger: GGCGCTGTGACGATGCGGTGGGAAGCAGGACAGCCGCCGCCTCCATCTACCTCTAACAAGGCCCCTTACTTGGCATCCTGGAGCCTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp TGCTTGTGGTCTGCAACCCTCGCAGCCCAGATGTGTCTCTGCAGCTaGCCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: CLWSATLAAQMCLCS*PEHCSSVALFRSLL
Trigger: GAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGACACATCTGGGCTGCGAGGGTTGCAGACCACAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 90 bp TGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTATCAGGCTCCAGGATaGCAAGTAAGGGGCCTTGTTAGAGGTAGATGGAGGCGGCGGCTG +
Preference number: 1 (lower is better)
Translates to: CGLVQEPPLGYQAPG*QVRGLVRGRWRRRL
Trigger: CAGCCGCCGCCTCCATCTACCTCTAACAAGGCCCCTTACTTGGCATCCTGGAGCCTGATAACCAAGAGGAGGCTCCTGAACAAGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 90 bp TTAATGAACCAGGAGCAGCTGCTACTGTCCTTCTGGAGGGCCATGTaGCACCTCTGCTCAGCCCACATCACACACTGCCCAGGGCTATGT +
Preference number: 1 (lower is better)
Translates to: LMNQEQLLLSFWRAM*HLCSAHITHCPGLC
Trigger: ACATAGCCCTGGGCAGTGTGTGATGTGGGCTGAGCAGAGGTGGCACATGGCCCTCCAGAAGGACAGTAGCAGCTGCTCCTGGTTCATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp CAGCCCAGATGTGTCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTaGCCTTGTTCAGGAGCCTCCTCTTGGTTATCAGGCTCCAGGATG +
Preference number: 1 (lower is better)
Translates to: QPRCVSAADQSTVPL*PCSGASSWLSGSRM
Trigger: CATCCTGGAGCCTGATAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGACACATCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp TTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTaGGCAGCTCCTGCCACGCACAGTGGTGATGGCGTTATGGTCTGC +
Preference number: 1 (lower is better)
Translates to: FPGEVRGNALDKRIQ*AAPATHSGDGVMVC
Trigger: GCAGACCATAACGCCATCACCACTGTGCGTGGCAGGAGCTGCCCACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 90 bp TTCTGGAGGGCCATGTGCCACCTCTGCTCAGCCCACATCACACACTaGCCAGGGCTATGTTGCAACTATAACTGCCACCTGTTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: FWRAMCHLCSAHITH*PGLCCNYNCHLFPS
Trigger: GGAAGGAAACAGGTGGCAGTTATAGTTGCAACATAGCCCTGGGCAGTGTGTGATGTGGGCTGAGCAGAGGTGGCACATGGCCCTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 90 bp CAGTGGGCAGCTCCTGCCACGCACAGTGGTGATGGCGTTATGGTCTaGTTCATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGC +
Preference number: 1 (lower is better)
Translates to: QWAAPATHSGDGVMV*FIYSSQGTSQTGCS
Trigger: GCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGATGAAGCAGACCATAACGCCATCACCACTGTGCGTGGCAGGAGCTGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp CAGTTTGCTTGTGGTGTGGTTAGGATATTGGTCCCCTCATCTCTGTaGGGCCACTGTGCTTCCTGCCTACCTAAAGACAGCTGGCCCCAG +
Preference number: 1 (lower is better)
Translates to: QFACGVVRILVPSSL*GHCASCLPKDSWPQ
Trigger: CTGGGGCCAGCTGTCTTTAGGTAGGCAGGAAGCACAGTGGCCCCACAGAGATGAGGGGACCAATATCCTAACCACACCACAAGCAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp CCTGTGGGACATGATCACATCCGCAGTGCTCTAGTTCCAGTACTGTaGCTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATG +
Preference number: 1 (lower is better)
Translates to: PVGHDHIRSALVPVL*LQHGWDRFTDGGNM
Trigger: CATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACTGGAACTAGAGCACTGCGGATGTGATCATGTCCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp CACAGCGCCCAGGCTGATTGTGCCACTCAGACGTCATTTGGGCTTTaGCTACATAGCCTCATCTTTTCCAGTGCCACAGTCTGGGGCTTT +
Preference number: 1 (lower is better)
Translates to: HSAQADCATQTSFGL*LHSLIFSSATVWGF
Trigger: AAAGCCCCAGACTGTGGCACTGGAAAAGATGAGGCTATGTAGCCAAAGCCCAAATGACGTCTGAGTGGCACAATCAGCCTGGGCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp GCTATGCCTCCAGGACCACAGAGCTCAACTGCTGGCTTTGATTCTTaGCAAAGGAGAAGGGAGGTCTCCTGGCCTTCCAGGGTTATGAAA +
Preference number: 1 (lower is better)
Translates to: AMPPGPQSSTAGFDS*QRRREVSWPSRVMK
Trigger: TTTCATAACCCTGGAAGGCCAGGAGACCTCCCTTCTCCTTTGCCAAGAATCAAAGCCAGCAGTTGAGCTCTGTGGTCCTGGAGGCATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp TACTGTTGCCATGGTGTCAGTTTGCTTGTGGTGTGGTTAGGATATTaGTCCCCTCATCTCTGTGGGGCCACTGTGCTTCCTGCCTACCTA +
Preference number: 1 (lower is better)
Translates to: YCCHGVSLLVVWLGY*SPHLCGATVLPAYL
Trigger: TAGGTAGGCAGGAAGCACAGTGGCCCCACAGAGATGAGGGGACCAATATCCTAACCACACCACAAGCAAACTGACACCATGGCAACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp CCAGGGCTATGTTGCAACTATAACTGCCACCTGTTTCCTTCCTGCTaGCACCAGAAGGCTCAACACTCCAGCTCAGGCAACCATTTAGTC +
Preference number: 1 (lower is better)
Translates to: PGLCCNYNCHLFPSC*HQKAQHSSSGNHLV
Trigger: GACTAAATGGTTGCCTGAGCTGGAGTGTTGAGCCTTCTGGTGTCAGCAGGAAGGAAACAGGTGGCAGTTATAGTTGCAACATAGCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp CCATTTCTGCCACACAAAACTGTTCTGCCCACTCCCCACCAGTCTTaGCTTTGTCTTCTGAGCCACTCTGTGGCTGAATGCCAAGATGTG +
Preference number: 1 (lower is better)
Translates to: PFLPHKTVLPTPHQS*LCLLSHSVAECQDV
Trigger: CACATCTTGGCATTCAGCCACAGAGTGGCTCAGAAGACAAAGTCAAGACTGGTGGGGAGTGGGCAGAACAGTTTTGTGTGGCAGAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 90 bp TGTGTCAAAGTCCTAGGCAAGGAATGTGACCCAAGAGTGACATGCTaGCAGCCATCTTTGGTTACTTGGCTTCCACAGGTTCCTTCTGAG +
Preference number: 1 (lower is better)
Translates to: CVKVLGKECDPRVTC*QPSLVTWLPQVPSE
Trigger: CTCAGAAGGAACCTGTGGAAGCCAAGTAACCAAAGATGGCTGGCAGCATGTCACTCTTGGGTCACATTCCTTGCCTAGGACTTTGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp CACTCCCCACCAGTCTTGACTTTGTCTTCTGAGCCACTCTGTGGCTaGATGCCAAGATGTGTGTGTGTATACTTTCAGTATCCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: HSPPVLTLSSEPLCG*MPRCVCVYFQYPEG
Trigger: GCCTTCTGGATACTGAAAGTATACACACACACATCTTGGCATTCAGCCACAGAGTGGCTCAGAAGACAAAGTCAAGACTGGTGGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 90 bp AACTTAGCTGTTACAAAGCCCACAAGCCCTCAGGAGGTAAGTGTCTaGCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGA +
Preference number: 1 (lower is better)
Translates to: NLAVTKPTSPQEVSV*QSSQGKSEVMLWIR
Trigger: TCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTTGTGGGCTTTGTAACAGCTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp ACAAAACTGTTCTGCCCACTCCCCACCAGTCTTGACTTTGTCTTCTaGGCCACTCTGTGGCTGAATGCCAAGATGTGTGTGTGTATACTT +
Preference number: 1 (lower is better)
Translates to: TKLFCPLPTSLDFVF*ATLWLNAKMCVCIL
Trigger: AAGTATACACACACACATCTTGGCATTCAGCCACAGAGTGGCTCAGAAGACAAAGTCAAGACTGGTGGGGAGTGGGCAGAACAGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 90 bp GAAAGGGAAAGGAACATGATGGGAATGACTGTGGAACATGTACACTaGCTCCCAGATGTGTATATAAAGATAGCCACCCAGGAGCGAGTA +
Preference number: 1 (lower is better)
Translates to: ERERNMMGMTVEHVH*LPDVYIKIATQERV
Trigger: TACTCGCTCCTGGGTGGCTATCTTTATATACACATCTGGGAGGCAGTGTACATGTTCCACAGTCATTCCCATCATGTTCCTTTCCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp GGATTAAAGGTGTGTGCCACTATGCCCCATGACCAACTGAAAACTTaGGTCCTGCTGCATAAGTCTCTACAACATCAAGGTGTACACATG +
Preference number: 1 (lower is better)
Translates to: GLKVCATMPHDQLKT*VLLHKSLQHQGVHM
Trigger: CATGTGTACACCTTGATGTTGTAGAGACTTATGCAGCAGGACTCAAGTTTTCAGTTGGTCATGGGGCATAGTGGCACACACCTTTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp GCCATCCTTAGCTACACACAGAGTTCAGTGTCGGCTTGGGCTATATaGGACTGTCTCAACAGAACAACAAAAATCTTTACTAGCCTCGTA +
Preference number: 1 (lower is better)
Translates to: AILSYTQSSVSAWAI*DCLNRTTKIFTSLV
Trigger: TACGAGGCTAGTAAAGATTTTTGTTGTTCTGTTGAGACAGTCTCATATAGCCCAAGCCGACACTGAACTCTGTGTGTAGCTAAGGATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp GACTTAGAGAAACAGTATGTTAAACTCAAGGGAAGCTTTGCTTTCTaGGCAAAAGAAACCCAATTCCCTCTCCTTTCTGCAATGCCTCCC +
Preference number: 1 (lower is better)
Translates to: DLEKQYVKLKGSFAF*AKETQFPLLSAMPP
Trigger: GGGAGGCATTGCAGAAAGGAGAGGGAATTGGGTTTCTTTTGCTCAGAAAGCAAAGCTTCCCTTGAGTTTAACATACTGTTTCTCTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 90 bp GAACGAAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTaGCTGGGGAGTCACGATTCAGGGCATATAAATATAAGTAGCGTG +
Preference number: 1 (lower is better)
Translates to: ERRLLCLPKTNGIRI*LGSHDSGHINISSV
Trigger: CACGCTACTTATATTTATATGCCCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTTCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR GCA 90 bp TCACAACCACAGTCCAGTTCCAAATTTCAGAGCAACTTTAGCTACTaGAGTAACAACTGCTTGGCAGTCCAGTTTAAACCAACAGCTTAC +
Preference number: 1 (lower is better)
Translates to: SQPQSSSKFQSNFSY*SNNCLAVQFKPTAY
Trigger: GTAAGCTGTTGGTTTAAACTGGACTGCCAAGCAGTTGTTACTGCAGTAGCTAAAGTTGCTCTGAAATTTGGAACTGGACTGTGGTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp GTTCCAAATTTCAGAGCAACTTTAGCTACTGCAGTAACAACTGCTTaGCAGTCCAGTTTAAACCAACAGCTTACCAGTTTTAGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: VPNFRATLATAVTTA*QSSLNQQLTSFSAR
Trigger: CCTGGCACTAAAACTGGTAAGCTGTTGGTTTAAACTGGACTGCCAAGCAGTTGTTACTGCAGTAGCTAAAGTTGCTCTGAAATTTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 90 bp ATTTTAAATATTGTACCTGATCTAAAAACAAAGGCCAGATCAGGATaGACAGGTCACAACCACAGTCCAGTTCCAAATTTCAGAGCAACT +
Preference number: 1 (lower is better)
Translates to: ILNIVPDLKTKARSG*TGHNHSPVPNFRAT
Trigger: AGTTGCTCTGAAATTTGGAACTGGACTGTGGTTGTGACCTGTCCATCCTGATCTGGCCTTTGTTTTTAGATCAGGTACAATATTTAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp AGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTATCAGGCTCCTTCTCCCTCCCCATaGCCTGAGTCACAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: RALFLCGLVQEPPLGYQAPSPSP*PESQVL
Trigger: CAAGACCTGTGACTCAGGGCATGGGGAGGGAGAAGG...AGCCTGATAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCGCCCACATCACACACTaGCCAGGGCTATGTTGCAAC +
Preference number: 2 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSAHITH*PGLCCN
Trigger: GTTGCAACATAGCCCTGGGCAGTGTGTGATGTGGGC...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCACTGCTACTGTCCTTCTaGAGGGCCATGTGCCACCTC +
Preference number: 2 (lower is better)
Translates to: STVTAARLGQIYRRWEHALLLSF*RAMCHL
Trigger: GAGGTGGCACATGGCCCTCCAGAAGGACAGTAGCAG...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 90 bp CGCATCGTCACAGCGCCCAGGCTGATTGTGCCACTCAGACGTCATTaGGGCTTTGGCTACATAGCCTCATCTTTTCCAGTGCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: RIVTAPRLIVPLRRH*GFGYIASSFPVPQS
Trigger: AGACTGTGGCACTGGAAAAGATGAGGCTATGTAGCCAAAGCCCAAATGACGTCTGAGTGGCACAATCAGCCTGGGCGCTGTGACGATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR TCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCCTGTTTCCTTCCTGCTaGCACCAGAAGGCTCAACAC +
Preference number: 2 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSLFPSC*HQKAQH
Trigger: GTGTTGAGCCTTCTGGTGTCAGCAGGAAGGAAACAG...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CCA 90 bp AGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTATCAGGCTCTGAGTCACAGGTCTTaGTCACAGTGGCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: RALFLCGLVQEPPLGYQALSHRS*SQWLRP
Trigger: GGGTCTCAGCCACTGTGACCAAGACCTGTGACTCAG...AGCCTGATAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 90 bp TTACTGTTGCCATGGTGTCAGTTTGCTTGTGGTGTGGTTAGGATATaGGTCCCCTCATCTCTGTGGGGCCACTGTGCTTCCTGCCTACCT +
Preference number: 2 (lower is better)
Translates to: LLLPWCQFACGVVRI*VPSSLWGHCASCLP
Trigger: AGGTAGGCAGGAAGCACAGTGGCCCCACAGAGATGAGGGGACCAATATCCTAACCACACCACAAGCAAACTGACACCATGGCAACAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp GGTTCATCATGCAGATCAGGGTGGCCTCAAGGTTGCAGACATCTACCTGCCTCTTATCAGGCTCCAGGATaGCAAGTAAGGGGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: GSSCRSGWPQGCRHLPASYQAPG*QVRGLV
Trigger: AACAAGGCCCCTTACTTGGCATCCTGGAGCCTGATA...AGAGGCAGGTAGATGTCTGCAACCTTGAGGCCACCCTGATCTGCATGATGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTAACTCATGGCAGGCATaGAACCTCAGCACGTGGAGG +
Preference number: 2 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPNSWQA*NLSTWR
Trigger: CCTCCACGTGCTGAGGTTGCATGCCTGCCATGAGTT...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CCA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTACAGACTGCTGATCCTTaGAAAATTAAGGACACCCCC +
Preference number: 2 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLQTADP*KIKDTP
Trigger: GGGGGTGTCCTTAATTTTCCAAGGATCAGCAGTCTG...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 90 bp CTAGGCAAGGAATGTGACCCAAGAGTGACATGCTGCCAGCCATCTTaGGTTACTTGGCTTCCACAGGTTCCTTCTGAGACCTCAGTAGTG +
Preference number: 2 (lower is better)
Translates to: LGKECDPRVTCCQPS*VTWLPQVPSETSVV
Trigger: CACTACTGAGGTCTCAGAAGGAACCTGTGGAAGCCAAGTAACCAAAGATGGCTGGCAGCATGTCACTCTTGGGTCACATTCCTTGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 90 bp GAATTTGGCCAGGGCTCCCTGGGAGCTGGCCCATTGTTATTACTGTaGCCATGGTGTCAGTTTGCTTGTGGTGTGGTTAGGATATTGGTC +
Preference number: 2 (lower is better)
Translates to: EFGQGSLGAGPLLLL*PWCQFACGVVRILV
Trigger: GACCAATATCCTAACCACACCACAAGCAAACTGACACCATGGCAACAGTAATAACAATGGGCCAGCTCCCAGGGAGCCCTGGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR TCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTACTCCCCACCAGTCTTaGCTTTGTCTTCTGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPTPHQS*LCLLSH
Trigger: GTGGCTCAGAAGACAAAGTCAAGACTGGTGGGGAGT...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR TCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCATTAACTGCCTCTATCTaGACTCAGCCCCAAGGATTG +
Preference number: 2 (lower is better)
Translates to: STVTAARLGQIYRRWEHALTASI*TQPQGL
Trigger: CAATCCTTGGGGCTGAGTTCAGATAGAGGCAGTTAA...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCACCAAGAGTGACATGCTaGCAGCCATCTTTGGTTACT +
Preference number: 2 (lower is better)
Translates to: STVTAARLGQIYRRWEHAPRVTC*QPSLVT
Trigger: AGTAACCAAAGATGGCTGGCAGCATGTCACTCTTGG...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CCA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCATCAGAGGTAATGCTCTaGATAAGAGGATCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSSEVML*IRGSSG
Trigger: CCCACTGGATCCTCTTATCCAGAGCATTACCTCTGA...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCATGTTGCAACTATAACTaGCACCTGTTTCCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: STVTAARLGQIYRRWEHACCNYN*HLFPSC
Trigger: GCAGGAAGGAAACAGGTGGCAGTTATAGTTGCAACA...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTCCTCATCTTTTCCAGTaGCACAGTCTGGGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSPHLFQ*HSLGLS
Trigger: AGAAAGCCCCAGACTGTGGCACTGGAAAAGATGAGG...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 90 bp ATCCCCTGCCCCGTGATAAGAGAAGGCAACAGGATCAAGAGTGATTaGCCAAAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGA +
Preference number: 2 (lower is better)
Translates to: IPCPVIREGNRIKSD*PKERTVSRVSHCLG
Trigger: TCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTTTGGCAAATCACTCTTGATCCTGTTGCCTTCTCTTATCACGGGGCAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR-3UTR TCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGTCCCTCCCCATGCCCTaGGTCACAGGTCTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: GSLNSYFTKLARLGIELRSLPMP*VTGLGH
Trigger: GTGACCAAGACCTGTGACTCAGGGCATGGGGAGGGA...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR TCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTTCGGCTTGGGCTATATaGGACTGTCTCAACAGAACA +
Preference number: 2 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPSAWAI*DCLNRT
Trigger: TGTTCTGTTGAGACAGTCTCATATAGCCCAAGCCGA...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGTTCTGGAGGGCCATGTaGCACCTCTGCTCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: GSLNSYFTKLARLGIELRFWRAM*HLCSAH
Trigger: GTGGGCTGAGCAGAGGTGGCACATGGCCCTCCAGAA...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CCA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTCTGGCTGTAGCCATTTaGCATCTGCTTTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSLAVAI*HLLFIQ
Trigger: CTGGATGAAAAGCAGATGCCAAATGGCTACAGCCAG...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTCAGGGACTTGAGCAATaGCTTGGTAGAGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: IYSSQGTSQTGCSHLASAQGLEQ*LGRGKE
Trigger: TTCTTTGCCTCTACCAAGGCATTGCTCAAGTCCCTG...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCCCAGGTCTAATTTACTaGAGCTTTTTGGAGCAAATT +
Preference number: 2 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSPGLIY*SFLEQI
Trigger: AATTTGCTCCAAAAAGCTGCAGTAAATTAGACCTGG...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCCACCAGGGGACCAGGTaGGGACTAAAAGGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFHQGTR*GLKGAF
Trigger: GAAGGCACCTTTTAGTCCCCACCTGGTCCCCTGGTG...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR TCA 90 bp ACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACACCACATGGAAGTGGGGCTaGGCCAGGATTGGCAATCTC +
Preference number: 2 (lower is better)
Translates to: TSYWSSISSTVTATILYTTWKWG*ARIGNL
Trigger: GAGATTGCCAATCCTGGCTCAGCCCCACTTCCATGT...GGTGTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR-3UTR TCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCTCCACAGGTTCCTTCTaGGACCTCAGTAGTGTGACC +
Preference number: 2 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFSTGSF*DLSSVT
Trigger: GGTCACACTACTGAGGTCTCAGAAGGAACCTGTGGA...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR GCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGGTGGGGACTAAAAGGTaGCTTCCTCCCAGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: GSLNSYFTKLARLGIELRVGTKR*LPPRFL
Trigger: AAGGAACCTGGGAGGAAGGCACCTTTTAGTCCCCAC...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR TCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGGACCAACTGAAAACTTaGGTCCTGCTGCATAAGTCT +
Preference number: 2 (lower is better)
Translates to: GSLNSYFTKLARLGIELRDQLKT*VLLHKS
Trigger: AGACTTATGCAGCAGGACTCAAGTTTTCAGTTGGTC...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR TCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGCAACAGGATCAAGAGTaGTTTGCCAAAGGAAAGAAC +
Preference number: 2 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVQQDQE*FAKGKN
Trigger: GTTCTTTCCTTTGGCAAATCACTCTTGATCCTGTTG...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR-3UTR CCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGTTTACCCAAGACAAATaGAATCAGAATCTGACTGGG +
Preference number: 2 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVFTQDK*NQNLTG
Trigger: CCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAA...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR GCA 72 bp CAGGAGCAGCTGCTACTGTCCTTCTGGAGGGCCATGTaGCACCTCTGCTCAGCCCACATCACACACTGCCCA +
Preference number: 3 (lower is better)
Translates to: QEQLLLSFWRAM*HLCSAHITHCP
Trigger: TGGGCAGTGTGTGATGTGGGCTGAGCAGAGGTGGCACATGGCCCTCCAGAAGGACAGTAGCAGCTGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CCAGGATGCCAAGTAAGGGGCCTTGTTAGAGGTAGATaGAGGCGGCGGCTGTCCTGCTTCCCACCGCATCGT +
Preference number: 3 (lower is better)
Translates to: PGCQVRGLVRGR*RRRLSCFPPHR
Trigger: ACGATGCGGTGGGAAGCAGGACAGCCGCCGCCTCCATCTACCTCTAACAAGGCCCCTTACTTGGCATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CAGGGAGGTCATGATGATGGCCACCAGGGGACCAGGTaGGGACTAAAAGGTGCCTTCCTCCCAGGTTCCTTG +
Preference number: 3 (lower is better)
Translates to: QGGHDDGHQGTR*GLKGAFLPGSL
Trigger: CAAGGAACCTGGGAGGAAGGCACCTTTTAGTCCCCACCTGGTCCCCTGGTGGCCATCATCATGACCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp TCTGCAACCCTCGCAGCCCAGATGTGTCTCTGCAGCTaGCCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGG +
Preference number: 3 (lower is better)
Translates to: SATLAAQMCLCS*PEHCSSVALFR
Trigger: CCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGACACATCTGGGCTGCGAGGGTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp GAGGATCCAGTGGGCAGCTCCTGCCACGCACAGTGGTaGTGGCGTTATGGTCTGCTTCATCTACAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: EDPVGSSCHAQW*WRYGLLHLQLP
Trigger: TGGGAGCTGTAGATGAAGCAGACCATAACGCCATCACCACTGTGCGTGGCAGGAGCTGCCCACTGGATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp TGGCTTCCACAGGTTCCTTCTGAGACCTCAGTAGTGTaGCCTGCTGACAGACCTGAGGGCAGGGACACAGCA +
Preference number: 3 (lower is better)
Translates to: WLPQVPSETSVV*PADRPEGRDTA
Trigger: TGCTGTGTCCCTGCCCTCAGGTCTGTCAGCAGGTCACACTACTGAGGTCTCAGAAGGAACCTGTGGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp GCCATGTGCCACCTCTGCTCAGCCCACATCACACACTaGCCAGGGCTATGTTGCAACTATAACTGCCACCTG +
Preference number: 3 (lower is better)
Translates to: AMCHLCSAHITH*PGLCCNYNCHL
Trigger: CAGGTGGCAGTTATAGTTGCAACATAGCCCTGGGCAGTGTGTGATGTGGGCTGAGCAGAGGTGGCACATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTaGATAAGAGGATCCAGTGGGCAGCTCCTGCCACGC +
Preference number: 3 (lower is better)
Translates to: CQSSQGKSEVML*IRGSSGQLLPR
Trigger: GCGTGGCAGGAGCTGCCCACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CCACCCAGGAGCGAGTACAGGACATCCTTGCTTAGATaGTTAGTCAGCACGCCAGCCAGCCAGCCAGAACTT +
Preference number: 3 (lower is better)
Translates to: PPRSEYRTSLLR*LVSTPASQPEL
Trigger: AAGTTCTGGCTGGCTGGCTGGCGTGCTGACTAACCATCTAAGCAAGGATGTCCTGTACTCGCTCCTGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp AGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTATCAGGCTCCTGAGTCACAGGTCTaGGTCACAGTGGCTGAGACC +
Preference number: 3 (lower is better)
Translates to: RALFLCGLVQEPPLGYQAPESQV*VTVAET
Trigger: GGTCTCAGCCACTGTGACCAAGACCTGTGACTCAGG...AGCCTGATAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp TATGCCTCCAGGACCACAGAGCTCAACTGCTGGCTTTaGTTCTTGGCAAAGGAGAAGGGAGGTCTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: YASRTTELNCWL*FLAKEKGGLLA
Trigger: GGCCAGGAGACCTCCCTTCTCCTTTGCCAAGAATCAAAGCCAGCAGTTGAGCTCTGTGGTCCTGGAGGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp ACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTaGTTATCAGGCTCCAGGATGCCAAGTAAGGGGCCT +
Preference number: 3 (lower is better)
Translates to: TVPLWPCSGASS*LSGSRMPSKGP
Trigger: AGGCCCCTTACTTGGCATCCTGGAGCCTGATAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp GAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTaGGCAGCTCCTGCCACGCACAGTGGTGATGGCGTT +
Preference number: 3 (lower is better)
Translates to: EVRGNALDKRIQ*AAPATHSGDGV
Trigger: AACGCCATCACCACTGTGCGTGGCAGGAGCTGCCCACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCTTCAGGAGCCTCCTCTaGGTTATCAGGCTCCAGGAT +
Preference number: 3 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSFRSLL*VIRLQD
Trigger: ATCCTGGAGCCTGATAACCAAGAGGAGGCTCCTGAA...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp TGTGGTGTGGTTAGGATATTGGTCCCCTCATCTCTGTaGGGCCACTGTGCTTCCTGCCTACCTAAAGACAGC +
Preference number: 3 (lower is better)
Translates to: CGVVRILVPSSL*GHCASCLPKDS
Trigger: GCTGTCTTTAGGTAGGCAGGAAGCACAGTGGCCCCACAGAGATGAGGGGACCAATATCCTAACCACACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CAGCTTGTAGCTCCAGCTGTCCAGCATAAGAGAATTTaGCCAGGGCTCCCTGGGAGCTGGCCCATTGTTATT +
Preference number: 3 (lower is better)
Translates to: QLVAPAVQHKRI*PGLPGSWPIVI
Trigger: AATAACAATGGGCCAGCTCCCAGGGAGCCCTGGCCAAATTCTCTTATGCTGGACAGCTGGAGCTACAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCGACAGTATCATAGTCTaGGCTGGCCTGAGGTTCATC +
Preference number: 3 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSDSIIV*AGLRFI
Trigger: GATGAACCTCAGGCCAGCCAAGACTATGATACTGTC...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp TTCTGCCCACTCCCCACCAGTCTTGACTTTGTCTTCTaGGCCACTCTGTGGCTGAATGCCAAGATGTGTGTG +
Preference number: 3 (lower is better)
Translates to: FCPLPTSLDFVF*ATLWLNAKMCV
Trigger: CACACACATCTTGGCATTCAGCCACAGAGTGGCTCAGAAGACAAAGTCAAGACTGGTGGGGAGTGGGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp CCACACAAAACTGTTCTGCCCACTCCCCACCAGTCTTaGCTTTGTCTTCTGAGCCACTCTGTGGCTGAATGC +
Preference number: 3 (lower is better)
Translates to: PHKTVLPTPHQS*LCLLSHSVAEC
Trigger: GCATTCAGCCACAGAGTGGCTCAGAAGACAAAGTCAAGACTGGTGGGGAGTGGGCAGAACAGTTTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp GTGACAACTGTCACAATGGCCCAGGGACTTGAGCAATaGCTTGGTAGAGGCAAAGAATGGACAGGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: VTTVTMAQGLEQ*LGRGKEWTGAA
Trigger: AGCAGCTCCTGTCCATTCTTTGCCTCTACCAAGGCATTGCTCAAGTCCCTGGGCCATTGTGACAGTTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp GCTCCTGCCACGCACAGTGGTGATGGCGTTATGGTCTaGTTCATCTACAGCTCCCAAGGTACTTCTCAAACT +
Preference number: 3 (lower is better)
Translates to: APATHSGDGVMV*FIYSSQGTSQT
Trigger: AGTTTGAGAAGTACCTTGGGAGCTGTAGATGAAGCAGACCATAACGCCATCACCACTGTGCGTGGCAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp GTTACAAAGCCCACAAGCCCTCAGGAGGTAAGTGTCTaGCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTC +
Preference number: 3 (lower is better)
Translates to: VTKPTSPQEVSV*QSSQGKSEVML
Trigger: GAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTTGTGGGCTTTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp AGGGCTCCCTGGGAGCTGGCCCATTGTTATTACTGTTaGCATGGTGTCAGTTTGCTTGTGGTGTGGTTAGGA +
Preference number: 3 (lower is better)
Translates to: RAPWELAHCYYC*HGVSLLVVWLG
Trigger: TCCTAACCACACCACAAGCAAACTGACACCATGGCAACAGTAATAACAATGGGCCAGCTCCCAGGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CTATCTCAGACAAACCATGGCGGTGGCACAGGACACTaGTCCAATATGCAATATTCAGGCTGGGGGAATGGC +
Preference number: 3 (lower is better)
Translates to: LSQTNHGGGTGH*SNMQYSGWGNG
Trigger: GCCATTCCCCCAGCCTGAATATTGCATATTGGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CATGGTGTCAGTTTGCTTGTGGTGTGGTTAGGATATTaGTCCCCTCATCTCTGTGGGGCCACTGTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: HGVSLLVVWLGY*SPHLCGATVLP
Trigger: AGGAAGCACAGTGGCCCCACAGAGATGAGGGGACCAATATCCTAACCACACCACAAGCAAACTGACACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCACCACCAGTCTTGACTTaGTCTTCTGAGCCACTCTGT +
Preference number: 3 (lower is better)
Translates to: STVTAARLGQIYRRWEHAPPVLT*SSEPLC
Trigger: ACAGAGTGGCTCAGAAGACAAAGTCAAGACTGGTGG...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp GGTTCATCATGCAGATCAGGGTGGCCTCAAGGTTGCAGACATCTACCTGCCTCTCAACAGGCTGCAACTTaGTGTCAAAGTCCTAGGCAA +
Preference number: 3 (lower is better)
Translates to: GSSCRSGWPQGCRHLPASQQAAT*CQSPRQ
Trigger: TTGCCTAGGACTTTGACACAAAGTTGCAGCCTGTTG...AGAGGCAGGTAGATGTCTGCAACCTTGAGGCCACCCTGATCTGCATGATGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp GTCCTAGGCAAGGAATGTGACCCAAGAGTGACATGCTaGCAGCCATCTTTGGTTACTTGGCTTCCACAGGTT +
Preference number: 3 (lower is better)
Translates to: VLGKECDPRVTC*QPSLVTWLPQV
Trigger: AACCTGTGGAAGCCAAGTAACCAAAGATGGCTGGCAGCATGTCACTCTTGGGTCACATTCCTTGCCTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp AGGAGCCATTCAAGAGAGGAACCTGTTCACCATTTCTaGCACACAAAACTGTTCTGCCCACTCCCCACCAGT +
Preference number: 3 (lower is better)
Translates to: RSHSREEPVHHF*HTKLFCPLPTS
Trigger: ACTGGTGGGGAGTGGGCAGAACAGTTTTGTGTGGCAGAAATGGTGAACAGGTTCCTCTCTTGAATGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CAGGCTGATTGTGCCACTCAGACGTCATTTGGGCTTTaGCTACATAGCCTCATCTTTTCCAGTGCCACAGTC +
Preference number: 3 (lower is better)
Translates to: QADCATQTSFGL*LHSLIFSSATV
Trigger: GACTGTGGCACTGGAAAAGATGAGGCTATGTAGCCAAAGCCCAAATGACGTCTGAGTGGCACAATCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CCAAGAGTGACATGCTGCCAGCCATCTTTGGTTACTTaGCTTCCACAGGTTCCTTCTGAGACCTCAGTAGTG +
Preference number: 3 (lower is better)
Translates to: PRVTCCQPSLVT*LPQVPSETSVV
Trigger: CACTACTGAGGTCTCAGAAGGAACCTGTGGAAGCCAAGTAACCAAAGATGGCTGGCAGCATGTCACTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp AAGCCCTCAGGAGGTAAGTGTCTGCCAATCTTCCCAGGGGAAGTCAGAGGTAATACTGGCTGTAGCCATTaGGCATCTGCTTTTCATCCA +
Preference number: 3 (lower is better)
Translates to: KPSGGKCLPIFPGEVRGNTGCSH*ASAFHP
Trigger: TGGATGAAAAGCAGATGCCAAATGGCTACAGCCAGT...ATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp AAAGTCCTAGGCAAGGAATGTGACCCAAGAGTGACATaGTGCCAGCCATCTTTGGTTACTTGGCTTCCACAG +
Preference number: 3 (lower is better)
Translates to: KVLGKECDPRVT*CQPSLVTWLPQ
Trigger: CTGTGGAAGCCAAGTAACCAAAGATGGCTGGCAGCATGTCACTCTTGGGTCACATTCCTTGCCTAGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp TATTACTGTTGCCATGGTGTCAGTTTGCTTGTGGTGTaGTTAGGATATTGGTCCCCTCATCTCTGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: YYCCHGVSLLVV*LGYWSPHLCGA
Trigger: GGCCCCACAGAGATGAGGGGACCAATATCCTAACCACACCACAAGCAAACTGACACCATGGCAACAGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp TATACTTTCAGTATCCAGAAGGCCAGGCATGGCTGCTaGCTTTCTCAATACAGGGGCACACAGTATTCACCA +
Preference number: 3 (lower is better)
Translates to: YTFSIQKARHGC*LSQYRGTQYSP
Trigger: TGGTGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTGGATACTGAAAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp ACACTGGTCCAATATGCAATATTCAGGCTGGGGGAATaGCATGGACTTAACGTAGCAGATGGATGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: TLVQYAIFRLGE*HGLNVADGWPR
Trigger: TCTTGGCCATCCATCTGCTACGTTAAGTCCATGCCATTCCCCCAGCCTGAATATTGCATATTGGACCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp GTGTGTGCCACTATGCCCCATGACCAACTGAAAACTTaGGTCCTGCTGCATAAGTCTCTACAACATCAAGGT +
