Pregenerated sensors for SMCHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024054Ensembl transcript IDs: ENSMUST00000127430.2, ENSMUST00000233839.2, ENSMUST00000233872.2
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTCTaGAAGTTGAATAGCTTCAATGGCTTCCAGGCCCATTTGGAGGAA | + |
Preference number: 1 (lower is better) Translates to: TTAMTPGNLCCPMRF*KLNSFNGFQAHLEE Trigger: TTCCTCCAAATGGGCCTGGAAGCCATTGAAGCTATTCAACTTTCAGAATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR TCA 90 bp | CTCATGAACATCCTTGGAGTCGATAGGCTTGCTTATCATTCTGGCTaGTTGCCCAACAAAGAAAACAGCCTGTTTGCCTCCAACACCAAA | + |
Preference number: 1 (lower is better) Translates to: LMNILGVDRLAYHSG*LPNKENSLFASNTK Trigger: TTTGGTGTTGGAGGCAAACAGGCTGTTTTCTTTGTTGGGCAATCAGCCAGAATGATAAGCAAGCCTATCGACTCCAAGGATGTTCATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233872.2 |
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3UTR-3UTR TCA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAAGTCCCAGGGCTGGGATaGCCACCACTGGGTAAAAGT | + |
Preference number: 2 (lower is better) Translates to: SNMFMIMLRSRKLSSGQEVPGLG*PPLGKS Trigger: ACTTTTACCCAGTGGTGGTCATCCCAGCCCTGGGAC...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR-3UTR GCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACGTAAAAGTGTACATTTaGAAGCCAGCCACCGACGGG | + |
Preference number: 2 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHVKVYI*KPATDG Trigger: CCCGTCGGTGGCTGGCTTGCAAATGTACACTTTTAC...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR-3UTR CCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACGCTTCCAGGCCCATTTaGAGGAACAGGAAATTCTTG | + |
Preference number: 2 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHASRPI*RNRKFL Trigger: CAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGC...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR-3UTR TCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACTGCCCCATGAGATTCTaGAAGTTGAATAGCTTCAAT | + |
Preference number: 2 (lower is better) Translates to: RTQSLGYPILTNVFVYLNCPMRF*KLNSFN Trigger: ATTGAAGCTATTCAACTTTCAGAATCTCATGGGGCA...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR-3UTR GCA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCAGGAACAGGAAATTCTTaGCAGGATTATCATAGTCTT | + |
Preference number: 2 (lower is better) Translates to: HILLIYRIQSLGCPITNSGTGNS*QDYHSL Trigger: AAGACTATGATAATCCTGGCAAGAATTTCCTGTTCC...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR GCA 72 bp | GGCTGGGATGACCACCACTGGGTAAAAGTGTACATTTaGAAGCCAGCCACCGACGGGCCCAACGACTGCAAT | + |
Preference number: 3 (lower is better) Translates to: GWDDHHWVKVYI*KPATDGPNDCN Trigger: ATTGCAGTCGTTGGGCCCGTCGGTGGCTGGCTTGCAAATGTACACTTTTACCCAGTGGTGGTCATCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR TCA 72 bp | GTTGTCTTCAGGGCAGGAAACGTCCCAGGGCTGGGATaGCCACCACTGGGTAAAAGTGTACATTTGCAAGCC | + |
Preference number: 3 (lower is better) Translates to: VVFRAGNVPGLG*PPLGKSVHLQA Trigger: GGCTTGCAAATGTACACTTTTACCCAGTGGTGGTCATCCCAGCCCTGGGACGTTTCCTGCCCTGAAGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR-3UTR CAA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAAGGTAAAAGTGTACATTaGCAAGCCAGCCACCGACGG | + |
Preference number: 3 (lower is better) Translates to: SNMFMIMLRSRKLSSGQEGKSVH*QASHRR Trigger: CCGTCGGTGGCTGGCTTGCAAATGTACACTTTTACC...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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3UTR TCA 72 bp | ATCCTTGGAGTCGATAGGCTTGCTTATCATTCTGGCTaGTTGCCCAACAAAGAAAACAGCCTGTTTGCCTCC | + |
Preference number: 3 (lower is better) Translates to: ILGVDRLAYHSG*LPNKENSLFAS Trigger: GGAGGCAAACAGGCTGTTTTCTTTGTTGGGCAATCAGCCAGAATGATAAGCAAGCCTATCGACTCCAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233872.2 |
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3UTR GCA 72 bp | CAATCTTTGGTGAGTGACAAAGTGACTCATTACACCTaGGCACAGGAGTCATTCCGAGTTTCTGCTCTATTC | + |
Preference number: 3 (lower is better) Translates to: QSLVSDKVTHYT*AQESFRVSALF Trigger: GAATAGAGCAGAAACTCGGAATGACTCCTGTGCGCAGGTGTAATGAGTCACTTTGTCACTCACCAAAGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233839.2 |
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3UTR-3UTR CAA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTGGCTTCCAGGCCCATTaGGAGGAACAGGAAATTCTT | + |
Preference number: 3 (lower is better) Translates to: CRIKAKCCCISYLYTGYSGFQAH*EEQEIL Trigger: AAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCC...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTGGTTCCATGGCAATCTaGACTTCACCTCCCGTCGCA | + |
Preference number: 4 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIGSMAI*TSPPVA Trigger: TGCGACGGGAGGTGAAGTTCAGATTGCCATGGAACC...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTGTGCCTGGGGTTCCATaGCAATCTGAACTTCACCTC | + |
Preference number: 4 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIVPGVP*QSELHL Trigger: GAGGTGAAGTTCAGATTGCCATGGAACCCCAGGCAC...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTCTCCTTCGTAAGCGCTaGCATTTGTTGCTGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: DGPNDCNDPRKFVLPHEILLRKR*HLLLLL Trigger: AAGAAGCAGCAACAAATGGCAGCGCTTACGAAGGAG...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTGCCCAGTTGTTAAGCTaGTTAGAGGTCATTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIAQLLS*LEVIPL Trigger: AAGAGGAATGACCTCTAAGCAGCTTAACAACTGGGC...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTAAAGCCTTTAATGGTTaGTACTACAGTGCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIKAFNG*YYSANQ Trigger: CTGGTTGGCACTGTAGTAGCAACCATTAAAGGCTTT...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTGCCTTCTATTCTGTCTaGTGGATTCTCTTCTCATTC | + |
Preference number: 4 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIAFYSV*WILFSF Trigger: GAATGAGAAGAGAATCCACCAGACAGAATAGAAGGC...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTTTCTTTGACCCTCCATaGCTTGTCCCTGGGAGTTTC | + |
Preference number: 4 (lower is better) Translates to: SFNGFQAHLEEQEILARIFFDPP*LVPGSF Trigger: GAAACTCCCAGGGACAAGTCATGGAGGGTCAAAGAA...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCTGGTGGCCGGCTCATaGCACTGGACAGCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHLVAGS*HWTAST Trigger: TGTGGAAGCTGTCCAGTGGCATGAGCCGGCCACCAG...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTACAACTATTTCTCCTTaGAGCTCTTGGCCCATCTGC | + |
Preference number: 4 (lower is better) Translates to: SFNGFQAHLEEQEILARITTISP*SSWPIC Trigger: GCAGATGGGCCAAGAGCTTCAAGGAGAAATAGTTGT...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTGGTGATTTTCAAGTTTaGGCTGTCAAGGCCATCTCC | + |
Preference number: 4 (lower is better) Translates to: SFNGFQAHLEEQEILARIGDFQV*AVKAIS Trigger: GGAGATGGCCTTGACAGCTCAAACTTGAAAATCACC...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | TTATCATTCTGGCTGATTGCCCAACAAAGAAAACAGCCTGTTTGCCTCCAACACTGGCCGGACATACCCTaGGTGATCAGCAAAGGATTC | + |
Preference number: 4 (lower is better) Translates to: LSFWLIAQQRKQPVCLQHWPDIP*VISKGF Trigger: GAATCCTTTGCTGATCACTCAGGGTATGTCCGGCCA...GTGTTGGAGGCAAACAGGCTGTTTTCTTTGTTGGGCAATCAGCCAGAATGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233872.2 |
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CDS-3UTR TCA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTCACCAGCAGCTTCTTTaGCCCTCCATGACTTGTCCC | + |
Preference number: 4 (lower is better) Translates to: LGCPITNSYRTQSLGYPIHQQLL*PSMTCP Trigger: GGGACAAGTCATGGAGGGTCAAAGAAGCTGCTGGTG...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTAGTTGGCCTCCAAGGTaGTTTTCAAGTTTGAGCTGT | + |
Preference number: 4 (lower is better) Translates to: SFNGFQAHLEEQEILARISWPPR*FSSLSC Trigger: ACAGCTCAAACTTGAAAATCACCTTGGAGGCCAACT...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCCCAAGACCACACACTaGTTTGGTACTGGAGCTCCG | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHPKTTH*FGTGAP Trigger: CGGAGCTCCAGTACCAAAGCAGTGTGTGGTCTTGGG...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTGTGGACGATCAGCTTTaGTTGTGCTGTTATGTTGTC | + |
Preference number: 4 (lower is better) Translates to: SFNGFQAHLEEQEILARIVDDQL*LCCYVV Trigger: GACAACATAACAGCACAACCAAAGCTGATCGTCCAC...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACTTCTGCATTTGCTGGTaGCCGGCTCATGCCACTGGA | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHFCICW*PAHATG Trigger: TCCAGTGGCATGAGCCGGCCACCAGCAAATGCAGAA...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTGCCGGCTCATGCCACTaGACAGCTTCCACATTTTCA | + |
Preference number: 4 (lower is better) Translates to: LGCPITNSYRTQSLGYPIAGSCH*TASTFS Trigger: TGAAAATGTGGAAGCTGTCCAGTGGCATGAGCCGGC...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTTTAAAATTCTTGCCCTaGCAAGAGTTAACTGGACCT | + |
