Pregenerated sensors for SMCO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043298Ensembl transcript IDs: ENSMUST00000068293.4, ENSMUST00000111894.2, ENSMUST00000203468.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATTTGAAGACATTTGCTGCGAACAAGGAAGCAATAGCCTGTGCCTaGTGGTCTATGATGCCTTTACACCTCAGTGGTTCTGACAACAGG | + |
|
Preference number: 1 (lower is better) Translates to: YLKTFAANKEAIACA*WSMMPLHLSGSDNR Trigger: CCTGTTGTCAGAACCACTGAGGTGTAAAGGCATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTTCAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR GCA 90 bp | AAATGGGAATGGTCTCTCCATTTAGCAGGAATATTTGAAGACATTTaGTGCGAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGAT | + |
|
Preference number: 1 (lower is better) Translates to: KWEWSLHLAGIFEDI*CEQGSNSLCLLVYD Trigger: ATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTTCAAATATTCCTGCTAAATGGAGAGACCATTCCCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR GCA 90 bp | TTGACCACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTaGATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATC | + |
|
Preference number: 1 (lower is better) Translates to: LTTQEIDDKQVVNID*ITDNIYYLILSQSI Trigger: GATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGTGGTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGGTGCCTGCTGGTCTATaGTGCCTTTACACCTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IDCITDNIYYLILSQSIQVPAGL*CLYTSV Trigger: CACTGAGGTGTAAAGGCATCATAGACCAGCAGGCAC...CTGGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGTATGTATGTTTTACTTaGAGGTCACAGGTCTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: IDCITDNIYYLILSQSIQYVCFT*RSQVCV Trigger: GACACAGACCTGTGACCTTCAAGTAAAACATACATA...CTGGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATTTTGAAGACATTTGCTaGGAACAAGGAAGCAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDFEDIC*EQGSNS Trigger: GCTATTGCTTCCTTGTTCGCAGCAAATGTCTTCAAA...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR TCA 72 bp | GTTCCATCAATAGGCCTCCATGGCCTCTCCTTTTCCTaGGTTCAGGAGGCAATTAACATAGGTCTGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: VPSIGLHGLSFS*VQEAINIGLQM Trigger: CATTTGCAGACCTATGTTAATTGCCTCCTGAACTCAGGAAAAGGAGAGGCCATGGAGGCCTATTGATGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068293.4 |
||
| 3UTR GCA 72 bp | TGGTCTCTCCATTTAGCAGGAATATTTGAAGACATTTaGTGCGAACAAGGAAGCAATAGCCTGTGCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WSLHLAGIFEDI*CEQGSNSLCLL Trigger: CAGCAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTTCAAATATTCCTGCTAAATGGAGAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR CCA 72 bp | AGGAGAACCTCGCAGATGCATGGCTTTCGTTCATTCTaGAACATAATGTTGTTGAGGTTGCTCTGCCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RRTSQMHGFRSF*NIMLLRLLCLH Trigger: ATGAAGGCAGAGCAACCTCAACAACATTATGTTCCAGAATGAACGAAAGCCATGCATCTGCGAGGTTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGCCTTTACACCTCAGTTATCTGTATCCACGTaGTTGGAGACAAATGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EQGSNSLCLLVYDAFTPQLSVST*LETNGK Trigger: TTTTCCATTTGTCTCCAACAACGTGGATACAGATAA...CTGAGGTGTAAAGGCATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGACATTTGCTGCGAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGTTATCTGTATCCACGTaGTTGGAGACAAATGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTFAANKEAIACACWSMMLSVST*LETNGK Trigger: TTTTCCATTTGTCTCCAACAACGTGGATACAGATAA...CATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCTCTGTATCCACGTTGTaGGAGACAAATGGAAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: RWSILTALQTTFIISSFPSVSTL*ETNGKL Trigger: TAATTTTCCATTTGTCTCCAACAACGTGGATACAGA...GGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCTGTATCCACGTTGTaGGAGACAAATGGAAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: VVNIDCITDNIYYLILSQSVSTL*ETNGKL Trigger: TAATTTTCCATTTGTCTCCAACAACGTGGATACAGA...TTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR TCA 72 bp | TCAGATGTTATTAAGTCTGTCTTATTAGACATTAAGTaGTGTTTGAAACAGGAAATGGGAATGGTCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SDVIKSVLLDIK*CLKQEMGMVSP Trigger: TGGAGAGACCATTCCCATTTCCTGTTTCAAACATCACTTAATGTCTAATAAGACAGACTTAATAACATCTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGCCTTTACACCTCAGCTTTTGATGGCTGCCTaGAGCTGTGTCCTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EQGSNSLCLLVYDAFTPQLLMAA*SCVLST Trigger: AGTGGAGAGGACACAGCTTCAGGCAGCCATCAAAAG...CTGAGGTGTAAAGGCATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATATTTGAAGACATTTGCTGCGAACAAGGAAGCAATAGCCTGTGCCTGTCCAGCAGCTGCTGGTaGAGGCGGTTTACTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGIFEDICCEQGSNSLCLSSSCW*RRFTSC Trigger: ACAGGAAGTAAACCGCCTTCACCAGCAGCTGCTGGA...CAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTTCAAATATTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | GAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGCCTTTACACCTCAGAGGGTTGGCTCTAGTTaGTCTTTCAGTGCCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQGSNSLCLLVYDAFTPQRVGSS*SFSASS Trigger: TGACGAGGCACTGAAAGACCAACTAGAGCCAACCCT...CTGAGGTGTAAAGGCATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGACAACAGGGTAAGAAAACTGGATAGAGCTTTATCCCCTGAGGGTCTAGCCAGTTGTGACACTTaGGCCCACCAGTTTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSDNRVRKLDRALSPEGLASCDT*AHQFNS Trigger: GCTGTTAAACTGGTGGGCTCAAGTGTCACAACTGGC...TAGACCCTCAGGGGATAAAGCTCTATCCAGTTTTCTTACCCTGTTGTCAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGCCTTTACACCTCAGGCTCCCAAGATGGCTTaGATGATCATATCTATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EQGSNSLCLLVYDAFTPQAPKMA*MIISIP Trigger: CGGGATAGATATGATCATTCAAGCCATCTTGGGAGC...CTGAGGTGTAAAGGCATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | AAGACATTTGCTGCGAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGTTCCTGTCGCCTCCTTaGGTTTTGTGGGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTFAANKEAIACACWSMMFLSPP*VLWVEE Trigger: TTCCTCTACCCACAAAACCCAAGGAGGCGACAGGAA...CATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATATTTGAAGACATTTGCTGCGAACAAGGAAGCAATAGCCTGTGCCTGCGCTTTTCATTTCAATaGAGGCCAGCCTGCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGIFEDICCEQGSNSLCLRFSFQ*RPACNP Trigger: TGGGTTGCAGGCTGGCCTTCATTGAAATGAAAAGCG...CAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTTCAAATATTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGACAACAGGGTAAGAAAACTGGATAGAGCTTTATCCCCTGAGGGTCTAGCTTCTCATAACTTTTaGTGGCTGCCTGAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSDNRVRKLDRALSPEGLASHNF*WLPEAV Trigger: CACAGCTTCAGGCAGCCATCAAAAGTTATGAGAAGC...TAGACCCTCAGGGGATAAAGCTCTATCCAGTTTTCTTACCCTGTTGTCAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| 3UTR CAA 72 bp | CAGATGCATGGCTTTCGTTCATTCTGGAACATAATGTaGTTGAGGTTGCTCTGCCTTCATTTCCGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QMHGFRSFWNIM*LRLLCLHFRVA Trigger: TGCCACCCGGAAATGAAGGCAGAGCAACCTCAACAACATTATGTTCCAGAATGAACGAAAGCCATGCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTGACCACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTGCACGGCAACGCCAATaGTTCCAAGGAGAGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTTQEIDDKQVVNIDCIARQRQ*FQGEKS Trigger: GGACTTCTCTCCTTGGAAGCATTGGCGTTGCCGTGC...AATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGTGGTCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | TTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACATCCAGCAGCTGCTGGTaGAGGCGGTTTACTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCRDHCILCLVLFTMFHTSSSCW*RRFTSC Trigger: ACAGGAAGTAAACCGCCTTCACCAGCAGCTGCTGGA...TGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATGCACGGCAACGCCAATaGTTCCAAGGAGAGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDARQRQ*FQGEKS Trigger: GGACTTCTCTCCTTGGAAGCATTGGCGTTGCCGTGC...