Pregenerated sensors for SMC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020608Ensembl transcript IDs: ENSMUST00000020931.6, ENSMUST00000217906.2, ENSMUST00000217930.2, ENSMUST00000218022.2, ENSMUST00000218815.2, ENSMUST00000218866.2
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTACCTGACCACAGGCACTCGCCTTCCCGCTTTCTCCAGCCCTaGTCGACAACTAAGCTGTATTTTCAGGCCTCAATTTCACTTTCA | + |
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Preference number: 1 (lower is better) Translates to: PLPDHRHSPSRFLQP*STTKLYFQASISLS Trigger: TGAAAGTGAAATTGAGGCCTGAAAATACAGCTTAGTTGTCGAGCAGGGCTGGAGAAAGCGGGAAGGCGAGTGCCTGTGGTCAGGTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR GCA 90 bp | TCACAATTCCCCTTCAGTACGAGGCAAGGCACTAAGCTGTCAACTTaGACTGTCATCTTCCTCTTGAGTCACAGGTCGGAAGGGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: SQFPFSTRQGTKLST*TVIFLLSHRSEGQC Trigger: ACACTGCCCTTCCGACCTGTGACTCAAGAGGAAGATGACAGTGCAAGTTGACAGCTTAGTGCCTTGCCTCGTACTGAAGGGGAATTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR GCA 90 bp | TTGAGTGCATGTCTCACTTCTATATCTTCTTTCCTAACTCGGCCATaGTCTTGCTTGTCCTTTTCTATGGCTTGCTCAAACTGCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LSACLTSISSFLTRP*SCLSFSMACSNCSA Trigger: GGCTGAGCAGTTTGAGCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTTAGGAAAGAAGATATAGAAGTGAGACATGCACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR CCA 90 bp | TATGGCAACAATAGGCTTGCAGAAGTCCTTTTAAGCAAGATTCAATaGCCAAAGCAAGTTCAGGGTCCCGTAGATGAATGCAAGCACCTA | + |
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Preference number: 1 (lower is better) Translates to: YGNNRLAEVLLSKIQ*PKQVQGPVDECKHL Trigger: TAGGTGCTTGCATTCATCTACGGGACCCTGAACTTGCTTTGGCCATTGAATCTTGCTTAAAAGGACTTCTGCAAGCCTATTGTTGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR GCA 90 bp | GGACAAAGGAGAAAGCACTTGTCACAGTTGGCAGTGCTTCAAGGCTaGATAAAAGTGTCTAGTGGAGAAGATCTTATAACTGATGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: GQRRKHLSQLAVLQG*IKVSSGEDLITDEV Trigger: CACTTCATCAGTTATAAGATCTTCTCCACTAGACACTTTTATGCAGCCTTGAAGCACTGCCAACTGTGACAAGTGCTTTCTCCTTTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR GCA 90 bp | AACAGAAACCGGATTATCCACCTGGATGTTAAAATGGTCAAGAATTaGAATCAGCTCTTCTTTCCTAGTAGAAACCACGGTGCCTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: NRNRIIHLDVKMVKN*NQLFFPSRNHGAFF Trigger: GAAAAAGGCACCGTGGTTTCTACTAGGAAAGAAGAGCTGATTGCAATTCTTGACCATTTTAACATCCAGGTGGATAATCCGGTTTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR GCA 90 bp | AGCGTCATTAAAGGCTCTTGTCCTTGCAATGACATCTGTTTTCAATaGCATACATTCTGGTGCTCGTGCATTTGTCTCTTCACTAATTTT | + |
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Preference number: 1 (lower is better) Translates to: SVIKGSCPCNDICFQ*HTFWCSCICLFTNF Trigger: AAAATTAGTGAAGAGACAAATGCACGAGCACCAGAATGTATGGCATTGAAAACAGATGTCATTGCAAGGACAAGAGCCTTTAATGACGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR GCA 90 bp | CAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTGCTTTaGAGTATACACACCATTATATCACATAACAGCAACAAACCTGCC | + |
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Preference number: 1 (lower is better) Translates to: QLHCRLCFKHTIHVL*SIHTIISHNSNKPA Trigger: GGCAGGTTTGTTGCTGTTATGTGATATAATGGTGTGTATACTGCAAAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR TCA 90 bp | GCTATGAGTCTAAAGTCTTCTGCTACTTCATATTGTGTGTTTATATaGAAGGTGGCATACTTAGCTCTGAGATATCAAGATAATCAACCC | + |
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Preference number: 1 (lower is better) Translates to: AMSLKSSATSYCVFI*KVAYLALRYQDNQP Trigger: GGGTTGATTATCTTGATATCTCAGAGCTAAGTATGCCACCTTTCATATAAACACACAATATGAAGTAGCAGAAGACTTTAGACTCATAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR GCA 90 bp | TTTACTATCTTTCAGTTCTTTCAATTGTCTCTGATTATAGTTGAGTaGATGTCTCACTTCTATATCTTCTTTCCTAACTCGGCCATGCTC | + |
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Preference number: 1 (lower is better) Translates to: FTIFQFFQLSLIIVE*MSHFYIFFPNSAML Trigger: GAGCATGGCCGAGTTAGGAAAGAAGATATAGAAGTGAGACATGCACTCAACTATAATCAGAGACAATTGAAAGAACTGAAAGATAGTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR GCA 90 bp | TCATGCAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTaGTTTGCAGTATACACACCATTATATCACATAACAGCAACAAAC | + |
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Preference number: 1 (lower is better) Translates to: SCNFTADFVLNTQYM*FAVYTPLYHITATN Trigger: GTTTGTTGCTGTTATGTGATATAATGGTGTGTATACTGCAAAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTGCATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR CAA 90 bp | ACGAGGCAAGGCACTAAGCTGTCAACTTGCACTGTCATCTTCCTCTaGAGTCACAGGTCGGAAGGGCAGTGTGGTTTGCCCTCTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: TRQGTKLSTCTVIFL*SHRSEGQCGLPSFR Trigger: CCTGAAAGAGGGCAAACCACACTGCCCTTCCGACCTGTGACTCAAGAGGAAGATGACAGTGCAAGTTGACAGCTTAGTGCCTTGCCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTACTAGCTCCTCTACCTaGCCACAGGCACTCGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FFIAFDILLKRRQTLLKGTSSST*PQALAF Trigger: GAAGGCGAGTGCCTGTGGTCAGGTAGAGGAGCTAGT...ACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | TACCTGACCACAGGCACTCGCCTTCCCGCTTTCTCCAGCCCTGCTCGACAACTAGAAACAAACCCAAACTaGACAGATATGTACATGTGC | + |
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Preference number: 2 (lower is better) Translates to: YLTTGTRLPAFSSPARQLETNPN*TDMYMC Trigger: GCACATGTACATATCTGTTCAGTTTGGGTTTGTTTC...TAGTTGTCGAGCAGGGCTGGAGAAAGCGGGAAGGCGAGTGCCTGTGGTCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR-3UTR CCA 90 bp | TACCTGACCACAGGCACTCGCCTTCCCGCTTTCTCCAGCCCTGCTCGACAACTAACCGGATTATCCACCTaGATGTTAAAATGGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: YLTTGTRLPAFSSPARQLTGLST*MLKWSR Trigger: TCTTGACCATTTTAACATCCAGGTGGATAATCCGGT...TAGTTGTCGAGCAGGGCTGGAGAAAGCGGGAAGGCGAGTGCCTGTGGTCAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCAGTACGAGGCAAGGCACTAAGCTGTCAACTTGCACTGTCATCTTCCTCTTAAGTCTGACCTGCTaGTCTTCCATTTTCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PFSTRQGTKLSTCTVIFLLSLTC*SSIFLS Trigger: TGACAGGAAAATGGAAGAGCAGCAGGTCAGACTTAA...GAGGAAGATGACAGTGCAAGTTGACAGCTTAGTGCCTTGCCTCGTACTGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCATGCCATACATTCTGGTaGTCGTGCATTTGTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AFTIWPPCHRPKWKLSQPCHTFW*SCICLF Trigger: GAAGAGACAAATGCACGAGCACCAGAATGTATGGCA...TGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR CAA 90 bp | TTCTTTCCTAACTCGGCCATGCTCTTGCTTGTCCTTTTCTATGGCTaGCTCAAACTGCTCAGCCTCCTGATTGACTGTATGTTCCTGATC | + |
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Preference number: 2 (lower is better) Translates to: FFPNSAMLLLVLFYG*LKLLSLLIDCMFLI Trigger: GATCAGGAACATACAGTCAATCAGGAGGCTGAGCAGTTTGAGCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTTAGGAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR CAA 90 bp | TGCATGTCTCACTTCTATATCTTCTTTCCTAACTCGGCCATGCTCTaGCTTGTCCTTTTCTATGGCTTGCTCAAACTGCTCAGCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CMSHFYIFFPNSAML*LVLFYGLLKLLSLL Trigger: CAGGAGGCTGAGCAGTTTGAGCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTTAGGAAAGAAGATATAGAAGTGAGACATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR CAA 90 bp | ACTGTCATCTTCCTCTTGAGTCACAGGTCGGAAGGGCAGTGTGGTTaGCCCTCTTTCAGGGTCAGACATTCGAAGAATTCTAATCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: TVIFLLSHRSEGQCG*PSFRVRHSKNSNQF Trigger: AAACTGATTAGAATTCTTCGAATGTCTGACCCTGAAAGAGGGCAAACCACACTGCCCTTCCGACCTGTGACTCAAGAGGAAGATGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGGTTGCACCCACCAAAAGCTGAGGGCTTTTACAATTTGGCCACCATGCAAACCAGCAATATTTTaGAAACGTTCCTCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PSGCTHQKLRAFTIWPPCKPAIF*KRSSFS Trigger: GGAGAAAGAGGAACGTTTTCAAAATATTGCTGGTTT...GCATGGTGGCCAAATTGTAAAAGCCCTCAGCTTTTGGTGGGTGCAACCACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | AATGCATTGTCTTCGGCAGGAGATGCTCAGGATCTGAGGGCTGCATTTCTCATTCGTCCTGCAAACACTTaGTCACCATCAGCAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: NALSSAGDAQDLRAAFLIRPANT*SPSAVK Trigger: TTTTACTGCTGATGGTGATCAAGTGTTTGCAGGACG...AATGAGAAATGCAGCCCTCAGATCCTGAGCATCTCCTGCCGAAGACAATGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR CAA 90 bp | GTCTCTATGCTCCGCATGTCAATCAGGCTGTTTGCCACAACAGCATaGTCTATTTCTAAAGCTGTCAGAACAGTTGGAAACTCTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: VSMLRMSIRLFATTA*SISKAVRTVGNSGW Trigger: CCATCCAGAGTTTCCAACTGTTCTGACAGCTTTAGAAATAGACAATGCTGTTGTGGCAAACAGCCTGATTGACATGCGGAGCATAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTCAGAATCCACATCTCTaGTTAGAAACTTGGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: FFIAFDILLKRRQTLLKGQNPHL*LETWVL Trigger: CAAGACCCAAGTTTCTAAGCAGAGATGTGGATTCTG...ACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGTGAATGGCACAGGGTATGCGTTCTATACCTCAGGAACGACAGTTCCTGGAAAAGTACAGGTCTaGTTCGAGTTCGACAGATCT | + |