Preference number: 3 (lower is better)
Translates to: VCATMPHDQLKT*VLLHKSLQHQG
Trigger: ACCTTGATGTTGTAGAGACTTATGCAGCAGGACTCAAGTTTTCAGTTGGTCATGGGGCATAGTGGCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCAAATCCCATACCCTCTaGACCAGGACCAACAGGCTG +
Preference number: 3 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFKSHTL*TRTNRL
Trigger: CAGCCTGTTGGTCCTGGTCAAGAGGGTATGGGATTT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp AGGAACATGATGGGAATGACTGTGGAACATGTACACTaGCTCCCAGATGTGTATATAAAGATAGCCACCCAG +
Preference number: 3 (lower is better)
Translates to: RNMMGMTVEHVH*LPDVYIKIATQ
Trigger: CTGGGTGGCTATCTTTATATACACATCTGGGAGGCAGTGTACATGTTCCACAGTCATTCCCATCATGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp TTAGAAAACAAGTTAACAGACTGTCTGTACTGCAACTaGTGTGTGCTCTGTCCAGCTTGTAGCTCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: LENKLTDCLYCN*CVLCPACSSSC
Trigger: ACAGCTGGAGCTACAAGCTGGACAGAGCACACAGCAGTTGCAGTACAGACAGTCTGTTAACTTGTTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp AGCTTCTTAGAAAACAAGTTAACAGACTGTCTGTACTaGAACTGCTGTGTGCTCTGTCCAGCTTGTAGCTCC +
Preference number: 3 (lower is better)
Translates to: SFLENKLTDCLY*NCCVLCPACSS
Trigger: GGAGCTACAAGCTGGACAGAGCACACAGCAGTTGCAGTACAGACAGTCTGTTAACTTGTTTTCTAAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp CTAAAACAAAGGAACAGAGAATTAACTGCCTCTATCTaGACTCAGCCCCAAGGATTGGTAACCTCTAAGGGG +
Preference number: 3 (lower is better)
Translates to: LKQRNRELTASI*TQPQGLVTSKG
Trigger: CCCCTTAGAGGTTACCAATCCTTGGGGCTGAGTTCAGATAGAGGCAGTTAATTCTCTGTTCCTTTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp GGAATAACCTACCTAGATATCTATGTGAATGAGGCTTaGCGGGGGAGCACCATAACTCTGAAGGGATTTCAA +
Preference number: 3 (lower is better)
Translates to: GITYLDIYVNEA*RGSTITLKGFQ
Trigger: TTGAAATCCCTTCAGAGTTATGGTGCTCCCCCGTCAAGCCTCATTCACATAGATATCTAGGTAGGTTATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR GCA 72 bp TTCCAGTCCTCTAAAACAAAGGAACAGAGAATTAACTaGCTCTATCTGAACTCAGCCCCAAGGATTGGTAAC +
Preference number: 3 (lower is better)
Translates to: FQSSKTKEQRIN*LYLNSAPRIGN
Trigger: GTTACCAATCCTTGGGGCTGAGTTCAGATAGAGGCAGTTAATTCTCTGTTCCTTTGTTTTAGAGGACTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp CAGTCCAGTTCCAAATTTCAGAGCAACTTTAGCTACTaGAGTAACAACTGCTTGGCAGTCCAGTTTAAACCA +
Preference number: 3 (lower is better)
Translates to: QSSSKFQSNFSY*SNNCLAVQFKP
Trigger: TGGTTTAAACTGGACTGCCAAGCAGTTGTTACTGCAGTAGCTAAAGTTGCTCTGAAATTTGGAACTGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp AGCTACACACAGAGTTCAGTGTCGGCTTGGGCTATATaGGACTGTCTCAACAGAACAACAAAAATCTTTACT +
Preference number: 3 (lower is better)
Translates to: SYTQSSVSAWAI*DCLNRTTKIFT
Trigger: AGTAAAGATTTTTGTTGTTCTGTTGAGACAGTCTCATATAGCCCAAGCCGACACTGAACTCTGTGTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp CTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTaGCTGGGGAGTCACGATTCAGGGCATATAAATATA +
Preference number: 3 (lower is better)
Translates to: LLCLPKTNGIRI*LGSHDSGHINI
Trigger: TATATTTATATGCCCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR GCA 72 bp AAGTCCAGCTATTCTCTGACTTCACTGAACGAAGACTaGTGTGTTTACCCAAGACAAATGGAATCAGAATCT +
Preference number: 3 (lower is better)
Translates to: KSSYSLTSLNED*CVYPRQMESES
Trigger: AGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTTCGTTCAGTGAAGTCAGAGAATAGCTGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR CCA 72 bp TTCAGAGCAACTTTAGCTACTGCAGTAACAACTGCTTaGCAGTCCAGTTTAAACCAACAGCTTACCAGTTTT +
Preference number: 3 (lower is better)
Translates to: FRATLATAVTTA*QSSLNQQLTSF
Trigger: AAAACTGGTAAGCTGTTGGTTTAAACTGGACTGCCAAGCAGTTGTTACTGCAGTAGCTAAAGTTGCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR-3UTR CAA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGAGGATCAAGAGTGATTaGCCAAAGGAAAGAACAGTG +
Preference number: 3 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVRIKSD*PKERTV
Trigger: CACTGTTCTTTCCTTTGGCAAATCACTCTTGATCCT...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR TCA 72 bp AAACAGTATGTTAAACTCAAGGGAAGCTTTGCTTTCTaGGCAAAAGAAACCCAATTCCCTCTCCTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: KQYVKLKGSFAF*AKETQFPLLSA
Trigger: TGCAGAAAGGAGAGGGAATTGGGTTTCTTTTGCTCAGAAAGCAAAGCTTCCCTTGAGTTTAACATACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR GCA 72 bp CCTCATATTATTTATTTGGCATTTATTCTAAGCTTTTaGGCACAATGCCTGTGGGACATGATCACATCCGCA +
Preference number: 3 (lower is better)
Translates to: PHIIYLAFILSF*AQCLWDMITSA
Trigger: TGCGGATGTGATCATGTCCCACAGGCATTGTGCGCAAAAGCTTAGAATAAATGCCAAATAAATAATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CAGTTTGATAACAGTGTTAGAGTGAAGCCAGAAAGCTaGCTTAGTTTTAAAGTTCAAGCCAAGGCACTTTCT +
Preference number: 3 (lower is better)
Translates to: QFDNSVRVKPES*LSFKVQAKALS
Trigger: AGAAAGTGCCTTGGCTTGAACTTTAAAACTAAGCCAGCTTTCTGGCTTCACTCTAACACTGTTATCAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CCA 72 bp CTTTCAGAGCAAATAGAACAGCAGAGTACAAGTTATTaGAGTTCTATATCTTCCACAGTGACAGCCACAATC +
Preference number: 3 (lower is better)
Translates to: LSEQIEQQSTSY*SSISSTVTATI
Trigger: GATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTCTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR CCA 72 bp GCTCAAAATGATAGTAGTGAGGAGCTCTGTCATCTGTaGGGTAGCCTTAATAGTTATTTTACTAAATTAGCC +
Preference number: 3 (lower is better)
Translates to: AQNDSSEELCHL*GSLNSYFTKLA
Trigger: GGCTAATTTAGTAAAATAACTATTAAGGCTACCCCACAGATGACAGAGCTCCTCACTACTATCATTTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR TCA 72 bp TCCCTTAAAGATTCCAGTTTGATAACAGTGTTAGAGTaGAGCCAGAAAGCTGGCTTAGTTTTAAAGTTCAAG +
Preference number: 3 (lower is better)
Translates to: SLKDSSLITVLE*SQKAGLVLKFK
Trigger: CTTGAACTTTAAAACTAAGCCAGCTTTCTGGCTTCACTCTAACACTGTTATCAAACTGGAATCTTTAAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCCTGCCCCGCTTGATCTaGGTGCGATGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSLPRLI*VRWSAR
Trigger: CCTGGCTGACCATCGCACTCAGATCAAGCGGGGCAG...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp TCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTGCCTTGGAGCAGAGCTaGGTGAGCATGCTCTGGACG +
Preference number: 4 (lower is better)
Translates to: SLQLTRALFLCGLVQEPPALEQS*VSMLWT
Trigger: CGTCCAGAGCATGCTCACCCAGCTCTGCTCCAAGGC...AGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp TCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGGGGTCAAAACTaGGTGCCTCTGTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLQLTRALFLCGLVQEPPLGGQN*VPLLPP
Trigger: TGGAGGCAACAGAGGCACGCAGTTTTGACCCCCAAG...AGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCAGTGTAGGCTGGGGTTaGGAGAGGCACCAAGTGACC +
Preference number: 4 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSSVGWG*ERHQVT
Trigger: GGTCACTTGGTGCCTCTCCCAACCCCAGCCTACACT...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CTCCAGCTCAGGCAACCATTTAGTCACACCAACCCTTCTCCCTCCCCATGCCCTGGAGGGTACCCACATTaGCAGGAGAGGCCACTCTTT +
Preference number: 4 (lower is better)
Translates to: LQLRQPFSHTNPSPSPCPGGYPH*QERPLF
Trigger: AAAGAGTGGCCTCTCCTGCCAATGTGGGTACCCTCC...AGGGCATGGGGAGGGAGAAGGGTTGGTGTGACTAAATGGTTGCCTGAGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCACAAGTGTCCTCCCACTaGGCAGGGAGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSQVSSH*AGSRWL
Trigger: CAGCCATCTACTCCCTGCTCAGTGGGAGGACACTTG...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp AAGCCCTCAGGAGGTAAGTGTCTGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGTGGGTGGTCCCCGGTaGCTCCTGCATATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: KPSGGKCLPIFPGEVRGNVGGPR*LLHIVQ
Trigger: CTGCACTATATGCAGGAGTCACCGGGGACCACCCAC...ATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTAGGTTTGCCCCCTGGCTaGCATAAGGAAAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLGLPPG*HKEREG
Trigger: TCCCTCTCTTTCCTTATGCCAGCCAGGGGGCAAACC...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTGGACGTAGTCAAACCTaGGCAGTGGGTGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSGRSQT*AVGGWS
Trigger: GGACCACCCACCCACTGCTCAGGTTTGACTACGTCC...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCAAGCGCTGTGGGGGAATaGTCACCACACTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSSAVGE*SPHCPH
Trigger: ATGAGGACAGTGTGGTGAGCATTCCCCCACAGCGCT...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AAGCCCTCAGGAGGTAAGTGTCTGCCAATCTTCCCAGGGGAAGTCAGAGGTAATACTCCGAAGTCCACGTaGAGCCCCTGGTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KPSGGKCLPIFPGEVRGNTPKST*SPWSFC
Trigger: ACAGAAGGACCAGGGGCTCCACGTGGACTTCGGAGT...ATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCACAGGGAGTAGATGGCTaGGTGGGCAAAAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHAQGVDG*VGKRVL
Trigger: CAGTACCCTTTTGCCCACCCAGCCATCTACTCCCTG...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 72 bp CCATGGTGTCAGTTTGCTTGTGGTGTGGTTAGGATATaGGTCCCCTCATCTCTGTGGGGCCACTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PWCQFACGVVRI*VPSSLWGHCAS
Trigger: GGAAGCACAGTGGCCCCACAGAGATGAGGGGACCAATATCCTAACCACACCACAAGCAAACTGACACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 72 bp CAGGGCTCCCTGGGAGCTGGCCCATTGTTATTACTGTaGCCATGGTGTCAGTTTGCTTGTGGTGTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: QGSLGAGPLLLL*PWCQFACGVVR
Trigger: CCTAACCACACCACAAGCAAACTGACACCATGGCAACAGTAATAACAATGGGCCAGCTCCCAGGGAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp GGTTCATCATGCAGATCAGGGTGGCCTCAAGGTTGCAGACATCTACCTGCCTCTAGGATGGCCTACGAATaGAGCCTGGTAATCCACCGA +
Preference number: 4 (lower is better)
Translates to: GSSCRSGWPQGCRHLPASRMAYE*SLVIHR
Trigger: TCGGTGGATTACCAGGCTTCATTCGTAGGCCATCCT...AGAGGCAGGTAGATGTCTGCAACCTTGAGGCCACCCTGATCTGCATGATGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp GGTTCATCATGCAGATCAGGGTGGCCTCAAGGTTGCAGACATCTACCTGCCTCTGGGCCAGGGTCTGAGTaGAATACTCAGTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GSSCRSGWPQGCRHLPASGPGSE*NTQCHR
Trigger: TCTGTGACACTGAGTATTTCACTCAGACCCTGGCCC...AGAGGCAGGTAGATGTCTGCAACCTTGAGGCCACCCTGATCTGCATGATGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTGACAGCGTAGGGTCTTaGTGTCCAGGTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSDSVGS*CPGPGC
Trigger: GCATCCTGGACCTGGACAGCAAGACCCTACGCTGTC...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTATGGTAAGCAAGGGCTaGGGTCCCACCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPMVSKG*GPTCSE
Trigger: CTCTGAGCAGGTGGGACCCCAGCCCTTGCTTACCAT...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCACCACAAAGTTCAACTTaGGGTAGGCAGAACCGGGAG +
Preference number: 4 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSPQSST*GRQNRE
Trigger: CTCCCGGTTCTGCCTACCCCAAGTTGAACTTTGTGG...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp TCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTTCGGCCGAGAGCTCTTaGAACTGCTGCATGATTTTA +
Preference number: 4 (lower is better)
Translates to: SLQLTRALFLCGLVQEPPSAESS*NCCMIL
Trigger: TAAAATCATGCAGCAGTTCCAAGAGCTCTCGGCCGA...AGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp GACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGTACATGGGGGCTCAATaGCACGGTGAGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: DCCVYPRQMESESDWGVTYMGAQ*HGEAGL
Trigger: CAGGCCAGCCTCACCGTGCCATTGAGCCCCCATGTA...CGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTGAGCCGGCACTTGCCTaGAAATGGATGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: IYSSQGTSQTGCSHLASAEPALA*KWMAPS
Trigger: TGAGGGGGCCATCCATTTCCAGGCAAGTGCCGGCTC...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCAAGAAAGAGTGTAGGCTaGGGTTGGGAGAGGCACCAA +
Preference number: 4 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSRKSVG*GWERHQ
Trigger: TTGGTGCCTCTCCCAACCCCAGCCTACACTCTTTCT...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCAAGTGCTTCACCGGCTTaGCATAGCAGCCATAGTTGG +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHASASPA*HSSHSW
Trigger: CCAACTATGGCTGCTATGCCAAGCCGGTGAAGCACT...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 72 bp ACAGCGCCCAGGCTGATTGTGCCACTCAGACGTCATTaGGGCTTTGGCTACATAGCCTCATCTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: TAPRLIVPLRRH*GFGYIASSFPV
Trigger: CACTGGAAAAGATGAGGCTATGTAGCCAAAGCCCAAATGACGTCTGAGTGGCACAATCAGCCTGGGCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 72 bp CAACTGTCACAATGGCCCAGGGACTTGAGCAATGCCTaGGTAGAGGCAAAGAATGGACAGGAGCTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: QLSQWPRDLSNA*VEAKNGQELLV
Trigger: CACAAGCAGCTCCTGTCCATTCTTTGCCTCTACCAAGGCATTGCTCAAGTCCCTGGGCCATTGTGACAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCAAGCACAGGTCTCCTCTaGACATGTGTTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHASTGLL*TCVQCG
Trigger: GCCACATTGAACACATGTTCAGAGGAGACCTGTGCT...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTTCCAAGTTGCCCTCCTaGGTCTCATCCGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSSKLPS*VSSGSG
Trigger: ACCAGAACCGGATGAGACTCAGGAGGGCAACTTGGA...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTAAAGGGTACTGGCGGATaGATTTTAAGGCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLKGTGG*ILRHSG
Trigger: GCCAGAATGCCTTAAAATTCATCCGCCAGTACCCTT...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTGGCTGGGGTCCCACCTaGTCAGAGAACTCGGAAATG +
Preference number: 4 (lower is better)
Translates to: IYSSQGTSQTGCSHLASAGWGPT*SENSEM
Trigger: CATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAGCC...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp CTCCAGCTCAGGCAACCATTTAGTCACACCAACCCTTCTCCCTCCCCATGCCCTGAGAGCTCTTGGAACTaGTGCATGATTTTATGCTGG +
Preference number: 4 (lower is better)
Translates to: LQLRQPFSHTNPSPSPCPESSWN*CMILCW
Trigger: CCAGCATAAAATCATGCAGCAGTTCCAAGAGCTCTC...AGGGCATGGGGAGGGAGAAGGGTTGGTGTGACTAAATGGTTGCCTGAGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp GGTTCATCATGCAGATCAGGGTGGCCTCAAGGTTGCAGACATCTACCTGCCTCTCGAATGCCTTCCTGTTaGCCATCTTCAAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: GSSCRSGWPQGCRHLPASRMPSC*PSSSTQ
Trigger: CTGAGTGCTTGAAGATGGGCAACAGGAAGGCATTCG...AGAGGCAGGTAGATGTCTGCAACCTTGAGGCCACCCTGATCTGCATGATGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCATCTGTATCACCAGGCTaGAAGTCAGGGATCTTCGTC +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHASVSPG*KSGIFV