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | TTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACAGCACGGCAACGCCAATaGTTCCAAGGAGAGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCRDHCILCLVLFTMFHTARQRQ*FQGEKS Trigger: GGACTTCTCTCCTTGGAAGCATTGGCGTTGCCGTGC...TGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCTCCAGCAGCTGCTGGTaGAGGCGGTTTACTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILTALQTTFIISSFPNPSSSSCW*RRFTSC Trigger: ACAGGAAGTAAACCGCCTTCACCAGCAGCTGCTGGA...GGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGACAACAGGGTAAGAAAACTGGATAGAGCTTTATCCCCTGAGGGTCTATGTCACAGTTTTCTTTaGTGGTTCCATCGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSDNRVRKLDRALSPEGLCHSFL*WFHRFS Trigger: TGAAAAGCGATGGAACCATCAAAGAAAACTGTGACA...TAGACCCTCAGGGGATAAAGCTCTATCCAGTTTTCTTACCCTGTTGTCAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTACAGACAACATTGCCAGTTGTGACACTTaGGCCCACCAGTTTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEIDDKQVVNIDCITDNIASCDT*AHQFNS Trigger: GCTGTTAAACTGGTGGGCTCAAGTGTCACAACTGGC...AATGTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATCTTTTGATGGCTGCCTaGAGCTGTGTCCTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDLLMAA*SCVLST Trigger: AGTGGAGAGGACACAGCTTCAGGCAGCCATCAAAAG...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | TTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACACTTTTGATGGCTGCCTaGAGCTGTGTCCTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LCRDHCILCLVLFTMFHTLLMAA*SCVLST Trigger: AGTGGAGAGGACACAGCTTCAGGCAGCCATCAAAAG...TGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAATTGTTTATCTGTATCCACGTTGTTGGAGACAAATGGAAAATTACCCATGATGGTACTTTGCTaGGGCAGCCTTGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPNCLSVSTLLETNGKLPMMVLC*GSLELL Trigger: GAGGAGTTCAAGGCTGCCTCAGCAAAGTACCATCAT...GGGTAATTTTCCATTTGTCTCCAACAACGTGGATACAGATAAACAATTTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAAAGCCACTGCACTGGCTaGAGATGTAGCTTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVNIDCITDNIYYLILSQSHCTG*RCSFSQ Trigger: CTGGGAGAAGCTACATCTGCAGCCAGTGCAGTGGCT...TTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | ATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGCCACTGCACTGGCTaGAGATGTAGCTTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILTALQTTFIISSFPNPSSHCTG*RCSFSQ Trigger: CTGGGAGAAGCTACATCTGCAGCCAGTGCAGTGGCT...GGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATGACCCTCCTTGGGTTTTGTaGGTAGAGGAAGTCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCFVYNVPHTLTTQEIDDPPWVL*VEEVTL Trigger: CAGAGTGACTTCCTCTACCCACAAAACCCAAGGAGG...GTCATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | TATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACACAGCTTGTTGGTGACCTaGAAGCTGTCAGACAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YAGITAFYALFCLQCSTHSLLVT*KLSDKQ Trigger: CTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCT...GTGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTACAGACAACAGGGTTGGCTCTAGTTaGTCTTTCAGTGCCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQEIDDKQVVNIDCITDNRVGSS*SFSASS Trigger: TGACGAGGCACTGAAAGACCAACTAGAGCCAACCCT...GTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGCGCTTTTCATTTCAATaGAGGCCAGCCTGCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDCITDNIYYLILSQSIQRFSFQ*RPACNP Trigger: TGGGTTGCAGGCTGGCCTTCATTGAAATGAAAAGCG...CTGGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAAGCCAGTTGTGACACTTaGGCCCACCAGTTTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVNIDCITDNIYYLILSQASCDT*AHQFNS