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Preference number: 2 (lower is better) Translates to: KQVNGTGYAFYTSGTTVPGKVQV*FEFDRS Trigger: AGATCTGTCGAACTCGAACCAGACCTGTACTTTTCC...AGGAACTGTCGTTCCTGAGGTATAGAACGCATACCCTGTGCCATTCACTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCAAAATGGTCAAGAATTaGAATCAGCTCTTCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GFYNLATMPQAKVETVTAKMVKN*NQLFFP Trigger: AGGAAAGAAGAGCTGATTGCAATTCTTGACCATTTT...GGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATGAAACAAACCCAAACTaGACAGATATGTACATGTGC | + |
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Preference number: 2 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHETNPN*TDMYMC Trigger: GCACATGTACATATCTGTTCAGTTTGGGTTTGTTTC...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATGCTGGGTTGCTTTCATaGAGAATTTGTATTTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHAGLLS*RICICL Trigger: GAGACAAATACAAATTCTTCATGAAAGCAACCCAGC...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTGGGTGGCTTTTGGGATTGCATGACTGCACGAGCCACAGAATTATTTTTGGGCCGATAGGTTTATaGGTAAATTGTCTCCGTCTG | + |
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Preference number: 2 (lower is better) Translates to: IFGWLLGLHDCTSHRIIFGPIGL*VNCLRL Trigger: CAGACGGAGACAATTTACCCATAAACCTATCGGCCC...AAAAATAATTCTGTGGCTCGTGCAGTCATGCAATCCCAAAAGCCACCCAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATACTGCTTATGGTTGGTaGGGAAAGTTTAAAACAACA | + |
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Preference number: 2 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHTAYGW*GKFKTT Trigger: TGTTGTTTTAAACTTTCCTCACCAACCATAAGCAGT...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATCATGCAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTGCTTCTCTTCCAGAGGTCCTaGATTCAATTCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: LIMQLHCRLCFKHTIHVLLFQRS*IQFPAT Trigger: GGTTGCTGGGAATTGAATTCAGGACCTCTGGAAGAG...AAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTGCATGATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATACAAAGGAGTTATACTaGTTATGGTTGGTGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHTKELY*LWLVRK Trigger: TTTCCTCACCAACCATAAGCAGTATAACTCCTTTGT...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCAAGAATTGCAATCAGCTCTTCTTTCCTAGTAGAAACCACGGTGCCTTTACGCTAATGTGTTGCTaGACAACTATAGAGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: MVKNCNQLFFPSRNHGAFTLMCC*TTIESP Trigger: TGGTGACTCTATAGTTGTGCAGCAACACATTAGCGT...AAAGGCACCGTGGTTTCTACTAGGAAAGAAGAGCTGATTGCAATTCTTGACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217906.2 ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTGTCTCCGTCTGTAAGCATCATCTATTGCTTCCAGAAGAGCTGGAACATGACGCTAATGTGTTGCTaGACAACTATAGAGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: KLSPSVSIIYCFQKSWNMTLMCC*TTIESP Trigger: TGGTGACTCTATAGTTGTGCAGCAACACATTAGCGT...CATGTTCCAGCTCTTCTGGAAGCAATAGATGATGCTTACAGACGGAGACAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTAAGCAAGATAAATTGTCTAAAACGTTGGGAATCTGCCATCTTAAGGATCGTCACCATACACATTTaGTCTGAAGGCATCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: GVSKINCLKRWESAILRIVTIHI*SEGIIS Trigger: GGAGATGATGCCTTCAGAGCAAATGTGTATGGTGAC...GATCCTTAAGATGGCAGATTCCCAACGTTTTAGACAATTTATCTTGCTTACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATAAAGGCTCTTGTCCTTaGAATGACATCTGTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHKGSCP*NDICFQ Trigger: TTGAAAACAGATGTCATTGCAAGGACAAGAGCCTTT...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR GCA 90 bp | CTGATCATGCAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTGCTTGAATGGCACAGGGTATaGGTTCTATACCTCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LIMQLHCRLCFKHTIHVLEWHRV*VLYLRN Trigger: GTTCCTGAGGTATAGAACGCATACCCTGTGCCATTC...AAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTGCATGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR CAA 90 bp | AAGAATTTGTATTTGTCTCCCTCATTTTTGGACTGTAAGAACTGCTaGCTCATCTCTTGTGTTAAAACAGAAACCGGATTATCCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: KNLYLSPSFLDCKNC*LISCVKTETGLSTW Trigger: CCAGGTGGATAATCCGGTTTCTGTTTTAACACAAGAGATGAGCAAGCAGTTCTTACAGTCCAAAAATGAGGGAGACAAATACAAATTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR CAA 90 bp | AGTCACTTATTTCAGAATCCACATCTCTGCTTAGAAACTTGGGTCTaGTACTTTCAGATGAATAATAACGTCCTGCAAACACTTGATCAC | + |
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Preference number: 2 (lower is better) Translates to: SHLFQNPHLCLETWV*YFQMNNNVLQTLDH Trigger: GTGATCAAGTGTTTGCAGGACGTTATTATTCATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAGATGTGGATTCTGAAATAAGTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATCATGCAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTGCTTAGGTTAAAATCCACCTaGACAAATCTGACAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LIMQLHCRLCFKHTIHVLRLKST*TNLTSH Trigger: ATGACTTGTCAGATTTGTTCAGGTGGATTTTAACCT...AAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTGCATGATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATCATGCAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTGCTTAACCCAACTCAGGTTTaGCAGTTTTATGTTATGAAC | + |
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Preference number: 2 (lower is better) Translates to: LIMQLHCRLCFKHTIHVLNPTQV*QFYVMN Trigger: GTTCATAACATAAAACTGTCAAACCTGAGTTGGGTT...AAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTGCATGATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR CAA 90 bp | TCCAACAATTTCTGCTATGAGTCTAAAGTCTTCTGCTACTTCATATaGTGTGTTTATATGAAAGGTGGCATACTTAGCTCTGAGATATCA | + |
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Preference number: 2 (lower is better) Translates to: SNNFCYESKVFCYFI*CVYMKGGILSSEIS Trigger: TGATATCTCAGAGCTAAGTATGCCACCTTTCATATAAACACACAATATGAAGTAGCAGAAGACTTTAGACTCATAGCAGAAATTGTTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| 3UTR TCA 72 bp | CCGGAGGCCAAGCTATCCAGGCTGGCCTTGAACTTGTaGTCTTCTTGCATCTGCCACCCCAGTGGTTGCACC | + |
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Preference number: 3 (lower is better) Translates to: PEAKLSRLALNL*SSCICHPSGCT Trigger: GGTGCAACCACTGGGGTGGCAGATGCAAGAAGATCACAAGTTCAAGGCCAGCCTGGATAGCTTGGCCTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR TCA 72 bp | ATTTTAAGCCGGAGGCCAAGCTATCCAGGCTGGCCTTaGACTTGTGATCTTCTTGCATCTGCCACCCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ILSRRPSYPGWP*TCDLLASATPV Trigger: CACTGGGGTGGCAGATGCAAGAAGATCACAAGTTCAAGGCCAGCCTGGATAGCTTGGCCTCCGGCTTAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| 3UTR-3UTR CAA 90 bp | TACCTGACCACAGGCACTCGCCTTCCCGCTTTCTCCAGCCCTGCTCGACAACTAGACTGTAAGAACTGCTaGCTCATCTCTTGTGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: YLTTGTRLPAFSSPARQLDCKNC*LISCVK Trigger: TTTAACACAAGAGATGAGCAAGCAGTTCTTACAGTC...TAGTTGTCGAGCAGGGCTGGAGAAAGCGGGAAGGCGAGTGCCTGTGGTCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| 3UTR GCA 72 bp | CACCAAAAGCTGAGGGCTTTTACAATTTGGCCACCATaGCACAGGCCAAAGTGGAAACTGTCACAGCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: HQKLRAFTIWPP*HRPKWKLSQPC Trigger: GCATGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCCCTCAGCTTTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | CCCTTCAGTACGAGGCAAGGCACTAAGCTGTCAACTTaGACTGTCATCTTCCTCTTGAGTCACAGGTCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PFSTRQGTKLST*TVIFLLSHRSE Trigger: TTCCGACCTGTGACTCAAGAGGAAGATGACAGTGCAAGTTGACAGCTTAGTGCCTTGCCTCGTACTGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR TCA 72 bp | GATTCAATGGCCAAAGCAAGTTCAGGGTCCCGTAGATaGATGCAAGCACCTAAAGGGCCGATAGGTTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: DSMAKASSGSRR*MQAPKGPIGLW Trigger: CCATAAACCTATCGGCCCTTTAGGTGCTTGCATTCATCTACGGGACCCTGAACTTGCTTTGGCCATTGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCATGGCAAGCAGAGATCTaGCCAGTATCACCAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: AFTIWPPCHRPKWKLSQPWQAEI*PVSPIL Trigger: TAAGATTGGTGATACTGGCAAGATCTCTGCTTGCCA...TGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATTTTCAGGCCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCAAAGCACTTGTCACAGTaGGCAGTGCTTCAAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VFSGLNFTFILSRRPSYPKHLSQ*AVLQGC Trigger: GCAGCCTTGAAGCACTGCCAACTGTGACAAGTGCTT...TGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGGCCTGAAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGGAAGGGCAGTGTGGTTTGCCCTCTTTCAGGGTCAGACATTCGAAGAATTCTTCATCTTCCAAGGTaGCAATATCTACAGATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GRKGSVVCPLSGSDIRRILHLPR*QYLQIG Trigger: ACCAATCTGTAGATATTGCAACCTTGGAAGATGAAG...AATTCTTCGAATGTCTGACCCTGAAAGAGGGCAAACCACACTGCCCTTCCGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCAGTACGAGGCAAGGCACTAAGCTGTCAACTTGCACTGTCATCTTCCTCGGTAAGCAAGATAAATaGTCTAAAACGTTGGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: PFSTRQGTKLSTCTVIFLGKQDK*SKTLGI Trigger: GATTCCCAACGTTTTAGACAATTTATCTTGCTTACC...GAGGAAGATGACAGTGCAAGTTGACAGCTTAGTGCCTTGCCTCGTACTGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATAAGGGAGCTCATGCTTaGAGGGGTAAGCAAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHKGAHA*RGKQDK Trigger: TTTATCTTGCTTACCCCTCAAAGCATGAGCTCCCTT...