Preference number: 4 (lower is better) Translates to: SFNGFQAHLEEQEILARILKFLP*QELTGP Trigger: AGGTCCAGTTAACTCTTGCCAGGGCAAGAATTTTAA...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATACACTGCTTTGGTACTaGAGCTCCGAAGACCATTCC | + |
Preference number: 4 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYTLLWY*SSEDHS Trigger: GGAATGGTCTTCGGAGCTCCAGTACCAAAGCAGTGT...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCGGACATACCCTGAGTaGTCACTTTCAAAGTCACCT | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHRTYPE*SLSKSP Trigger: AGGTGACTTTGAAAGTGATCACTCAGGGTATGTCCG...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAACGTCTTTTCAACAGGTaGCACATCTTTACAGCTAGG | + |
Preference number: 4 (lower is better) Translates to: SNMFMIMLRSRKLSSGQERLFNR*HIFTAR Trigger: CCTAGCTGTAAAGATGTGTCACCTGTTGAAAAGACG...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAAAGCTCTTGGCCCATCTaGACTGTTTTTCCTCCTTTT | + |
Preference number: 4 (lower is better) Translates to: SNMFMIMLRSRKLSSGQESSWPI*TVFPPF Trigger: AAAAGGAGGAAAAACAGTGCAGATGGGCCAAGAGCT...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAACTCTGCAAGAGCAAATaGCAAAGGATTCTGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: SNMFMIMLRSRKLSSGQELCKSK*QRILSF Trigger: GAAGGACAGAATCCTTTGCCATTTGCTCTTGCAGAG...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACGGACTCTTTCAGCTCTaGCCAGTCCATAAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: RTQSLGYPILTNVFVYLNGLFQL*PVHKQQ Trigger: CTGCTGCTTATGGACTGGCCAGAGCTGAAAGAGTCC...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCCACAAGCTGCTTGTTaGCATCGAAGAGACTTCTGT | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHPQAAC*HRRDFC Trigger: ACAGAAGTCTCTTCGATGCCAACAAGCAGCTTGTGG...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | GTGGATTCTCTTCTCATTCTTTTAGTAGGGATTGGGCACTCTGTCACCTCAATCATCTCGGGCAAAGACTaGATTTCCAAAGGGCTTAAA | + |
Preference number: 4 (lower is better) Translates to: VDSLLILLVGIGHSVTSIISGKD*ISKGLK Trigger: TTTAAGCCCTTTGGAAATCCAGTCTTTGCCCGAGAT...GATTGAGGTGACAGAGTGCCCAATCCCTACTAAAAGAATGAGAAGAGAATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233839.2 |
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CDS-3UTR CCA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAACCGAAGTTTGTCCATTaGCGGAGCTTTATTCTGAAG | + |
Preference number: 4 (lower is better) Translates to: SNMFMIMLRSRKLSSGQEPKFVH*RSFILK Trigger: CTTCAGAATAAAGCTCCGCCAATGGACAAACTTCGG...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATCCCATTCTATTGCTaGAAATGTTGCCCAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: RTQSLGYPILTNVFVYLNIPFYC*KCCPGA Trigger: GGCCCCTGGGCAACATTTTCAGCAATAGAATGGGAT...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | GTGGATTCTCTTCTCATTCTTTTAGTAGGGATTGGGCACTCTGTCACCTCAATCGCAGTGCGATACTGCTaGATAAGATCTCTTTTCTAT | + |
Preference number: 4 (lower is better) Translates to: VDSLLILLVGIGHSVTSIAVRYC*IRSLFY Trigger: ATAGAAAAGAGATCTTATTCAGCAGTATCGCACTGC...GATTGAGGTGACAGAGTGCCCAATCCCTACTAAAAGAATGAGAAGAGAATCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233839.2 |
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CDS-3UTR GCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACTCCATTATCTACCACTaGGACAGCAGGTTTTCCTTG | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHSIIYH*DSRFSL Trigger: CAAGGAAAACCTGCTGTCGCAGTGGTAGATAATGGA...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTGTTGCCCAGGGGCCTTaGTTTTTAGTGGGAAGATCT | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLVAQGP*FLVGRS Trigger: AGATCTTCCCACTAAAAAGCAAGGCCCCTGGGCAAC...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTGTCCCTGGGAGTTTCTaGATTGCTTCCCCCTTTTTG | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLVPGSF*IASPFL Trigger: CAAAAAGGGGGAAGCAATGCAGAAACTCCCAGGGAC...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTTCATATAAGAAGGGATaGTACCGGATAACCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: LGCPITNSYRTQSLGYPISYKKG*YRITPS Trigger: GGAAGGGGTTATCCGGTACCATCCCTTCTTATATGA...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTTGCAGGCAAGCAGCGTaGCTACTGGGAAGTAACTTG | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSCRQAA*LLGSNL Trigger: CAAGTTACTTCCCAGTAGCCACGCTGCTTGCCTGCA...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTCTTTTCTATAATGATTaGCTGCATCCAGATTATCCA | + |
Preference number: 4 (lower is better) Translates to: SFNGFQAHLEEQEILARILFYND*LHPDYP Trigger: TGGATAATCTGGATGCAGCCAATCATTATAGAAAAG...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
||
CDS-3UTR TCA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCATCCACAACTTCCACCTaGAATGGGAAAGCTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: HILLIYRIQSLGCPITNSSTTST*NGKAVP Trigger: TGGAACAGCTTTCCCATTTCAGGTGGAAGTTGTGGA...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAAAAAAGTGCTTCAATATaGGTTGTCTGTTGTGTCGCA | + |
Preference number: 4 (lower is better) Translates to: SNMFMIMLRSRKLSSGQEKSASI*VVCCVA Trigger: TGCGACACAACAGACAACTCATATTGAAGCACTTTT...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
||
CDS-3UTR GCA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCATGTCACTGTTCAAACTaGGTGGTACTGGTAATGGCC | + |
Preference number: 4 (lower is better) Translates to: HILLIYRIQSLGCPITNSCHCSN*VVLVMA Trigger: GGCCATTACCAGTACCACGCAGTTTGAACAGTGACA...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCTTGACCAGTTGGCCTaGTTTGTATATTTTCCCATC | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHLDQLA*FVYFPI Trigger: GATGGGAAAATATACAAAGCAGGCCAACTGGTCAAG...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTACAACTAAAGGTTTCTaGATTTGCTGGTGGCCGGCT | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLTTKGF*ICWWPA Trigger: AGCCGGCCACCAGCAAATGCAGAAACCTTTAGTTGT...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
||
CDS-3UTR CCA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATATCTCGGGCAAAGACTaGATTTCCAAAGGGCTTAAA | + |
Preference number: 4 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYISGKD*ISKGLK Trigger: TTTAAGCCCTTTGGAAATCCAGTCTTTGCCCGAGAT...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
||
CDS-3UTR TCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACCTTCAACGTGAGCCTTaGACTCAAAACTATCAGACG | + |
Preference number: 4 (lower is better) Translates to: RTQSLGYPILTNVFVYLNLQREP*TQNYQT Trigger: CGTCTGATAGTTTTGAGTTCAAGGCTCACGTTGAAG...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGCCGTCTCCTTCAACGTaGGCCTTGAACTCAAAACTA | + |
Preference number: 4 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQPSPST*ALNSKL Trigger: TAGTTTTGAGTTCAAGGCTCACGTTGAAGGAGACGG...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGCCTCATCCTGATGTTTaGTCTGGATCGCCTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQPHPDV*SGSPFA Trigger: AGCAAAAGGCGATCCAGATCAAACATCAGGATGAGG...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTCAAGTAACCTCATCCTaGTGTTTGATCTGGATCGCC | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSQVTSS*CLIWIA Trigger: GGCGATCCAGATCAAACATCAGGATGAGGTTACTTG...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTTGTCCTATCCAGCTTTaGAATGGGCACAGTTTTTAT | + |
Preference number: 4 (lower is better) Translates to: LGCPITNSYRTQSLGYPICPIQL*NGHSFY Trigger: ATAAAAACTGTGCCCATTGCAAAGCTGGATAGGACA...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACTCTATCAGGGAGCCTTaGCATTTCATCTTCTACATA | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHSIREP*HFIFYI Trigger: TATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGA...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATAAACTGGATACAATATaGTCCCACCTTGTTAGGGAT | + |
Preference number: 4 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYKLDTI*SHLVRD Trigger: ATCCCTAACAAGGTGGGAGCATATTGTATCCAGTTT...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTATGTCACTTGCCAGATaGCAAGAGATAACCATGGCA | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLMSLAR*QEITMA Trigger: TGCCATGGTTATCTCTTGGCATCTGGCAAGTGACAT...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACACAGTCCATGTCACTTaGCAGATGCCAAGAGATAAC | + |
Preference number: 4 (lower is better) Translates to: RTQSLGYPILTNVFVYLNTVHVT*QMPRDN Trigger: GTTATCTCTTGGCATCTGGCAAGTGACATGGACTGT...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTTCCATGACTTGTCCCTaGGAGTTTCTGCATTGCTTC | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSSMTCP*EFLHCF Trigger: GAAGCAATGCAGAAACTCCCAGGGACAAGTCATGGA...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATCAGAGGAATATTAAATaGAACTCCAACACGGAAAGG | + |
Preference number: 4 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYQRNIK*NSNTER Trigger: CCTTTCCGTGTTGGAGTTCCATTTAATATTCCTCTG...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTGCGTTTAGTGTAGTTTaGAAGAGTACACAACCTTCT | + |