Trigger: GACGAAGATCCCTGACTTGCAGCCTGGTGATACAGA...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp AAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGCTTTCCTTTACTGCGTGCCTCTGTTaGCTCCACCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: KERTVSRVSHCLGSRLSFTACLC*LHPRVL
Trigger: GAGTACACGGGGGTGGAGGCAACAGAGGCACGCAGT...AAAGGAAAGCCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GGTTCATCATGCAGATCAGGGTGGCCTCAAGGTTGCAGACATCTACCTGCCTCTTTGTCTGCTGGCCACTaGTTCTTGTGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GSSCRSGWPQGCRHLPASLSAGH*FLCLLT
Trigger: AGTGAGGAGACACAAGAAGCAGTGGCCAGCAGACAA...AGAGGCAGGTAGATGTCTGCAACCTTGAGGCCACCCTGATCTGCATGATGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTAAGCACTCAGATGCTTTaGAAAATTCGGCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLSTQML*KIRPRA
Trigger: AGCTCTCGGCCGAATTTTCCAAAGCATCTGAGTGCT...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCAAACATGTGTTCAATGTaGCTAAGCTGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSNMCSM*LSWARV
Trigger: GACCCTGGCCCAGCTTAGCCACATTGAACACATGTT...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp GTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGGAGCCGGCACTTGCCTaGAAATGGATGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VFTQDKWNQNLTGESRFREPALA*KWMAPS
Trigger: TGAGGGGGCCATCCATTTCCAGGCAAGTGCCGGCTC...CCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp TCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTTGGGCAAAAGGGTACTaGCGGATGAATTTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLQLTRALFLCGLVQEPPWAKGY*RMNFKA
Trigger: TGCCTTAAAATTCATCCGCCAGTACCCTTTTGCCCA...AGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCTTAGCTTTAGGAAGCTaGTTTGTCTGCTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSLALGS*FVCWPL
Trigger: CAGTGGCCAGCAGACAAACCAGCTTCCTAAAGCTAA...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp TCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTAATCTTGATGTTCGATaGTGGACTTCTCCACATTGG +
Preference number: 4 (lower is better)
Translates to: SLQLTRALFLCGLVQEPPNLDVR*WTSPHW
Trigger: CCAATGTGGAGAAGTCCATCATCGAACATCAAGATT...AGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCAGTTCCTGCTCCATCTTaGTCAATACAGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHAVPAPS*SIQTPH
Trigger: GTGTGGAGTCTGTATTGATCAAGATGGAGCAGGAAC...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTGGGAGAGGCACCAAGTaGCCTTCACTCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: IYSSQGTSQTGCSHLASAGRGTK*PSLSFP
Trigger: TGGAAAGGAGAGTGAAGGTCACTTGGTGCCTCTCCC...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp GATTTGCCAAAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGTTTAGACCAGGGGTTTaGCCCCTGGCTGGCATAAGG +
Preference number: 4 (lower is better)
Translates to: DLPKERTVSRVSHCLGSRFRPGV*PLAGIR
Trigger: CCTTATGCCAGCCAGGGGGCAAACCCCTGGTCTAAA...CCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTTTGGCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp AAGCCCTCAGGAGGTAAGTGTCTGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGAGGTGGTGCACATATaGAAAGGCCCCTTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: KPSGGKCLPIFPGEVRGNEVVHI*KGPFLR
Trigger: TCTAAGGAAGGGGCCTTTGCATATGTGCACCACCTC...ATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTAGAGGGTACATTCTCTTaGTTTTCCATCCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLEGTFS*FSILSS
Trigger: GGATGACAGGATGGAAAAGCAAGAGAATGTACCCTC...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp CTCCAGCTCAGGCAACCATTTAGTCACACCAACCCTTCTCCCTCCCCATGCCCTTCATCGCCAAGTTCCTaGTCCATCTTGATCAATACA +
Preference number: 4 (lower is better)
Translates to: LQLRQPFSHTNPSPSPCPSSPSS*SILINT
Trigger: TGTATTGATCAAGATGGAGCAGGAACTTGGCGATGA...AGGGCATGGGGAGGGAGAAGGGTTGGTGTGACTAAATGGTTGCCTGAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp GACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGAGCGCTGTGGGGGAATaGTCACCACACTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DCCVYPRQMESESDWGVTSAVGE*SPHCPH
Trigger: ATGAGGACAGTGTGGTGAGCATTCCCCCACAGCGCT...CGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTAAAAAACCCTTGTCGTTaGCTTTCTTCTGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLKNPCR*LSSGSR
Trigger: CCGAGATCCAGAAGAAAGCCAACGACAAGGGTTTTT...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CTCCAGCTCAGGCAACCATTTAGTCACACCAACCCTTCTCCCTCCCCATGCCCTGGAGTCTATTTGGGATaGGATATTTTCCAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LQLRQPFSHTNPSPSPCPGVYLG*DIFQVA
Trigger: GGCAACTTGGAAAATATCCCATCCCAAATAGACTCC...AGGGCATGGGGAGGGAGAAGGGTTGGTGTGACTAAATGGTTGCCTGAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCTTCCAATACAGCAGCTaGAGTCTATTTGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSFQYSS*SLFGMG
Trigger: TCCCATCCCAAATAGACTCCAGCTGCTGTATTGGAA...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 72 bp GAATGTGACCCAAGAGTGACATGCTGCCAGCCATCTTaGGTTACTTGGCTTCCACAGGTTCCTTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: ECDPRVTCCQPS*VTWLPQVPSET
Trigger: GGTCTCAGAAGGAACCTGTGGAAGCCAAGTAACCAAAGATGGCTGGCAGCATGTCACTCTTGGGTCACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
3UTR CAA 72 bp AGAGAATTTGGCCAGGGCTCCCTGGGAGCTGGCCCATaGTTATTACTGTTGCCATGGTGTCAGTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: REFGQGSLGAGP*LLLLPWCQFAC
Trigger: ACAAGCAAACTGACACCATGGCAACAGTAATAACAATGGGCCAGCTCCCAGGGAGCCCTGGCCAAATTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTCTTGGAACTGCTGCATaGTTTTATGCTGGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPLGTAA*FYAGLR
Trigger: CCGCAGACCAGCATAAAATCATGCAGCAGTTCCAAG...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCATGCCTCAGCAAATCTTaGTGTTCGATGATGGACTTC +
Preference number: 4 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSCLSKS*CSMMDF
Trigger: GAAGTCCATCATCGAACATCAAGATTTGCTGAGGCA...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp AAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACAAGTGTCCTCCCACTaGGCAGGGAGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: KTAVFTQDKWNQNLTGESQVSSH*AGSRWL
Trigger: CAGCCATCTACTCCCTGCTCAGTGGGAGGACACTTG...TGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp CTCCAGCTCAGGCAACCATTTAGTCACACCAACCCTTCTCCCTCCCCATGCCCTGATTTTATGCTGGTCTaGGGAGATATAAGCCATACA +
Preference number: 4 (lower is better)
Translates to: LQLRQPFSHTNPSPSPCPDFMLV*GDISHT
Trigger: TGTATGGCTTATATCTCCGCAGACCAGCATAAAATC...AGGGCATGGGGAGGGAGAAGGGTTGGTGTGACTAAATGGTTGCCTGAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTAAGTTCCCCAGCGAATaGCTTCCTGTTGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPKFPSE*LPVAHL
Trigger: AAGATGGGCAACAGGAAGGCATTCGCTGGGGAACTT...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGCTTTCCTTTGGTTTGCCCCCTGGCTaGCATAAGGAAAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: KERTVSRVSHCLGSRLSFGLPPG*HKEREG
Trigger: TCCCTCTCTTTCCTTATGCCAGCCAGGGGGCAAACC...AAAGGAAAGCCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp ATCTTCCACAGTGACAGCCACAATCCTTTACACCATTGTGACTGGAATCAGAACATGGTAAGCAAGGGCTaGGGTCCCACCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IFHSDSHNPLHHCDWNQNMVSKG*GPTCSE
Trigger: CTCTGAGCAGGTGGGACCCCAGCCCTTGCTTACCAT...GTTCTGATTCCAGTCACAATGGTGTAAAGGATTGTGGCTGTCACTGTGGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCATCGTTGGCTTTCTTCTaGATCTCGGTTTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHASLAFF*ISVSVC
Trigger: ACACACAGAAACCGAGATCCAGAAGAAAGCCAACGA...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTCTCTGTCAATCTGACTaGTCAGGAGGTAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSLCQSD*SGGSTG
Trigger: ACCTGTGCTACCTCCTGACCAGTCAGATTGACAGAG...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTATTCTTCTACAGGCTTaGGAGGCAGCCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: IYSSQGTSQTGCSHLASAILLQA*EAACPD
Trigger: GTCAGGACAGGCTGCCTCCCAAGCCTGTAGAAGAAT...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp GTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGTTGCTACGGACTACATaGGGGCTCAATGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: VFTQDKWNQNLTGESRFRLLRTT*GLNGTV
Trigger: CACCGTGCCATTGAGCCCCCATGTAGTCCGTAGCAA...CCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCACATAGCAGCCATAGTTaGGAACAAAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHAHSSHS*EQRWTV
Trigger: CACTGTCCATCTTTGTTCCCAACTATGGCTGCTATG...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp GACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGAGCACAGGTCTCCTCTaGACATGTGTTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: DCCVYPRQMESESDWGVTSTGLL*TCVQCG
Trigger: GCCACATTGAACACATGTTCAGAGGAGACCTGTGCT...CGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTTGCTTTCCCCACTACTaGTGCTCCCTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPCFPHY*CSLSYP
Trigger: TGGATATGAAAGGGAGCATCAGTAGTGGGGAAAGCA...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp GACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGAAGTTCCCCAGCGAATaGCTTCCTGTTGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: DCCVYPRQMESESDWGVTKFPSE*LPVAHL
Trigger: AAGATGGGCAACAGGAAGGCATTCGCTGGGGAACTT...CGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGACTGCGTGCCTCTGTTaGCTCCACCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRTACLC*LHPRVL
Trigger: GAGTACACGGGGGTGGAGGCAACAGAGGCACGCAGT...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp AACGAAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGACTTGGGGGTCAAAACTaGGTGCCTCTGTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NEDCCVYPRQMESESDWGLGGQN*VPLLPP
Trigger: TGGAGGCAACAGAGGCACGCAGTTTTGACCCCCAAG...TCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGGCCTCACAAAGCCCCTaGCCTCCAGGTCGTACAAGG +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRASQSP*PPGRTR
Trigger: CCTTGTACGACCTGGAGGCCAGGGGCTTTGTGAGGC...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCAACGGTGAGGCTGGCCTaGCTGTCAGATTTCGACAAC +
Preference number: 4 (lower is better)
Translates to: KTAVFTQDKWNQNLTGESTVRLA*LSDFDN
Trigger: GTTGTCGAAATCTGACAGCCAGGCCAGCCTCACCGT...TGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGTACATGGGGGCTCAATaGCACGGTGAGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRYMGAQ*HGEAGL
Trigger: CAGGCCAGCCTCACCGTGCCATTGAGCCCCCATGTA...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AACACCACCCAACTATCTCAGACAAACCATGGCGGTGGCACAGGACACTGGTCCTTCATTAATGGCACTTaGGTAACTGGCCTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: NTTQLSQTNHGGGTGHWSFINGT*VTGLKV
Trigger: GACTTTAAGGCCAGTTACCCAAGTGCCATTAATGAA...GGACCAGTGTCCTGTGCCACCGCCATGGTTTGTCTGAGATAGTTGGGTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCACAGCTGGAGTCTATTTaGGATGGGATATTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: STVTAARLGQIYRRWEHAQLESI*DGIFSK
Trigger: CTTGGAAAATATCCCATCCCAAATAGACTCCAGCTG...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp GTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGCTTGGAACTGCTGCATaGTTTTATGCTGGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: VFTQDKWNQNLTGESRFRLGTAA*FYAGLR
Trigger: CCGCAGACCAGCATAAAATCATGCAGCAGTTCCAAG...CCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGATGTGCTGCCCCGCTTaGTCTGAGTGCGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRMCCPA*SECDGQ
Trigger: CTGACCATCGCACTCAGATCAAGCGGGGCAGCACAT...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTACACTTGGTGGACTTTaGTTTGATGAGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSTLGGL*FDEFGG
Trigger: ACCCCCAAACTCATCAAAGCAAAGTCCACCAAGTGT...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTTGTCCAGGTCCAGGATaGTTGTATAACGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: IYSSQGTSQTGCSHLASACPGPG*LYNGCN
Trigger: GTTACAGCCGTTATACAAGCATCCTGGACCTGGACA...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCGCCTCACAAAGCCCCTaGCCTCCAGGTCGTACAAGG +
Preference number: 4 (lower is better)
Translates to: NRTAEYKLLEFYIFHSDSASQSP*PPGRTR
Trigger: CCTTGTACGACCTGGAGGCCAGGGGCTTTGTGAGGC...GCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTTGGACTTCTCCACATTaGCCAGTTCATTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPWTSPH*PVHWLS
Trigger: AGAAAGCCAATGAACTGGCCAATGTGGAGAAGTCCA...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTAGTGTAGGCTGGGGTTaGGAGAGGCACCAAGTGACC +
Preference number: 4 (lower is better)
Translates to: QSTSYWSSISSTVTATILSVGWG*ERHQVT
Trigger: GGTCACTTGGTGCCTCTCCCAACCCCAGCCTACACT...AAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp GACTCCTCACTTTCAGAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTTCCAAGTTGCCCTCCTaGGTCTCATCCGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: DSSLSEQIEQQSTSYWSSSKLPS*VSSGSG
Trigger: ACCAGAACCGGATGAGACTCAGGAGGGCAACTTGGA...AGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTCTGAAAGTGAGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGTTTAGACCAGGGGTTTaGCCCCTGGCTGGCATAAGG +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRFRPGV*PLAGIR
Trigger: CCTTATGCCAGCCAGGGGGCAAACCCCTGGTCTAAA...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp GAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTAGGCTGGGGTCCCACCTaGTCAGAGAACTCGGAAATG +
Preference number: 4 (lower is better)
Translates to: EYKLLEFYIFHSDSHNPLGWGPT*SENSEM
Trigger: CATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAGCC...TAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGGAGAGCTCTTGGAACTaGTGCATGATTTTATGCTGG +
Preference number: 4 (lower is better)
Translates to: DCCVYPRQMESESDWGVTESSWN*CMILCW
Trigger: CCAGCATAAAATCATGCAGCAGTTCCAAGAGCTCTC...CGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp AAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACTCTGTCAATCTGACTaGTCAGGAGGTAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: KTAVFTQDKWNQNLTGESLCQSD*SGGSTG
Trigger: ACCTGTGCTACCTCCTGACCAGTCAGATTGACAGAG...TGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCACGGTGAGGCTGGCCTaGCTGTCAGATTTCGACAAC +
Preference number: 4 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFTVRLA*LSDFDN
Trigger: GTTGTCGAAATCTGACAGCCAGGCCAGCCTCACCGT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCTTGCTACGGACTACATaGGGGCTCAATGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFLLRTT*GLNGTV