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR TCA 72 bp | CCATATCCATGTAGACATCAAACTCATCCAGGCATCTaGAAGGTGATTCAGCAATGGACCACAGGGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PYPCRHQTHPGI*KVIQQWTTGKG Trigger: TCCTTTCCCTGTGGTCCATTGCTGAATCACCTTTCAGATGCCTGGATGAGTTTGATGTCTACATGGATATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAGTGAATGGCACAGGGTATGCGTTCTATACCTCAGGAACGACAGTTCCTATTGCTAAGCAGTCTTaGGAAAAGTACAGGTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KQVNGTGYAFYTSGTTVPIAKQS*EKYRSG Trigger: ACCAGACCTGTACTTTTCCAAAGACTGCTTAGCAAT...AGGAACTGTCGTTCCTGAGGTATAGAACGCATACCCTGTGCCATTCACTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| 3UTR TCA 72 bp | ATAATGCATTGTCTTCGGCAGGAGATGCTCAGGATCTaGGGGCTGCATTTCTCATTCTGTAGAAGCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: IMHCLRQEMLRI*GLHFSFCRSTF Trigger: AAATGTGCTTCTACAGAATGAGAAATGCAGCCCTCAGATCCTGAGCATCTCCTGCCGAAGACAATGCATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR TCA 72 bp | CGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTaGAGGGTTATTATGTGGCCCTTTTTATTTTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: RLISFSSADRRC*RVIMWPFLFSI Trigger: GATTGAAAATAAAAAGGGCCACATAATAACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000217930.2 ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | ATTGTCTTCGGCAGGAGATGCTCAGGATCTGAGGGCTaGATTTCTCATTCTGTAGAAGCACATTTAAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: IVFGRRCSGSEG*ISHSVEAHLKL Trigger: TAGTTTTAAATGTGCTTCTACAGAATGAGAAATGCAGCCCTCAGATCCTGAGCATCTCCTGCCGAAGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | ACTTCTATATCTTCTTTCCTAACTCGGCCATGCTCTTaGTTGTCCTTTTCTATGGCTTGCTCAAACTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSISSFLTRPCS*LSFSMACSNCS Trigger: TGAGCAGTTTGAGCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTTAGGAAAGAAGATATAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | TGTCTCACTTCTATATCTTCTTTCCTAACTCGGCCATaGTCTTGCTTGTCCTTTTCTATGGCTTGCTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CLTSISSFLTRP*SCLSFSMACSN Trigger: GTTTGAGCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTTAGGAAAGAAGATATAGAAGTGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | ATGGGTAAATTGTCTCCGTCTGTAAGCATCATCTATTaGTTCCAGAAGAGCTGGAACATGAGGACCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: MGKLSPSVSIIY*FQKSWNMRTKS Trigger: AGATTTGGTCCTCATGTTCCAGCTCTTCTGGAAGCAATAGATGATGCTTACAGACGGAGACAATTTACCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCAACCAGTATTATGAAATaGGTTTTCACAAGGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: YCLQQEMLGSEGFISHNATSIMK*VFTRNS Trigger: GCTGTTCCTTGTGAAAACCAATTTCATAATACTGGT...TGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR TCA 72 bp | AGGAAAACCAAATGTAGAGTGAATTATAAGTGTTCCTaGCAGTACCTGCCCATGCTGATCATGCAACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RKTKCRVNYKCS*QYLPMLIMQLH Trigger: GTGAAGTTGCATGATCAGCATGGGCAGGTACTGTCAGGAACACTTATAATTCACTCTACATTTGGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| 3UTR GCA 72 bp | CGGATTATCCACCTGGATGTTAAAATGGTCAAGAATTaGAATCAGCTCTTCTTTCCTAGTAGAAACCACGGT | + |
|
Preference number: 3 (lower is better) Translates to: RIIHLDVKMVKN*NQLFFPSRNHG Trigger: ACCGTGGTTTCTACTAGGAAAGAAGAGCTGATTGCAATTCTTGACCATTTTAACATCCAGGTGGATAATCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTGCATTTCTCATTCTGTAGAAGCACATTTAAAACTACCACAAAAACTCAAAAGCTGTCAGAACAGTaGGAAACTCTGGATGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLHFSFCRSTFKTTTKTQKLSEQ*ETLDGK Trigger: CTTACCATCCAGAGTTTCCAACTGTTCTGACAGCTT...TTGAGTTTTTGTGGTAGTTTTAAATGTGCTTCTACAGAATGAGAAATGCAGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | GGTAAGCAAGATAAATTGTCTAAAACGTTGGGAATCTaGCATCTTAAGGATCATGTCCATCGCAATTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GKQDKLSKTLGI*HLKDHVHRNSP Trigger: AGGAGAATTGCGATGGACATGATCCTTAAGATGGCAGATTCCCAACGTTTTAGACAATTTATCTTGCTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR TCA 72 bp | TCTCTAAGTTCAGGGTGTAGCTTATATCATCTCACATaGGATGTATATTTTGACTCAATAGCCACTAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLSSGCSLYHLT*DVYFDSIATSS Trigger: GGAGCTAGTGGCTATTGAGTCAAAATATACATCTCATGTGAGATGATATAAGCTACACCCTGAACTTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | ATTTGTCTCCCTCATTTTTGGACTGTAAGAACTGCTTaGTCATCTCTTGTGTTAAAACAGAAACCGGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: ICLPHFWTVRTA*SSLVLKQKPDY Trigger: ATAATCCGGTTTCTGTTTTAACACAAGAGATGAGCAAGCAGTTCTTACAGTCCAAAAATGAGGGAGACAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR GCA 72 bp | ATTTCCAACAATTTCTGCTATGAGTCTAAAGTCTTCTaGTACTTCATATTGTGTGTTTATATGAAAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISNNFCYESKVF*YFILCVYMKGG Trigger: GCCACCTTTCATATAAACACACAATATGAAGTAGCAGAAGACTTTAGACTCATAGCAGAAATTGTTGGAAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR TCA 90 bp | TACCTGACCACAGGCACTCGCCTTCCCGCTTTCTCCAGCCCTGCTCGACAACTAGCTCAGCCTCCTGATTaGCTGTATGTTCCTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLTTGTRLPAFSSPARQLAQPPD*LYVPDP Trigger: AGGATCAGGAACATACAGTCAATCAGGAGGCTGAGC...TAGTTGTCGAGCAGGGCTGGAGAAAGCGGGAAGGCGAGTGCCTGTGGTCAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| 3UTR CAA 72 bp | GGCACTAAGCTGTCAACTTGCACTGTCATCTTCCTCTaGAGTCACAGGTCGGAAGGGCAGTGTGGTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTKLSTCTVIFL*SHRSEGQCGLP Trigger: GGGCAAACCACACTGCCCTTCCGACCTGTGACTCAAGAGGAAGATGACAGTGCAAGTTGACAGCTTAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCGCAGCACTGTCTCTATaGTCCGCATGTCAATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQSASVSRHFIHQSSYPLAALSL*SACQSG Trigger: GCCTGATTGACATGCGGAGCATAGAGACAGTGCTGC...GAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCAAGGGCAGTGTGGTTTaGCCTCTTTCAGGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQSASVSRHFIHQSSYPLKGSVV*PLSGSD Trigger: GTCTGACCCTGAAAGAGGGCAAACCACACTGCCCTT...GAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCGTCGGAAGGGCAGTGTaGTTTGCCCTCTTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFQSASVSRHFIHQSSYPVGRAV*FALFQG Trigger: ACCCTGAAAGAGGGCAAACCACACTGCCCTTCCGAC...GGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| 3UTR CAA 72 bp | TGGTTGCACCCACCAAAAGCTGAGGGCTTTTACAATTaGGCCACCATGCCACAGGCCAAAGTGGAAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLHPPKAEGFYN*ATMPQAKVETV Trigger: GACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCCCTCAGCTTTTGGTGGGTGCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCCATACACATTTGCTCTaGAGGCATCATCTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFHTHLL*RHHLLC Trigger: ACAGAGGAGATGATGCCTTCAGAGCAAATGTGTATG...