Preference number: 4 (lower is better) Translates to: LGCPITNSYRTQSLGYPIAFSVV*KSTQPS Trigger: AGAAGGTTGTGTACTCTTCCAAACTACACTAAACGC...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCATGGTACGTCACCTTTTaGCCTTCTATTCTGTCTGGT | + |
Preference number: 4 (lower is better) Translates to: HILLIYRIQSLGCPITNSWYVTF*PSILSG Trigger: ACCAGACAGAATAGAAGGCCAAAAGGTGACGTACCA...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACTTTCTTCAGATGAAATaGCAATTGTCTGACACACAG | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHFLQMK*QLSDTQ Trigger: CTGTGTGTCAGACAATTGGCATTTCATCTGAAGAAA...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACAGAAAACAGCCTGTTTaGCTCCAACACCAAAATAGG | + |
Preference number: 4 (lower is better) Translates to: RTQSLGYPILTNVFVYLNRKQPV*LQHQNR Trigger: CCTATTTTGGTGTTGGAGGCAAACAGGCTGTTTTCT...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTTATTTCATCATACAGTaGCTGGGGTTCCATGGCAAT | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLYFIIQ*LGFHGN Trigger: ATTGCCATGGAACCCCAGGCACTGTATGATGAAATA...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTTTCCACTTGAAGTGTaGAGTATGACTTTAAGTTCC | + |
Preference number: 4 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYFPLEV*SMTLSS Trigger: GGAACTTAAAGTCATACTGCACACTTCAAGTGGAAA...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAATCCTGCATAGGTATCTaGATTACTTTCATTCAATAC | + |
Preference number: 4 (lower is better) Translates to: SNMFMIMLRSRKLSSGQESCIGI*ITFIQY Trigger: GTATTGAATGAAAGTAATGCAGATACCTATGCAGGA...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACAAGGTCCAATGGCTTTaGCTGTACTTATTTCATTTC | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHKVQWL*LYLFHF Trigger: GAAATGAAATAAGTACAGCCAAAGCCATTGGACCTT...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACAAACGAAAACTTTTCTaGCTTGCCCTCTTTAACAGA | + |
Preference number: 4 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHKRKLF*LALFNR Trigger: TCTGTTAAAGAGGGCAAGCCAGAAAAGTTTTCGTTT...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TCTCTTCTCATTCTTTTAGTAGGGATTGGGCACTCTGTCACCTCAATCTTTGGTCTTTTCTATAATGATTaGCTGCATCCAGATTATCCA | + |
Preference number: 4 (lower is better) Translates to: SLLILLVGIGHSVTSIFGLFYND*LHPDYP Trigger: TGGATAATCTGGATGCAGCCAATCATTATAGAAAAG...ACCAAAGATTGAGGTGACAGAGTGCCCAATCCCTACTAAAAGAATGAGAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233839.2 |
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CDS-3UTR TCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTTCATCATTTGTAATGTaGGCAGAATCAGCTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLSSFVM*AESAGF Trigger: AAAGCCAGCTGATTCTGCTCACATTACAAATGATGA...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTATCATTCTGGCTGATTaGCCAACAAAGAAAACAGCC | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSIILAD*PTKKTA Trigger: GGCTGTTTTCTTTGTTGGGCAATCAGCCAGAATGAT...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTAGTGAATATGTCCCCTaGTATAAAAGAGGCATCTTG | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLSEYVP*YKRGIL Trigger: CAAGATGCCTCTTTTATAGCAGGGGACATATTCACT...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTTCAACTATAACCTGTTaGCTGCTTAGAATATTTGTC | + |
Preference number: 4 (lower is better) Translates to: LGCPITNSYRTQSLGYPISTITC*LLRIFV Trigger: GACAAATATTCTAAGCAGCCAACAGGTTATAGTTGA...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTTCTTTTAGTAGGGATTaGGCACTCTGTCACCTCAAT | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSSFSRD*ALCHLN Trigger: ATTGAGGTGACAGAGTGCCCAATCCCTACTAAAAGA...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTCAATATCAATATTGTTaGAAGGTCCAATGGCTTTGG | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLQYQYC*KVQWLW Trigger: CCAAAGCCATTGGACCTTTCAACAATATTGATATTG...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTCATTTCCCTCCATGCTaGCTGATATGTGAAATGATT | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSHFPPC*LICEMI Trigger: AATCATTTCACATATCAGTCAGCATGGAGGGAAATG...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGTCAATCTTTGGTGAGTaGCAAAGTGACTCATTACAC | + |
Preference number: 4 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQSIFGE*QSDSLH Trigger: GTGTAATGAGTCACTTTGTCACTCACCAAAGATTGA...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGTCATCTGTTTTATGCTaGTGGTTTGAAGGTAGTAGC | + |
Preference number: 4 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQSSVLC*WFEGSS Trigger: GCTACTACCTTCAAACCAGCAGCATAAAACAGATGA...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACGTGAGCAGAATCAGCTaGCTTTCTGTTTCTAATATA | + |
Preference number: 4 (lower is better) Translates to: RTQSLGYPILTNVFVYLNVSRIS*LSVSNI Trigger: TATATTAGAAACAGAAAGCCAGCTGATTCTGCTCAC...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTGTCTTGACCAGTTaGCCTGCTTTGTATATTTTC | + |
Preference number: 4 (lower is better) Translates to: RTQSLGYPILTNVFVYLNIVLTS*PALYIF Trigger: GAAAATATACAAAGCAGGCCAACTGGTCAAGACAAT...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCACACAATTCGGGCCTTTaGTTATTCCTTCATAATGTA | + |
Preference number: 4 (lower is better) Translates to: HILLIYRIQSLGCPITNSHNSGL*LFLHNV Trigger: TACATTATGAAGGAATAACCAAAGGCCCGAATTGTG...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTATCTTTCACAGATGTTaGTACTTGCACATCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSIFHRC*YLHIRK Trigger: CTTCCTGATGTGCAAGTACCAACATCTGTGAAAGAT...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTTCTGTTTTATGCTGCTaGTTTGAAGGTAGTAGCCTT | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSSVLCC*FEGSSL Trigger: AAGGCTACTACCTTCAAACCAGCAGCATAAAACAGA...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCAATCATGAAATCAAACTaGATACAATATGCTCCCACC | + |
Preference number: 4 (lower is better) Translates to: HILLIYRIQSLGCPITNSIMKSN*IQYAPT Trigger: GGTGGGAGCATATTGTATCCAGTTTGATTTCATGAT...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTTTTGCTTCTTCAGCTTaGCATTTCATTTCATCCACA | + |
Preference number: 4 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLFASSA*HFISST Trigger: TGTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAA...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR TCA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTTTGTCATGCTTTTCATaGCAATCCTTCAGCCATAAA | + |
Preference number: 4 (lower is better) Translates to: CRIKAKCCCISYLYTGYSLSCFS*QSFSHK Trigger: TTTATGGCTGAAGGATTGTCATGAAAAGCATGACAA...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR GCA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCATTATCATCTGTTTTATaGTGCTGGTTTGAAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: HILLIYRIQSLGCPITNSLSSVL*CWFEGS Trigger: ACTACCTTCAAACCAGCAGCATAAAACAGATGATAA...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CCA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGTATCCAGCTTTGCAATaGGCACAGTTTTTATTTCAT | + |
Preference number: 4 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQYPALQ*AQFLFH Trigger: ATGAAATAAAAACTGTGCCCATTGCAAAGCTGGATA...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTATCAAGGGGCAACACTaGCTGGCGACCTTGAGTTTC | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIIKGQH*LATLSF Trigger: GAAACTCAAGGTCGCCAGCAAGTGTTGCCCCTTGAT...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTAGACCACACACTGCTTaGGTACTGGAGCTCCGAAGA | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIRPHTA*VLELRR Trigger: TCTTCGGAGCTCCAGTACCAAAGCAGTGTGTGGTCT...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 90 bp | TGTGATACTGAGGCGCAGGTCTTTGACCAAGGTCCTGCTGGCAATTaGACGGACATTAGAAACAGCTGGGGTAGCTGGTTGGCTGTCAGG | + |
Preference number: 5 (lower is better) Translates to: CDTEAQVFDQGPAGN*TDIRNSWGSWLAVR Trigger: CCTGACAGCCAACCAGCTACCCCAGCTGTTTCTAATGTCCGTTCAATTGCCAGCAGGACCTTGGTCAAAGACCTGCGCCTCAGTATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTCTATTGCTGAAAATGTaGCCCAGGGGCCTTGCTTTT | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEILLLKM*PRGLAF Trigger: AAAAGCAAGGCCCCTGGGCAACATTTTCAGCAATAG...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTCCCGAAGTTTGTCCATaGGCGGAGCTTTATTCTGAA | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIPEVCP*AELYSE Trigger: TTCAGAATAAAGCTCCGCCAATGGACAAACTTCGGG...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | GGCCAGTCCATAAGCAGCAGCTTGGTTGGAGGTCCAGAAACCAGTTaGACGCGCAGAAAGTCAGAAAACTCTCGCCAAGTAAAACACAGA | + |
Preference number: 5 (lower is better) Translates to: GQSISSSLVGGPETS*TRRKSENSRQVKHR Trigger: TCTGTGTTTTACTTGGCGAGAGTTTTCTGACTTTCTGCGCGTGCAACTGGTTTCTGGACCTCCAACCAAGCTGCTGCTTATGGACTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | AATGGACTCTTTCAGCTCTGGCCAGTCCATAAGCAGCAGCTTGGTTaGAGGTCCAGAAACCAGTTGCACGCGCAGAAAGTCAGAAAACTC | + |