Trigger: CACCGTGCCATTGAGCCCCCATGTAGTCCGTAGCAA...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACTCCGAAGTCCACGTaGAGCCCCTGGTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVTPKST*SPWSFC
Trigger: ACAGAAGGACCAGGGGCTCCACGTGGACTTCGGAGT...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp AAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGCTTTCCTTTAGTTGGGAACAAAGATaGACAGTGCAGTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: KERTVSRVSHCLGSRLSFSWEQR*TVQSPA
Trigger: AGCTGGTGACTGCACTGTCCATCTTTGTTCCCAACT...AAAGGAAAGCCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR CAA 72 bp CCCGTGATAAGAGAAGGCAACAGGATCAAGAGTGATTaGCCAAAGGAAAGAACAGTGAGTAGGGTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: PVIREGNRIKSD*PKERTVSRVSH
Trigger: GTGGCTAACCCTACTCACTGTTCTTTCCTTTGGCAAATCACTCTTGATCCTGTTGCCTTCTCTTATCACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp AAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGCTTTCCTTTTGCCTCAGCAAATCTTaGTGTTCGATGATGGACTTC +
Preference number: 4 (lower is better)
Translates to: KERTVSRVSHCLGSRLSFCLSKS*CSMMDF
Trigger: GAAGTCCATCATCGAACATCAAGATTTGCTGAGGCA...AAAGGAAAGCCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp CCACTTACATTCACAAGGAAATTAATTCTCCCAAACAGTTCTGACATGGAAGTGGGGAGAGGCACCAAGTaGCCTTCACTCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLTFTRKLILPNSSDMEVGRGTK*PSLSFP
Trigger: TGGAAAGGAGAGTGAAGGTCACTTGGTGCCTCTCCC...CACTTCCATGTCAGAACTGTTTGGGAGAATTAATTTCCTTGTGAATGTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp AAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGCTTTCCTTTACACTTGGTGGACTTTaGTTTGATGAGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KERTVSRVSHCLGSRLSFTLGGL*FDEFGG
Trigger: ACCCCCAAACTCATCAAAGCAAAGTCCACCAAGTGT...AAAGGAAAGCCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp AAGCCCTCAGGAGGTAAGTGTCTGCCAATCTTCCCAGGGGAAGTCAGAGGTAATTGGAAATCCATAATATaGAAAGGGGAAGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: KPSGGKCLPIFPGEVRGNWKSII*KGEEIQ
Trigger: CTGGATTTCTTCCCCTTTGCATATTATGGATTTCCA...ATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CTCAGGGCCTGGGTTCTATCGATAGAACCACTTACATTCACAAGGAAATTAATTATTCTTCTACAGGCTTaGGAGGCAGCCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LRAWVLSIEPLTFTRKLIILLQA*EAACPD
Trigger: GTCAGGACAGGCTGCCTCCCAAGCCTGTAGAAGAAT...AATTAATTTCCTTGTGAATGTAAGTGGTTCTATCGATAGAACCCAGGCCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCGCACTTGCCTGGAAATaGATGGCCCCCTCATTATCC +
Preference number: 4 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFALAWK*MAPSLS
Trigger: GGATAATGAGGGGGCCATCCATTTCCAGGCAAGTGC...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CTCAGGGCCTGGGTTCTATCGATAGAACCACTTACATTCACAAGGAAATTAATTGCACTTGCCTGGAAATaGATGGCCCCCTCATTATCC +
Preference number: 4 (lower is better)
Translates to: LRAWVLSIEPLTFTRKLIALAWK*MAPSLS
Trigger: GGATAATGAGGGGGCCATCCATTTCCAGGCAAGTGC...AATTAATTTCCTTGTGAATGTAAGTGGTTCTATCGATAGAACCCAGGCCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGCAGGGAGTAGATGGCTaGGTGGGCAAAAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVQGVDG*VGKRVL
Trigger: CAGTACCCTTTTGCCCACCCAGCCATCTACTCCCTG...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR CAA 72 bp ACACAAACTAGTGAAGGCAGTGCCATCTTTCTGGTTTaGTCACAGGCTCAGAAGCAAAATCCCATACCCTCT +
Preference number: 4 (lower is better)
Translates to: TQTSEGSAIFLV*SQAQKQNPIPS
Trigger: AGAGGGTATGGGATTTTGCTTCTGAGCCTGTGACAAAACCAGAAAGATGGCACTGCCTTCACTAGTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp AGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACAGGATGGCCTACGAATaGAGCCTGGTAATCCACCGA +
Preference number: 4 (lower is better)
Translates to: STSYWSSISSTVTATILYRMAYE*SLVIHR
Trigger: TCGGTGGATTACCAGGCTTCATTCGTAGGCCATCCT...GTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp AAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGGCATATAAATATAAGGGGCCAGGGTCTGAGTaGAATACTCAGTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: KWNQNLTGESRFRAYKYKGPGSE*NTQCHR
Trigger: TCTGTGACACTGAGTATTTCACTCAGACCCTGGCCC...CTTATATTTATATGCCCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGTACAAGGTGAGGTGGTaGACATATGCAAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRYKVRW*TYAKAP
Trigger: AGGGGCCTTTGCATATGTGCACCACCTCACCTTGTA...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp GTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGAGCTCTTGGAACTGCTaGATGATTTTATGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VFTQDKWNQNLTGESRFRSSWNC*MILCWS
Trigger: AGACCAGCATAAAATCATGCAGCAGTTCCAAGAGCT...CCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp AAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCAGAGGGTACATTCTCTTaGTTTTCCATCCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: KTAVFTQDKWNQNLTGESEGTFS*FSILSS
Trigger: GGATGACAGGATGGAAAAGCAAGAGAATGTACCCTC...TGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp CAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTAACATGTGTTCAATGTaGCTAAGCTGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QSTSYWSSISSTVTATILNMCSM*LSWARV
Trigger: GACCCTGGCCCAGCTTAGCCACATTGAACACATGTT...AAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTAGAGGAAATTCGTTATaGGCTGTTGTTTTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: IYSSQGTSQTGCSHLASARGNSL*AVVFEA
Trigger: TGCTTCGAAAACAACAGCCCATAACGAATTTCCTCT...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp AAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCATTCCAATACAGCAGCTaGAGTCTATTTGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: KTAVFTQDKWNQNLTGESFQYSS*SLFGMG
Trigger: TCCCATCCCAAATAGACTCCAGCTGCTGTATTGGAA...TGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp AGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACAGAAAGAGTGTAGGCTaGGGTTGGGAGAGGCACCAA +
Preference number: 4 (lower is better)
Translates to: STSYWSSISSTVTATILYRKSVG*GWERHQ
Trigger: TTGGTGCCTCTCCCAACCCCAGCCTACACTCTTTCT...GTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGAGTGCTTCACCGGCTTaGCATAGCAGCCATAGTTGG +
Preference number: 4 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVSASPA*HSSHSW
Trigger: CCAACTATGGCTGCTATGCCAAGCCGGTGAAGCACT...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp AGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACTACAAGGTGAGGTGGTaGACATATGCAAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: STSYWSSISSTVTATILYYKVRW*TYAKAP
Trigger: AGGGGCCTTTGCATATGTGCACCACCTCACCTTGTA...GTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGCGAATGCCTTCCTGTTaGCCATCTTCAAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVRMPSC*PSSSTQ
Trigger: CTGAGTGCTTGAAGATGGGCAACAGGAAGGCATTCG...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp AAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGGCATATAAATATAAGTCTGTATCACCAGGCTaGAAGTCAGGGATCTTCGTC +
Preference number: 4 (lower is better)
Translates to: KWNQNLTGESRFRAYKYKSVSPG*KSGIFV
Trigger: GACGAAGATCCCTGACTTGCAGCCTGGTGATACAGA...CTTATATTTATATGCCCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCAACAAAGATGGACAGTaGAGTCACCAGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFNKDGQ*SHQLPD
Trigger: GTCAGGAAGCTGGTGACTGCACTGTCCATCTTTGTT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp ACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACACCTCGGCCGAGAGCTCTTaGAACTGCTGCATGATTTTA +
Preference number: 4 (lower is better)
Translates to: TSYWSSISSTVTATILYTSAESS*NCCMIL
Trigger: TAAAATCATGCAGCAGTTCCAAGAGCTCTCGGCCGA...GGTGTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGATACAGACTCCACACTaGACTTGTAAGAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRIQTPH*TCKSQR
Trigger: GCGTTGGCTCTTACAAGTCCAGTGTGGAGTCTGTAT...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCAGTTGGGAACAAAGATaGACAGTGCAGTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFSWEQR*TVQSPA
Trigger: AGCTGGTGACTGCACTGTCCATCTTTGTTCCCAACT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR TCA 90 bp AATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCGTTCCTGCTCCATCTTaGTCAATACAGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: NRTAEYKLLEFYIFHSDSVPAPS*SIQTPH
Trigger: GTGTGGAGTCTGTATTGATCAAGATGGAGCAGGAAC...GCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp GAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTATGCTTTCCCCACTACTaGTGCTCCCTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: EYKLLEFYIFHSDSHNPLCFPHY*CSLSYP
Trigger: TGGATATGAAAGGGAGCATCAGTAGTGGGGAAAGCA...TAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR TCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGAAGGGTACTGGCGGATaGATTTTAAGGCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVKGTGG*ILRHSG
Trigger: GCCAGAATGCCTTAAAATTCATCCGCCAGTACCCTT...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTAAACAAAGATGGACAGTaGAGTCACCAGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: EYKLLEFYIFHSDSHNPLNKDGQ*SHQLPD
Trigger: GTCAGGAAGCTGGTGACTGCACTGTCCATCTTTGTT...TAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTAAGCACTCAGATGCTTTaGAAAATTCGGCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EYKLLEFYIFHSDSHNPLSTQML*KIRPRA
Trigger: AGCTCTCGGCCGAATTTTCCAAAGCATCTGAGTGCT...TAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp ACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACACCTGGACTTCTCCACATTaGCCAGTTCATTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSYWSSISSTVTATILYTWTSPH*PVHWLS
Trigger: AGAAAGCCAATGAACTGGCCAATGTGGAGAAGTCCA...GGTGTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp AGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACATACAGACTCCACACTaGACTTGTAAGAGCCAACGC +
Preference number: 4 (lower is better)
Translates to: STSYWSSISSTVTATILYIQTPH*TCKSQR
Trigger: GCGTTGGCTCTTACAAGTCCAGTGTGGAGTCTGTAT...GTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp ACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACACCCATAGCAGCCATAGTTaGGAACAAAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: TSYWSSISSTVTATILYTHSSHS*EQRWTV
Trigger: CACTGTCCATCTTTGTTCCCAACTATGGCTGCTATG...GGTGTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGAGCTCTTGGAACTGCTaGATGATTTTATGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GSLNSYFTKLARLGIELRSSWNC*MILCWS
Trigger: AGACCAGCATAAAATCATGCAGCAGTTCCAAGAGCT...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR GCA 90 bp CTCAGGGCCTGGGTTCTATCGATAGAACCACTTACATTCACAAGGAAATTAATTTCATCGCCAAGTTCCTaGTCCATCTTGATCAATACA +
Preference number: 4 (lower is better)
Translates to: LRAWVLSIEPLTFTRKLISSPSS*SILINT
Trigger: TGTATTGATCAAGATGGAGCAGGAACTTGGCGATGA...AATTAATTTCCTTGTGAATGTAAGTGGTTCTATCGATAGAACCCAGGCCCTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp ATCTTCCACAGTGACAGCCACAATCCTTTACACCATTGTGACTGGAATCAGAACTGGAAATCCATAATATaGAAAGGGGAAGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: IFHSDSHNPLHHCDWNQNWKSII*KGEEIQ
Trigger: CTGGATTTCTTCCCCTTTGCATATTATGGATTTCCA...GTTCTGATTCCAGTCACAATGGTGTAAAGGATTGTGGCTGTCACTGTGGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp CCACTTACATTCACAAGGAAATTAATTCTCCCAAACAGTTCTGACATGGAAGTGTCGTTGGCTTTCTTCTaGATCTCGGTTTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PLTFTRKLILPNSSDMEVSLAFF*ISVSVC
Trigger: ACACACAGAAACCGAGATCCAGAAGAAAGCCAACGA...CACTTCCATGTCAGAACTGTTTGGGAGAATTAATTTCCTTGTGAATGTAAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAAAAACCCTTGTCGTTaGCTTTCTTCTGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: ANRTAEYKLLEFYIFHSDKNPCR*LSSGSR
Trigger: CCGAGATCCAGAAGAAAGCCAACGACAAGGGTTTTT...GTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACTGGGCAAAAGGGTACTaGCGGATGAATTTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ANRTAEYKLLEFYIFHSDWAKGY*RMNFKA
Trigger: TGCCTTAAAATTCATCCGCCAGTACCCTTTTGCCCA...GTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR GCA 90 bp GACTCCTCACTTTCAGAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTGATTTTATGCTGGTCTaGGGAGATATAAGCCATACA +
Preference number: 4 (lower is better)
Translates to: DSSLSEQIEQQSTSYWSSDFMLV*GDISHT
Trigger: TGTATGGCTTATATCTCCGCAGACCAGCATAAAATC...AGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTCTGAAAGTGAGGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp AAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGGCATATAAATATAAGGGAGTCTATTTGGGATaGGATATTTTCCAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KWNQNLTGESRFRAYKYKGVYLG*DIFQVA
Trigger: GGCAACTTGGAAAATATCCCATCCCAAATAGACTCC...CTTATATTTATATGCCCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GAGCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGCAGCTGGAGTCTATTTaGGATGGGATATTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: EQIEQQSTSYWSSISSTVQLESI*DGIFSK
Trigger: CTTGGAAAATATCCCATCCCAAATAGACTCCAGCTG...CACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCATCCAGCTCATAAGCTaGGAACATTTCACAACTGTT +
Preference number: 4 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFIQLIS*EHFTTV
Trigger: AACAGTTGTGAAATGTTCCCAGCTTATGAGCTGGAT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp ACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACACCATCCAGCTCATAAGCTaGGAACATTTCACAACTGTT +
Preference number: 4 (lower is better)
Translates to: TSYWSSISSTVTATILYTIQLIS*EHFTTV
Trigger: AACAGTTGTGAAATGTTCCCAGCTTATGAGCTGGAT...GGTGTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR CAA 72 bp TCCTCATATTATTTATTTGGCATTTATTCTAAGCTTTaGCGCACAATGCCTGTGGGACATGATCACATCCGC +
Preference number: 4 (lower is better)
Translates to: SSYYLFGIYSKL*RTMPVGHDHIR
Trigger: GCGGATGTGATCATGTCCCACAGGCATTGTGCGCAAAAGCTTAGAATAAATGCCAAATAAATAATATGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CCA 90 bp GCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGAGGAAATTCGTTATaGGCTGTTGTTTTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: ANRTAEYKLLEFYIFHSDRGNSL*AVVFEA
Trigger: TGCTTCGAAAACAACAGCCCATAACGAATTTCCTCT...GTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CCA 90 bp GAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTATTCATTAATGGCACTTaGGTAACTGGCCTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: EYKLLEFYIFHSDSHNPLFINGT*VTGLKV
Trigger: GACTTTAAGGCCAGTTACCCAAGTGCCATTAATGAA...TAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