Trigger: GCTGTTAAACTGGTGGGCTCAAGTGTCACAACTGGC...TTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTGACCACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTGCTCCCAAGATGGCTTaGATGATCATATCTATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLTTQEIDDKQVVNIDCIAPKMA*MIISIP Trigger: CGGGATAGATATGATCATTCAAGCCATCTTGGGAGC...AATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGTGGTCAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTGACCACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTGCTTCTCATAACTTTTaGTGGCTGCCTGAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLTTQEIDDKQVVNIDCIASHNF*WLPEAV Trigger: CACAGCTTCAGGCAGCCATCAAAAGTTATGAGAAGC...AATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGTGGTCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGATGATGGTACTTTGCTaGGGCAGCCTTGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IDCITDNIYYLILSQSIQMMVLC*GSLELL Trigger: GAGGAGTTCAAGGCTGCCTCAGCAAAGTACCATCAT...CTGGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | CCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATGACACCTCAGTGATAGCATaGTGGTACTTTGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCFVYNVPHTLTTQEIDDTSVIA*WYFAEA Trigger: TGCCTCAGCAAAGTACCATCATGCTATCACTGAGGT...GTCATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | TTTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACCCTCCTTGGGTTTTGTaGGTAGAGGAAGTCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FMQGSLHFMPCFVYNVPHPPWVL*VEEVTL Trigger: CAGAGTGACTTCCTCTACCCACAAAACCCAAGGAGG...GTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | TTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACACCTCCTTGGGTTTTGTaGGTAGAGGAAGTCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCRDHCILCLVLFTMFHTPPWVL*VEEVTL Trigger: CAGAGTGACTTCCTCTACCCACAAAACCCAAGGAGG...TGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTACAGACAACATTAGCTTGTTGGTGACCTaGAAGCTGTCAGACAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEIDDKQVVNIDCITDNISLLVT*KLSDKQ Trigger: CTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCT...AATGTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | TTTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACAGCTTGTTGGTGACCTaGAAGCTGTCAGACAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMQGSLHFMPCFVYNVPHSLLVT*KLSDKQ Trigger: CTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCT...GTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATAGGGTTGGCTCTAGTTaGTCTTTCAGTGCCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDRVGSS*SFSASS Trigger: TGACGAGGCACTGAAAGACCAACTAGAGCCAACCCT...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCGCTTCTCATAACTTTTaGTGGCTGCCTGAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWSILTALQTTFIISSFPASHNF*WLPEAV Trigger: CACAGCTTCAGGCAGCCATCAAAAGTTATGAGAAGC...GGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAAATGATGGTACTTTGCTaGGGCAGCCTTGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVNIDCITDNIYYLILSQMMVLC*GSLELL Trigger: GAGGAGTTCAAGGCTGCCTCAGCAAAGTACCATCAT...TTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCACCTCAGTGATAGCATaGTGGTACTTTGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWSILTALQTTFIISSFPTSVIA*WYFAEA Trigger: TGCCTCAGCAAAGTACCATCATGCTATCACTGAGGT...GGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CCA 90 bp | ATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCTTCCTGTCGCCTCCTTaGGTTTTGTGGGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTALQTTFIISSFPNPSFLSPP*VLWVEE Trigger: TTCCTCTACCCACAAAACCCAAGGAGGCGACAGGAA...GGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCGCTCCCAAGATGGCTTaGATGATCATATCTATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILTALQTTFIISSFPNPSAPKMA*MIISIP