Preference number: 5 (lower is better) Translates to: NGLFQLWPVHKQQLG*RSRNQLHAQKVRKL Trigger: GAGTTTTCTGACTTTCTGCGCGTGCAACTGGTTTCTGGACCTCCAACCAAGCTGCTGCTTATGGACTGGCCAGAGCTGAAAGAGTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | CTGCTGGCAATTGAACGGACATTAGAAACAGCTGGGGTAGCTGGTTaGCTGTCAGGAACCAACTTCATAGGCTGGTTGGGGAGAACATCA | + |
Preference number: 5 (lower is better) Translates to: LLAIERTLETAGVAG*LSGTNFIGWLGRTS Trigger: TGATGTTCTCCCCAACCAGCCTATGAAGTTGGTTCCTGACAGCCAACCAGCTACCCCAGCTGTTTCTAATGTCCGTTCAATTGCCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTGGTTGTGCTGTTATGTaGTCTGACTCATCCACAACT | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIGCAVM*SDSSTT Trigger: AGTTGTGGATGAGTCAGACAACATAACAGCACAACC...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTAGTGGACGATCAGCTTaGGTTGTGCTGTTATGTTGT | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEISGRSA*VVLLCC Trigger: ACAACATAACAGCACAACCAAAGCTGATCGTCCACT...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | CTTTGGTACTGGAGCTCCGAAGACCATTCCCCGAAGTTTGTCCATTaGCGGAGCTTTATTCTGAAGGCCCCCAAACTTCCCATTACTTCT | + |
Preference number: 5 (lower is better) Translates to: LWYWSSEDHSPKFVH*RSFILKAPKLPITS Trigger: AGAAGTAATGGGAAGTTTGGGGGCCTTCAGAATAAAGCTCCGCCAATGGACAAACTTCGGGGAATGGTCTTCGGAGCTCCAGTACCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTAACTTCATAGGCTGGTaGGGGAGAACATCAACTATA | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEINFIGW*GRTSTI Trigger: TATAGTTGATGTTCTCCCCAACCAGCCTATGAAGTT...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTGGGTCTCTTTTAACTTaGCTTCTTCAGCTTGGCATT | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEIGSLLT*LLQLGI Trigger: AATGCCAAGCTGAAGAAGCAAAGTTAAAAGAGACCC...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | ACAGCTGGGGTAGCTGGTTGGCTGTCAGGAACCAACTTCATAGGCTaGTTGGGGAGAACATCAACTATAACCTGTTGGCTGCTTAGAATA | + |
Preference number: 5 (lower is better) Translates to: TAGVAGWLSGTNFIG*LGRTSTITCWLLRI Trigger: TATTCTAAGCAGCCAACAGGTTATAGTTGATGTTCTCCCCAACCAGCCTATGAAGTTGGTTCCTGACAGCCAACCAGCTACCCCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | CCGTCCATTCCAAAAACACTCAAAGATCGGCCTCTTCCCTCGAGCTaGTTTCTCGGATATGAAACAGTCATCATCGTCGTCTTCATCCTT | + |
Preference number: 5 (lower is better) Translates to: PSIPKTLKDRPLPSS*FLGYETVIIVVFIL Trigger: AAGGATGAAGACGACGATGATGACTGTTTCATATCCGAGAAAGCAGCTCGAGGGAAGAGGCCGATCTTTGAGTGTTTTTGGAATGGACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | CCTATCCAGCTTTGCAATGGGCACAGTTTTTATTTCATCATACAGTaGCTGGGGTTCCATGGCAATCTGAACTTCACCTCCCGTCGCATA | + |
Preference number: 5 (lower is better) Translates to: PIQLCNGHSFYFIIQ*LGFHGNLNFTSRRI Trigger: TATGCGACGGGAGGTGAAGTTCAGATTGCCATGGAACCCCAGGCACTGTATGATGAAATAAAAACTGTGCCCATTGCAAAGCTGGATAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | GCATCAGTGGTTAGGGTAACCACACAGTCCATGTCACTTGCCAGATaGCAAGAGATAACCATGGCAGCTCGATCATCTTCAATTTGTGCT | + |
Preference number: 5 (lower is better) Translates to: ASVVRVTTQSMSLAR*QEITMAARSSSICA Trigger: AGCACAAATTGAAGATGATCGAGCTGCCATGGTTATCTCTTGGCATCTGGCAAGTGACATGGACTGTGTGGTTACCCTAACCACTGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | ATCGCCTTTTGCTCCTCTACACTAAAGATCTGCAGGCAAGCAGCGTaGCTACTGGGAAGTAACTTGATCGTCTTTTCAACAGGTGACACA | + |
Preference number: 5 (lower is better) Translates to: IAFCSSTLKICRQAA*LLGSNLIVFSTGDT Trigger: TGTGTCACCTGTTGAAAAGACGATCAAGTTACTTCCCAGTAGCCACGCTGCTTGCCTGCAGATCTTTAGTGTAGAGGAGCAAAAGGCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | CTGCTGAATAAGATCTATTTGTTTCCCCAAGACCACACACTGCTTTaGTACTGGAGCTCCGAAGACCATTCCCCGAAGTTTGTCCATTGG | + |
Preference number: 5 (lower is better) Translates to: LLNKIYLFPQDHTLL*YWSSEDHSPKFVHW Trigger: CCAATGGACAAACTTCGGGGAATGGTCTTCGGAGCTCCAGTACCAAAGCAGTGTGTGGTCTTGGGGAAACAAATAGATCTTATTCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTCAGATGAAATGCCAATaGTCTGACACACAGAAGCGC | + |
Preference number: 5 (lower is better) Translates to: SFNGFQAHLEEQEILARIQMKCQ*SDTQKR Trigger: GCGCTTCTGTGTGTCAGACAATTGGCATTTCATCTG...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GACGGGCCCAACGACTGCAATGACCCCAGGAAATTTGTGCTGCCCCATGAGATTTGTATTTCCCTTAGGTaGATAATCTTAGGTGTCTTC | + |
Preference number: 5 (lower is better) Translates to: DGPNDCNDPRKFVLPHEICISLR*IILGVF Trigger: GAAGACACCTAAGATTATCAACCTAAGGGAAATACA...AATCTCATGGGGCAGCACAAATTTCCTGGGGTCATTGCAGTCGTTGGGCCCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | CTTCTCATTCTTTTAGTAGGGATTGGGCACTCTGTCACCTCAATCTTTGGTGAGATCAAGGGGCAACACTaGCTGGCGACCTTGAGTTTC | + |
Preference number: 5 (lower is better) Translates to: LLILLVGIGHSVTSIFGEIKGQH*LATLSF Trigger: GAAACTCAAGGTCGCCAGCAAGTGTTGCCCCTTGAT...CTCACCAAAGATTGAGGTGACAGAGTGCCCAATCCCTACTAAAAGAATGAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233839.2 |
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CDS TCA 90 bp | TGCAGTATGACTTTAAGTTCCACCAGCAGCTTCTTTGACCCTCCATaGCTTGTCCCTGGGAGTTTCTGCATTGCTTCCCCCTTTTTGTTT | + |
Preference number: 5 (lower is better) Translates to: CSMTLSSTSSFFDPP*LVPGSFCIASPFLF Trigger: AAACAAAAAGGGGGAAGCAATGCAGAAACTCCCAGGGACAAGTCATGGAGGGTCAAAGAAGCTGCTGGTGGAACTTAAAGTCATACTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | CAATGGGCACAGTTTTTATTTCATCATACAGTGCCTGGGGTTCCATaGCAATCTGAACTTCACCTCCCGTCGCATACACTTCTCCATCAT | + |
Preference number: 5 (lower is better) Translates to: QWAQFLFHHTVPGVP*QSELHLPSHTLLHH Trigger: ATGATGGAGAAGTGTATGCGACGGGAGGTGAAGTTCAGATTGCCATGGAACCCCAGGCACTGTATGATGAAATAAAAACTGTGCCCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | GCTCTTATTATAGACACCTTTAACCTGCACAGTGTGTTCTCCCCTTaGAGCACAAACAGTGAACACCCCCAAATTAGCTCTGCCCTTATC | + |
Preference number: 5 (lower is better) Translates to: ALIIDTFNLHSVFSP*STNSEHPQISSALI Trigger: GATAAGGGCAGAGCTAATTTGGGGGTGTTCACTGTTTGTGCTCCAAGGGGAGAACACACTGTGCAGGTTAAAGGTGTCTATAATAAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGCTTCAATGGCTTCCAGGCCCATTTGGAGGAACAGGAAATTCTTGCCAGGATTCTGGGAGTTTCTGCATaGCTTCCCCCTTTTTGTTTA | + |
Preference number: 5 (lower is better) Translates to: SFNGFQAHLEEQEILARILGVSA*LPPFCL Trigger: TAAACAAAAAGGGGGAAGCAATGCAGAAACTCCCAG...AATCCTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCCACCAGCAGCTTCTTaGACCCTCCATGACTTGTCC | + |
Preference number: 5 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHPPAAS*TLHDLS Trigger: GGACAAGTCATGGAGGGTCAAAGAAGCTGCTGGTGG...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACGTAAAACACAGATCCTaGGGTCCAGGAGGCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHVKHRS*GPGGPG Trigger: TCCAGGGCCTCCTGGACCCAAGGATCTGTGTTTTAC...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 90 bp | GGATGGTACCGGATAACCCCTTCCACTACACCGTCTCCTTCAACGTaGGCCTTGAACTCAAAACTATCAGACGCTGTGTTTATATACAAT | + |
Preference number: 5 (lower is better) Translates to: GWYRITPSTTPSPST*ALNSKLSDAVFIYN Trigger: ATTGTATATAAACACAGCGTCTGATAGTTTTGAGTTCAAGGCTCACGTTGAAGGAGACGGTGTAGTGGAAGGGGTTATCCGGTACCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 90 bp | AACACTCAAAGATCGGCCTCTTCCCTCGAGCTGCTTTCTCGGATATaGAACAGTCATCATCGTCGTCTTCATCCTTTAGCTTTGATGGAA | + |
Preference number: 5 (lower is better) Translates to: NTQRSASSLELLSRI*NSHHRRLHPLALME Trigger: TTCCATCAAAGCTAAAGGATGAAGACGACGATGATGACTGTTTCATATCCGAGAAAGCAGCTCGAGGGAAGAGGCCGATCTTTGAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | TCAATTCTTTCTTTCGTCGCCGTCAGTAGTGACTGGTCAACTGACTaGAGCAGGTACAGAGTGACTCCATCTTTAACAGTGTGGTCAAAA | + |
Preference number: 5 (lower is better) Translates to: SILSFVAVSSDWSTD*SRYRVTPSLTVWSK Trigger: TTTTGACCACACTGTTAAAGATGGAGTCACTCTGTACCTGCTGCAGTCAGTTGACCAGTCACTACTGACGGCGACGAAAGAAAGAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127430.2 ENSMUST00000233872.2 |
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CDS CCA 90 bp | TTTCACAAAGGGAAACTCAAGCGTCCTAACCTTCCCGATGAAGAGTaGGGTATCAGTGTCCTCCTCATTAAAGCCTTTAATGGTTGCTAC | + |
Preference number: 5 (lower is better) Translates to: FHKGKLKRPNLPDEE*GISVLLIKAFNGCY Trigger: GTAGCAACCATTAAAGGCTTTAATGAGGAGGACACTGATACCCCACTCTTCATCGGGAAGGTTAGGACGCTTGAGTTTCCCTTTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTTGTTGCCCAGGGGCCTaGCTTTTTAGTGGGAAGATC | + |
Preference number: 5 (lower is better) Translates to: LGCPITNSYRTQSLGYPICCPGA*LFSGKI Trigger: GATCTTCCCACTAAAAAGCAAGGCCCCTGGGCAACA...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATAGGTCCAGAAACCAGTaGCACGCGCAGAAAGTCAGA | + |
Preference number: 5 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYRSRNQ*HAQKVR Trigger: TCTGACTTTCTGCGCGTGCAACTGGTTTCTGGACCT...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | GAAGAGTGGGGTATCAGTGTCCTCCTCATTAAAGCCTTTAATGGTTaGTACTACAGTGCCAACCAGATCCATTCCAGTGTGATTACCATA | + |