3UTR CAA 72 bp ACTTTCAGAGCAAATAGAACAGCAGAGTACAAGTTATaGGAGTTCTATATCTTCCACAGTGACAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: TFRANRTAEYKL*EFYIFHSDSHN
Trigger: ATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGCTCTGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS CCA 90 bp TTGCTACGGACTACATGGGGGCTCAATGGCACGGTGAGGCTGGCCTaGCTGTCAGATTTCGACAACACAGAGGCTGACTTCTCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LLRTTWGLNGTVRLA*LSDFDNTEADFSVP
Trigger: GGGCACCGAGAAGTCAGCCTCTGTGTTGTCGAAATCTGACAGCCAGGCCAGCCTCACCGTGCCATTGAGCCCCCATGTAGTCCGTAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 90 bp GCTGGGGACGTAGTCAAACCTGAGCAGTGGGTGGGTGGTCCCCGGTaGCTCCTGCATATAGTGCAGTTTCAACAGCTCAGCCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: AGDVVKPEQWVGGPR*LLHIVQFQQLSQVL
Trigger: CAGTACCTGGCTGAGCTGTTGAAACTGCACTATATGCAGGAGTCACCGGGGACCACCCACCCACTGCTCAGGTTTGACTACGTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS GCA 90 bp GGCCTCACAAAGCCCCTGGCCTCCAGGTCGTACAAGGTGAGGTGGTaGACATATGCAAAGGCCCCTTCCTTAGAGTCTCCCAGTACCACT +
Preference number: 5 (lower is better)
Translates to: GLTKPLASRSYKVRW*TYAKAPSLESPSTT
Trigger: AGTGGTACTGGGAGACTCTAAGGAAGGGGCCTTTGCATATGTGCACCACCTCACCTTGTACGACCTGGAGGCCAGGGGCTTTGTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp TGTCCTGTGGCTGACCGCTTTGCTACGGACTACATGGGGGCTCAATaGCACGGTGAGGCTGGCCTGGCTGTCAGATTTCGACAACACAGA +
Preference number: 5 (lower is better)
Translates to: CPVADRFATDYMGAQ*HGEAGLAVRFRQHR
Trigger: TCTGTGTTGTCGAAATCTGACAGCCAGGCCAGCCTCACCGTGCCATTGAGCCCCCATGTAGTCCGTAGCAAAGCGGTCAGCCACAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTAGGACAGCGTAGGGTCTaGCTGTCCAGGTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLGQRRV*LSRSRM
Trigger: CATCCTGGACCTGGACAGCAAGACCCTACGCTGTCC...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS TCA 90 bp CACGGTGAGGCTGGCCTGGCTGTCAGATTTCGACAACACAGAGGCTaGCTTCTCGGTGCCCAGCACCTCAATGCTTTCCCCACTACTGAT +
Preference number: 5 (lower is better)
Translates to: HGEAGLAVRFRQHRG*LLGAQHLNAFPTTD
Trigger: ATCAGTAGTGGGGAAAGCATTGAGGTGCTGGGCACCGAGAAGTCAGCCTCTGTGTTGTCGAAATCTGACAGCCAGGCCAGCCTCACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 90 bp CCCTGTATAGGGGACAGCGTAGGGTCTTGCTGTCCAGGTCCAGGATaGTTGTATAACGGCTGTAACGGCTCAGGGTATGGAGGGTACCCA +
Preference number: 5 (lower is better)
Translates to: PCIGDSVGSCCPGPG*LYNGCNGSGYGGYP
Trigger: TGGGTACCCTCCATACCCTGAGCCGTTACAGCCGTTATACAAGCATCCTGGACCTGGACAGCAAGACCCTACGCTGTCCCCTATACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS GCA 90 bp CCTCGTTCACGAGCCCCAGGTTTAGCTTTAGGAAGCTGGTTTGTCTaGTGGCCACTGCTTCTTGTGTCTCCTCACTGTGGGCGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: PRSRAPGLALGSWFV*WPLLLVSPHCGRAD
Trigger: ATCTGCCCGCCCACAGTGAGGAGACACAAGAAGCAGTGGCCAGCAGACAAACCAGCTTCCTAAAGCTAAACCTGGGGCTCGTGAACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS CCA 90 bp TCCGAAGTCCACGTGGAGCCCCTGGTCCTTCTGTATGTAGCGCTGTaGGGGAATGCTCACCACACTGTCCTCATCAGAAAGAGTGTAGGC +
Preference number: 5 (lower is better)
Translates to: SEVHVEPLVLLYVAL*GNAHHTVLIRKSVG
Trigger: GCCTACACTCTTTCTGATGAGGACAGTGTGGTGAGCATTCCCCCACAGCGCTACATACAGAAGGACCAGGGGCTCCACGTGGACTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp CGTTCACGAGCCCCAGGTTTAGCTTTAGGAAGCTGGTTTGTCTGCTaGCCACTGCTTCTTGTGTCTCCTCACTGTGGGCGGGCAGATGCA +
Preference number: 5 (lower is better)
Translates to: RSRAPGLALGSWFVC*PLLLVSPHCGRADA
Trigger: TGCATCTGCCCGCCCACAGTGAGGAGACACAAGAAGCAGTGGCCAGCAGACAAACCAGCTTCCTAAAGCTAAACCTGGGGCTCGTGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp GGTTCATCATGCAGATCAGGGTGGCCTCAAGGTTGCAGACATCTACCTGCCTCTAACTGCGTGCCTCTGTaGCCTCCACCCCCGTGTACT +
Preference number: 5 (lower is better)
Translates to: GSSCRSGWPQGCRHLPASNCVPL*PPPPCT
Trigger: AGTACACGGGGGTGGAGGCAACAGAGGCACGCAGTT...AGAGGCAGGTAGATGTCTGCAACCTTGAGGCCACCCTGATCTGCATGATGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp AGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTATCAGGCTCTGTGGCTGACCGCTTaGCTACGGACTACATGGGGG +
Preference number: 5 (lower is better)
Translates to: RALFLCGLVQEPPLGYQALWLTA*LRTTWG
Trigger: CCCCCATGTAGTCCGTAGCAAAGCGGTCAGCCACAG...AGCCTGATAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS TCA 90 bp AGACCAGGGGTTTGCCCCCTGGCTGGCATAAGGAAAGAGAGGGACTaGGTACTCCTCAGGCAAAGCGGGCTCATTGTAAGGTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RPGVCPLAGIRKERD*VLLRQSGLIVRFFL
Trigger: GAGGAAGAACCTTACAATGAGCCCGCTTTGCCTGAGGAGTACTCAGTCCCTCTCTTTCCTTATGCCAGCCAGGGGGCAAACCCCTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 90 bp TGGGATATTTTCCAAGTTGCCCTCCTGAGTCTCATCCGGTTCTGGTaGGCCGGCACTTGCCTGGAAATGGATGGCCCCCTCATTATCCGC +
Preference number: 5 (lower is better)
Translates to: WDIFQVALLSLIRFW*AGTCLEMDGPLIIR
Trigger: GCGGATAATGAGGGGGCCATCCATTTCCAGGCAAGTGCCGGCTCACCAGAACCGGATGAGACTCAGGAGGGCAACTTGGAAAATATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp GGGCAGGTACTTAAGACTTCAATGCTGTCCTCGCTGATTGTCCTGTaGCTGACCGCTTTGCTACGGACTACATGGGGGCTCAATGGCACG +
Preference number: 5 (lower is better)
Translates to: GQVLKTSMLSSLIVL*LTALLRTTWGLNGT
Trigger: CGTGCCATTGAGCCCCCATGTAGTCCGTAGCAAAGCGGTCAGCCACAGGACAATCAGCGAGGACAGCATTGAAGTCTTAAGTACCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCATGGAGGGTACCCACATaGGCAGGAGAGGCCACTCTT +
Preference number: 5 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSWRVPT*AGEATL
Trigger: AAGAGTGGCCTCTCCTGCCAATGTGGGTACCCTCCA...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS GCA 90 bp AAAGCCCCTGGCCTCCAGGTCGTACAAGGTGAGGTGGTGCACATATaGAAAGGCCCCTTCCTTAGAGTCTCCCAGTACCACTTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: KAPGLQVVQGEVVHI*KGPFLRVSQYHFRV
Trigger: GACTCTAAAGTGGTACTGGGAGACTCTAAGGAAGGGGCCTTTGCATATGTGCACCACCTCACCTTGTACGACCTGGAGGCCAGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 90 bp TTAGCGGACTCCTCAGGATTAGAGGTAGTGGATACCTGGTCAGCCTaGTCCTGGGTATGCTCTGTATCACCAGGCTGCAAGTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: LADSSGLEVVDTWSA*SWVCSVSPGCKSGI
Trigger: GATCCCTGACTTGCAGCCTGGTGATACAGAGCATACCCAGGATCAGGCTGACCAGGTATCCACTACCTCTAATCCTGAGGAGTCCGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 90 bp CAGCTGGAGTCTATTTGGGATGGGATATTTTCCAAGTTGCCCTCCTaGGTCTCATCCGGTTCTGGTGAGCCGGCACTTGCCTGGAAATGG +
Preference number: 5 (lower is better)
Translates to: QLESIWDGIFSKLPS*VSSGSGEPALAWKW
Trigger: CCATTTCCAGGCAAGTGCCGGCTCACCAGAACCGGATGAGACTCAGGAGGGCAACTTGGAAAATATCCCATCCCAAATAGACTCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 90 bp ACTTTGGTGTCATTGGGGATGGTAAGCAAGGGCTGGGGTCCCACCTaGTCAGAGAACTCGGAAATGAGGATGAAGTCCCTGGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: TLVSLGMVSKGWGPT*SENSEMRMKSLENL
Trigger: CAAGTTCTCCAGGGACTTCATCCTCATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAGCCCTTGCTTACCATCCCCAATGACACCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 90 bp CACCGGCTTGGCATAGCAGCCATAGTTGGGAACAAAGATGGACAGTaGAGTCACCAGCTTCCTGACAATGGTTTCATCTTCGCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: HRLGIAAIVGNKDGQ*SHQLPDNGFIFAQD
Trigger: GTCCTGGGCGAAGATGAAACCATTGTCAGGAAGCTGGTGACTGCACTGTCCATCTTTGTTCCCAACTATGGCTGCTATGCCAAGCCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CTCCAGCTCAGGCAACCATTTAGTCACACCAACCCTTCTCCCTCCCCATGCCCTAAAACTTTGGTGTCATaGGGGATGGTAAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LQLRQPFSHTNPSPSPCPKTLVS*GMVSKG
Trigger: GCCCTTGCTTACCATCCCCAATGACACCAAAGTTTT...AGGGCATGGGGAGGGAGAAGGGTTGGTGTGACTAAATGGTTGCCTGAGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp GATTTGCCAAAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGAACTGCGTGCCTCTGTaGCCTCCACCCCCGTGTACT +
Preference number: 5 (lower is better)
Translates to: DLPKERTVSRVSHCLGSRNCVPL*PPPPCT
Trigger: AGTACACGGGGGTGGAGGCAACAGAGGCACGCAGTT...CCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTTTGGCAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp ATCTACAGCTCCCAAGGTACTTCTCAAACTGGCTGTAGCCATTTGGCATCTGCTGAGTGTAGGCTGGGGTaGGGAGAGGCACCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: IYSSQGTSQTGCSHLASAECRLG*GEAPSD
Trigger: GTCACTTGGTGCCTCTCCCAACCCCAGCCTACACTC...AGCAGATGCCAAATGGCTACAGCCAGTTTGAGAAGTACCTTGGGAGCTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp AAGCCCTCAGGAGGTAAGTGTCTGCCAATCTTCCCAGGGGAAGTCAGAGGTAATCCAGGTCCAGGATGCTaGTATAACGGCTGTAACGGC +
Preference number: 5 (lower is better)
Translates to: KPSGGKCLPIFPGEVRGNPGPGC*YNGCNG
Trigger: GCCGTTACAGCCGTTATACAAGCATCCTGGACCTGG...ATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS TCA 90 bp AGCCATAGTTGGGAACAAAGATGGACAGTGCAGTCACCAGCTTCCTaGCAATGGTTTCATCTTCGCCCAGGACCACAAGTGTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SHSWEQRWTVQSPAS*QWFHLRPGPQVSSH
Trigger: GTGGGAGGACACTTGTGGTCCTGGGCGAAGATGAAACCATTGTCAGGAAGCTGGTGACTGCACTGTCCATCTTTGTTCCCAACTATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 90 bp CAATACAGCAGCTGGAGTCTATTTGGGATGGGATATTTTCCAAGTTaGCCTCCTGAGTCTCATCCGGTTCTGGTGAGCCGGCACTTGCCT +
Preference number: 5 (lower is better)
Translates to: QYSSWSLFGMGYFPS*PPESHPVLVSRHLP
Trigger: AGGCAAGTGCCGGCTCACCAGAACCGGATGAGACTCAGGAGGGCAACTTGGAAAATATCCCATCCCAAATAGACTCCAGCTGCTGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CTCCAGCTCAGGCAACCATTTAGTCACACCAACCCTTCTCCCTCCCCATGCCCTCTGCCTCAGCAAATCTaGATGTTCGATGATGGACTT +
Preference number: 5 (lower is better)
Translates to: LQLRQPFSHTNPSPSPCPLPQQI*MFDDGL
Trigger: AAGTCCATCATCGAACATCAAGATTTGCTGAGGCAG...AGGGCATGGGGAGGGAGAAGGGTTGGTGTGACTAAATGGTTGCCTGAGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp CCCCAGTTAGGGCCCTGTGAGATGCTCTTTTTCCACTGCTACATCTTTGTTCCTGTAGTCCAGGTTCTCTaGGGGGTCAAAACTGCGTGC +
Preference number: 5 (lower is better)
Translates to: PQLGPCEMLFFHCYIFVPVVQVL*GVKTAC
Trigger: GCACGCAGTTTTGACCCCCAAGAGAACCTGGACTAC...AGGAACAAAGATGTAGCAGTGGAAAAAGAGCATCTCACAGGGCCCTAACTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp TCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTGCAGCTGGAGTCTATTaGGGATGGGATATTTTCCAA +
Preference number: 5 (lower is better)
Translates to: SLQLTRALFLCGLVQEPPAAGVY*GWDIFQ
Trigger: TTGGAAAATATCCCATCCCAAATAGACTCCAGCTGC...AGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS TCA 90 bp AGGCTGACTTCTCGGTGCCCAGCACCTCAATGCTTTCCCCACTACTaGTGCTCCCTTTCATATCCATATCCAGGTAGTCCAGGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: RLTSRCPAPQCFPHY*CSLSYPYPGSPGSL
Trigger: AAGAGAACCTGGACTACCTGGATATGGATATGAAAGGGAGCATCAGTAGTGGGGAAAGCATTGAGGTGCTGGGCACCGAGAAGTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 90 bp GCATATAGTGCAGTTTCAACAGCTCAGCCAGGTACTGTACCACTCTaGTGTCCTCGTTCACGAGCCCCAGGTTTAGCTTTAGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: AYSAVSTAQPGTVPL*CPRSRAPGLALGSW
Trigger: CCAGCTTCCTAAAGCTAAACCTGGGGCTCGTGAACGAGGACATCAGAGTGGTACAGTACCTGGCTGAGCTGTTGAAACTGCACTATATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS GCA 90 bp TTCCCCAGCGAATGCCTTCCTGTTGCCCATCTTCAAGCACTCAGATaGTTTGGAAAATTCGGCCGAGAGCTCTTGGAACTGCTGCATGAT +
Preference number: 5 (lower is better)
Translates to: FPSECLPVAHLQALR*FGKFGRELLELLHD
Trigger: ATCATGCAGCAGTTCCAAGAGCTCTCGGCCGAATTTTCCAAAGCATCTGAGTGCTTGAAGATGGGCAACAGGAAGGCATTCGCTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp AAAGTGCCAAAAACTTTGGTGTCATTGGGGATGGTAAGCAAGGGCTaGGGTCCCACCTGCTCAGAGAACTCGGAAATGAGGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: KVPKTLVSLGMVSKG*GPTCSENSEMRMKS
Trigger: GGACTTCATCCTCATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAGCCCTTGCTTACCATCCCCAATGACACCAAAGTTTTTGGCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp AATGCTCACCACACTGTCCTCATCAGAAAGAGTGTAGGCTGGGGTTaGGAGAGGCACCAAGTGACCTTCACTCTCCTTTCCAATACAGCA +
Preference number: 5 (lower is better)
Translates to: NAHHTVLIRKSVGWG*ERHQVTFTLLSNTA
Trigger: TGCTGTATTGGAAAGGAGAGTGAAGGTCACTTGGTGCCTCTCCCAACCCCAGCCTACACTCTTTCTGATGAGGACAGTGTGGTGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp AACATCTCGGCTAGCCAGAAGGCAGCTTGGATCCAGCTCATAAGCTaGGAACATTTCACAACTGTTGTCTCGGGGAGAAGGGTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: NISASQKAAWIQLIS*EHFTTVVSGRRVSV
Trigger: AACACTGACCCTTCTCCCCGAGACAACAGTTGTGAAATGTTCCCAGCTTATGAGCTGGATCCAAGCTGCCTTCTGGCTAGCCGAGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp AAGCCCTCAGGAGGTAAGTGTCTGCCAATCTTCCCAGGGGAAGTCAGAGGTAATTTCGGCCGAGAGCTCTaGGAACTGCTGCATGATTTT +
Preference number: 5 (lower is better)
Translates to: KPSGGKCLPIFPGEVRGNFGREL*ELLHDF
Trigger: AAAATCATGCAGCAGTTCCAAGAGCTCTCGGCCGAA...ATTACCTCTGACTTCCCCTGGGAAGATTGGCAGACACTTACCTCCTGAGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp TCTCTGCAGCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTTGTGTAGCACTGTCCTaGTGTAATCCAAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SLQLTRALFLCGLVQEPPCVALS*CNPSLS
Trigger: TGAAAGACTTGGATTACACAAGGACAGTGCTACACA...AGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGCTGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp GCTGACCAGAGCACTGTTCCTCTGTGGCCTTGTTCAGGAGCCTCCTCTTGGTTAATTCGTTATGGGCTGTaGTTTTCGAAGCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: ADQSTVPLWPCSGASSWLIRYGL*FSKHSV
Trigger: GACAGAGTGCTTCGAAAACAACAGCCCATAACGAAT...TAACCAAGAGGAGGCTCCTGAACAAGGCCACAGAGGAACAGTGCTCTGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCAAACATTTCACAACTGTaGTCTCGGGGAGAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: STVTAARLGQIYRRWEHANISQL*SRGEGS
Trigger: TGACCCTTCTCCCCGAGACAACAGTTGTGAAATGTT...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTTGGCCAGCTCTCTTTTaGTGCCTCTCAGAGGATAGG +
Preference number: 5 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSWPALF*CLSEDR
Trigger: CCTATCCTCTGAGAGGCACAAAAAGAGAGCTGGCCA...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS TCA 90 bp ATCACCAGGCTGCAAGTCAGGGATCTTCGTCTTCTGACGAGGGTATaGGCGGATCTGCCTCAGCAAATCTTGATGTTCGATGATGGACTT +
Preference number: 5 (lower is better)
Translates to: ITRLQVRDLRLLTRV*ADLPQQILMFDDGL
Trigger: AAGTCCATCATCGAACATCAAGATTTGCTGAGGCAGATCCGCTCATACCCTCGTCAGAAGACGAAGATCCCTGACTTGCAGCCTGGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 90 bp TTTGATGAGTTTGGGGGTGTAAGCCGGTCTGCAGGTATAAAGGTCTaGATTAGCGGACTCCTCAGGATTAGAGGTAGTGGATACCTGGTC +
Preference number: 5 (lower is better)
Translates to: FDEFGGVSRSAGIKV*ISGLLRIRGSGYLV