Trigger: CGGGATAGATATGATCATTCAAGCCATCTTGGGAGC...GGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| 3UTR CAA 72 bp | TTTATGCCTTGTTTTGTTTACAATGTTCCACACACTTaGACCACTCAAGAGATAGATGACAAACAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FMPCFVYNVPHT*TTQEIDDKQVV Trigger: GACCACCTGTTTGTCATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | TTTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACTGTCACAGTTTTCTTTaGTGGTTCCATCGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FMQGSLHFMPCFVYNVPHCHSFL*WFHRFS Trigger: TGAAAAGCGATGGAACCATCAAAGAAAACTGTGACA...GTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGTGTCACAGTTTTCTTTaGTGGTTCCATCGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IDCITDNIYYLILSQSIQCHSFL*WFHRFS Trigger: TGAAAAGCGATGGAACCATCAAAGAAAACTGTGACA...CTGGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATGACGCCTCGTCAATCTTTTaGAGTTCCTTTTGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PCFVYNVPHTLTTQEIDDASSIF*SSFWIF Trigger: AAAAATCCAAAAGGAACTGCAAAAGATTGACGAGGC...GTCATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | TTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACAGCCTCGTCAATCTTTTaGAGTTCCTTTTGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCRDHCILCLVLFTMFHTASSIF*SSFWIF Trigger: AAAAATCCAAAAGGAACTGCAAAAGATTGACGAGGC...TGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR GCA 90 bp | TTTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACGCCTCGTCAATCTTTTaGAGTTCCTTTTGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FMQGSLHFMPCFVYNVPHASSIF*SSFWIF Trigger: AAAAATCCAAAAGGAACTGCAAAAGATTGACGAGGC...GTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS TCA 90 bp | CATCTTAGCTGGCGCTTCACAGCAGTGGCAACCTCAGTGATAGCATaGTGGTACTTTGCTGAGGCAGCCTTGAACTCCTCCAGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLSWRFTAVATSVIA*WYFAEAALNSSRCF Trigger: GAAGCACCTGGAGGAGTTCAAGGCTGCCTCAGCAAAGTACCATCATGCTATCACTGAGGTTGCCACTGCTGTGAAGCGCCAGCTAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS TCA 90 bp | CTGAGCACGGCAACGCCAATGCTTCCAAGGAGAGAAGTCCCGATGTaGGCTAGCACAGAGACCAGCTTGCTAATTATGCCAGTTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSTATPMLPRREVPM*ASTETSLLIMPVVT Trigger: TGTCACAACTGGCATAATTAGCAAGCTGGTCTCTGTGCTAGCTCACATCGGGACTTCTCTCCTTGGAAGCATTGGCGTTGCCGTGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS GCA 90 bp | GGCAGCCTTGAACTCCTCCAGGTGCTTCTCATAACTTTTGATGGCTaGCTGAAGCTGTGTCCTCTCCACTGCTCCCAAGATGGCTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSLELLQVLLITFDG*LKLCPLHCSQDGLN Trigger: ATTCAAGCCATCTTGGGAGCAGTGGAGAGGACACAGCTTCAGGCAGCCATCAAAAGTTATGAGAAGCACCTGGAGGAGTTCAAGGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | GAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGCCTTTACACCTCAGCTTCCTGTCGCCTCCTaGGGTTTTGTGGGTAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EQGSNSLCLLVYDAFTPQLPVAS*GFVGRG Trigger: TCCTCTACCCACAAAACCCAAGGAGGCGACAGGAAG...CTGAGGTGTAAAGGCATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | GAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGCCTTTACACCTCAGACCCCTGTGAGCTTGTaGGTGACCTGGAAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQGSNSLCLLVYDAFTPQTPVSL*VTWKLS Trigger: TGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGT...CTGAGGTGTAAAGGCATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS GCA 90 bp | CTGGCTGCAGATGTAGCTTCTCCCAGGATGACAGAAATGACCTTCTaGACGATGGCAATCTTCTCCGTCTCCCTTTCCTTAATATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAADVASPRMTEMTF*TMAIFSVSLSLISC Trigger: GCAGGATATTAAGGAAAGGGAGACGGAGAAGATTGCCATCGTGCAGAAGGTCATTTCTGTCATCCTGGGAGAAGCTACATCTGCAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CCA 90 bp | GTTCCATCGCTTTTCATTTCAATGAAGGCCAGCCTGCAACCCAAGTaGGTATTAAGAACCCCTGTGAGCTTGTTGGTGACCTGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSLFISMKASLQPK*VLRTPVSLLVTWKL Trigger: CAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCTTAATACCCACTTGGGTTGCAGGCTGGCCTTCATTGAAATGAAAAGCGATGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | AAGACATTTGCTGCGAACAAGGAAGCAATAGCCTGTGCCTGCTGGTCTATGATGTCGCCTCCTTGGGTTTaGTGGGTAGAGGAAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: KTFAANKEAIACACWSMMSPPWV*WVEEVT Trigger: AGTGACTTCCTCTACCCACAAAACCCAAGGAGGCGA...CATCATAGACCAGCAGGCACAGGCTATTGCTTCCTTGTTCGCAGCAAATGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS GCA 90 bp | CTTCTCATAACTTTTGATGGCTGCCTGAAGCTGTGTCCTCTCCACTaGTCCCAAGATGGCTTGAATGATCATATCTATCCCGAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLITFDGCLKLCPLH*SQDGLNDHIYPEAE Trigger: CTCAGCCTCGGGATAGATATGATCATTCAAGCCATCTTGGGAGCAGTGGAGAGGACACAGCTTCAGGCAGCCATCAAAAGTTATGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | TATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACACAGAACCCCTGTGAGCTaGTTGGTGACCTGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YAGITAFYALFCLQCSTHRTPVS*LVTWKL Trigger: CAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCT...GTGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATGACTTTGCTGAGGCAGCCTaGAACTCCTCCAGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCFVYNVPHTLTTQEIDDFAEAA*NSSRCF Trigger: GAAGCACCTGGAGGAGTTCAAGGCTGCCTCAGCAAA...GTCATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTACAGACAACTTTGCTGAGGCAGCCTaGAACTCCTCCAGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQEIDDKQVVNIDCITDNFAEAA*NSSRCF Trigger: GAAGCACCTGGAGGAGTTCAAGGCTGCCTCAGCAAA...GTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTACAGACAACTCGCCTCCTTGGGTTTaGTGGGTAGAGGAAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TQEIDDKQVVNIDCITDNSPPWV*WVEEVT Trigger: AGTGACTTCCTCTACCCACAAAACCCAAGGAGGCGA...GTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | TTTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACCTTCCTGTCGCCTCCTaGGGTTTTGTGGGTAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FMQGSLHFMPCFVYNVPHLPVAS*GFVGRG Trigger: TCCTCTACCCACAAAACCCAAGGAGGCGACAGGAAG...GTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCACCCCTGTGAGCTTGTaGGTGACCTGGAAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RWSILTALQTTFIISSFPTPVSL*VTWKLS Trigger: TGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGT...GGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGACCCCTGTGAGCTTGTaGGTGACCTGGAAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IDCITDNIYYLILSQSIQTPVSL*VTWKLS Trigger: TGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGT...CTGGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | TTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACAAGAACCCCTGTGAGCTaGTTGGTGACCTGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCRDHCILCLVLFTMFHTRTPVS*LVTWKL Trigger: CAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCT...TGTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATTTTGCTGAGGCAGCCTaGAACTCCTCCAGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDFAEAA*NSSRCF Trigger: GAAGCACCTGGAGGAGTTCAAGGCTGCCTCAGCAAA...