Preference number: 5 (lower is better) Translates to: EEWGISVLLIKAFNG*YYSANQIHSSVITI Trigger: TATGGTAATCACACTGGAATGGATCTGGTTGGCACTGTAGTAGCAACCATTAAAGGCTTTAATGAGGAGGACACTGATACCCCACTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTACCATTCCCCGAAGTTaGTCCATTGGCGGAGCTTTA | + |
Preference number: 5 (lower is better) Translates to: LGCPITNSYRTQSLGYPITIPRS*SIGGAL Trigger: TAAAGCTCCGCCAATGGACAAACTTCGGGGAATGGT...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 90 bp | AAACTTACAGTGGACGATCAGCTTTGGTTGTGCTGTTATGTTGTCTaGCTCATCCACAACTTCCACCTGAAATGGGAAAGCTGTTCCATT | + |
Preference number: 5 (lower is better) Translates to: KLTVDDQLWLCCYVV*LIHNFHLKWESCSI Trigger: AATGGAACAGCTTTCCCATTTCAGGTGGAAGTTGTGGATGAGTCAGACAACATAACAGCACAACCAAAGCTGATCGTCCACTGTAAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | TGTCTTGTAAATTTTGACAGCCTATACACAGCCCAGTTGTTAAGCTaGTTAGAGGTCATTCCTCTTCCATTATCTACCACTGCGACAGCA | + |
Preference number: 5 (lower is better) Translates to: CLVNFDSLYTAQLLS*LEVIPLPLSTTATA Trigger: TGCTGTCGCAGTGGTAGATAATGGAAGAGGAATGACCTCTAAGCAGCTTAACAACTGGGCTGTGTATAGGCTGTCAAAATTTACAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | TGCTTATCATTCTGGCTGATTGCCCAACAAAGAAAACAGCCTGTTTaGCTCCAACACCAAAATAGGAAATGTCACTGTTCAAACTGCGTG | + |
Preference number: 5 (lower is better) Translates to: CLSFWLIAQQRKQPV*LQHQNRKCHCSNCV Trigger: CACGCAGTTTGAACAGTGACATTTCCTATTTTGGTGTTGGAGGCAAACAGGCTGTTTTCTTTGTTGGGCAATCAGCCAGAATGATAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | CATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACCAACTCATTGACCCTCCATGACTaGTCCCTGGGAGTTTCTGCA | + |
Preference number: 5 (lower is better) Translates to: HILLIYRIQSLGCPITNSLTLHD*SLGVSA Trigger: TGCAGAAACTCCCAGGGACAAGTCATGGAGGGTCAA...TGAGTTGGTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTTCTCCTTGAAGCTCTaGGCCCATCTGCACTGTTTT | + |
Preference number: 5 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYFSLKL*AHLHCF Trigger: AAAACAGTGCAGATGGGCCAAGAGCTTCAAGGAGAA...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACTTGGTACGTCACCTTTaGGCCTTCTATTCTGTCTGG | + |
Preference number: 5 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHLVRHL*AFYSVW Trigger: CCAGACAGAATAGAAGGCCAAAAGGTGACGTACCAA...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 90 bp | ATTAGATTGCGTATTACATCACCTGCTACCCAAGTAACCTCATCCTaGTGTTTGATCTGGATCGCCTTTTGCTCCTCTACACTAAAGATC | + |
Preference number: 5 (lower is better) Translates to: IRLRITSPATQVTSS*CLIWIAFCSSTLKI Trigger: GATCTTTAGTGTAGAGGAGCAAAAGGCGATCCAGATCAAACATCAGGATGAGGTTACTTGGGTAGCAGGTGATGTAATACGCAATCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | ATCTTGGAAAGAAACATGGCAGTAGCGGACATCTTTCACAGATGTTaGTACTTGCACATCAGGAAGGAGACCTTGTACCAAATGTTCTTT | + |
Preference number: 5 (lower is better) Translates to: ILERNMAVADIFHRC*YLHIRKETLYQMFF Trigger: AAAGAACATTTGGTACAAGGTCTCCTTCCTGATGTGCAAGTACCAACATCTGTGAAAGATGTCCGCTACTGCCATGTTTCTTTCCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | AGTTCATTTCGTAGCTGGGTCTCTTTTAACTTTGCTTCTTCAGCTTaGCATTTCATTTCATCCACAAGCTGCTTGTTGGCATCGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: SSFRSWVSFNFASSA*HFISSTSCLLASKR Trigger: TCTCTTCGATGCCAACAAGCAGCTTGTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAAGTTAAAAGAGACCCAGCTACGAAATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | ATGTGCAATCTTTCCCAAAATATCTCCACTGCGTTTAGTGTAGTTTaGAAGAGTACACAACCTTCTGGGCCTCTTTTTAAGCTCGTTCTG | + |
Preference number: 5 (lower is better) Translates to: MCNLSQNISTAFSVV*KSTQPSGPLFKLVL Trigger: CAGAACGAGCTTAAAAAGAGGCCCAGAAGGTTGTGTACTCTTCCAAACTACACTAAACGCAGTGGAGATATTTTGGGAAAGATTGCACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACACCAGTTGGCCTGCTTaGTATATTTTCCCATCCCAT | + |
Preference number: 5 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHTSWPA*YIFPSH Trigger: ATGGGATGGGAAAATATACAAAGCAGGCCAACTGGT...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TCTAATATGTTCATGATTATGCTGAGGAGCAGGAAGTTGTCTTCAGGGCAGGAATGTACCAAATGTTCTTaGTTCACCTCAGGAGTCCAA | + |
Preference number: 5 (lower is better) Translates to: SNMFMIMLRSRKLSSGQECTKCS*FTSGVQ Trigger: TTGGACTCCTGAGGTGAACAAAGAACATTTGGTACA...TTCCTGCCCTGAAGACAACTTCCTGCTCCTCAGCATAATCATGAACATATTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | TTTAACTTTGCTTCTTCAGCTTGGCATTTCATTTCATCCACAAGCTaGTTGTTGGCATCGAAGAGACTTCTGTACATAGTGATGGACTTG | + |
Preference number: 5 (lower is better) Translates to: FNFASSAWHFISSTS*LLASKRLLYIVMDL Trigger: CAAGTCCATCACTATGTACAGAAGTCTCTTCGATGCCAACAAGCAGCTTGTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAAGTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTCAGAGAGGAAGTGTCTaGATTGTCTTGACCAGTTGG | + |
Preference number: 5 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLQRGSV*IVLTSW Trigger: CCAACTGGTCAAGACAATCAAGACACTTCCTCTCTG...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATTTATAGACTGGTAGGTTaGGAGCACCTAGAAACTTAC | + |
Preference number: 5 (lower is better) Translates to: LGCPITNSYRTQSLGYPIYRLVG*EHLETY Trigger: GTAAGTTTCTAGGTGCTCCAAACCTACCAGTCTATA...AATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATGTTCCTGATACAGTaGACAGCCGAGGCTCAAAGA | + |
Preference number: 5 (lower is better) Translates to: RTQSLGYPILTNVFVYLNMFLIQ*TAEAQR Trigger: TCTTTGAGCCTCGGCTGTCAACTGTATCAGGAACAT...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTCGTAAGCGCTGCCATTaGTTGCTGCTTCTTAACATC | + |
Preference number: 5 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLRKRCH*LLLLNI Trigger: GATGTTAAGAAGCAGCAACAAATGGCAGCGCTTACG...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 90 bp | AAGAATAACCTTCAGATTAAAATTCTTGCCCTGGCAAGAGTTAACTaGACCTTTAGCTACGACACCTTGAATTACACAATTCGGGCCTTT | + |
Preference number: 5 (lower is better) Translates to: KNNLQIKILALARVN*TFSYDTLNYTIRAF Trigger: AAAGGCCCGAATTGTGTAATTCAAGGTGTCGTAGCTAAAGGTCCAGTTAACTCTTGCCAGGGCAAGAATTTTAATCTGAAGGTTATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGTCCCATCCCATTCTATaGCTGAAAATGTTGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQSHPIL*LKMLPR Trigger: CCTGGGCAACATTTTCAGCAATAGAATGGGATGGGA...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATGAAAACTTTTCTGGCTaGCCCTCTTTAACAGAGAAT | + |
Preference number: 5 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYENFSG*PSLTEN Trigger: ATTCTCTGTTAAAGAGGGCAAGCCAGAAAAGTTTTC...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TTTAGGCTGTCCTATCACCAACTCATACAGGACACAATCTTTAGGCTATCCTATATCAGGAAGGAGACCTaGTACCAAATGTTCTTTGTT | + |
Preference number: 5 (lower is better) Translates to: FRLSYHQLIQDTIFRLSYIRKET*YQMFFV Trigger: AACAAAGAACATTTGGTACAAGGTCTCCTTCCTGAT...ATAGGATAGCCTAAAGATTGTGTCCTGTATGAGTTGGTGATAGGACAGCCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTACACACGTGGTCATCTaGGAAAGAAACATGGCAGTA | + |
Preference number: 5 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLTHVVI*ERNMAV Trigger: TACTGCCATGTTTCTTTCCAAGATGACCACGTGTGT...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACTACAACTATTTCTCCTaGAAGCTCTTGGCCCATCTG | + |
Preference number: 5 (lower is better) Translates to: RTQSLGYPILTNVFVYLNYNYFS*KLLAHL Trigger: CAGATGGGCCAAGAGCTTCAAGGAGAAATAGTTGTA...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACTGGTCATATTTAACATaGAGGCGAATGGGCTTTTCA | + |
Preference number: 5 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHWSYLT*RRMGFS Trigger: TGAAAAGCCCATTCGCCTCAATGTTAAATATGACCA...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 90 bp | CTTGCTTCAAGAACTGGCTCAATATCAGACAATAGTTGGGTAGTGTaGCCAAATTCATCCTGTAACTCCAGAGGAATATTAAATGGAACT | + |
Preference number: 5 (lower is better) Translates to: LASRTGSISDNSWVV*PNSSCNSRGILNGT Trigger: AGTTCCATTTAATATTCCTCTGGAGTTACAGGATGAATTTGGTCACACTACCCAACTATTGTCTGATATTGAGCCAGTTCTTGAAGCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | GCTGCTGCATATCTTACTTATATACAGGATACAGTCTTTAGGCTGTCCTATCACAAAGGTCCAATGGCTTaGGCTGTACTTATTTCATTT | + |
Preference number: 5 (lower is better) Translates to: AAAYLTYIQDTVFRLSYHKGPMA*AVLISF Trigger: AAATGAAATAAGTACAGCCAAAGCCATTGGACCTTT...GTGATAGGACAGCCTAAAGACTGTATCCTGTATATAAGTAAGATATGCAGCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTATCTATCAGGGAGCCTaGCCATTTCATCTTCTACAT | + |
Preference number: 5 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLIYQGA*PFHLLH Trigger: ATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGAT...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGACACCTGTGCTTCATCTTTCACAGATGTaGGTACTTGCACATCAGGAA | + |
Preference number: 5 (lower is better) Translates to: SHQCFCVSEHLNSQTPVLHLSQM*VLAHQE Trigger: TTCCTGATGTGCAAGTACCAACATCTGTGAAAGATG...AAGCACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGGACACAATCTTTAGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACCTTTGCTTCTTCAGCTaGGCATTTCATTTCATCCAC | + |