Trigger: GACCAGGTATCCACTACCTCTAATCCTGAGGAGTCCGCTAATGCAGACCTTTATACCTGCAGACCGGCTTACACCCCCAAACTCATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp GGCCCCCTCATTATCCGCATAGGCTTCTTCTTCATTAATGGCACTTaGGTAACTGGCCTTAAAGTCATCAGGAATGAGGGCCTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GPLIIRIGFFFINGT*VTGLKVIRNEGLRR
Trigger: CCTTCTGAGGCCCTCATTCCTGATGACTTTAAGGCCAGTTACCCAAGTGCCATTAATGAAGAAGAAGCCTATGCGGATAATGAGGGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp TGCCAATCTTCCCAGGGGAAGTCAGAGGTAATGCTCTGGATAAGAGGATCCAGTAAGCACTCAGATGCTTaGGAAAATTCGGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: CQSSQGKSEVMLWIRGSSKHSDA*ENSAES
Trigger: GCTCTCGGCCGAATTTTCCAAAGCATCTGAGTGCTT...ACTGGATCCTCTTATCCAGAGCATTACCTCTGACTTCCCCTGGGAAGATTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp AGTACTGTGACTGCAGCACGGCTGGGACAGATTTACAGACGGTGGGAACATGCAAGTTCCTGCTCCATCTaGATCAATACAGACTCCACA +
Preference number: 5 (lower is better)
Translates to: STVTAARLGQIYRRWEHASSCSI*INTDST
Trigger: TGTGGAGTCTGTATTGATCAAGATGGAGCAGGAACT...TGCATGTTCCCACCGTCTGTAAATCTGTCCCAGCCGTGCTGCAGTCACAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp AAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGCTTTCCTTTGTAGTCCAGGTTCTCTaGGGGGTCAAAACTGCGTGC +
Preference number: 5 (lower is better)
Translates to: KERTVSRVSHCLGSRLSFVVQVL*GVKTAC
Trigger: GCACGCAGTTTTGACCCCCAAGAGAACCTGGACTAC...AAAGGAAAGCCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS TCA 90 bp GACGAGGGTATGAGCGGATCTGCCTCAGCAAATCTTGATGTTCGATaGTGGACTTCTCCACATTGGCCAGTTCATTGGCTTTCTCAATCG +
Preference number: 5 (lower is better)
Translates to: DEGMSGSASANLDVR*WTSPHWPVHWLSQS
Trigger: CGATTGAGAAAGCCAATGAACTGGCCAATGTGGAGAAGTCCATCATCGAACATCAAGATTTGCTGAGGCAGATCCGCTCATACCCTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 90 bp TCTCCTCTGAACATGTGTTCAATGTGGCTAAGCTGGGCCAGGGTCTaGGTGAAATACTCAGTGTCACAGAGTTCCTCCAAGGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: SPLNMCSMWLSWARV*VKYSVSQSSSKVFN
Trigger: GTTGAAGACCTTGGAGGAACTCTGTGACACTGAGTATTTCACTCAGACCCTGGCCCAGCTTAGCCACATTGAACACATGTTCAGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp ACCTTCACTCTCCTTTCCAATACAGCAGCTGGAGTCTATTTGGGATaGGATATTTTCCAAGTTGCCCTCCTGAGTCTCATCCGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: TFTLLSNTAAGVYLG*DIFQVALLSLIRFW
Trigger: CCAGAACCGGATGAGACTCAGGAGGGCAACTTGGAAAATATCCCATCCCAAATAGACTCCAGCTGCTGTATTGGAAAGGAGAGTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp ATCCAGGCTCATCTTACTAACATCTCGGCTAGCCAGAAGGCAGCTTaGATCCAGCTCATAAGCTGGGAACATTTCACAACTGTTGTCTCG +
Preference number: 5 (lower is better)
Translates to: IQAHLTNISASQKAA*IQLISWEHFTTVVS
Trigger: CGAGACAACAGTTGTGAAATGTTCCCAGCTTATGAGCTGGATCCAAGCTGCCTTCTGGCTAGCCGAGATGTTAGTAAGATGAGCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 90 bp AAAGTTCAACTTGGGGTAGGCAGAACCGGGAGGATGGCCTACGAATaGAGCCTGGTAATCCACCGACATAATCCGCAAAGAGAAGTAATT +
Preference number: 5 (lower is better)
Translates to: KVQLGVGRTGRMAYE*SLVIHRHNPQREVI
Trigger: AATTACTTCTCTTTGCGGATTATGTCGGTGGATTACCAGGCTTCATTCGTAGGCCATCCTCCCGGTTCTGCCTACCCCAAGTTGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp GTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGTTCGGCCGAGAGCTCTaGGAACTGCTGCATGATTTT +
Preference number: 5 (lower is better)
Translates to: VFTQDKWNQNLTGESRFRFGREL*ELLHDF
Trigger: AAAATCATGCAGCAGTTCCAAGAGCTCTCGGCCGAA...CCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp AAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGCTTTCCTTTAAGCACTCAGATGCTTaGGAAAATTCGGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: KERTVSRVSHCLGSRLSFKHSDA*ENSAES
Trigger: GCTCTCGGCCGAATTTTCCAAAGCATCTGAGTGCTT...AAAGGAAAGCCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CAGAAGGCCAGGCATGGCTGCTGCCTTTCTCAATACAGGGGCACACAGTATTCATTCTTGTCAAAACACTaGGTGGACTTTGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: QKARHGCCLSQYRGTQYSFLSKH*VDFALM
Trigger: CATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAA...TGAATACTGTGTGCCCCTGTATTGAGAAAGGCAGCAGCCATGCCTGGCCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp CCACTTACATTCACAAGGAAATTAATTCTCCCAAACAGTTCTGACATGGAAGTGCTGTGGCTGACCGCTTaGCTACGGACTACATGGGGG +
Preference number: 5 (lower is better)
Translates to: PLTFTRKLILPNSSDMEVLWLTA*LRTTWG
Trigger: CCCCCATGTAGTCCGTAGCAAAGCGGTCAGCCACAG...CACTTCCATGTCAGAACTGTTTGGGAGAATTAATTTCCTTGTGAATGTAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp GCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACGAGTGTAGGCTGGGGTaGGGAGAGGCACCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: ANRTAEYKLLEFYIFHSDECRLG*GEAPSD
Trigger: GTCACTTGGTGCCTCTCCCAACCCCAGCCTACACTC...GTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS CCA 90 bp TTGGCAGGAGAGGCCACTCTTTGTAGGCCAATAAGCTTCCACTTCTaGAAATCCATAATATGCAAAGGGGAAGAAATCCAGTGCTTCACC +
Preference number: 5 (lower is better)
Translates to: LAGEATLCRPISFHF*KSIICKGEEIQCFT
Trigger: GGTGAAGCACTGGATTTCTTCCCCTTTGCATATTATGGATTTCCAGAAGTGGAAGCTTATTGGCCTACAAAGAGTGGCCTCTCCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS GCA 90 bp TTCCTCCAAGGTCTTCAACTTCTTGTCAAAACACTTGGTGGACTTTaGTTTGATGAGTTTGGGGGTGTAAGCCGGTCTGCAGGTATAAAG +
Preference number: 5 (lower is better)
Translates to: FLQGLQLLVKTLGGL*FDEFGGVSRSAGIK
Trigger: CTTTATACCTGCAGACCGGCTTACACCCCCAAACTCATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTTGGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 90 bp CATTGGCTTTCTCAATCGCCTGAGAAGAATAAAAACCCTTGTCGTTaGCTTTCTTCTGGATCTCGGTTTCTGTGTGTAGCACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HWLSQSPEKNKNPCR*LSSGSRFLCVALSL
Trigger: CAAGGACAGTGCTACACACAGAAACCGAGATCCAGAAGAAAGCCAACGACAAGGGTTTTTATTCTTCTCAGGCGATTGAGAAAGCCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCAAGTCCCTGGAGAACTaGGCCCCAGACAGTTTAGAC +
Preference number: 5 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFKSLEN*APDSLD
Trigger: GTCTAAACTGTCTGGGGCCAAGTTCTCCAGGGACTT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp CTAAACCTGCTTCATCTCGTAATGTTTAGGGCTCTTCCCCACCTCCTGGAACCATTCTTGTCAAAACACTaGGTGGACTTTGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: LNLLHLVMFRALPHLLEPFLSKH*VDFALM
Trigger: CATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAA...TGGTTCCAGGAGGTGGGGAAGAGCCCTAAACATTACGAGATGAAGCAGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp GATTTGCCAAAGGAAAGAACAGTGAGTAGGGTTAGCCACTGTCTAGGAAGCAGGAAGGTCTTCAACTTCTaGTCAAAACACTTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: DLPKERTVSRVSHCLGSRKVFNF*SKHLVD
Trigger: GTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTT...CCTGCTTCCTAGACAGTGGCTAACCCTACTCACTGTTCTTTCCTTTGGCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp AAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGGCATATAAATATAAGAAGTCCCTGGAGAACTaGGCCCCAGACAGTTTAGAC +
Preference number: 5 (lower is better)
Translates to: KWNQNLTGESRFRAYKYKKSLEN*APDSLD
Trigger: GTCTAAACTGTCTGGGGCCAAGTTCTCCAGGGACTT...CTTATATTTATATGCCCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp AACGAAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAAGTTCCTGCTCCATCTaGATCAATACAGACTCCACA +
Preference number: 5 (lower is better)
Translates to: NEDCCVYPRQMESESDWGSSCSI*INTDST
Trigger: TGTGGAGTCTGTATTGATCAAGATGGAGCAGGAACT...TCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp AATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCTGGCCAGCTCTCTTTTaGTGCCTCTCAGAGGATAGG +
Preference number: 5 (lower is better)
Translates to: NRTAEYKLLEFYIFHSDSWPALF*CLSEDR
Trigger: CCTATCCTCTGAGAGGCACAAAAAGAGAGCTGGCCA...GCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS CCA 90 bp TCCTGTCATCCACCTCTACAAAATCTTCAAAGAGGAAATTCGTTATaGGCTGTTGTTTTCGAAGCACTCTGTCAATCTGACTGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: SCHPPLQNLQRGNSL*AVVFEALCQSDWSG
Trigger: TCCTGACCAGTCAGATTGACAGAGTGCTTCGAAAACAACAGCCCATAACGAATTTCCTCTTTGAAGATTTTGTAGAGGTGGATGACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp ACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACACCAAAACTTTGGTGTCATaGGGGATGGTAAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: TSYWSSISSTVTATILYTKTLVS*GMVSKG
Trigger: GCCCTTGCTTACCATCCCCAATGACACCAAAGTTTT...GGTGTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp AAGACTGCTGTGTTTACCCAAGACAAATGGAATCAGAATCTGACTGGGGAGTCATGTGTAGCACTGTCCTaGTGTAATCCAAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: KTAVFTQDKWNQNLTGESCVALS*CNPSLS
Trigger: TGAAAGACTTGGATTACACAAGGACAGTGCTACACA...TGACTCCCCAGTCAGATTCTGATTCCATTTGTCTTGGGTAAACACAGCAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp GGTAGCCTTAATAGTTATTTTACTAAATTAGCCAGGCTAGGGATAGAGCTCAGGATGGACTTCTCCACATaGGCCAGTTCATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GSLNSYFTKLARLGIELRMDFST*ASSLAF
Trigger: GAAAGCCAATGAACTGGCCAATGTGGAGAAGTCCAT...CCTGAGCTCTATCCCTAGCCTGGCTAATTTAGTAAAATAACTATTAAGGCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp AGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTACATGGACTTCTCCACATaGGCCAGTTCATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: STSYWSSISSTVTATILYMDFST*ASSLAF
Trigger: GAAAGCCAATGAACTGGCCAATGTGGAGAAGTCCAT...GTAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CTCAGGGCCTGGGTTCTATCGATAGAACCACTTACATTCACAAGGAAATTAATTATTCGTTATGGGCTGTaGTTTTCGAAGCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: LRAWVLSIEPLTFTRKLIIRYGL*FSKHSV
Trigger: GACAGAGTGCTTCGAAAACAACAGCCCATAACGAAT...AATTAATTTCCTTGTGAATGTAAGTGGTTCTATCGATAGAACCCAGGCCCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp GAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACAGCCACAATCCTTTAAACATTTCACAACTGTaGTCTCGGGGAGAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: EYKLLEFYIFHSDSHNPLNISQL*SRGEGS
Trigger: TGACCCTTCTCCCCGAGACAACAGTTGTGAAATGTT...TAAAGGATTGTGGCTGTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCAAAGTGCCAAAAACTTaGGTGTCATTGGGGATGGTA +
Preference number: 5 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFKVPKT*VSLGMV
Trigger: TACCATCCCCAATGACACCAAAGTTTTTGGCACTTT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp AAATGGAATCAGAATCTGACTGGGGAGTCACGATTCAGGGCATATAAATATAAGCTGCCTCAGCAAATCTaGATGTTCGATGATGGACTT +
Preference number: 5 (lower is better)
Translates to: KWNQNLTGESRFRAYKYKLPQQI*MFDDGL
Trigger: AAGTCCATCATCGAACATCAAGATTTGCTGAGGCAG...CTTATATTTATATGCCCTGAATCGTGACTCCCCAGTCAGATTCTGATTCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS-3UTR CAA 90 bp CAAACAACTATAATTCTAGCAGTTGCAATGTCAAGGCAGAAGGGTCAAGAGTTCAAGGTCTTCAACTTCTaGTCAAAACACTTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: QTTIILAVAMSRQKGQEFKVFNF*SKHLVD
Trigger: GTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTT...GAACTCTTGACCCTTCTGCCTTGACATTGCAACTGCTAGAATTATAGTTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS-3UTR CAA 90 bp GCAAATAGAACAGCAGAGTACAAGTTATTGGAGTTCTATATCTTCCACAGTGACGCAGCTGGAGTCTATTaGGGATGGGATATTTTCCAA +
Preference number: 5 (lower is better)
Translates to: ANRTAEYKLLEFYIFHSDAAGVY*GWDIFQ
Trigger: TTGGAAAATATCCCATCCCAAATAGACTCCAGCTGC...GTCACTGTGGAAGATATAGAACTCCAATAACTTGTACTCTGCTGTTCTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102667.5
CDS TCA 72 bp TTCCAAGTTGCCCTCCTGAGTCTCATCCGGTTCTGGTaGGCCGGCACTTGCCTGGAAATGGATGGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: FQVALLSLIRFW*AGTCLEMDGPL
Trigger: GAGGGGGCCATCCATTTCCAGGCAAGTGCCGGCTCACCAGAACCGGATGAGACTCAGGAGGGCAACTTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp TGCTCTGGACGTGAAGGTAGTATGTGCTGCCCCGCTTaGTCTGAGTGCGATGGTCAGCCAGGCGGGGTACCA +
Preference number: 6 (lower is better)
Translates to: CSGREGSMCCPA*SECDGQPGGVP
Trigger: TGGTACCCCGCCTGGCTGACCATCGCACTCAGATCAAGCGGGGCAGCACATACTACCTTCACGTCCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS CCA 72 bp GCTGACCGCTTTGCTACGGACTACATGGGGGCTCAATaGCACGGTGAGGCTGGCCTGGCTGTCAGATTTCGA +
Preference number: 6 (lower is better)
Translates to: ADRFATDYMGAQ*HGEAGLAVRFR
Trigger: TCGAAATCTGACAGCCAGGCCAGCCTCACCGTGCCATTGAGCCCCCATGTAGTCCGTAGCAAAGCGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 90 bp AAGACTTCAATGCTGTCCTCGCTGATTGTCCTGTGGCTGACCGCTTaGCTACGGACTACATGGGGGCTCAATGGCACGGTGAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: KTSMLSSLIVLWLTA*LRTTWGLNGTVRLA
Trigger: GGCCAGCCTCACCGTGCCATTGAGCCCCCATGTAGTCCGTAGCAAAGCGGTCAGCCACAGGACAATCAGCGAGGACAGCATTGAAGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp GCTGGCCTGGCTGTCAGATTTCGACAACACAGAGGCTaGCTTCTCGGTGCCCAGCACCTCAATGCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: AGLAVRFRQHRG*LLGAQHLNAFP
Trigger: GGGGAAAGCATTGAGGTGCTGGGCACCGAGAAGTCAGCCTCTGTGTTGTCGAAATCTGACAGCCAGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 72 bp AAGCCCCTGGCCTCCAGGTCGTACAAGGTGAGGTGGTaGACATATGCAAAGGCCCCTTCCTTAGAGTCTCCC +
Preference number: 6 (lower is better)
Translates to: KPLASRSYKVRW*TYAKAPSLESP
Trigger: GGGAGACTCTAAGGAAGGGGCCTTTGCATATGTGCACCACCTCACCTTGTACGACCTGGAGGCCAGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 72 bp ATGCTGTCCTCGCTGATTGTCCTGTGGCTGACCGCTTaGCTACGGACTACATGGGGGCTCAATGGCACGGTG +
Preference number: 6 (lower is better)
Translates to: MLSSLIVLWLTA*LRTTWGLNGTV
Trigger: CACCGTGCCATTGAGCCCCCATGTAGTCCGTAGCAAAGCGGTCAGCCACAGGACAATCAGCGAGGACAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp TTTCATCTTCGCCCAGGACCACAAGTGTCCTCCCACTaGGCAGGGAGTAGATGGCTGGGTGGGCAAAAGGGT +
Preference number: 6 (lower is better)
Translates to: FHLRPGPQVSSH*AGSRWLGGQKG
Trigger: ACCCTTTTGCCCACCCAGCCATCTACTCCCTGCTCAGTGGGAGGACACTTGTGGTCCTGGGCGAAGATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 72 bp GGCCTCCAGGTCGTACAAGGTGAGGTGGTGCACATATaGAAAGGCCCCTTCCTTAGAGTCTCCCAGTACCAC +
Preference number: 6 (lower is better)
Translates to: GLQVVQGEVVHI*KGPFLRVSQYH
Trigger: GTGGTACTGGGAGACTCTAAGGAAGGGGCCTTTGCATATGTGCACCACCTCACCTTGTACGACCTGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 72 bp GGGGACAGCGTAGGGTCTTGCTGTCCAGGTCCAGGATaGTTGTATAACGGCTGTAACGGCTCAGGGTATGGA +
Preference number: 6 (lower is better)
Translates to: GDSVGSCCPGPG*LYNGCNGSGYG
Trigger: TCCATACCCTGAGCCGTTACAGCCGTTATACAAGCATCCTGGACCTGGACAGCAAGACCCTACGCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS CCA 72 bp ACTACATGGGGGCTCAATGGCACGGTGAGGCTGGCCTaGCTGTCAGATTTCGACAACACAGAGGCTGACTTC +