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGGCATCTGAAAGGTaGTTCAGCAATGGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSSFISECLCLTPFHPPVQASER*FSNGPQ Trigger: CTGTGGTCCATTGCTGAATCACCTTTCAGATGCCTG...GACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCACTCATCCAGGCATCTaGAAGGTGATTCAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GFYNLATMPQAKVETVTATHPGI*KVIQQW Trigger: CCATTGCTGAATCACCTTTCAGATGCCTGGATGAGT...GGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GGAGGCCAAGCTATCCAGGCTGGCCTTGAACTTGTGATCTTCTTGCATCTGCCAGTCACCATACACATTTaGTCTGAAGGCATCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQAIQAGLELVIFLHLPVTIHI*SEGIIS Trigger: GGAGATGATGCCTTCAGAGCAAATGTGTATGGTGAC...TGGCAGATGCAAGAAGATCACAAGTTCAAGGCCAGCCTGGATAGCTTGGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTTATTATGTGGCCCTTTTTGCAGCACTGTCTCTATaGTCCGCATGTCAATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLKRRQTLLKGYYVALFAALSL*SACQSG Trigger: GCCTGATTGACATGCGGAGCATAGAGACAGTGCTGC...AAAAAGGGCCACATAATAACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTTATTATGTGGCCCTTTTTGGTGGCTTTTGGGATTaGATGACTGCACGAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ILLKRRQTLLKGYYVALFGGFWD*MTARAT Trigger: TGTGGCTCGTGCAGTCATGCAATCCCAAAAGCCACC...AAAAAGGGCCACATAATAACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| 3UTR CAA 72 bp | TTCCTCTTGAGTCACAGGTCGGAAGGGCAGTGTGGTTaGCCCTCTTTCAGGGTCAGACATTCGAAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLSHRSEGQCG*PSFRVRHSKNS Trigger: AGAATTCTTCGAATGTCTGACCCTGAAAGAGGGCAAACCACACTGCCCTTCCGACCTGTGACTCAAGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| CDS-3UTR TCA 90 bp | AATGCATTGTCTTCGGCAGGAGATGCTCAGGATCTGAGGGCTGCATTTCTCATTAAGCACGCATGTCATTaGAGGAGGCTTTGTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NALSSAGDAQDLRAAFLIKHACH*RRLCSP Trigger: AGGGGAACAAAGCCTCCTTCAATGACATGCGTGCTT...AATGAGAAATGCAGCCCTCAGATCCTGAGCATCTCCTGCCGAAGACAATGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GGAGGCCAAGCTATCCAGGCTGGCCTTGAACTTGTGATCTTCTTGCATCTGCCATCTGTTAGTAGCAACTaGTTTTCCACCAAGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGQAIQAGLELVIFLHLPSVSSN*FSTKTN Trigger: GTTGGTCTTGGTGGAAAAGCAGTTGCTACTAACAGA...TGGCAGATGCAAGAAGATCACAAGTTCAAGGCCAGCCTGGATAGCTTGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCAGCTGTCAGAACAGTTaGAAACTCTGGATGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFYNLATMPQAKVETVTASCQNS*KLWMVS Trigger: GCTTACCATCCAGAGTTTCCAACTGTTCTGACAGCT...GGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| 3UTR CAA 72 bp | AACTCGGCCATGCTCTTGCTTGTCCTTTTCTATGGCTaGCTCAAACTGCTCAGCCTCCTGATTGACTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NSAMLLLVLFYG*LKLLSLLIDCM Trigger: CATACAGTCAATCAGGAGGCTGAGCAGTTTGAGCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCGGTCCAAGCATTGAATaGCACATGAAATTTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFGPSIE*HMKFLS Trigger: GCTAAGAAATTTCATGTGTCATTCAATGCTTGGACC...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR TCA 90 bp | TATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCCGTCCTGCAAACACTTaGTCACCATCAGCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFRVPLSHAISSTSPVIPRPANT*SPSAVK Trigger: TTTTACTGCTGATGGTGATCAAGTGTTTGCAGGACG...GGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | GCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCATCTAATCAGTTTACTTaGGGGAAGGGAGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFTIWPPCHRPKWKLSQPSNQFT*GKGAHA Trigger: AGCATGAGCTCCCTTCCCTCAAGTAAACTGATTAGA...TGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCTATTCCAACTTCTGCTaGAGTCAAAGTAGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFYSNFC*SQSRCS Trigger: GGAACATCTACTTTGACTGCAGCAGAAGTTGGAATA...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCCTGTTCGAGCTGGGTTaGTTTCATGAAGAATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFLFELG*FHEEFV Trigger: TACAAATTCTTCATGAAAGCAACCCAGCTCGAACAG...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCCAAGCTATCCAGGCTGGCCTTGAACTTGTGATCTTCTTGCATCTGCCATTTCCTGTCAAGTTTTaGAGCACGTTCTTCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGQAIQAGLELVIFLHLPFPVKF*STFFSN Trigger: ATTGGAGAAGAACGTGCTGCAAAACTTGACAGGAAA...TGGCAGATGCAAGAAGATCACAAGTTCAAGGCCAGCCTGGATAGCTTGGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | AATGCATTGTCTTCGGCAGGAGATGCTCAGGATCTGAGGGCTGCATTTCTCATTTCCTTTTCTATGGCTTaGTCAAACTGCTCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NALSSAGDAQDLRAAFLISFSMA*SNCSAS Trigger: GGAGGCTGAGCAGTTTGAGCAAGCCATAGAAAAGGA...AATGAGAAATGCAGCCCTCAGATCCTGAGCATCTCCTGCCGAAGACAATGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTGGTGGCTTTTGGGATTaGATGACTGCACGAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGFLGLFTQAMSDVKGAPGGFWD*MTARAT Trigger: TGTGGCTCGTGCAGTCATGCAATCCCAAAAGCCACC...AGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCCAGAATCCACATCTCTaGTTAGAAACTTGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQSASVSRHFIHQSSYPLQNPHL*LETWVL Trigger: CAAGACCCAAGTTTCTAAGCAGAGATGTGGATTCTG...GAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | ATGAGTGATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATAAGGGCAGTGTGGTTTaGCCTCTTTCAGGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MSDVKGAPLFQSASVSRHKGSVV*PLSGSD Trigger: GTCTGACCCTGAAAGAGGGCAAACCACACTGCCCTT...ATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATCACTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCGATGAGTGATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCAAGACACAATTATCTGTaGCCGAGAGGTCCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAMSDVKGAPLFQSASVSRHNYL*PRGPWW Trigger: CCACCAGGGACCTCTCGGCCACAGATAATTGTGTCT...TGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATCACTCATCGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTGCTTTCCTCGTTTCTaGCTATCCACTTCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFISECLCLTPFHPPVQCFPRF*LSTSES Trigger: TGACTCTGAAGTGGATAGCCAGAAACGAGGAAAGCA...CTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCGGTCCAAGCATTGAATaGCACATGAAATTTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFYNLATMPQAKVETVTAGPSIE*HMKFLS Trigger: GCTAAGAAATTTCATGTGTCATTCAATGCTTGGACC...GGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCACAAAACCAGCAATATTTTaGAAACGTTCCTCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSASVSRHFIHQSSYPLTKPAIF*KRSSFS Trigger: GGAGAAAGAGGAACGTTTTCAAAATATTGCTGGTTT...TGTGAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTCGTCCTGCAAACACTTaGTCACCATCAGCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFIAFDILLKRRQTLLKGRPANT*SPSAVK Trigger: TTTTACTGCTGATGGTGATCAAGTGTTTGCAGGACG...ACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCACTCATCCAGGCATCTaGAAGGTGATTCAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKELLYFRVPLSHAISSTTHPGI*KVIQQW Trigger: CCATTGCTGAATCACCTTTCAGATGCCTGGATGAGT...GGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCCAGGCATCTGAAAGGTaGTTCAGCAATGGACCACAN | + |
|
Preference number: 4 (lower is better) Translates to: LKELLYFRVPLSHAISSTQASER*FSNGPX Trigger: NTGTGGTCCATTGCTGAATCACCTTTCAGATGCCTG...GGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218815.2 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCTATTCCAACTTCTGCTaGAGTCAAAGTAGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQSASVSRHFIHQSSYPLYSNFC*SQSRCS Trigger: GGAACATCTACTTTGACTGCAGCAGAAGTTGGAATA...GAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCTCTACAATTTTTGGGTaGCTTTTGGGATTGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQSASVSRHFIHQSSYPLSTIFG*LLGLHD Trigger: GTCATGCAATCCCAAAAGCCACCCAAAAATTGTAGA...GAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCCCCGATCTCCATGACTaGCATGTTCTGCCTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LKELLYFRVPLSHAISSTPDLHD*HVLPEF Trigger: AAATTCAGGCAGAACATGCCAGTCATGGAGATCGGG...GGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | CCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCAGGCTGGCCTTGGCTGGGTTGCTTTCATaGAGAATTTGTATTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQFHFHFKPEAKLSRLALAGLLS*RICICL Trigger: GAGACAAATACAAATTCTTCATGAAAGCAACCCAGC...CAAGGCCAGCCTGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTAAGACCAACTATGAGTaGGGTGAGCACAGCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGFLGLFTQAMSDVKGAPKTNYE*GEHSTL Trigger: AAGAGTGCTGTGCTCACCGCACTCATAGTTGGTCTT...AGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCAAAATGGTCAAGAATTaGAATCAGCTCTTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFKMVKN*NQLFFP Trigger: AGGAAAGAAGAGCTGATTGCAATTCTTGACCATTTT...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCAACATTCTGGTGCTCGTaGATTTGTCTCTTCACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFTIWPPCHRPKWKLSQPTFWCS*ICLFTN Trigger: ATTAGTGAAGAGACAAATGCACGAGCACCAGAATGT...TGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCACTCGGCCATGCTCTTaGTTGTCCTTTTCTATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DVKGAPLFQSASVSRHFITRPCS*LSFSMA Trigger: AGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGT...GATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAAGGTAGGTTTCTCTTaGTTCTTGATACTGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GAPLFQSASVSRHFIHQSKVGFS*FLILLH Trigger: ATGAAGCAGTATCAAGAAGCAAGAGAAACCTACCTT...GGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | CCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCAGGCTGGCCTTGTTCATCTGTTCGAGCTaGGTTGCTTTCATGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQFHFHFKPEAKLSRLALFICSS*VAFMKN Trigger: ATTCTTCATGAAAGCAACCCAGCTCGAACAGATGAA...CAAGGCCAGCCTGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGTGATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATGGGCCGATAGGTTTATaGGTAAATTGTCTCCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSDVKGAPLFQSASVSRHGPIGL*VNCLRL Trigger: CAGACGGAGACAATTTACCCATAAACCTATCGGCCC...ATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATCACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | TACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCAAACAGTTGGAAACTCTaGATGGTAAGCAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCLQQEMLGSEGFISHNANSWKL*MVSSSE Trigger: CTCAGAGCTGCTTACCATCCAGAGTTTCCAACTGTT...TGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | AAGAAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAGCTGTCAGAACAGTTaGAAACTCTGGATGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKFFIAFDILLKRRQTLLSCQNS*KLWMVS Trigger: GCTTACCATCCAGAGTTTCCAACTGTTCTGACAGCT...CAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAACTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTAACAGTTGGAAACTCTaGATGGTAAGCAGCTCTGAN | + |