Preference number: 5 (lower is better) Translates to: RTQSLGYPILTNVFVYLNLCFFS*AFHFIH Trigger: GTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAAG...GTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCTAAAGATTGTGTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGGTGCTTCAATATGAGTaGTCTGTTGTGTCGCAGGAA | + |
Preference number: 5 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQVLQYE*SVVSQE Trigger: TTCCTGCGACACAACAGACAACTCATATTGAAGCAC...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTCTGTCACCTCAATCTTaGGTGAGTGACAAAGTGACT | + |
Preference number: 5 (lower is better) Translates to: CRIKAKCCCISYLYTGYSLSPQS*VSDKVT Trigger: AGTCACTTTGTCACTCACCAAAGATTGAGGTGACAG...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 90 bp | GCCTTGAACTCAAAACTATCAGACGCTGTGTTTATATACAATGTCTaGATGTCATCTTGTATTTCCCTTAGGTTGATAATCTTAGGTGTC | + |
Preference number: 5 (lower is better) Translates to: ALNSKLSDAVFIYNV*MSSCISLRLIILGV Trigger: GACACCTAAGATTATCAACCTAAGGGAAATACAAGATGACATGCAGACATTGTATATAAACACAGCGTCTGATAGTTTTGAGTTCAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTCTTCATCCTTTAGCTTaGATGGAAAGCATGGGTCAT | + |
Preference number: 5 (lower is better) Translates to: CRIKAKCCCISYLYTGYSLHPLA*MESMGH Trigger: ATGACCCATGCTTTCCATCAAAGCTAAAGGATGAAG...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | AGGCTATCCTATTCTCACCAATGTTTTTGTGTATCTGAACATTTAAATTCCCAGCTACTGGGAAGTAACTaGATCGTCTTTTCAACAGGT | + |
Preference number: 5 (lower is better) Translates to: RLSYSHQCFCVSEHLNSQLLGSN*IVFSTG Trigger: ACCTGTTGAAAAGACGATCAAGTTACTTCCCAGTAG...CTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAGAATAGGATAGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS-3UTR CAA 90 bp | TGTAGAATTAAAGCCAAGTGCTGCTGCATATCTTACTTATATACAGGATACAGTAAGCGCTGCCATTTGTaGCTGCTTCTTAACATCATT | + |
Preference number: 5 (lower is better) Translates to: CRIKAKCCCISYLYTGYSKRCHL*LLLNII Trigger: AATGATGTTAAGAAGCAGCAACAAATGGCAGCGCTT...ACTGTATCCTGTATATAAGTAAGATATGCAGCAGCACTTGGCTTTAATTCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | TTGGGTCCAGGAGGCCCTGGAGTAAACCTGATGCCTTaGACACTTACGCTCTGTGAGTTGGCCTCCAAGGTG | + |
Preference number: 6 (lower is better) Translates to: LGPGGPGVNLMP*TLTLCELASKV Trigger: CACCTTGGAGGCCAACTCACAGAGCGTAAGTGTGCAAGGCATCAGGTTTACTCCAGGGCCTCCTGGACCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | GAGGCGCAGGTCTTTGACCAAGGTCCTGCTGGCAATTaGACGGACATTAGAAACAGCTGGGGTAGCTGGTTG | + |
Preference number: 6 (lower is better) Translates to: EAQVFDQGPAGN*TDIRNSWGSWL Trigger: CAACCAGCTACCCCAGCTGTTTCTAATGTCCGTTCAATTGCCAGCAGGACCTTGGTCAAAGACCTGCGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | TTTCAGCTCTGGCCAGTCCATAAGCAGCAGCTTGGTTaGAGGTCCAGAAACCAGTTGCACGCGCAGAAAGTC | + |
Preference number: 6 (lower is better) Translates to: FQLWPVHKQQLG*RSRNQLHAQKV Trigger: GACTTTCTGCGCGTGCAACTGGTTTCTGGACCTCCAACCAAGCTGCTGCTTATGGACTGGCCAGAGCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | TGGAGCTCCGAAGACCATTCCCCGAAGTTTGTCCATTaGCGGAGCTTTATTCTGAAGGCCCCCAAACTTCCC | + |
Preference number: 6 (lower is better) Translates to: WSSEDHSPKFVH*RSFILKAPKLP Trigger: GGGAAGTTTGGGGGCCTTCAGAATAAAGCTCCGCCAATGGACAAACTTCGGGGAATGGTCTTCGGAGCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | CTGGAGCTCCGAAGACCATTCCCCGAAGTTTGTCCATaGGCGGAGCTTTATTCTGAAGGCCCCCAAACTTCC | + |
Preference number: 6 (lower is better) Translates to: LELRRPFPEVCP*AELYSEGPQTS Trigger: GGAAGTTTGGGGGCCTTCAGAATAAAGCTCCGCCAATGGACAAACTTCGGGGAATGGTCTTCGGAGCTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | ACAGGAATGGACTCTTTCAGCTCTGGCCAGTCCATAAGCAGCAGCTaGGTTGGAGGTCCAGAAACCAGTTGCACGCGCAGAAAGTCAGAA | + |
Preference number: 6 (lower is better) Translates to: TGMDSFSSGQSISSS*VGGPETSCTRRKSE Trigger: TTCTGACTTTCTGCGCGTGCAACTGGTTTCTGGACCTCCAACCAAGCTGCTGCTTATGGACTGGCCAGAGCTGAAAGAGTCCATTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | ACGCGCAGAAAGTCAGAAAACTCTCGCCAAGTAAAACACAGATCCTaGGGTCCAGGAGGCCCTGGAGTAAACCTGATGCCTTGCACACTT | + |
Preference number: 6 (lower is better) Translates to: TRRKSENSRQVKHRS*GPGGPGVNLMPCTL Trigger: AAGTGTGCAAGGCATCAGGTTTACTCCAGGGCCTCCTGGACCCAAGGATCTGTGTTTTACTTGGCGAGAGTTTTCTGACTTTCTGCGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | TGGCCAGTCCATAAGCAGCAGCTTGGTTGGAGGTCCAGAAACCAGTaGCACGCGCAGAAAGTCAGAAAACTCTCGCCAAGTAAAACACAG | + |
Preference number: 6 (lower is better) Translates to: WPVHKQQLGWRSRNQ*HAQKVRKLSPSKTQ Trigger: CTGTGTTTTACTTGGCGAGAGTTTTCTGACTTTCTGCGCGTGCAACTGGTTTCTGGACCTCCAACCAAGCTGCTGCTTATGGACTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | GCTTTGGTACTGGAGCTCCGAAGACCATTCCCCGAAGTTTGTCCATaGGCGGAGCTTTATTCTGAAGGCCCCCAAACTTCCCATTACTTC | + |
Preference number: 6 (lower is better) Translates to: ALVLELRRPFPEVCP*AELYSEGPQTSHYF Trigger: GAAGTAATGGGAAGTTTGGGGGCCTTCAGAATAAAGCTCCGCCAATGGACAAACTTCGGGGAATGGTCTTCGGAGCTCCAGTACCAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | ACTTTAAGTTCCACCAGCAGCTTCTTTGACCCTCCATaGCTTGTCCCTGGGAGTTTCTGCATTGCTTCCCCC | + |
Preference number: 6 (lower is better) Translates to: TLSSTSSFFDPP*LVPGSFCIASP Trigger: GGGGGAAGCAATGCAGAAACTCCCAGGGACAAGTCATGGAGGGTCAAAGAAGCTGCTGGTGGAACTTAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | CATAAGCAGCAGCTTGGTTGGAGGTCCAGAAACCAGTaGCACGCGCAGAAAGTCAGAAAACTCTCGCCAAGT | + |
Preference number: 6 (lower is better) Translates to: HKQQLGWRSRNQ*HAQKVRKLSPS Trigger: ACTTGGCGAGAGTTTTCTGACTTTCTGCGCGTGCAACTGGTTTCTGGACCTCCAACCAAGCTGCTGCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | CTTGCACACTTACGCTCTGTGAGTTGGCCTCCAAGGTaGTTTTCAAGTTTGAGCTGTCAAGGCCATCTCCAG | + |
Preference number: 6 (lower is better) Translates to: LAHLRSVSWPPR*FSSLSCQGHLQ Trigger: CTGGAGATGGCCTTGACAGCTCAAACTTGAAAATCACCTTGGAGGCCAACTCACAGAGCGTAAGTGTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | CTGCGTGGTACTGGTAATGGCCGGACATACCCTGAGTaGTCAGCAAAGGATTCTGTCCTTCACTCGCATAAT | + |
Preference number: 6 (lower is better) Translates to: LRGTGNGRTYPE*SAKDSVLHSHN Trigger: ATTATGCGAGTGAAGGACAGAATCCTTTGCTGATCACTCAGGGTATGTCCGGCCATTACCAGTACCACGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233872.2 |
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CDS GCA 72 bp | TCTTTCGTCGCCGTCAGTAGTGACTGGTCAACTGACTaGAGCAGGTACAGAGTGACTCCATCTTTAACAGTG | + |
Preference number: 6 (lower is better) Translates to: SFVAVSSDWSTD*SRYRVTPSLTV Trigger: CACTGTTAAAGATGGAGTCACTCTGTACCTGCTGCAGTCAGTTGACCAGTCACTACTGACGGCGACGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127430.2 ENSMUST00000233872.2 |
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CDS GCA 72 bp | ATCTGGATCGCCTTTTGCTCCTCTACACTAAAGATCTaGAGGCAAGCAGCGTGGCTACTGGGAAGTAACTTG | + |
Preference number: 6 (lower is better) Translates to: IWIAFCSSTLKI*RQAAWLLGSNL Trigger: CAAGTTACTTCCCAGTAGCCACGCTGCTTGCCTGCAGATCTTTAGTGTAGAGGAGCAAAAGGCGATCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | TCTTCCATTAATCACAGGAATGGACTCTTTCAGCTCTaGCCAGTCCATAAGCAGCAGCTTGGTTGGAGGTCC | + |
Preference number: 6 (lower is better) Translates to: SSINHRNGLFQL*PVHKQQLGWRS Trigger: GGACCTCCAACCAAGCTGCTGCTTATGGACTGGCCAGAGCTGAAAGAGTCCATTCCTGTGATTAATGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | AGGTTTCTGCATTTGCTGGTGGCCGGCTCATGCCACTaGACAGCTTCCACATTTTCATGGAAATACGTGTTG | + |
Preference number: 6 (lower is better) Translates to: RFLHLLVAGSCH*TASTFSWKYVL Trigger: CAACACGTATTTCCATGAAAATGTGGAAGCTGTCCAGTGGCATGAGCCGGCCACCAGCAAATGCAGAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | GTAGCTGGTTGGCTGTCAGGAACCAACTTCATAGGCTaGTTGGGGAGAACATCAACTATAACCTGTTGGCTG | + |
Preference number: 6 (lower is better) Translates to: VAGWLSGTNFIG*LGRTSTITCWL Trigger: CAGCCAACAGGTTATAGTTGATGTTCTCCCCAACCAGCCTATGAAGTTGGTTCCTGACAGCCAACCAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | GCTGGTTGGCTGTCAGGAACCAACTTCATAGGCTGGTaGGGGAGAACATCAACTATAACCTGTTGGCTGCTT | + |
Preference number: 6 (lower is better) Translates to: AGWLSGTNFIGW*GRTSTITCWLL Trigger: AAGCAGCCAACAGGTTATAGTTGATGTTCTCCCCAACCAGCCTATGAAGTTGGTTCCTGACAGCCAACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | GTAAATAGAATCAAGGGGCAACACTTGCTGGCGACCTaGAGTTTCGTCATAGATAGCGCGTGCGGCATCAGT | + |
Preference number: 6 (lower is better) Translates to: VNRIKGQHLLAT*SFVIDSACGIS Trigger: ACTGATGCCGCACGCGCTATCTATGACGAAACTCAAGGTCGCCAGCAAGTGTTGCCCCTTGATTCTATTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127430.2 ENSMUST00000233839.2 |
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CDS CAA 90 bp | TGCTACCCAAGTAACCTCATCCTGATGTTTGATCTGGATCGCCTTTaGCTCCTCTACACTAAAGATCTGCAGGCAAGCAGCGTGGCTACT | + |