Preference number: 6 (lower is better)
Translates to: TTWGLNGTVRLA*LSDFDNTEADF
Trigger: GAAGTCAGCCTCTGTGTTGTCGAAATCTGACAGCCAGGCCAGCCTCACCGTGCCATTGAGCCCCCATGTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp CACGTGGAGCCCCTGGTCCTTCTGTATGTAGCGCTGTaGGGGAATGCTCACCACACTGTCCTCATCAGAAAG +
Preference number: 6 (lower is better)
Translates to: HVEPLVLLYVAL*GNAHHTVLIRK
Trigger: CTTTCTGATGAGGACAGTGTGGTGAGCATTCCCCCACAGCGCTACATACAGAAGGACCAGGGGCTCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp GCCCCAGGTTTAGCTTTAGGAAGCTGGTTTGTCTGCTaGCCACTGCTTCTTGTGTCTCCTCACTGTGGGCGG +
Preference number: 6 (lower is better)
Translates to: APGLALGSWFVC*PLLLVSPHCGR
Trigger: CCGCCCACAGTGAGGAGACACAAGAAGCAGTGGCCAGCAGACAAACCAGCTTCCTAAAGCTAAACCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS CAA 72 bp GACAGCGTAGGGTCTTGCTGTCCAGGTCCAGGATGCTaGTATAACGGCTGTAACGGCTCAGGGTATGGAGGG +
Preference number: 6 (lower is better)
Translates to: DSVGSCCPGPGC*YNGCNGSGYGG
Trigger: CCCTCCATACCCTGAGCCGTTACAGCCGTTATACAAGCATCCTGGACCTGGACAGCAAGACCCTACGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS TCA 72 bp GTAGTCAAACCTGAGCAGTGGGTGGGTGGTCCCCGGTaGCTCCTGCATATAGTGCAGTTTCAACAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: VVKPEQWVGGPR*LLHIVQFQQLS
Trigger: GCTGAGCTGTTGAAACTGCACTATATGCAGGAGTCACCGGGGACCACCCACCCACTGCTCAGGTTTGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS GCA 72 bp TCATTGGGGATGGTAAGCAAGGGCTGGGGTCCCACCTaGTCAGAGAACTCGGAAATGAGGATGAAGTCCCTG +
Preference number: 6 (lower is better)
Translates to: SLGMVSKGWGPT*SENSEMRMKSL
Trigger: CAGGGACTTCATCCTCATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAGCCCTTGCTTACCATCCCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 72 bp CGAGCCCCAGGTTTAGCTTTAGGAAGCTGGTTTGTCTaGTGGCCACTGCTTCTTGTGTCTCCTCACTGTGGG +
Preference number: 6 (lower is better)
Translates to: RAPGLALGSWFV*WPLLLVSPHCG
Trigger: CCCACAGTGAGGAGACACAAGAAGCAGTGGCCAGCAGACAAACCAGCTTCCTAAAGCTAAACCTGGGGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS CCA 72 bp CCGGTTCTGGTGAGCCGGCACTTGCCTGGAAATGGATaGCCCCCTCATTATCCGCATAGGCTTCTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: PVLVSRHLPGNG*PPHYPHRLLLH
Trigger: ATGAAGAAGAAGCCTATGCGGATAATGAGGGGGCCATCCATTTCCAGGCAAGTGCCGGCTCACCAGAACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp GCTCACCACACTGTCCTCATCAGAAAGAGTGTAGGCTaGGGTTGGGAGAGGCACCAAGTGACCTTCACTCTC +
Preference number: 6 (lower is better)
Translates to: AHHTVLIRKSVG*GWERHQVTFTL
Trigger: GAGAGTGAAGGTCACTTGGTGCCTCTCCCAACCCCAGCCTACACTCTTTCTGATGAGGACAGTGTGGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 90 bp TGTATAGGGGACAGCGTAGGGTCTTGCTGTCCAGGTCCAGGATGCTaGTATAACGGCTGTAACGGCTCAGGGTATGGAGGGTACCCACAT +
Preference number: 6 (lower is better)
Translates to: CIGDSVGSCCPGPGC*YNGCNGSGYGGYPH
Trigger: ATGTGGGTACCCTCCATACCCTGAGCCGTTACAGCCGTTATACAAGCATCCTGGACCTGGACAGCAAGACCCTACGCTGTCCCCTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS TCA 72 bp CTTGGGGTAGGCAGAACCGGGAGGATGGCCTACGAATaGAGCCTGGTAATCCACCGACATAATCCGCAAAGA +
Preference number: 6 (lower is better)
Translates to: LGVGRTGRMAYE*SLVIHRHNPQR
Trigger: TCTTTGCGGATTATGTCGGTGGATTACCAGGCTTCATTCGTAGGCCATCCTCCCGGTTCTGCCTACCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp CTTAAGACTTCAATGCTGTCCTCGCTGATTGTCCTGTaGCTGACCGCTTTGCTACGGACTACATGGGGGCTC +
Preference number: 6 (lower is better)
Translates to: LKTSMLSSLIVL*LTALLRTTWGL
Trigger: GAGCCCCCATGTAGTCCGTAGCAAAGCGGTCAGCCACAGGACAATCAGCGAGGACAGCATTGAAGTCTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp CACACTGTCCTCATCAGAAAGAGTGTAGGCTGGGGTTaGGAGAGGCACCAAGTGACCTTCACTCTCCTTTCC +
Preference number: 6 (lower is better)
Translates to: HTVLIRKSVGWG*ERHQVTFTLLS
Trigger: GGAAAGGAGAGTGAAGGTCACTTGGTGCCTCTCCCAACCCCAGCCTACACTCTTTCTGATGAGGACAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp TCCAGTGCTTCACCGGCTTGGCATAGCAGCCATAGTTaGGAACAAAGATGGACAGTGCAGTCACCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SSASPAWHSSHS*EQRWTVQSPAS
Trigger: GGAAGCTGGTGACTGCACTGTCCATCTTTGTTCCCAACTATGGCTGCTATGCCAAGCCGGTGAAGCACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp CCTCGTTCACGAGCCCCAGGTTTAGCTTTAGGAAGCTaGTTTGTCTGCTGGCCACTGCTTCTTGTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: PRSRAPGLALGS*FVCWPLLLVSP
Trigger: AGGAGACACAAGAAGCAGTGGCCAGCAGACAAACCAGCTTCCTAAAGCTAAACCTGGGGCTCGTGAACGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS CAA 72 bp CCACACTGTCCTCATCAGAAAGAGTGTAGGCTGGGGTaGGGAGAGGCACCAAGTGACCTTCACTCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: PHCPHQKECRLG*GEAPSDLHSPF
Trigger: GAAAGGAGAGTGAAGGTCACTTGGTGCCTCTCCCAACCCCAGCCTACACTCTTTCTGATGAGGACAGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp GTATCACCAGGCTGCAAGTCAGGGATCTTCGTCTTCTaGCGAGGGTATGAGCGGATCTGCCTCAGCAAATCT +
Preference number: 6 (lower is better)
Translates to: VSPGCKSGIFVF*RGYERICLSKS
Trigger: AGATTTGCTGAGGCAGATCCGCTCATACCCTCGTCAGAAGACGAAGATCCCTGACTTGCAGCCTGGTGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp TCCTCAGGATTAGAGGTAGTGGATACCTGGTCAGCCTaGTCCTGGGTATGCTCTGTATCACCAGGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SSGLEVVDTWSA*SWVCSVSPGCK
Trigger: CTTGCAGCCTGGTGATACAGAGCATACCCAGGATCAGGCTGACCAGGTATCCACTACCTCTAATCCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 72 bp AGCTGGAGTCTATTTGGGATGGGATATTTTCCAAGTTaGCCTCCTGAGTCTCATCCGGTTCTGGTGAGCCGG +
Preference number: 6 (lower is better)
Translates to: SWSLFGMGYFPS*PPESHPVLVSR
Trigger: CCGGCTCACCAGAACCGGATGAGACTCAGGAGGGCAACTTGGAAAATATCCCATCCCAAATAGACTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp AAAACTTTGGTGTCATTGGGGATGGTAAGCAAGGGCTaGGGTCCCACCTGCTCAGAGAACTCGGAAATGAGG +
Preference number: 6 (lower is better)
Translates to: KTLVSLGMVSKG*GPTCSENSEMR
Trigger: CCTCATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAGCCCTTGCTTACCATCCCCAATGACACCAAAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp GCTAGCCAGAAGGCAGCTTGGATCCAGCTCATAAGCTaGGAACATTTCACAACTGTTGTCTCGGGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: ASQKAAWIQLIS*EHFTTVVSGRR
Trigger: CCTTCTCCCCGAGACAACAGTTGTGAAATGTTCCCAGCTTATGAGCTGGATCCAAGCTGCCTTCTGGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 72 bp CCCTTTCATATCCATATCCAGGTAGTCCAGGTTCTCTaGGGGGTCAAAACTGCGTGCCTCTGTTGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: PFHIHIQVVQVL*GVKTACLCCLH
Trigger: GTGGAGGCAACAGAGGCACGCAGTTTTGACCCCCAAGAGAACCTGGACTACCTGGATATGGATATGAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp TCTCGGTGCCCAGCACCTCAATGCTTTCCCCACTACTaGTGCTCCCTTTCATATCCATATCCAGGTAGTCCA +
Preference number: 6 (lower is better)
Translates to: SRCPAPQCFPHY*CSLSYPYPGSP
Trigger: TGGACTACCTGGATATGGATATGAAAGGGAGCATCAGTAGTGGGGAAAGCATTGAGGTGCTGGGCACCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp TGGGAACAAAGATGGACAGTGCAGTCACCAGCTTCCTaGCAATGGTTTCATCTTCGCCCAGGACCACAAGTG +
Preference number: 6 (lower is better)
Translates to: WEQRWTVQSPAS*QWFHLRPGPQV
Trigger: CACTTGTGGTCCTGGGCGAAGATGAAACCATTGTCAGGAAGCTGGTGACTGCACTGTCCATCTTTGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp GCAGTTTCAACAGCTCAGCCAGGTACTGTACCACTCTaGTGTCCTCGTTCACGAGCCCCAGGTTTAGCTTTA +
Preference number: 6 (lower is better)
Translates to: AVSTAQPGTVPL*CPRSRAPGLAL
Trigger: TAAAGCTAAACCTGGGGCTCGTGAACGAGGACATCAGAGTGGTACAGTACCTGGCTGAGCTGTTGAAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS GCA 72 bp TTTGGGGGTGTAAGCCGGTCTGCAGGTATAAAGGTCTaGATTAGCGGACTCCTCAGGATTAGAGGTAGTGGA +
Preference number: 6 (lower is better)
Translates to: FGGVSRSAGIKV*ISGLLRIRGSG
Trigger: TCCACTACCTCTAATCCTGAGGAGTCCGCTAATGCAGACCTTTATACCTGCAGACCGGCTTACACCCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 72 bp CGGATGAATTTTAAGGCATTCTGGCCAGCTCTCTTTTaGTGCCTCTCAGAGGATAGGCCAGCAGGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: RMNFKAFWPALF*CLSEDRPAGGA
Trigger: AGCACCTCCTGCTGGCCTATCCTCTGAGAGGCACAAAAAGAGAGCTGGCCAGAATGCCTTAAAATTCATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 90 bp CTTGGGAGGCAGCCTGTCCTGACTGGGCTGAGAGGGTACATTCTCTaGCTTTTCCATCCTGTCATCCACCTCTACAAAATCTTCAAAGAG +
Preference number: 6 (lower is better)
Translates to: LGRQPVLTGLRGYIL*LFHPVIHLYKIFKE
Trigger: CTCTTTGAAGATTTTGTAGAGGTGGATGACAGGATGGAAAAGCAAGAGAATGTACCCTCTCAGCCCAGTCAGGACAGGCTGCCTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp CTGCAAGTCAGGGATCTTCGTCTTCTGACGAGGGTATaGGCGGATCTGCCTCAGCAAATCTTGATGTTCGAT +
Preference number: 6 (lower is better)
Translates to: LQVRDLRLLTRV*ADLPQQILMFD
Trigger: ATCGAACATCAAGATTTGCTGAGGCAGATCCGCTCATACCCTCGTCAGAAGACGAAGATCCCTGACTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 72 bp GCACTCAGATGCTTTGGAAAATTCGGCCGAGAGCTCTaGGAACTGCTGCATGATTTTATGCTGGTCTGCGGA +
Preference number: 6 (lower is better)
Translates to: ALRCFGKFGREL*ELLHDFMLVCG
Trigger: TCCGCAGACCAGCATAAAATCATGCAGCAGTTCCAAGAGCTCTCGGCCGAATTTTCCAAAGCATCTGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 72 bp CAGCCTGTCCTGACTGGGCTGAGAGGGTACATTCTCTaGCTTTTCCATCCTGTCATCCACCTCTACAAAATC +
Preference number: 6 (lower is better)
Translates to: QPVLTGLRGYIL*LFHPVIHLYKI
Trigger: GATTTTGTAGAGGTGGATGACAGGATGGAAAAGCAAGAGAATGTACCCTCTCAGCCCAGTCAGGACAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp AACATGTGTTCAATGTGGCTAAGCTGGGCCAGGGTCTaGGTGAAATACTCAGTGTCACAGAGTTCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: NMCSMWLSWARV*VKYSVSQSSSK
Trigger: CTTGGAGGAACTCTGTGACACTGAGTATTTCACTCAGACCCTGGCCCAGCTTAGCCACATTGAACACATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp TATGCAAAGGGGAAGAAATCCAGTGCTTCACCGGCTTaGCATAGCAGCCATAGTTGGGAACAAAGATGGACA +
Preference number: 6 (lower is better)
Translates to: YAKGKKSSASPA*HSSHSWEQRWT
Trigger: TGTCCATCTTTGTTCCCAACTATGGCTGCTATGCCAAGCCGGTGAAGCACTGGATTTCTTCCCCTTTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 90 bp CATCTTCAAGCACTCAGATGCTTTGGAAAATTCGGCCGAGAGCTCTaGGAACTGCTGCATGATTTTATGCTGGTCTGCGGAGATATAAGC +
Preference number: 6 (lower is better)
Translates to: HLQALRCFGKFGREL*ELLHDFMLVCGDIS
Trigger: GCTTATATCTCCGCAGACCAGCATAAAATCATGCAGCAGTTCCAAGAGCTCTCGGCCGAATTTTCCAAAGCATCTGAGTGCTTGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp TGGAAAATTCGGCCGAGAGCTCTTGGAACTGCTGCATaGTTTTATGCTGGTCTGCGGAGATATAAGCCATAC +
Preference number: 6 (lower is better)
Translates to: WKIRPRALGTAA*FYAGLRRYKPY
Trigger: GTATGGCTTATATCTCCGCAGACCAGCATAAAATCATGCAGCAGTTCCAAGAGCTCTCGGCCGAATTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS TCA 72 bp ATGAGCGGATCTGCCTCAGCAAATCTTGATGTTCGATaGTGGACTTCTCCACATTGGCCAGTTCATTGGCTT +
Preference number: 6 (lower is better)
Translates to: MSGSASANLDVR*WTSPHWPVHWL
Trigger: AAGCCAATGAACTGGCCAATGTGGAGAAGTCCATCATCGAACATCAAGATTTGCTGAGGCAGATCCGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS GCA 72 bp GGTCTTCAACTTCTTGTCAAAACACTTGGTGGACTTTaGTTTGATGAGTTTGGGGGTGTAAGCCGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: GLQLLVKTLGGL*FDEFGGVSRSA
Trigger: TGCAGACCGGCTTACACCCCCAAACTCATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAAGTTGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp CTCCTTTCCAATACAGCAGCTGGAGTCTATTTGGGATaGGATATTTTCCAAGTTGCCCTCCTGAGTCTCATC +
Preference number: 6 (lower is better)
Translates to: LLSNTAAGVYLG*DIFQVALLSLI
Trigger: GATGAGACTCAGGAGGGCAACTTGGAAAATATCCCATCCCAAATAGACTCCAGCTGCTGTATTGGAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp CATCTTACTAACATCTCGGCTAGCCAGAAGGCAGCTTaGATCCAGCTCATAAGCTGGGAACATTTCACAACT +
Preference number: 6 (lower is better)
Translates to: HLTNISASQKAA*IQLISWEHFTT
Trigger: AGTTGTGAAATGTTCCCAGCTTATGAGCTGGATCCAAGCTGCCTTCTGGCTAGCCGAGATGTTAGTAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 90 bp GTGAAATACTCAGTGTCACAGAGTTCCTCCAAGGTCTTCAACTTCTaGTCAAAACACTTGGTGGACTTTGCTTTGATGAGTTTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: VKYSVSQSSSKVFNF*SKHLVDFALMSLGV
Trigger: CACCCCCAAACTCATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTTGGAGGAACTCTGTGACACTGAGTATTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp TCTCAATCGCCTGAGAAGAATAAAAACCCTTGTCGTTaGCTTTCTTCTGGATCTCGGTTTCTGTGTGTAGCA +
Preference number: 6 (lower is better)
Translates to: SQSPEKNKNPCR*LSSGSRFLCVA
Trigger: TGCTACACACAGAAACCGAGATCCAGAAGAAAGCCAACGACAAGGGTTTTTATTCTTCTCAGGCGATTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp ATTATCCGCATAGGCTTCTTCTTCATTAATGGCACTTaGGTAACTGGCCTTAAAGTCATCAGGAATGAGGGC +
Preference number: 6 (lower is better)
Translates to: IIRIGFFFINGT*VTGLKVIRNEG
Trigger: GCCCTCATTCCTGATGACTTTAAGGCCAGTTACCCAAGTGCCATTAATGAAGAAGAAGCCTATGCGGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp GAGGCCACTCTTTGTAGGCCAATAAGCTTCCACTTCTaGAAATCCATAATATGCAAAGGGGAAGAAATCCAG +
Preference number: 6 (lower is better)
Translates to: EATLCRPISFHF*KSIICKGEEIQ
Trigger: CTGGATTTCTTCCCCTTTGCATATTATGGATTTCCAGAAGTGGAAGCTTATTGGCCTACAAAGAGTGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056907.7
CDS CAA 90 bp ATCCACCTCTACAAAATCTTCAAAGAGGAAATTCGTTATGGGCTGTaGTTTTCGAAGCACTCTGTCAATCTGACTGGTCAGGAGGTAGCA +
Preference number: 6 (lower is better)
Translates to: IHLYKIFKEEIRYGL*FSKHSVNLTGQEVA
Trigger: TGCTACCTCCTGACCAGTCAGATTGACAGAGTGCTTCGAAAACAACAGCCCATAACGAATTTCCTCTTTGAAGATTTTGTAGAGGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 72 bp TCAGTGTCACAGAGTTCCTCCAAGGTCTTCAACTTCTaGTCAAAACACTTGGTGGACTTTGCTTTGATGAGT +
Preference number: 6 (lower is better)
Translates to: SVSQSSSKVFNF*SKHLVDFALMS
Trigger: ACTCATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTTGGAGGAACTCTGTGACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CCA 72 bp CCACCTCTACAAAATCTTCAAAGAGGAAATTCGTTATaGGCTGTTGTTTTCGAAGCACTCTGTCAATCTGAC +
Preference number: 6 (lower is better)
Translates to: PPLQNLQRGNSL*AVVFEALCQSD
Trigger: GTCAGATTGACAGAGTGCTTCGAAAACAACAGCCCATAACGAATTTCCTCTTTGAAGATTTTGTAGAGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5
CDS CAA 72 bp TACAAAATCTTCAAAGAGGAAATTCGTTATGGGCTGTaGTTTTCGAAGCACTCTGTCAATCTGACTGGTCAG +
Preference number: 6 (lower is better)
Translates to: YKIFKEEIRYGL*FSKHSVNLTGQ
Trigger: CTGACCAGTCAGATTGACAGAGTGCTTCGAAAACAACAGCCCATAACGAATTTCCTCTTTGAAGATTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056907.7
ENSMUST00000102667.5