|
Preference number: 4 (lower is better) Translates to: FFIAFDILLKRRQTLLKGNSWKL*MVSSSX Trigger: NTCAGAGCTGCTTACCATCCAGAGTTTCCAACTGTT...ACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| 3UTR CAA 72 bp | GCACTGTCTCTATGCTCCGCATGTCAATCAGGCTGTTaGCCACAACAGCATTGTCTATTTCTAAAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSLCSACQSGC*PQQHCLFLKLS Trigger: TGACAGCTTTAGAAATAGACAATGCTGTTGTGGCAAACAGCCTGATTGACATGCGGAGCATAGAGACAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCGTTTTTCAATTTCATTaGCCACTGCCCAAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFQSASVSRHFIHQSSYPVFQFH*PLPKPF Trigger: AAATGGCTTGGGCAGTGGTCAATGAAATTGAAAAAC...GGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATCTCTTGTCCTTGCAATaGCATCTGTTTTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHLLSLQ*HLFSMP Trigger: TGGCATTGAAAACAGATGTCATTGCAAGGACAAGAG...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTAGGGAGCTCATGCTTTaGGGGGTAAGCAAGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGFLGLFTQAMSDVKGAPRELML*GVSKIN Trigger: ATTTATCTTGCTTACCCCTCAAAGCATGAGCTCCCT...AGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGTGATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATAGGGAGCTCATGCTTTaGGGGGTAAGCAAGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MSDVKGAPLFQSASVSRHRELML*GVSKIN Trigger: ATTTATCTTGCTTACCCCTCAAAGCATGAGCTCCCT...ATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATCACTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCACAAGCGAGACAAATCAACAGTCCAAGCCTCAGATAGGGTTATTTCAGTCACCATACACATTTaGTCTGAAGGCATCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVHKRDKSTVQASDRVISVTIHI*SEGIIS Trigger: GGAGATGATGCCTTCAGAGCAAATGTGTATGGTGAC...TGAAATAACCCTATCTGAGGCTTGGACTGTTGATTTGTCTCGCTTGTGGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCACTGTAAGAACTGCTTaGTCATCTCTTGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAPLFQSASVSRHFIHQSTVRTA*SSLVLK Trigger: TTTTAACACAAGAGATGAGCAAGCAGTTCTTACAGT...GGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCTTCCTAACTCGGCCATaGTCTTGCTTGTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DVKGAPLFQSASVSRHFIFLTRP*SCLSFS Trigger: AGAAAAGGACAAGCAAGAGCATGGCCGAGTTAGGAA...GATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | TACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCAGTAAGCATCATCTATTaGTTCCAGAAGAGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YCLQQEMLGSEGFISHNAVSIIY*FQKSWN Trigger: GTTCCAGCTCTTCTGGAAGCAATAGATGATGCTTAC...TGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGAAAACGTTGGGAATCTaGCATCTTAAGGATCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGAPLFQSASVSRHFIHQKTLGI*HLKDHV Trigger: GACATGATCCTTAAGATGGCAGATTCCCAACGTTTT...CTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR CCA 90 bp | GATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCTGCTTCCAGAAGAGCTaGAACATGAGGACCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DVKGAPLFQSASVSRHFICFQKS*NMRTKS Trigger: AGATTTGGTCCTCATGTTCCAGCTCTTCTGGAAGCA...GATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | GCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCAAATTGTCTAAAACGTTaGGAATCTGCCATCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFTIWPPCHRPKWKLSQPNCLKR*ESAILR Trigger: CCTTAAGATGGCAGATTCCCAACGTTTTAGACAATT...TGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| 3UTR CAA 72 bp | CACTTCTATATCTTCTTTCCTAACTCGGCCATGCTCTaGCTTGTCCTTTTCTATGGCTTGCTCAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFYIFFPNSAML*LVLFYGLLKLL Trigger: GAGCAGTTTGAGCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTTAGGAAAGAAGATATAGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCAGGCCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCACATACACATTTGCTCTaGAGGCATCATCTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSGLNFTFILSRRPSYPHTHLL*RHHLLC Trigger: ACAGAGGAGATGATGCCTTCAGAGCAAATGTGTATG...TGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGGCCTGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | AAACAAGTGAATGGCACAGGGTATGCGTTCTATACCTCAGGAACGACAGTTCCTGCTGGGTTGCTTTCATaGAGAATTTGTATTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQVNGTGYAFYTSGTTVPAGLLS*RICICL Trigger: GAGACAAATACAAATTCTTCATGAAAGCAACCCAGC...AGGAACTGTCGTTCCTGAGGTATAGAACGCATACCCTGTGCCATTCACTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGTGAATGGCACAGGGTATGCGTTCTATACCTCAGGAACGACAGTTCCTGTTTTTCAATTTCATTaGCCACTGCCCAAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KQVNGTGYAFYTSGTTVPVFQFH*PLPKPF Trigger: AAATGGCTTGGGCAGTGGTCAATGAAATTGAAAAAC...AGGAACTGTCGTTCCTGAGGTATAGAACGCATACCCTGTGCCATTCACTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR TCA 90 bp | TACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCACCACAGAATTATTTTTaGTCAGCAGCACTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YCLQQEMLGSEGFISHNAPQNYF*SAALSL Trigger: TAGAGACAGTGCTGCTGATCAAAAATAATTCTGTGG...TGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR TCA 90 bp | AAGAAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGCCACAGAATTATTTTTaGTCAGCAGCACTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KKFFIAFDILLKRRQTLLPQNYF*SAALSL Trigger: TAGAGACAGTGCTGCTGATCAAAAATAATTCTGTGG...CAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAACTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCGTTTCTCTTGCTTCTTaGTACTGCTTCATTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFQSASVSRHFIHQSSYPVSLAS*YCFIIS Trigger: GGAAATAATGAAGCAGTATCAAGAAGCAAGAGAAAC...GGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCACGCTAATGTGTTGCTaGACAACTATAGAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DVKGAPLFQSASVSRHFITLMCC*TTIESP Trigger: TGGTGACTCTATAGTTGTGCAGCAACACATTAGCGT...GATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCACAAGCGAGACAAATCAACAGTCCAAGCCTCAGATAGGGTTATTTCAACGCTAATGTGTTGCTaGACAACTATAGAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TVHKRDKSTVQASDRVISTLMCC*TTIESP Trigger: TGGTGACTCTATAGTTGTGCAGCAACACATTAGCGT...TGAAATAACCCTATCTGAGGCTTGGACTGTTGATTTGTCTCGCTTGTGGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATCTGTTCGAGCTGGGTTaGTTTCATGAAGAATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHLFELG*FHEEFV Trigger: TACAAATTCTTCATGAAAGCAACCCAGCTCGAACAG...