Preference number: 6 (lower is better) Translates to: CYPSNLILMFDLDRL*LLYTKDLQASSVAT Trigger: AGTAGCCACGCTGCTTGCCTGCAGATCTTTAGTGTAGAGGAGCAAAAGGCGATCCAGATCAAACATCAGGATGAGGTTACTTGGGTAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | CCAATCTGGAAGAGTTTTCCTGTAAATAGAATCAAGGGGCAACACTaGCTGGCGACCTTGAGTTTCGTCATAGATAGCGCGTGCGGCATC | + |
Preference number: 6 (lower is better) Translates to: PIWKSFPVNRIKGQH*LATLSFVIDSACGI Trigger: GATGCCGCACGCGCTATCTATGACGAAACTCAAGGTCGCCAGCAAGTGTTGCCCCTTGATTCTATTTACAGGAAAACTCTTCCAGATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127430.2 ENSMUST00000233839.2 |
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CDS TCA 72 bp | CGGATAACCCCTTCCACTACACCGTCTCCTTCAACGTaGGCCTTGAACTCAAAACTATCAGACGCTGTGTTT | + |
Preference number: 6 (lower is better) Translates to: RITPSTTPSPST*ALNSKLSDAVF Trigger: AAACACAGCGTCTGATAGTTTTGAGTTCAAGGCTCACGTTGAAGGAGACGGTGTAGTGGAAGGGGTTATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | AGATCGGCCTCTTCCCTCGAGCTGCTTTCTCGGATATaGAACAGTCATCATCGTCGTCTTCATCCTTTAGCT | + |
Preference number: 6 (lower is better) Translates to: RSASSLELLSRI*NSHHRRLHPLA Trigger: AGCTAAAGGATGAAGACGACGATGATGACTGTTTCATATCCGAGAAAGCAGCTCGAGGGAAGAGGCCGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | GTGCAGTATGACTTTAAGTTCCACCAGCAGCTTCTTTaGCCCTCCATGACTTGTCCCTGGGAGTTTCTGCAT | + |
Preference number: 6 (lower is better) Translates to: VQYDFKFHQQLL*PSMTCPWEFLH Trigger: ATGCAGAAACTCCCAGGGACAAGTCATGGAGGGTCAAAGAAGCTGCTGGTGGAACTTAAAGTCATACTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | TCTGCAGGCAAGCAGCGTGGCTACTGGGAAGTAACTTaGTCGTCTTTTCAACAGGTGACACATCTTTACAGC | + |
Preference number: 6 (lower is better) Translates to: SAGKQRGYWEVT*SSFQQVTHLYS Trigger: GCTGTAAAGATGTGTCACCTGTTGAAAAGACGATCAAGTTACTTCCCAGTAGCCACGCTGCTTGCCTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | GTTAGGGTAACCACACAGTCCATGTCACTTGCCAGATaGCAAGAGATAACCATGGCAGCTCGATCATCTTCA | + |
Preference number: 6 (lower is better) Translates to: VRVTTQSMSLAR*QEITMAARSSS Trigger: TGAAGATGATCGAGCTGCCATGGTTATCTCTTGGCATCTGGCAAGTGACATGGACTGTGTGGTTACCCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | AAGTCAATTCTTTCTTTCGTCGCCGTCAGTAGTGACTaGTCAACTGACTGCAGCAGGTACAGAGTGACTCCA | + |
Preference number: 6 (lower is better) Translates to: KSILSFVAVSSD*STDCSRYRVTP Trigger: TGGAGTCACTCTGTACCTGCTGCAGTCAGTTGACCAGTCACTACTGACGGCGACGAAAGAAAGAATTGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127430.2 ENSMUST00000233872.2 |
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CDS CAA 72 bp | TACTGTAAAGGCGCTCTCCAGACACACGTGGTCATCTaGGAAAGAAACATGGCAGTAGCGGACATCTTTCAC | + |
Preference number: 6 (lower is better) Translates to: YCKGALQTHVVI*ERNMAVADIFH Trigger: GTGAAAGATGTCCGCTACTGCCATGTTTCTTTCCAAGATGACCACGTGTGTCTGGAGAGCGCCTTTACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | GCTGGGGTAGCTGGTTGGCTGTCAGGAACCAACTTCATAGGCTGGTaGGGGAGAACATCAACTATAACCTGTTGGCTGCTTAGAATATTT | + |
Preference number: 6 (lower is better) Translates to: AGVAGWLSGTNFIGW*GRTSTITCWLLRIF Trigger: AAATATTCTAAGCAGCCAACAGGTTATAGTTGATGTTCTCCCCAACCAGCCTATGAAGTTGGTTCCTGACAGCCAACCAGCTACCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | AGCTGCTTGTTGGCATCGAAGAGACTTCTGTACATAGTGATGGACTaGGATAACTCGTCCTTCTCCTTCGTAAGCGCTGCCATTTGTTGC | + |
Preference number: 6 (lower is better) Translates to: SCLLASKRLLYIVMD*DNSSFSFVSAAICC Trigger: GCAACAAATGGCAGCGCTTACGAAGGAGAAGGACGAGTTATCCAAGTCCATCACTATGTACAGAAGTCTCTTCGATGCCAACAAGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | CTGGTAGGTTTGGAGCACCTAGAAACTTACAGTGGACGATCAGCTTaGGTTGTGCTGTTATGTTGTCTGACTCATCCACAACTTCCACCT | + |
Preference number: 6 (lower is better) Translates to: LVGLEHLETYSGRSA*VVLLCCLTHPQLPP Trigger: AGGTGGAAGTTGTGGATGAGTCAGACAACATAACAGCACAACCAAAGCTGATCGTCCACTGTAAGTTTCTAGGTGCTCCAAACCTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | GTGGACGATCAGCTTTGGTTGTGCTGTTATGTTGTCTaGCTCATCCACAACTTCCACCTGAAATGGGAAAGC | + |
Preference number: 6 (lower is better) Translates to: VDDQLWLCCYVV*LIHNFHLKWES Trigger: GCTTTCCCATTTCAGGTGGAAGTTGTGGATGAGTCAGACAACATAACAGCACAACCAAAGCTGATCGTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | CTCCAACACCAAAATAGGAAATGTCACTGTTCAAACTaGGTGGTACTGGTAATGGCCGGACATACCCTGAGT | + |
Preference number: 6 (lower is better) Translates to: LQHQNRKCHCSN*VVLVMAGHTLS Trigger: ACTCAGGGTATGTCCGGCCATTACCAGTACCACGCAGTTTGAACAGTGACATTTCCTATTTTGGTGTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | ATAGACACCTTTAACCTGCACAGTGTGTTCTCCCCTTaGAGCACAAACAGTGAACACCCCCAAATTAGCTCT | + |
Preference number: 6 (lower is better) Translates to: IDTFNLHSVFSP*STNSEHPQISS Trigger: AGAGCTAATTTGGGGGTGTTCACTGTTTGTGCTCCAAGGGGAGAACACACTGTGCAGGTTAAAGGTGTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | GGGAAACTCAAGCGTCCTAACCTTCCCGATGAAGAGTaGGGTATCAGTGTCCTCCTCATTAAAGCCTTTAAT | + |
Preference number: 6 (lower is better) Translates to: GKLKRPNLPDEE*GISVLLIKAFN Trigger: ATTAAAGGCTTTAATGAGGAGGACACTGATACCCCACTCTTCATCGGGAAGGTTAGGACGCTTGAGTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | ATCTGCAGGCAAGCAGCGTGGCTACTGGGAAGTAACTaGATCGTCTTTTCAACAGGTGACACATCTTTACAG | + |
Preference number: 6 (lower is better) Translates to: ICRQAAWLLGSN*IVFSTGDTSLQ Trigger: CTGTAAAGATGTGTCACCTGTTGAAAAGACGATCAAGTTACTTCCCAGTAGCCACGCTGCTTGCCTGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | ACACTAAAGATCTGCAGGCAAGCAGCGTGGCTACTGGGAAGTAACTaGATCGTCTTTTCAACAGGTGACACATCTTTACAGCTAGGTATC | + |
Preference number: 6 (lower is better) Translates to: TLKICRQAAWLLGSN*IVFSTGDTSLQLGI Trigger: GATACCTAGCTGTAAAGATGTGTCACCTGTTGAAAAGACGATCAAGTTACTTCCCAGTAGCCACGCTGCTTGCCTGCAGATCTTTAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | CCCCTTCCACTACACCGTCTCCTTCAACGTGAGCCTTaGACTCAAAACTATCAGACGCTGTGTTTATATACA | + |
Preference number: 6 (lower is better) Translates to: PLPLHRLLQREP*TQNYQTLCLYT Trigger: TGTATATAAACACAGCGTCTGATAGTTTTGAGTTCAAGGCTCACGTTGAAGGAGACGGTGTAGTGGAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | CTTTGCAATGGGCACAGTTTTTATTTCATCATACAGTaGCTGGGGTTCCATGGCAATCTGAACTTCACCTCC | + |
Preference number: 6 (lower is better) Translates to: LCNGHSFYFIIQ*LGFHGNLNFTS Trigger: GGAGGTGAAGTTCAGATTGCCATGGAACCCCAGGCACTGTATGATGAAATAAAAACTGTGCCCATTGCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | GGTATCAGTGTCCTCCTCATTAAAGCCTTTAATGGTTaGTACTACAGTGCCAACCAGATCCATTCCAGTGTG | + |
Preference number: 6 (lower is better) Translates to: GISVLLIKAFNG*YYSANQIHSSV Trigger: CACACTGGAATGGATCTGGTTGGCACTGTAGTAGCAACCATTAAAGGCTTTAATGAGGAGGACACTGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | CAGTTTTTATTTCATCATACAGTGCCTGGGGTTCCATaGCAATCTGAACTTCACCTCCCGTCGCATACACTT | + |
Preference number: 6 (lower is better) Translates to: QFLFHHTVPGVP*QSELHLPSHTL Trigger: AAGTGTATGCGACGGGAGGTGAAGTTCAGATTGCCATGGAACCCCAGGCACTGTATGATGAAATAAAAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | AGAAACATGGCAGTAGCGGACATCTTTCACAGATGTTaGTACTTGCACATCAGGAAGGAGACCTTGTACCAA | + |
Preference number: 6 (lower is better) Translates to: RNMAVADIFHRC*YLHIRKETLYQ Trigger: TTGGTACAAGGTCTCCTTCCTGATGTGCAAGTACCAACATCTGTGAAAGATGTCCGCTACTGCCATGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | CACAGATGTTGGTACTTGCACATCAGGAAGGAGACCTaGTACCAAATGTTCTTTGTTCACCTCAGGAGTCCA | + |
Preference number: 6 (lower is better) Translates to: HRCWYLHIRKET*YQMFFVHLRSP Trigger: TGGACTCCTGAGGTGAACAAAGAACATTTGGTACAAGGTCTCCTTCCTGATGTGCAAGTACCAACATCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | AAGAAACATGGCAGTAGCGGACATCTTTCACAGATGTaGGTACTTGCACATCAGGAAGGAGACCTTGTACCA | + |
Preference number: 6 (lower is better) Translates to: KKHGSSGHLSQM*VLAHQEGDLVP Trigger: TGGTACAAGGTCTCCTTCCTGATGTGCAAGTACCAACATCTGTGAAAGATGTCCGCTACTGCCATGTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | AAGAGTTTTCCTGTAAATAGAATCAAGGGGCAACACTaGCTGGCGACCTTGAGTTTCGTCATAGATAGCGCG | + |
Preference number: 6 (lower is better) Translates to: KSFPVNRIKGQH*LATLSFVIDSA Trigger: CGCGCTATCTATGACGAAACTCAAGGTCGCCAGCAAGTGTTGCCCCTTGATTCTATTTACAGGAAAACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127430.2 ENSMUST00000233839.2 |
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CDS CAA 72 bp | GTACAGAGCAGTGCGATACTGCTGAATAAGATCTATTaGTTTCCCCAAGACCACACACTGCTTTGGTACTGG | + |
Preference number: 6 (lower is better) Translates to: VQSSAILLNKIY*FPQDHTLLWYW Trigger: CCAGTACCAAAGCAGTGTGTGGTCTTGGGGAAACAAATAGATCTTATTCAGCAGTATCGCACTGCTCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | GCAGCTTCTTTGACCCTCCATGACTTGTCCCTGGGAGTTTCTGCATaGCTTCCCCCTTTTTGTTTAGAATTTCAATTCTTAATGCACCGA | + |