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTACAGACAACATTTCGCCTCCTTGGGTTTaGTGGGTAGAGGAAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QEIDDKQVVNIDCITDNISPPWV*WVEEVT Trigger: AGTGACTTCCTCTACCCACAAAACCCAAGGAGGCGA...AATGTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAAAGAACCCCTGTGAGCTaGTTGGTGACCTGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVNIDCITDNIYYLILSQRTPVS*LVTWKL Trigger: CAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCT...TTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAATTGTTTATCTGTATCCACGTTGTTGGAGACAAATGGAAAATTACCCAGCACAGAGACCAGCTaGCTAATTATGCCAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPNCLSVSTLLETNGKLPSTETS*LIMPVV Trigger: CACAACTGGCATAATTAGCAAGCTGGTCTCTGTGCT...GGGTAATTTTCCATTTGTCTCCAACAACGTGGATACAGATAAACAATTTGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | TTTATGCAGGGATCACTGCATTTTATGCCTTGTTTTGTTTACAATGTTCCACACAGCACAGAGACCAGCTaGCTAATTATGCCAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FMQGSLHFMPCFVYNVPHSTETS*LIMPVV Trigger: CACAACTGGCATAATTAGCAAGCTGGTCTCTGTGCT...GTGTGGAACATTGTAAACAAAACAAGGCATAAAATGCAGTGATCCCTGCATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATAGCACAGAGACCAGCTaGCTAATTATGCCAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDSTETS*LIMPVV Trigger: CACAACTGGCATAATTAGCAAGCTGGTCTCTGTGCT...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTGACCACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTTGCTCCCAAGATGGCTaGAATGATCATATCTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLTTQEIDDKQVVNIDCICSQDG*NDHIYP Trigger: GGGATAGATATGATCATTCAAGCCATCTTGGGAGCA...AATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGTGGTCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAATTGTTTATCTGTATCCACGTTGTTGGAGACAAATGGAAAATTACCCTGCTCCCAAGATGGCTaGAATGATCATATCTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TPNCLSVSTLLETNGKLPCSQDG*NDHIYP Trigger: GGGATAGATATGATCATTCAAGCCATCTTGGGAGCA...GGGTAATTTTCCATTTGTCTCCAACAACGTGGATACAGATAAACAATTTGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068293.4 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATTGCTCCCAAGATGGCTaGAATGATCATATCTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDCSQDG*NDHIYP Trigger: GGGATAGATATGATCATTCAAGCCATCTTGGGAGCA...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTGACCACTCAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTTGCCTCGTCAATCTTTaGCAGTTCCTTTTGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLTTQEIDDKQVVNIDCICLVNL*QFLLDF Trigger: AAAATCCAAAAGGAACTGCAAAAGATTGACGAGGCA...AATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTGAGTGGTCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTGTTTTGTTTACAATGTTCCACACACTTTGACCACTCAAGAGATAGATCTTTTGCAGTTCCTTTaGGATTTTTGTCATGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MPCFVYNVPHTLTTQEIDLLQFL*DFCHGL Trigger: CAAGCCATGACAAAAATCCAAAAGGAACTGCAAAAG...ATCTATCTCTTGAGTGGTCAAAGTGTGTGGAACATTGTAAACAAAACAAGGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGATAGATGACAAACAGGTGGTCAATATTGACTGCATTACAGACAACATTCTTTTGCAGTTCCTTTaGGATTTTTGTCATGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QEIDDKQVVNIDCITDNILLQFL*DFCHGL Trigger: CAAGCCATGACAAAAATCCAAAAGGAACTGCAAAAG...AATGTTGTCTGTAATGCAGTCAATATTGACCACCTGTTTGTCATCTATCTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | ATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATCCATCCAGTGCCTCGTCAATCTTTaGCAGTTCCTTTTGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: IDCITDNIYYLILSQSIQCLVNL*QFLLDF Trigger: AAAATCCAAAAGGAACTGCAAAAGATTGACGAGGCA...CTGGATGGATTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAACTTTTGCAGTTCCTTTaGGATTTTTGTCATGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVNIDCITDNIYYLILSQLLQFL*DFCHGL Trigger: CAAGCCATGACAAAAATCCAAAAGGAACTGCAAAAG...TTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTCAATATTGACTGCATTACAGACAACATTTATTATCTCATCCTTTCCCAATGCCTCGTCAATCTTTaGCAGTTCCTTTTGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVNIDCITDNIYYLILSQCLVNL*QFLLDF Trigger: AAAATCCAAAAGGAACTGCAAAAGATTGACGAGGCA...TTGGGAAAGGATGAGATAATAAATGTTGTCTGTAATGCAGTCAATATTGACCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CAA 90 bp | GCCAGCCTGCAACCCAAGTGGGTATTAAGAACCCCTGTGAGCTTGTaGGTGACCTGGAAGCTGTCAGACAAGCAGTCCAGCAGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASLQPKWVLRTPVSL*VTWKLSDKQSSSCW Trigger: CCAGCAGCTGCTGGACTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCTTAATACCCACTTGGGTTGCAGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CAA 90 bp | AAGGCCAGCCTGCAACCCAAGTGGGTATTAAGAACCCCTGTGAGCTaGTTGGTGACCTGGAAGCTGTCAGACAAGCAGTCCAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KASLQPKWVLRTPVS*LVTWKLSDKQSSSC Trigger: GCAGCTGCTGGACTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCTTAATACCCACTTGGGTTGCAGGCTGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CAA 90 bp | GATGGCTGCCTGAAGCTGTGTCCTCTCCACTGCTCCCAAGATGGCTaGAATGATCATATCTATCCCGAGGCTGAGCACGGCAACGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: DGCLKLCPLHCSQDG*NDHIYPEAEHGNAN Trigger: ATTGGCGTTGCCGTGCTCAGCCTCGGGATAGATATGATCATTCAAGCCATCTTGGGAGCAGTGGAGAGGACACAGCTTCAGGCAGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CCA 72 bp | TGGGTATTAAGAACCCCTGTGAGCTTGTTGGTGACCTaGAAGCTGTCAGACAAGCAGTCCAGCAGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WVLRTPVSLLVT*KLSDKQSSSCW Trigger: CCAGCAGCTGCTGGACTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCTTAATACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CAA 72 bp | CTGAAGCTGTGTCCTCTCCACTGCTCCCAAGATGGCTaGAATGATCATATCTATCCCGAGGCTGAGCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: LKLCPLHCSQDG*NDHIYPEAEHG Trigger: GCCGTGCTCAGCCTCGGGATAGATATGATCATTCAAGCCATCTTGGGAGCAGTGGAGAGGACACAGCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CAA 72 bp | CAACCCAAGTGGGTATTAAGAACCCCTGTGAGCTTGTaGGTGACCTGGAAGCTGTCAGACAAGCAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QPKWVLRTPVSL*VTWKLSDKQSS Trigger: GCTGGACTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCTTAATACCCACTTGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CAA 72 bp | CTGCAACCCAAGTGGGTATTAAGAACCCCTGTGAGCTaGTTGGTGACCTGGAAGCTGTCAGACAAGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQPKWVLRTPVS*LVTWKLSDKQS Trigger: GGACTGCTTGTCTGACAGCTTCCAGGTCACCAACAAGCTCACAGGGGTTCTTAATACCCACTTGGGTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS TCA 72 bp | AGAGACCAGCTTGCTAATTATGCCAGTTGTGACACTTaGGCCCACCAGTTTAACAGCCACTGCACTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RDQLANYASCDT*AHQFNSHCTGC Trigger: GCAGCCAGTGCAGTGGCTGTTAAACTGGTGGGCTCAAGTGTCACAACTGGCATAATTAGCAAGCTGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS GCA 72 bp | GAACTCCTCCAGGTGCTTCTCATAACTTTTGATGGCTaGCTGAAGCTGTGTCCTCTCCACTGCTCCCAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ELLQVLLITFDG*LKLCPLHCSQD Trigger: ATCTTGGGAGCAGTGGAGAGGACACAGCTTCAGGCAGCCATCAAAAGTTATGAGAAGCACCTGGAGGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS GCA 72 bp | GATGTAGCTTCTCCCAGGATGACAGAAATGACCTTCTaGACGATGGCAATCTTCTCCGTCTCCCTTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: DVASPRMTEMTF*TMAIFSVSLSL Trigger: TAAGGAAAGGGAGACGGAGAAGATTGCCATCGTGCAGAAGGTCATTTCTGTCATCCTGGGAGAAGCTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CCA 72 bp | CTTTTCATTTCAATGAAGGCCAGCCTGCAACCCAAGTaGGTATTAAGAACCCCTGTGAGCTTGTTGGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: LFISMKASLQPK*VLRTPVSLLVT Trigger: GGTCACCAACAAGCTCACAGGGGTTCTTAATACCCACTTGGGTTGCAGGCTGGCCTTCATTGAAATGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||
| CDS CAA 72 bp | GTCTTTCAGTGCCTCGTCAATCTTTTGCAGTTCCTTTaGGATTTTTGTCATGGCTTGGATAATGATGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VFQCLVNLLQFL*DFCHGLDNDVT Trigger: TGTGACATCATTATCCAAGCCATGACAAAAATCCAAAAGGAACTGCAAAAGATTGACGAGGCACTGAAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068293.4 ENSMUST00000111894.2 ENSMUST00000203468.2 |
||