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGAATTTCATTGACCACTaGCCAAGCCATTTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGAPLFQSASVSRHFIHQNFIDH*PSHFMF Trigger: AAACATGAAATGGCTTGGGCAGTGGTCAATGAAATT...CTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTTTAAGTCTGACCTGCTaGTCTTCCATTTTCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGFLGLFTQAMSDVKGAPLSLTC*SSIFLS Trigger: TGACAGGAAAATGGAAGAGCAGCAGGTCAGACTTAA...AGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTTTGGGATTGCATGACTaGACGAGCCACAGAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: AGFLGLFTQAMSDVKGAPLGLHD*TSHRII Trigger: AATAATTCTGTGGCTCGTGCAGTCATGCAATCCCAA...AGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | TTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCAATTGTCTAAAACGTTaGGAATCTGCCATCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFQSASVSRHFIHQSSYPNCLKR*ESAILR Trigger: CCTTAAGATGGCAGATTCCCAACGTTTTAGACAATT...GGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR TCA 90 bp | GATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCGGTCCAAGCATTGAATaGCACATGAAATTTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVKGAPLFQSASVSRHFIGPSIE*HMKFLS Trigger: GCTAAGAAATTTCATGTGTCATTCAATGCTTGGACC...GATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGTGAATGGCACAGGGTATGCGTTCTATACCTCAGGAACGACAGTTCCTAAACCAGCAATATTTTaGAAACGTTCCTCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQVNGTGYAFYTSGTTVPKPAIF*KRSSFS Trigger: GGAGAAAGAGGAACGTTTTCAAAATATTGCTGGTTT...AGGAACTGTCGTTCCTGAGGTATAGAACGCATACCCTGTGCCATTCACTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTTTATCTAATCAGTTTACTTaGGGGAAGGGAGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLGLFTQAMSDVKGAPLSNQFT*GKGAHA Trigger: AGCATGAGCTCCCTTCCCTCAAGTAAACTGATTAGA...TAAAGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTTTATGCCATACATTCTGGTaGTCGTGCATTTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFLGLFTQAMSDVKGAPLCHTFW*SCICLF Trigger: GAAGAGACAAATGCACGAGCACCAGAATGTATGGCA...TAAAGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | ATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCGGATTATCCACCTaGATGTTAAAATGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MLKELLYFRVPLSHAISSTGLST*MLKWSR Trigger: TCTTGACCATTTTAACATCCAGGTGGATAATCCGGT...GGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCACAAGCGAGACAAATCAACAGTCCAAGCCTCAGATAGGGTTATTTCATTCATCTGTTCGAGCTaGGTTGCTTTCATGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVHKRDKSTVQASDRVISFICSS*VAFMKN Trigger: ATTCTTCATGAAAGCAACCCAGCTCGAACAGATGAA...TGAAATAACCCTATCTGAGGCTTGGACTGTTGATTTGTCTCGCTTGTGGACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCTCTTTCTCCAAACACTaGCGTTTTAGTTCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKELLYFRVPLSHAISSTSFSKH*RFSSVS Trigger: ACTTACTGAACTAAAACGCCAGTGTTTGGAGAAAGA...GGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CCA 90 bp | GCGCAGACAGACGCTGCTGAAGGGTTATTATGTGGCCCTTTTTATTTTCAATCTTCTACAATTTTTGGGTaGCTTTTGGGATTGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQTDAAEGLLCGPFYFQSSTIFG*LLGLHD Trigger: GTCATGCAATCCCAAAAGCCACCCAAAAATTGTAGA...AGATTGAAAATAAAAAGGGCCACATAATAACCCTTCAGCAGCGTCTGTCTGCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| 3UTR CAA 72 bp | ATAGTTAAAGGACAAAGGAGAAAGCACTTGTCACAGTaGGCAGTGCTTCAAGGCTGCATAAAAGTGTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVKGQRRKHLSQ*AVLQGCIKVSS Trigger: ACTAGACACTTTTATGCAGCCTTGAAGCACTGCCAACTGTGACAAGTGCTTTCTCCTTTGTCCTTTAACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| 3UTR CAA 72 bp | CTGTTTCAAATGACAGTTGCAATTGCTAAGCAGTCTTaGGAAAAGTACAGGTCTGGTTCGAGTTCGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFQMTVAIAKQS*EKYRSGSSSTD Trigger: ATCTGTCGAACTCGAACCAGACCTGTACTTTTCCAAAGACTGCTTAGCAATTGCAACTGTCATTTGAAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| 3UTR CAA 72 bp | AGCAGTAAAAGCTTCTCTACAATTTTTGGGTGGCTTTaGGGATTGCATGACTGCACGAGCCACAGAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSFSTIFGWL*GLHDCTSHRII Trigger: AATAATTCTGTGGCTCGTGCAGTCATGCAATCCCAAAAGCCACCCAAAAATTGTAGAGAAGCTTTTACTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR CAA 72 bp | AAGGGAGCTCATGCTTTGAGGGGTAAGCAAGATAAATaGTCTAAAACGTTGGGAATCTGCCATCTTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGAHALRGKQDK*SKTLGICHLKD Trigger: ATCCTTAAGATGGCAGATTCCCAACGTTTTAGACAATTTATCTTGCTTACCCCTCAAAGCATGAGCTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| CDS-3UTR GCA 90 bp | AAAATGGTCAAGAATTGCAATCAGCTCTTCTTTCCTAGTAGAAACCACGGTGCCTATTCCAACTTCTGCTaGAGTCAAAGTAGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMVKNCNQLFFPSRNHGAYSNFC*SQSRCS Trigger: GGAACATCTACTTTGACTGCAGCAGAAGTTGGAATA...GGCACCGTGGTTTCTACTAGGAAAGAAGAGCTGATTGCAATTCTTGACCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| CDS-3UTR GCA 90 bp | CTGATCATGCAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTGCTTAAGACCAACTATGAGTaGGGTGAGCACAGCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIMQLHCRLCFKHTIHVLKTNYE*GEHSTL Trigger: AAGAGTGCTGTGCTCACCGCACTCATAGTTGGTCTT...AAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTGCATGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTTTAGACATCTGTTTTCAATaGCATACATTCTGGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GFLGLFTQAMSDVKGAPLDICFQ*HTFWCS Trigger: CGAGCACCAGAATGTATGGCATTGAAAACAGATGTC...TAAAGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR GCA 90 bp | ATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCAAAGGCTCTTGTCCTTaGAATGACATCTGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MLKELLYFRVPLSHAISSKGSCP*NDICFQ Trigger: TTGAAAACAGATGTCATTGCAAGGACAAGAGCCTTT...GGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGAAGGGTTATTATGTGGCCCTTTTTATTTTCAATCTCAGTCTCCAAGTTTGGGATTGCATGACTaGACGAGCCACAGAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: AAEGLLCGPFYFQSQSPSLGLHD*TSHRII Trigger: AATAATTCTGTGGCTCGTGCAGTCATGCAATCCCAA...ACTTGGAGACTGAGATTGAAAATAAAAAGGGCCACATAATAACCCTTCAGCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCAGGCCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCACTCTGCTTAGAAACTTaGGTCTTGTACTTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VFSGLNFTFILSRRPSYPLCLET*VLYFQM Trigger: CATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAG...TGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGGCCTGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CCA 90 bp | GCACCTTTTAAGAAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGCTCTGCTTAGAAACTTaGGTCTTGTACTTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: APFKKFFIAFDILLKRRQLCLET*VLYFQM Trigger: CATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAG...CTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAACTTCTTAAAAGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTTTAAGAAGAGCTGGAACATaGGGACCAAATCTTTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GFLGLFTQAMSDVKGAPLRRAGT*GPNLFS Trigger: ACTAAAAAGATTTGGTCCTCATGTTCCAGCTCTTCT...TAAAGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR GCA 90 bp | GCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTAATTATTCCAACTTCTaGTGCAGTCAAAGTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AGFLGLFTQAMSDVKGAPNYSNF*CSQSRC Trigger: ACATCTACTTTGACTGCAGCAGAAGTTGGAATAATT...AGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGTTGGCACCTTTTAAGAAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCCAGAATCCACATCTCTaGTTAGAAACTTGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSWHLLRSSSLRLISFSSQNPHL*LETWVL Trigger: CAAGACCCAAGTTTCTAAGCAGAGATGTGGATTCTG...GCTTGAGAAGGATATCAAACGCAATGAAGAACTTCTTAAAAGGTGCCAACTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR GCA 90 bp | CAAGGAACAGCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAAAAACGTTGGGAATCTaGCATCTTAAGGATCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGTAGFLGLFTQAMSDVKKTLGI*HLKDHV Trigger: GACATGATCCTTAAGATGGCAGATTCCCAACGTTTT...TTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGCTGTTCCTTG 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
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| CDS-3UTR CCA 90 bp | GGGCTGCATTTCTCATTCTGTAGAAGCACATTTAAAACTACCACAAAAACTCAACAATGCCATACATTCTaGTGCTCGTGCATTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLHFSFCRSTFKTTTKTQQCHTF*CSCICL Trigger: GAGACAAATGCACGAGCACCAGAATGTATGGCATTG...TTGAGTTTTTGTGGTAGTTTTAAATGTGCTTCTACAGAATGAGAAATGCAGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | CTTCCATCCACGCTAATGTGTTGCTGCACAACTATAGAGTCACCATACACATTTAATTATTCCAACTTCTaGTGCAGTCAAAGTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSTLMCCCTTIESPYTFNYSNF*CSQSRC Trigger: ACATCTACTTTGACTGCAGCAGAAGTTGGAATAATT...AAATGTGTATGGTGACTCTATAGTTGTGCAGCAACACATTAGCGTGGATGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTCAGATAGGGTTATTTCAGCCAAACACAATTCTGTTTCAAATGACAGTTTCTGTTAGTAGCAACTaGTTTTCCACCAAGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPQIGLFQPNTILFQMTVSVSSN*FSTKTN Trigger: GTTGGTCTTGGTGGAAAAGCAGTTGCTACTAACAGA...AACTGTCATTTGAAACAGAATTGTGTTTGGCTGAAATAACCCTATCTGAGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTTTAAAAATGGTCAAGAATTaGAATCAGCTCTTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLGLFTQAMSDVKGAPLKMVKN*NQLFFP Trigger: AGGAAAGAAGAGCTGATTGCAATTCTTGACCATTTT...TAAAGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR GCA 90 bp | AAGCCTCAGATAGGGTTATTTCAGCCAAACACAATTCTGTTTCAAATGACAGTTTTTCCTGTCAAGTTTTaGAGCACGTTCTTCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KPQIGLFQPNTILFQMTVFPVKF*STFFSN Trigger: ATTGGAGAAGAACGTGCTGCAAAACTTGACAGGAAA...AACTGTCATTTGAAACAGAATTGTGTTTGGCTGAAATAACCCTATCTGAGGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCTCAGATAGGGTTATTTCAGCCAAACACAATTCTGTTTCAAATGACAGTTACCGGATTATCCACCTaGATGTTAAAATGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPQIGLFQPNTILFQMTVTGLST*MLKWSR Trigger: TCTTGACCATTTTAACATCCAGGTGGATAATCCGGT...AACTGTCATTTGAAACAGAATTGTGTTTGGCTGAAATAACCCTATCTGAGGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| 3UTR CAA 72 bp | TATTTGTCTCCCTCATTTTTGGACTGTAAGAACTGCTaGCTCATCTCTTGTGTTAAAACAGAAACCGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: YLSPSFLDCKNC*LISCVKTETGL Trigger: TAATCCGGTTTCTGTTTTAACACAAGAGATGAGCAAGCAGTTCTTACAGTCCAAAAATGAGGGAGACAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR CAA 72 bp | TTTCAGAATCCACATCTCTGCTTAGAAACTTGGGTCTaGTACTTTCAGATGAATAATAACGTCCTGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FQNPHLCLETWV*YFQMNNNVLQT Trigger: TGTTTGCAGGACGTTATTATTCATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAGATGTGGATTCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| 3UTR CAA 72 bp | TCCTTACTTTATTATCCAGATCAAGGTAGGTTTCTCTaGCTTCTTGATACTGCTTCATTATTTCCTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYYPDQGRFL*LLDTASLFPPD Trigger: ATCGGGAGGAAATAATGAAGCAGTATCAAGAAGCAAGAGAAACCTACCTTGATCTGGATAATAAAGTAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218022.