Preference number: 6 (lower is better) Translates to: AASLTLHDLSLGVSA*LPPFCLEFQFLMHR Trigger: TCGGTGCATTAAGAATTGAAATTCTAAACAAAAAGGGGGAAGCAATGCAGAAACTCCCAGGGACAAGTCATGGAGGGTCAAAGAAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | CTGCGTGGTACTGGTAATGGCCGGACATACCCTGAGTaGTCACTTTCAAAGTCACCTTGTCTTGTAAATTTT | + |
Preference number: 6 (lower is better) Translates to: LRGTGNGRTYPE*SLSKSPCLVNF Trigger: AAAATTTACAAGACAAGGTGACTTTGAAAGTGATCACTCAGGGTATGTCCGGCCATTACCAGTACCACGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | CCCAAATTAGCTCTGCCCTTATCATCTGTTTTATGCTaGTGGTTTGAAGGTAGTAGCCTTAAGCTGCTTGCT | + |
Preference number: 6 (lower is better) Translates to: PKLALPLSSVLC*WFEGSSLKLLA Trigger: AGCAAGCAGCTTAAGGCTACTACCTTCAAACCAGCAGCATAAAACAGATGATAAGGGCAGAGCTAATTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | ACCCCCAAATTAGCTCTGCCCTTATCATCTGTTTTATaGTGCTGGTTTGAAGGTAGTAGCCTTAAGCTGCTT | + |
Preference number: 6 (lower is better) Translates to: TPKLALPLSSVL*CWFEGSSLKLL Trigger: AAGCAGCTTAAGGCTACTACCTTCAAACCAGCAGCATAAAACAGATGATAAGGGCAGAGCTAATTTGGGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | CTGGCAAGAGTTAACTGGACCTTTAGCTACGACACCTaGAATTACACAATTCGGGCCTTTGGTTATTCCTTC | + |
Preference number: 6 (lower is better) Translates to: LARVNWTFSYDT*NYTIRAFGYSF Trigger: GAAGGAATAACCAAAGGCCCGAATTGTGTAATTCAAGGTGTCGTAGCTAAAGGTCCAGTTAACTCTTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | TTGGAGCACCTAGAAACTTACAGTGGACGATCAGCTTaGGTTGTGCTGTTATGTTGTCTGACTCATCCACAA | + |
Preference number: 6 (lower is better) Translates to: LEHLETYSGRSA*VVLLCCLTHPQ Trigger: TTGTGGATGAGTCAGACAACATAACAGCACAACCAAAGCTGATCGTCCACTGTAAGTTTCTAGGTGCTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | TCAGCTTGGCATTTCATTTCATCCACAAGCTGCTTGTaGGCATCGAAGAGACTTCTGTACATAGTGATGGAC | + |
Preference number: 6 (lower is better) Translates to: SAWHFISSTSCL*ASKRLLYIVMD Trigger: GTCCATCACTATGTACAGAAGTCTCTTCGATGCCAACAAGCAGCTTGTGGATGAAATGAAATGCCAAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | GAAAGAAACATGGCAGTAGCGGACATCTTTCACAGATGTTGGTACTaGCACATCAGGAAGGAGACCTTGTACCAAATGTTCTTTGTTCAC | + |
Preference number: 6 (lower is better) Translates to: ERNMAVADIFHRCWY*HIRKETLYQMFFVH Trigger: GTGAACAAAGAACATTTGGTACAAGGTCTCCTTCCTGATGTGCAAGTACCAACATCTGTGAAAGATGTCCGCTACTGCCATGTTTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | CATCTTGGAAAGAAACATGGCAGTAGCGGACATCTTTCACAGATGTaGGTACTTGCACATCAGGAAGGAGACCTTGTACCAAATGTTCTT | + |
Preference number: 6 (lower is better) Translates to: HLGKKHGSSGHLSQM*VLAHQEGDLVPNVL Trigger: AAGAACATTTGGTACAAGGTCTCCTTCCTGATGTGCAAGTACCAACATCTGTGAAAGATGTCCGCTACTGCCATGTTTCTTTCCAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | TGGCAAGAGTTAACTGGACCTTTAGCTACGACACCTTaGATTACACAATTCGGGCCTTTGGTTATTCCTTCA | + |
Preference number: 6 (lower is better) Translates to: WQELTGPLATTP*ITQFGPLVIPS Trigger: TGAAGGAATAACCAAAGGCCCGAATTGTGTAATTCAAGGTGTCGTAGCTAAAGGTCCAGTTAACTCTTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | TTCTGGCTGATTGCCCAACAAAGAAAACAGCCTGTTTaGCTCCAACACCAAAATAGGAAATGTCACTGTTCA | + |
Preference number: 6 (lower is better) Translates to: FWLIAQQRKQPV*LQHQNRKCHCS Trigger: TGAACAGTGACATTTCCTATTTTGGTGTTGGAGGCAAACAGGCTGTTTTCTTTGTTGGGCAATCAGCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | GACATCTTTCACAGATGTTGGTACTTGCACATCAGGAAGGAGACCTaGTACCAAATGTTCTTTGTTCACCTCAGGAGTCCAATTAACCTT | + |
Preference number: 6 (lower is better) Translates to: DIFHRCWYLHIRKET*YQMFFVHLRSPINL Trigger: AAGGTTAATTGGACTCCTGAGGTGAACAAAGAACATTTGGTACAAGGTCTCCTTCCTGATGTGCAAGTACCAACATCTGTGAAAGATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | TTTGCTTCTTCAGCTTGGCATTTCATTTCATCCACAAGCTGCTTGTaGGCATCGAAGAGACTTCTGTACATAGTGATGGACTTGGATAAC | + |
Preference number: 6 (lower is better) Translates to: FASSAWHFISSTSCL*ASKRLLYIVMDLDN Trigger: GTTATCCAAGTCCATCACTATGTACAGAAGTCTCTTCGATGCCAACAAGCAGCTTGTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | AACTTTGCTTCTTCAGCTTGGCATTTCATTTCATCCACAAGCTGCTaGTTGGCATCGAAGAGACTTCTGTACATAGTGATGGACTTGGAT | + |
Preference number: 6 (lower is better) Translates to: NFASSAWHFISSTSC*LASKRLLYIVMDLD Trigger: ATCCAAGTCCATCACTATGTACAGAAGTCTCTTCGATGCCAACAAGCAGCTTGTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS GCA 72 bp | AATTTTGACAGCCTATACACAGCCCAGTTGTTAAGCTaGTTAGAGGTCATTCCTCTTCCATTATCTACCACT | + |
Preference number: 6 (lower is better) Translates to: NFDSLYTAQLLS*LEVIPLPLSTT Trigger: AGTGGTAGATAATGGAAGAGGAATGACCTCTAAGCAGCTTAACAACTGGGCTGTGTATAGGCTGTCAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | CTTTCCCAAAATATCTCCACTGCGTTTAGTGTAGTTTaGAAGAGTACACAACCTTCTGGGCCTCTTTTTAAG | + |
Preference number: 6 (lower is better) Translates to: LSQNISTAFSVV*KSTQPSGPLFK Trigger: CTTAAAAAGAGGCCCAGAAGGTTGTGTACTCTTCCAAACTACACTAAACGCAGTGGAGATATTTTGGGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | TTGACCCTCCATGACTTGTCCCTGGGAGTTTCTGCATaGCTTCCCCCTTTTTGTTTAGAATTTCAATTCTTA | + |
Preference number: 6 (lower is better) Translates to: LTLHDLSLGVSA*LPPFCLEFQFL Trigger: TAAGAATTGAAATTCTAAACAAAAAGGGGGAAGCAATGCAGAAACTCCCAGGGACAAGTCATGGAGGGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | CCTGCTATAAAAGAGGCATCTTGGTCATATTTAACATaGAGGCGAATGGGCTTTTCAGGGTCTGGAAGAATT | + |
Preference number: 6 (lower is better) Translates to: PAIKEASWSYLT*RRMGFSGSGRI Trigger: AATTCTTCCAGACCCTGAAAAGCCCATTCGCCTCAATGTTAAATATGACCAAGATGCCTCTTTTATAGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | AAGTCACCTTGTCTTGTAAATTTTGACAGCCTATACACAGCCCAGTaGTTAAGCTGCTTAGAGGTCATTCCTCTTCCATTATCTACCACT | + |
Preference number: 6 (lower is better) Translates to: KSPCLVNFDSLYTAQ*LSCLEVIPLPLSTT Trigger: AGTGGTAGATAATGGAAGAGGAATGACCTCTAAGCAGCTTAACAACTGGGCTGTGTATAGGCTGTCAAAATTTACAAGACAAGGTGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | TGTCTTGTAAATTTTGACAGCCTATACACAGCCCAGTaGTTAAGCTGCTTAGAGGTCATTCCTCTTCCATTA | + |
Preference number: 6 (lower is better) Translates to: CLVNFDSLYTAQ*LSCLEVIPLPL Trigger: TAATGGAAGAGGAATGACCTCTAAGCAGCTTAACAACTGGGCTGTGTATAGGCTGTCAAAATTTACAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | TGTATTCTCCTAACACCATTATTTCGAGAAGTAGCTGACAATGAATaGTCGATTAACTCTGCAAGAGCAAATGGCAAAGGATTCTGTCCT | + |
Preference number: 6 (lower is better) Translates to: CILLTPLFREVADNE*SINSARANGKGFCP Trigger: AGGACAGAATCCTTTGCCATTTGCTCTTGCAGAGTTAATCGACAATTCATTGTCAGCTACTTCTCGAAATAATGGTGTTAGGAGAATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 90 bp | TATTGTACGCTTTTAGTTCATTTCGTAGCTGGGTCTCTTTTAACTTaGCTTCTTCAGCTTGGCATTTCATTTCATCCACAAGCTGCTTGT | + |
Preference number: 6 (lower is better) Translates to: YCTLLVHFVAGSLLT*LLQLGISFHPQAAC Trigger: ACAAGCAGCTTGTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAAGTTAAAAGAGACCCAGCTACGAAATGAACTAAAAGCGTACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS TCA 72 bp | AGAACTGGCTCAATATCAGACAATAGTTGGGTAGTGTaGCCAAATTCATCCTGTAACTCCAGAGGAATATTA | + |
Preference number: 6 (lower is better) Translates to: RTGSISDNSWVV*PNSSCNSRGIL Trigger: TAATATTCCTCTGGAGTTACAGGATGAATTTGGTCACACTACCCAACTATTGTCTGATATTGAGCCAGTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CCA 72 bp | CTTCAGATTAAAATTCTTGCCCTGGCAAGAGTTAACTaGACCTTTAGCTACGACACCTTGAATTACACAATT | + |
Preference number: 6 (lower is better) Translates to: LQIKILALARVN*TFSYDTLNYTI Trigger: AATTGTGTAATTCAAGGTGTCGTAGCTAAAGGTCCAGTTAACTCTTGCCAGGGCAAGAATTTTAATCTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | CTAACACCATTATTTCGAGAAGTAGCTGACAATGAATaGTCGATTAACTCTGCAAGAGCAAATGGCAAAGGA | + |
Preference number: 6 (lower is better) Translates to: LTPLFREVADNE*SINSARANGKG Trigger: TCCTTTGCCATTTGCTCTTGCAGAGTTAATCGACAATTCATTGTCAGCTACTTCTCGAAATAATGGTGTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | TTTAAACCAGGAAGAATAACCTTCAGATTAAAATTCTaGCCCTGGCAAGAGTTAACTGGACCTTTAGCTACG | + |
Preference number: 6 (lower is better) Translates to: FKPGRITFRLKF*PWQELTGPLAT Trigger: CGTAGCTAAAGGTCCAGTTAACTCTTGCCAGGGCAAGAATTTTAATCTGAAGGTTATTCTTCCTGGTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | TGCACATCAGGAAGGAGACCTTGTACCAAATGTTCTTaGTTCACCTCAGGAGTCCAATTAACCTTAATTTTT | + |
Preference number: 6 (lower is better) Translates to: CTSGRRPCTKCS*FTSGVQLTLIF Trigger: AAAAATTAAGGTTAATTGGACTCCTGAGGTGAACAAAGAACATTTGGTACAAGGTCTCCTTCCTGATGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |
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CDS CAA 72 bp | CTTTTAGTTCATTTCGTAGCTGGGTCTCTTTTAACTTaGCTTCTTCAGCTTGGCATTTCATTTCATCCACAA | + |
Preference number: 6 (lower is better) Translates to: LLVHFVAGSLLT*LLQLGISFHPQ Trigger: TTGTGGATGAAATGAAATGCCAAGCTGAAGAAGCAAAGTTAAAAGAGACCCAGCTACGAAATGAACTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127430.2 |