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCTCAGATAGGGTTATTTCAGCCAAACACAATTCTGTTTCAAATGACAGTTAATTTCATTGACCACTaGCCAAGCCATTTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPQIGLFQPNTILFQMTVNFIDH*PSHFMF Trigger: AAACATGAAATGGCTTGGGCAGTGGTCAATGAAATT...AACTGTCATTTGAAACAGAATTGTGTTTGGCTGAAATAACCCTATCTGAGGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR GCA 90 bp | CTGATCATGCAACTTCACTGCAGACTTTGTTTTAAACACACAATACATGTGCTTACTGTAAGAACTGCTTaGTCATCTCTTGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIMQLHCRLCFKHTIHVLTVRTA*SSLVLK Trigger: TTTTAACACAAGAGATGAGCAAGCAGTTCTTACAGT...AAGCACATGTATTGTGTGTTTAAAACAAAGTCTGCAGTGAAGTTGCATGATCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTGGTTGCACCCACCAAAAGCTGAGGGCTTTTACAATTTGGCCACCATGCGGGTGGCTTTTGGGATaGCATGACTGCACGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSGCTHQKLRAFTIWPPCGWLLG*HDCTSH Trigger: GTGGCTCGTGCAGTCATGCAATCCCAAAAGCCACCC...GCATGGTGGCCAAATTGTAAAAGCCCTCAGCTTTTGGTGGGTGCAACCACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CAA 90 bp | TACCTGACCACAGGCACTCGCCTTCCCGCTTTCTCCAGCCCTGCTCGACAACTAACGTCCTGCAAACACTaGATCACCATCAGCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLTTGTRLPAFSSPARQLTSCKH*ITISSK Trigger: TTTACTGCTGATGGTGATCAAGTGTTTGCAGGACGT...TAGTTGTCGAGCAGGGCTGGAGAAAGCGGGAAGGCGAGTGCCTGTGGTCAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CAA 90 bp | TATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCGAAGGGCAGTGTGGTTaGCCCTCTTTCAGGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YFRVPLSHAISSTSPVIPEGQCG*PSFRVR Trigger: TCTGACCCTGAAAGAGGGCAAACCACACTGCCCTTC...GGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCAGGCTGGCCTTGCGGCCATGCTCTTGCTaGTCCTTTTCTATGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQFHFHFKPEAKLSRLALRPCSC*SFSMAC Trigger: GCAAGCCATAGAAAAGGACAAGCAAGAGCATGGCCG...CAAGGCCAGCCTGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCCTGGGCAGATCTGTCTaGCCTGTGACATTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GFYNLATMPQAKVETVTALGRSV*PVTFSP Trigger: AGGAGAAAATGTCACAGGCAAGACAGATCTGCCCAG...GGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
||
| CDS-3UTR CAA 90 bp | TTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCGAAGGGCAGTGTGGTTaGCCCTCTTTCAGGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFQSASVSRHFIHQSSYPEGQCG*PSFRVR Trigger: TCTGACCCTGAAAGAGGGCAAACCACACTGCCCTTC...GGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR CAA 90 bp | TATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCACTGTCATCTTCCTCTaGAGTCACAGGTCGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YFRVPLSHAISSTSPVIPTVIFL*SHRSEG Trigger: CCCTTCCGACCTGTGACTCAAGAGGAAGATGACAGT...GGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCAGGCTGGCCTTGAACTCGGCCATGCTCTaGCTTGTCCTTTTCTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQFHFHFKPEAKLSRLALNSAML*LVLFYG Trigger: GCCATAGAAAAGGACAAGCAAGAGCATGGCCGAGTT...CAAGGCCAGCCTGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS GCA 90 bp | CCCTCTGTTAGTAGCAACTGCTTTTCCACCAAGACCAACTATGAGTaGGGTGAGCACAGCACTCTTCCCACTTCCATTATTGCCAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSVSSNCFSTKTNYE*GEHSTLPTSIIANN Trigger: GTTGTTGGCAATAATGGAAGTGGGAAGAGTGCTGTGCTCACCGCACTCATAGTTGGTCTTGGTGGAAAAGCAGTTGCTACTAACAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218866.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCACAGCCACAGAATTATTTTaGATCAGCAGCACTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSASVSRHFIHQSSYPLTATELF*ISSTVS Trigger: AGAGACAGTGCTGCTGATCAAAAATAATTCTGTGGC...TGTGAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCGACTGTAAGAACTGCTaGCTCATCTCTTGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFDCKNC*LISCVK Trigger: TTTAACACAAGAGATGAGCAAGCAGTTCTTACAGTC...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCTGTTTTTCAATTTCATaGACCACTGCCCAAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFCFSIS*TTAQAI Trigger: AATGGCTTGGGCAGTGGTCAATGAAATTGAAAAACA...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| CDS-3UTR CAA 90 bp | TACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCAGTCCTTTTCTATGGCTaGCTCAAACTGCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YCLQQEMLGSEGFISHNAVLFYG*LKLLSL Trigger: GAGGCTGAGCAGTTTGAGCAAGCCATAGAAAAGGAC...TGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | CAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCACATTTGCCACAACAGCATaGTCTATTTCTAAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QSASVSRHFIHQSSYPLTFATTA*SISKAV Trigger: GACAGCTTTAGAAATAGACAATGCTGTTGTGGCAAA...TGTGAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | AGTTGGCACCTTTTAAGAAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGGGTGGCTTTTGGGATaGCATGACTGCACGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SWHLLRSSSLRLISFSSAGWLLG*HDCTSH Trigger: GTGGCTCGTGCAGTCATGCAATCCCAAAAGCCACCC...TGCGCTTGAGAAGGATATCAAACGCAATGAAGAACTTCTTAAAAGGTGCCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | CCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCAGGCTGGCCTTGGCTTCTCTACAATTTTaGGGTGGCTTTTGGGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQFHFHFKPEAKLSRLALASLQF*GGFWDC Trigger: GCAATCCCAAAAGCCACCCAAAAATTGTAGAGAAGC...CAAGGCCAGCCTGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | ATGAGTGATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATACTGTCATCTTCCTCTaGAGTCACAGGTCGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MSDVKGAPLFQSASVSRHTVIFL*SHRSEG Trigger: CCCTTCCGACCTGTGACTCAAGAGGAAGATGACAGT...ATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATCACTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGCTCAGCTGTTAGGAGCACTGACTTCTCTTCCAGAGGTCCTGAATTCTTGCCAACAACAAAGTaGACGTTAGAACCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: TPGSAVRSTDFSSRGPEFLPTTK*TLEPNL Trigger: TAAGTTTGGTTCTAACGTCAACTTTGTTGTTGGCAA...GAATTCAGGACCTCTGGAAGAGAAGTCAGTGCTCCTAACAGCTGAGCCTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCACAATGACTGTAAGAACTGCTaGCTCATCTCTTGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ECLCLTPFHPPVQLSPHNDCKNC*LISCVK Trigger: TTTAACACAAGAGATGAGCAAGCAGTTCTTACAGTC...ATTGTGAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | GCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCATTTTCCTGTCAAGTTTaGCAGCACGTTCTTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AFTIWPPCHRPKWKLSQPFSCQV*QHVLLQ Trigger: TTGGAGAAGAACGTGCTGCAAAACTTGACAGGAAAA...TGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | TATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCAGGTTTATGGGTAAATaGTCTCCGTCTGTAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YFRVPLSHAISSTSPVIPRFMGK*SPSVSI Trigger: GATGCTTACAGACGGAGACAATTTACCCATAAACCT...GGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | CCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTTATTATGTGGCCCTTTTTATAAGCTGTCAGAACAGTaGGAAACTCTGGATGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSQAQTDAAEGLLCGPFYKLSEQ*ETLDGK Trigger: CTTACCATCCAGAGTTTCCAACTGTTCTGACAGCTT...ATAAAAAGGGCCACATAATAACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | GCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGGTTATTATGTGGCTTCTCTACAATTTTaGGGTGGCTTTTGGGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: AFDILLKRRQTLLKGYYVASLQF*GGFWDC Trigger: GCAATCCCAAAAGCCACCCAAAAATTGTAGAGAAGC...CACATAATAACCCTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | GATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCAAAGCACGCATGTCATaGAAGGAGGCTTTGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DVKGAPLFQSASVSRHFIKARMS*KEALFP Trigger: GGGGAACAAAGCCTCCTTCAATGACATGCGTGCTTT...GATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | TTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCTGTAAGCATCATCTATaGCTTCCAGAAGAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFQSASVSRHFIHQSSYPCKHHL*LPEELE Trigger: TTCCAGCTCTTCTGGAAGCAATAGATGATGCTTACA...GGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | CAAGCGATGAGTGATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCAATTTTTGGGTGGCTTTaGGGATTGCATGACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: QAMSDVKGAPLFQSASVSIFGWL*GLHDCT Trigger: CGTGCAGTCATGCAATCCCAAAAGCCACCCAAAAAT...TGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATCACTCATCGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | GAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCCTCACAATAAATTGTCTAAAACGTaGGGAATCTGCCATCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ECLCLTPFHPPVQLSPHNKLSKT*GICHLK Trigger: CTTAAGATGGCAGATTCCCAACGTTTTAGACAATTT...ATTGTGAGGGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCGGTAAGCAAGATAAATaGTCTAAAACGTTGGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: GFYNLATMPQAKVETVTAGKQDK*SKTLGI Trigger: GATTCCCAACGTTTTAGACAATTTATCTTGCTTACC...GGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | GCTTTTACAATTTGGCCACCATGCCACAGGCCAAAGTGGAAACTGTCACAGCCATTGCCAACAACAAAGTaGACGTTAGAACCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: AFTIWPPCHRPKWKLSQPLPTTK*TLEPNL Trigger: TAAGTTTGGTTCTAACGTCAACTTTGTTGTTGGCAA...TGGCTGTGACAGTTTCCACTTTGGCCTGTGGCATGGTGGCCAAATTGTAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| CDS-3UTR CAA 90 bp | AAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGGCCACAGAATTATTTTaGATCAGCAGCACTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KFFIAFDILLKRRQTLLKATELF*ISSTVS Trigger: AGAGACAGTGCTGCTGATCAAAAATAATTCTGTGGC...CTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | GCGCAGACAGACGCTGCTGAAGGGTTATTATGTGGCCCTTTTTATTTTCAATCTACGTCCTGCAAACACTaGATCACCATCAGCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AQTDAAEGLLCGPFYFQSTSCKH*ITISSK Trigger: TTTACTGCTGATGGTGATCAAGTGTTTGCAGGACGT...AGATTGAAAATAAAAAGGGCCACATAATAACCCTTCAGCAGCGTCTGTCTGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | TTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCCAGTTATCCCTCTCTGCTTAGAAACTaGGGTCTTGTACTTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFQSASVSRHFIHQSSYPSLLRN*GLVLSD Trigger: ATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAGA...GGGATAACTGGACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | AGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCCACCAGTCGGTAAGCAAGATAAATaGTCTAAAACGTTGGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: RSSFISECLCLTPFHPPVGKQDK*SKTLGI Trigger: GATTCCCAACGTTTTAGACAATTTATCTTGCTTACC...GACTGGTGGATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
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| CDS-3UTR CAA 90 bp | GATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATTTCATCAAGGGAGCTCATGCTTaGAGGGGTAAGCAAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: DVKGAPLFQSASVSRHFIKGAHA*RGKQDK Trigger: TTTATCTTGCTTACCCCTCAAAGCATGAGCTCCCTT...GATGAAATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
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| CDS-3UTR CAA 90 bp | AATGCATTGTCTTCGGCAGGAGATGCTCAGGATCTGAGGGCTGCATTTCTCATTTTGCCAACAACAAAGTaGACGTTAGAACCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: NALSSAGDAQDLRAAFLILPTTK*TLEPNL Trigger: TAAGTTTGGTTCTAACGTCAACTTTGTTGTTGGCAA...AATGAGAAATGCAGCCCTCAGATCCTGAGCATCTCCTGCCGAAGACAATGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218022.2 |
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| CDS-3UTR CAA 90 bp | ACTGTCTTCAGCAGGAGATGCTCGGATCTGAGGGTTTCATTTCCCATAATGCATTGTTTTTCAATTTCATaGACCACTGCCCAAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TVFSRRCSDLRVSFPIMHCFSIS*TTAQAI Trigger: AATGGCTTGGGCAGTGGTCAATGAAATTGAAAAACA...ATGCATTATGGGAAATGAAACCCTCAGATCCGAGCATCTCCTGCTGAAGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | GTATTTTCAGGCCTCAATTTCACTTTCATTTTAAGCCGGAGGCCAAGCTATCCAAAGCTGTCAGAACAGTaGGAAACTCTGGATGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFSGLNFTFILSRRPSYPKLSEQ*ETLDGK Trigger: CTTACCATCCAGAGTTTCCAACTGTTCTGACAGCTT...TGGATAGCTTGGCCTCCGGCTTAAAATGAAAGTGAAATTGAGGCCTGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | AAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCGCAGACAGACGCTGCTGAAGTTTGCCACAACAGCATaGTCTATTTCTAAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KFFIAFDILLKRRQTLLKFATTA*SISKAV Trigger: GACAGCTTTAGAAATAGACAATGCTGTTGTGGCAAA...CTTCAGCAGCGTCTGTCTGCGCTTGAGAAGGATATCAAACGCAATGAAGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | TGTAGTTGGCACCTTTTAAGAAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCATTTTTGGGTGGCTTTaGGGATTGCATGACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: CSWHLLRSSSLRLISFSSIFGWL*GLHDCT Trigger: CGTGCAGTCATGCAATCCCAAAAGCCACCCAAAAAT...GCTTGAGAAGGATATCAAACGCAATGAAGAACTTCTTAAAAGGTGCCAACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | GCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAGGAGCTCCTCTTCATCTTCCAAGGTaGCAATATCTACAGATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGFLGLFTQAMSDVKGAPLHLPR*QYLQIG Trigger: ACCAATCTGTAGATATTGCAACCTTGGAAGATGAAG...AGGAGCTCCTTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020931.6 |
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| CDS-3UTR CAA 90 bp | CAAGGAACAGCTGGCTTTCTAGGCTTATTTACACAAGCGATGAGTGATGTTAAAAAGGGAGCTCATGCTTaGAGGGGTAAGCAAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGTAGFLGLFTQAMSDVKKGAHA*RGKQDK Trigger: TTTATCTTGCTTACCCCTCAAAGCATGAGCTCCCTT...TTTAACATCACTCATCGCTTGTGTAAATAAGCCTAGAAAGCCAGCTGTTCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
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| CDS-3UTR CAA 90 bp | ATGAGTGATGTTAAAGGAGCTCCTTTATTTCAGAGTGCCTCTGTCTCACGCCATAAATTGTCTAAAACGTaGGGAATCTGCCATCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: MSDVKGAPLFQSASVSRHKLSKT*GICHLK Trigger: CTTAAGATGGCAGATTCCCAACGTTTTAGACAATTT...ATGGCGTGAGACAGAGGCACTCTGAAATAAAGGAGCTCCTTTAACATCACTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218815.2 |
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| CDS-3UTR CAA 90 bp | AGTTGGCACCTTTTAAGAAGTTCTTCATTGCGTTTGATATCCTTCTCAAGCGCATCTCTGCTTAGAAACTaGGGTCTTGTACTTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SWHLLRSSSLRLISFSSASLLRN*GLVLSD Trigger: ATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAGA...TGCGCTTGAGAAGGATATCAAACGCAATGAAGAACTTCTTAAAAGGTGCCAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS-3UTR CAA 90 bp | AAGCCTCAGATAGGGTTATTTCAGCCAAACACAATTCTGTTTCAAATGACAGTTTTTTCCTGTCAAGTTTaGCAGCACGTTCTTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KPQIGLFQPNTILFQMTVFSCQV*QHVLLQ Trigger: TTGGAGAAGAACGTGCTGCAAAACTTGACAGGAAAA...AACTGTCATTTGAAACAGAATTGTGTTTGGCTGAAATAACCCTATCTGAGGCTT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000218866.2 |
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| CDS GCA 72 bp | AGTAGCAACTGCTTTTCCACCAAGACCAACTATGAGTaGGGTGAGCACAGCACTCTTCCCACTTCCATTATT | + |
|
Preference number: 6 (lower is better) Translates to: SSNCFSTKTNYE*GEHSTLPTSII Trigger: AATAATGGAAGTGGGAAGAGTGCTGTGCTCACCGCACTCATAGTTGGTCTTGGTGGAAAAGCAGTTGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020931.6 ENSMUST00000218866.2 |
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| CDS CAA 90 bp | TGTTCCTTATTTCAGAATCCACATCTCTGCTTAGAAACTTGGGTCTaGTACTTTCAGATGAATAATAACGTCCTGCAAACACTTGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: CSLFQNPHLCLETWV*YFQMNNNVLQTLDH Trigger: GTGATCAAGTGTTTGCAGGACGTTATTATTCATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAGATGTGGATTCTGAAATAAGGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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| CDS GCA 72 bp | CATATATCTTGTTCCTTATTTCAGAATCCACATCTCTaGTTAGAAACTTGGGTCTTGTACTTTCAGATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HISCSLFQNPHL*LETWVLYFQMN Trigger: ATTCATCTGAAAGTACAAGACCCAAGTTTCTAAGCAGAGATGTGGATTCTGAAATAAGGAACAAGATATATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217930.2 |
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